Citrus Sinensis ID: 018900

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYSN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHHcccEEEEEccccccccccccccccccccccccccEEEEccHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHcccccEEccccccEEEEEEHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHccccccEEEccccccccccccccccccccEEccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccEEcccccccccccccccccccccccccccHcHHccccHHHHcccccccccccccHHHHHccccccEEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHcccccEEEccHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHccccEEEEEEEcHEcccccccccccccccccccccHHHHHHHHHccccEEEEEEEEEEcccccccHHHHHHHHHHcccccEcccccccEEEEEEHHHHHHHHHHHHHccccccccEEEEcccccEcHHHHHHHHHHHHcccccEEEcccccccccccccccccHcHccccccc
Coil and Loop (DISEMBL)
matlassssslllssppsklaqaslppslrlsfssySHLSslvsispssflacpassrrssvsaFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKEllgsghevtimtvgdensdkmkkppfnrFNEIVsaggktvwgdpaevgnvvGGVTFDVVldnngknldavrpvadwakssgvkQFLFISsagiykpadepphvegdvvkpdaghVQVEKYISENfsnwasfrpqymigsgnnkdceEWFFDRivrkrpvpipgsgmqftniahvRDLSSMLTlavenpeaassNIFNLVSDRAVTLDGMAKLCAQAaglpveivhydpkaagidakkafpfrnMVFIFFYSN
Flexible Loop (DISEMBL)
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVkasaaekkkvlivntnsgghAVIGFYLAKELLGSGHEVTIMTVgdensdkmkkpPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYSN
Low Complexity Region (SEG)
MATlassssslllssppsklaqaslppslrlsfssyshlsslvsispssflACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYSN
Disordered region (IsUnstruct)
************************************************************************EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV************FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP********GDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFY**
Disordered Region (DISOPRED)
***************************************************************************KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS*
Disordered Region (DISEMBL)
**************************PSLRLSFSSYSHLSSLVSISPSS*******************ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYSN
Disordered Region (DISPRO)
**********************************************PSSFLACP******************EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYSN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYSN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
Q9LYA9	406	Chloroplast stem-loop bin	yes	no	0.825	0.709	0.820	1e-138
Q9SA52	378	Chloroplast stem-loop bin	no	no	0.762	0.703	0.380	6e-45

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  490 bits (1262), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/289 (82%), Positives = 253/289 (87%), Gaps = 1/289 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct: 60  TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
           GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEAAS NIFN
Sbjct: 240 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 299

Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
            VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAF FRNM F
Sbjct: 300 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHF 348

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  181 bits (460), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 156/284 (54%), Gaps = 18/284 (6%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           SA+ +KK+LI+    GG   IG +L++ L+  GH+VT+ T G   S   K+ P     + 
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102

Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                K +   GD  +   V   ++   FDVV D NG+  + V P+ +      ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160

Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
            SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G  N   
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
            EEWFF R+   RP+P+P SG+Q + + HV+DL++   L V   E AS  IFN+  ++ V
Sbjct: 221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 279

Query: 302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVFI 344
           T DG+AK CA+A G P  EIVHY+PK      KKAFPFR+  F 
Sbjct: 280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFF 323

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
224066507	404	predicted protein [Populus trichocarpa]	0.842	0.727	0.870	1e-148
224082634	377	predicted protein [Populus trichocarpa]	0.836	0.774	0.866	1e-147
225436924	397	PREDICTED: uncharacterized protein At3g6	0.822	0.722	0.844	1e-141
343172517	384	chloroplast stem-loop binding protein, p	0.856	0.778	0.813	1e-141
343172519	384	chloroplast stem-loop binding protein, p	0.856	0.778	0.813	1e-141
32746733	405	mRNA-binding protein precursor, partial	0.825	0.711	0.826	1e-139
449444637	409	PREDICTED: chloroplast stem-loop binding	0.819	0.699	0.825	1e-138
255559448	398	NAD dependent epimerase/dehydratase, put	0.853	0.748	0.856	1e-138
357440743	401	MRNA-binding protein [Medicago truncatul	0.977	0.850	0.730	1e-137
297821230	408	hypothetical protein ARALYDRAFT_486816 [	0.825	0.705	0.820	1e-137

>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/294 (87%), Positives = 267/294 (90%)

Query: 50  FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
           F A P  SRR   S+FTVKASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGHEVTI+T
Sbjct: 53  FAAQPICSRRLFTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILT 112

Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP 169
           VG+E+SDKMKKPPF+RF+EIVSAGGKTVWG+PAEVG VV G  FDVVLDNNGK+LDAVRP
Sbjct: 113 VGEESSDKMKKPPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRP 172

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
           V DWAKS+GVKQFLFISSAGIYK  DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FR
Sbjct: 173 VVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFR 232

Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
           PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH RDLSSMLTLAVENPEAAS
Sbjct: 233 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEAAS 292

Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
             IFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK  GIDAKKAFPFRNM F
Sbjct: 293 GRIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHF 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa] gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/292 (86%), Positives = 267/292 (91%)

Query: 52  ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
           A P  SRR   S+F VKASAAEKKK+LIVNTNSGGHAVIGFY AKELLGSGHEV+I+TVG
Sbjct: 28  AYPTCSRRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVG 87

Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
           +E+SDKMKKPPF+RF+EIV AGGKTVWG+PAEVG  V G TFDVVLDNNGK+LD VRPV 
Sbjct: 88  EESSDKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVV 147

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
           DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FRPQ
Sbjct: 148 DWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQ 207

Query: 232 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN 291
           YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAHVRDLSSMLTLAVENPEAAS N
Sbjct: 208 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGN 267

Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           IFN VSDRAVTLDGMAKLCAQAAGLPVEI+HYDPKA GIDAKKAFPFRNM F
Sbjct: 268 IFNCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHF 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis vinifera] gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/290 (84%), Positives = 257/290 (88%), Gaps = 3/290 (1%)

Query: 54  PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
           P S++R S S   VKA   +KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTIMTVG+E
Sbjct: 53  PTSTKRLSFSTLNVKA---QKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEE 109

Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
           NSDKMKKPPF+RF+EI SAGGKTVWGDPAEVG VV G  FDVVLDNNGK++D VRPV DW
Sbjct: 110 NSDKMKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDW 169

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
           AKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYM
Sbjct: 170 AKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYM 229

Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
           IGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLTLAVENP AAS NIF
Sbjct: 230 IGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPAAASGNIF 289

Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           N VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 290 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGIDAKKAFPFRNMHF 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172517|gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/300 (81%), Positives = 266/300 (88%), Gaps = 1/300 (0%)

Query: 45  ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I P + L  PA  R S+V S+F++ AS   KKKVLIVNTNSGGHAVIGFY AKELL SGH
Sbjct: 28  IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTNSGGHAVIGFYFAKELLASGH 87

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           +VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG  +FDVVLDNNGK+
Sbjct: 88  QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
           +WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267

Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/300 (81%), Positives = 267/300 (89%), Gaps = 1/300 (0%)

Query: 45  ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I P + L  PA  R S+V S+F++ AS   KKKVLIVNT+SGGHAVIGFY AKELLGSGH
Sbjct: 28  IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTSSGGHAVIGFYFAKELLGSGH 87

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           +VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG  +FDVVLDNNGK+
Sbjct: 88  QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
           +WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSMLTLAVE
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSMLTLAVE 267

Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           NP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPFRNM F
Sbjct: 268 NPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPFRNMHF 327

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/288 (82%), Positives = 256/288 (88%)

Query: 56  SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
           S R S+   FTV+ASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGH+VTI+TVG+E+S
Sbjct: 60  SRRFSTFQYFTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESS 119

Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
           DKMKK PFNRF+EI  AGG+T+WGDPA+VG ++ G  FD VLDNNGK+LDAVRPVADWAK
Sbjct: 120 DKMKKTPFNRFSEITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLDAVRPVADWAK 179

Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
           SSG KQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYISE F +WASFRPQYMIG
Sbjct: 180 SSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSWASFRPQYMIG 239

Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
           SGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVRDLSSMLT AV+NP AAS +IFN 
Sbjct: 240 SGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVRDLSSMLTAAVQNPAAASGHIFNC 299

Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           VSDRAVTLDGMAKLCA+AAG  VEIVHYDPKA G+DAKKAFPFRNM F
Sbjct: 300 VSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDAKKAFPFRNMHF 347

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444637|ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Cucumis sativus]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/286 (82%), Positives = 257/286 (89%)

Query: 58  RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
           R S+V +F+V+AS++ KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTI+TVG+++SDK
Sbjct: 66  RPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDK 125

Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
           M KPPFNRF+EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 126 MNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSS 185

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
           GVKQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSG
Sbjct: 186 GVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSG 245

Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
           NNKDCEEWFFDRIVR RP+PIPGSGMQ TNIAHVRDLSSMLTLAVE P+ A SNIFN VS
Sbjct: 246 NNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVS 305

Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
            RAVTLDGMAKLCAQAAG PV IVHYDPKA G+DAKKAFPFRNM F
Sbjct: 306 GRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHF 351

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559448|ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223540129|gb|EEF41706.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/300 (85%), Positives = 269/300 (89%), Gaps = 2/300 (0%)

Query: 45  ISPSSFLACPASSRRSSVSAF-TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I+P+S LA PA SRR S S+  TVKASAA KKKVLIVNTNSGGHAVIGFY AKELLGSGH
Sbjct: 48  ITPTS-LAYPACSRRFSASSSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGH 106

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           EVTI TVGDENSDKMKKPPF+RF+EIVSAGGKTVWGDPAEVG VV G TFDVVLDNNGK+
Sbjct: 107 EVTIFTVGDENSDKMKKPPFSRFSEIVSAGGKTVWGDPAEVGKVVEGATFDVVLDNNGKD 166

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           LD VRPVADWAKS+G KQFL+ISSAGIY P DEPPHVEGD VK  A HV VEKYI+E FS
Sbjct: 167 LDTVRPVADWAKSAGAKQFLYISSAGIYVPTDEPPHVEGDAVKSSASHVAVEKYIAEVFS 226

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 283
           +WA FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNI+HVRDLSSMLT +VE
Sbjct: 227 SWAVFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNISHVRDLSSMLTKSVE 286

Query: 284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           NPEAA  NIFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA GIDAKKAFPFRNM F
Sbjct: 287 NPEAAGGNIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAVGIDAKKAFPFRNMHF 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440743|ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/345 (73%), Positives = 284/345 (82%), Gaps = 4/345 (1%)

Query: 1   MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
           MA LASSS +LL +S  S L    L  S  L  S  S L S      S+FL+ P+  S R
Sbjct: 1   MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58

Query: 59  RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
            ++ +  ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59  LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118

Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
           KKPPFNRF+EIVSAGG TVWG+PA+VG+VVGG  FDVVLDNNGK+L++VRPV DWAKS+G
Sbjct: 119 KKPPFNRFSEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNNGKDLESVRPVIDWAKSAG 178

Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
            KQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYI E F +WA FRPQYM GSGN
Sbjct: 179 AKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEETFDSWAVFRPQYMTGSGN 238

Query: 239 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD 298
           NKDCEEWFFDRIVR RPV IPGSG+Q TNI+HV+DLSSMLTLAVENP+AA+ +IFN VSD
Sbjct: 239 NKDCEEWFFDRIVRDRPVLIPGSGLQLTNISHVKDLSSMLTLAVENPDAANHSIFNCVSD 298

Query: 299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
           RAVTL+G+AKLCAQAAG PV IVHYDPKA GIDAKKAFPFRN+ F
Sbjct: 299 RAVTLNGIAKLCAQAAGRPVNIVHYDPKAIGIDAKKAFPFRNVHF 343

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821230|ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/289 (82%), Positives = 255/289 (88%), Gaps = 1/289 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  +KK VLIVNTNSGGHAVIGFY AKELL +GH VTIMTVGDE+
Sbjct: 62  TSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDES 121

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           SDKMKKPPFNRF+EI+S GGKTVWG+PA+V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 122 SDKMKKPPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 181

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 182 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQYMI 241

Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
           GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NP+AAS NIFN
Sbjct: 242 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVTNPKAASGNIFN 301

Query: 295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
            VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAFPFRNM F
Sbjct: 302 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFPFRNMHF 350

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.825	0.709	0.820	2.1e-125
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.759	0.701	0.378	3.9e-44

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 1232 (438.7 bits), Expect = 2.1e-125, P = 2.1e-125
 Identities = 237/289 (82%), Positives = 253/289 (87%)

Query:    56 SSRRSSVSAFTVKASAA-EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
             +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct:    60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query:   115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
             S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct:   120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query:   175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
             KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct:   180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query:   235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN 294
             GSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEAAS NIFN
Sbjct:   240 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 299

Query:   295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
              VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAF FRNM F
Sbjct:   300 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHF 348

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 107/283 (37%), Positives = 156/283 (55%)

Query:    70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
             SA+ +KK+LI+    GG   IG +L++ L+  GH+VT+ T G   S   K+ P     + 
Sbjct:    49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102

Query:   130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                  K +   GD  +   V   ++   FDVV D NG+  + V P+ +      ++Q+++
Sbjct:   103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160

Query:   185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
              SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G  N   
Sbjct:   161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query:   242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
              EEWFF R+   RP+P+P SG+Q + + HV+DL++     + N E AS  IFN+  ++ V
Sbjct:   221 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGN-EKASREIFNISGEKYV 279

Query:   302 TLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMVF 343
             T DG+AK CA+A G P  EIVHY+PK      KKAFPFR+  F
Sbjct:   280 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHF 322


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      349       301   0.00096  115 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  214 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.64u 0.11s 24.75t   Elapsed:  00:00:01
  Total cpu time:  24.64u 0.11s 24.75t   Elapsed:  00:00:01
  Start:  Tue May 21 01:46:27 2013   End:  Tue May 21 01:46:28 2013

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LYA9	CP41A_ARATH	No assigned EC number	0.8200	0.8252	0.7093	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_II0251	mRNA-binding protein (404 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00041064	hypothetical protein (230 aa)			•						0.429

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	0.0
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-52
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-22
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-16
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-14
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	4e-10
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	4e-09
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	9e-09
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	5e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	8e-07
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	4e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	5e-06
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	6e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	7e-06
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	1e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-05
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-05
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-05
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-05
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	4e-04
pfam07992	283	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulp	5e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	7e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	8e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	0.001
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	0.002

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  529 bits (1365), Expect = 0.0
 Identities = 210/321 (65%), Positives = 240/321 (74%), Gaps = 1/321 (0%)

Query: 23  ASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNT 82
           A     LR S +S    SS  S    +  A    SRR+S  A    A+A EKKKVLIVNT
Sbjct: 1   ALSSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNT 60

Query: 83  NSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
           NSGGHA IGFYLAKEL+ +GHEVT+ T G E S KMKK PF+RF+E+ SAG KTVWGDPA
Sbjct: 61  NSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPA 120

Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
           +V + V G  FDVV DNNGK+LD V PVADWAKS G+KQFLF SSAG+YK +DEPPHVEG
Sbjct: 121 DVKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG 180

Query: 203 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 262
           D VKP AGH++VE Y+ +   NW SFRPQY+ G GNNKDCEEWFFDR+VR RPVPIPGSG
Sbjct: 181 DAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSG 240

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
           +Q T + HV+DL+SM  L V NP+AA   IFN+VSDRAVT DGMAK CA+AAG P EIVH
Sbjct: 241 IQLTQLGHVKDLASMFALVVGNPKAA-GQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVH 299

Query: 323 YDPKAAGIDAKKAFPFRNMVF 343
           YDPKA G  AKKAFPFR+  F
Sbjct: 300 YDPKAVGFGAKKAFPFRDQHF 320

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  173 bits (440), Expect = 2e-52
 Identities = 86/267 (32%), Positives = 120/267 (44%), Gaps = 34/267 (12%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            K+LI+    GG   IG  L +ELL +GH+VT+   G       +  P       +  G 
Sbjct: 1   MKILII----GGTRFIGKALVEELLAAGHDVTVFNRG-------RTKP------DLPEGV 43

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           + + GD      +  ++GG  FDVV+D        V    D  K   VKQ++FISSA +Y
Sbjct: 44  EHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGR-VKQYIFISSASVY 102

Query: 192 KPADEP-----PHVEGDVVKPD------AGHVQVEKYISENFS-NWASFRPQYMIGSGNN 239
                      P  E D V          G    E  + E  +  +   RP Y+ G G+ 
Sbjct: 103 LKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDY 162

Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
                +FFDR+ R RP+ +PG G       HV+DL+  L  A  NP+A    IFN+  D 
Sbjct: 163 TGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAI-GGIFNITGDE 221

Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPK 326
           AVT D + + CA+A G   EIVH +  
Sbjct: 222 AVTWDELLEACAKALGKEAEIVHVEED 248

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 95.8 bits (238), Expect = 2e-22
 Identities = 58/287 (20%), Positives = 113/287 (39%), Gaps = 30/287 (10%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            ++L+     GG   IG +L + LL +GH+V  +    +  D +         ++     
Sbjct: 1   MRILVT----GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDL 56

Query: 135 --KTVWGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFISS 187
             +   G P  V ++    +      ++       N+D    + + A+++GVK+F+F SS
Sbjct: 57  VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASS 116

Query: 188 AGIYKPADEPPHVEGDVVKPD------AGHVQVEKYISENFS----NWASFRPQYMIGSG 237
             +      P  ++ D+  P          +  E+ +              RP  + G G
Sbjct: 117 VSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176

Query: 238 NNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI 292
           +  D         +R     +  + I G G Q  +  +V D++  L LA+ENP+     +
Sbjct: 177 DKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG---V 233

Query: 293 FNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
           FN+ S    +T+  +A+  A+A G    ++ Y P     D ++    
Sbjct: 234 FNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLL 280

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 46/226 (20%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTV---WGD 140
           GG   IG +L + LL  GHEV +                +R + +V  A    V   W +
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVV---------------IDRLDVVVHLAALVGVPASWDN 49

Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
           P E         F+        N+     + + A+ +GVK+F++ SSA +Y   +  P  
Sbjct: 50  PDE--------DFET-------NVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEE 94

Query: 201 EGDVVKPD----AGHVQVEKYISENFSNW----ASFRPQYMIGSGNNKDCEEW---FFDR 249
           E    +P        +  E  +     ++       R   + G G     +     F  R
Sbjct: 95  EETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRR 154

Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
            +  +P+ + G G Q  +  HV D+   +  A+ENP      ++N+
Sbjct: 155 ALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENP-LEGGGVYNI 199

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 49/250 (19%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           +L+     GG   IG +L + LL  G+EV ++                R   + +   + 
Sbjct: 1   ILVT----GGTGFIGSHLVRRLLQEGYEVIVLGRR------------RRSESLNTGRIRF 44

Query: 137 VWGD---PAEVGNVVGGVTFDVVL--------DNNGK--------NLDAVRPVADWAKSS 177
             GD   P  +  ++  V  D V+          + +        N+     + + A+ +
Sbjct: 45  HEGDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRA 104

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
           GVK+F+F SS+ +Y    +PP  E   + P         A    VE Y           R
Sbjct: 105 GVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILR 164

Query: 230 PQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
              + G GN              RI+  +P+ + G G Q  +  +V D++  + LA+E+P
Sbjct: 165 LFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHP 224

Query: 286 EAASSNIFNL 295
           +     I+N+
Sbjct: 225 DG--GEIYNI 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 52/292 (17%), Positives = 95/292 (32%), Gaps = 69/292 (23%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-------RFNEIVSAGGKTV 137
           G    IG Y+   L   G +V +    +    +      +        F+          
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAY-ARRLLVMGDLGQVLFVEFDLR-------- 57

Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFI 185
             D   +   + G   DVV++  G+            +++    +A  AK +GV++ + I
Sbjct: 58  --DDESIRKALEGS--DVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113

Query: 186 SSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMIGSGN 238
           S+ G             D   P         G    E+ + E F      RP  + G  +
Sbjct: 114 SALGA------------DANSPSKYLRSKAEG----EEAVREAFPEATIVRPSVVFGRED 157

Query: 239 NKDCEEWFFDRIVRKR---PVPIPGSGMQ--FTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                  F +R  +     P P    G Q  F  + +V D++  +  A+++PE      +
Sbjct: 158 R------FLNRFAKLLAFLPFPPLIGGGQTKFQPV-YVGDVAEAIARALKDPETEGK-TY 209

Query: 294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKAAGIDAKKAFPFRNMVFI 344
            LV  +  TL  + +L  +  G    ++      A  I   K         +
Sbjct: 210 ELVGPKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKLLLLLPEPPL 261

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 41/177 (23%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV----WGD 140
           G     G  L KELL  GH+VT                 +R      A G T       D
Sbjct: 5   GATGKTGRRLVKELLARGHQVT---------------ALSRNPSKAPAPGVTPVQKDLFD 49

Query: 141 PAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
            A++   + G   D V+D  G    + D V+ + D A  +GV++ + +S+AG+Y    + 
Sbjct: 50  LADLAEALAG--VDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLY---RDE 104

Query: 198 PHVEGDVVKPDAGHV-----QVEKYISENFSNWASFRP---------QYMIGSGNNK 240
           P        P            E+ +  +  +W   RP          Y IG+  + 
Sbjct: 105 PGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYEIGTEGDP 161

Length = 182

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 40/267 (14%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
           GG   IG +L   LL  G+EV ++    +N    ++       E  +   + V  D  + 
Sbjct: 6   GGAGFIGSHLVDRLLEEGNEVVVV----DNLSSGRRENIEPEFENKAF--RFVKRDLLDT 59

Query: 145 GNVVGGVTFDVVLD-------NNG---------KNLDAVRPVADWAKSSGVKQFLFISSA 188
            + V     D V           G         +N+ A   V +  +++GVK+ +F SS+
Sbjct: 60  ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSS 119

Query: 189 GIYKPADEPPHVEGDVVKP----DAGHVQVEKYISEN-----FSNWASFRPQYMIGSGNN 239
            +Y  A   P  E     P     A  +  E  IS       F  W  FR   ++G  + 
Sbjct: 120 TVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWI-FRFANIVGPRST 178

Query: 240 KDCEEWFFDRI--VRKRP--VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
                  +D I  +++ P  + + G G Q  +  +V D    + LA E       NIFNL
Sbjct: 179 HGV---IYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEG-VNIFNL 234

Query: 296 VSDRAVTLDGMAKLCAQAAGLPVEIVH 322
            +D  ++++ +A++  +  GL     +
Sbjct: 235 GNDDTISVNEIAEIVIEELGLKPRFKY 261

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 50/237 (21%), Positives = 88/237 (37%), Gaps = 33/237 (13%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
           +G  + + LL     V  + V +      K   F   + +    G   + DP  +     
Sbjct: 10  LGTAVVELLLAKVASVVAL-VRNPE----KAKAF-AADGVEVRQGD--YDDPETLERAFE 61

Query: 150 GVTFDVVL----DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
           GV  D +L     +    +   +   D AK +GVK  +++S++G     D P  +  D  
Sbjct: 62  GV--DRLLLISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGA--DEDSPFLLARD-- 115

Query: 206 KPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ 264
                H   EKY+  +   +   RP  +M       D    F   I+ +  +  P  G  
Sbjct: 116 -----HGATEKYLEASGIPYTILRPGWFM-------DNLLEFLPSILEEGTIYGPA-GDG 162

Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
                  RD++     A+  P      ++NL    A++   +A + ++A G PV  V
Sbjct: 163 KVAFVDRRDIAEAAAAALTEPGHE-GKVYNLTGPEALSYAELAAILSEALGKPVRYV 218

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 45/213 (21%), Positives = 72/213 (33%), Gaps = 44/213 (20%)

Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEP-PHVEGDVVKPDAGH------VQV 214
           N+D  + V D   ++GV + +  SS  +Y    D P P  E   ++            +V
Sbjct: 86  NVDGTQNVLDACAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEV 145

Query: 215 EKYISENFS-----NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
           E+ ++E        N    RP  ++G G         F    R           QF    
Sbjct: 146 EQLLAEFRRRHPELNVTVLRPATILGPGT--RNTTRDFLSPRRLPVPGGFDPPFQFL--- 200

Query: 270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC-------------AQAAGL 316
           H  D++  L LAV    A ++ IFN+  D  V L  +  L              A AA  
Sbjct: 201 HEDDVARALVLAV---RAGATGIFNVAGDGPVPLSLVLALLGRRPVPLPSPLPAALAAAR 257

Query: 317 PV----------EIVHYDPKAAGIDAKKAFPFR 339
            +          + + Y P      A+    ++
Sbjct: 258 RLGLRPLPPEQLDFLQYPPVMDTTRARVELGWQ 290

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
           V D AK +GV+ F+F S   + K     PH +    K      +VE+YI  +       R
Sbjct: 90  VVDAAKRAGVQHFVFSSVPDVEKLTLAVPHFDS---K-----AEVEEYIRASGLPATILR 141

Query: 230 PQ-YMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGM-QFTNIAHVRDLSSMLTLAVENPE 286
           P  +M     N         ++      + +P     +   I  V D+   +    ++P 
Sbjct: 142 PAFFM----EN-FLTPPAPQKMEDGTLTLVLPLDPDTKLPMID-VADIGPAVAAIFKDPA 195

Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 319
             +     L  D  +T + +A   ++  G PV 
Sbjct: 196 KFNGKTIELAGDE-LTPEEIAAAFSKVLGKPVT 227

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 53/273 (19%), Positives = 89/273 (32%), Gaps = 79/273 (28%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           VLI+     G   +G  LA++LL  G +VT  T   E      K   +R   +       
Sbjct: 1   VLIL-----GCGYLGQRLARQLLAQGWQVTGTTRSPE------KLAADRPAGVTPLAADL 49

Query: 137 VWGDPAEVGNVVGGVTFDVVLDN----NGKNLDAVRPVAD-----WAKSSGVKQFLFISS 187
               P  + +V      D ++ +     G       P         A+   V++ +++SS
Sbjct: 50  T--QPGLLADV------DHLVISLPPPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSS 101

Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF- 246
            G+Y                D     V++    N S       + ++      + E+   
Sbjct: 102 TGVY---------------GDQQGEWVDETSPPNPST---ESGRALL------EAEQALL 137

Query: 247 ----------------------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 284
                                   R+ +    P  G+    TN  HV DL   L  A++ 
Sbjct: 138 ALGSKPTTILRLAGIYGPGRHPLRRLAQGTGRPPAGN--APTNRIHVDDLVGALAFALQR 195

Query: 285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
           P      ++N+V D  VT     +  A+  GLP
Sbjct: 196 PAP--GPVYNVVDDLPVTRGEFYQAAAELLGLP 226

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 25/164 (15%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           +LI    + G   IG  LA+ELL  GHEVT++     N+ ++ K       E V+     
Sbjct: 1   ILI--LGATGF--IGRALARELLEQGHEVTLL---VRNTKRLSKE----DQEPVAVVEGD 49

Query: 137 VWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
           +  D   + + V GV  DVV+          D    +++  R V + AK +GVK F+FIS
Sbjct: 50  L-RDLDSLSDAVQGV--DVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFIS 106

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           S G Y    E            A   + E  + E    +   RP
Sbjct: 107 SLGAYGDLHEETEPSPS-SPYLAVKAKTEAVLREASLPYTIVRP 149

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 44/270 (16%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---- 140
           GG   +G +L K LL +G +V ++   +   +  ++          +   + + GD    
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLE---ADRVRVLEGDLTQP 61

Query: 141 -----PAEVGNVVGGVT----FDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLF 184
                 A    + G V          D           N+D    V + A    +++F +
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFHY 121

Query: 185 ISSA---GIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISENF-------SNWASFRPQYM 233
           +S+A   G  +    E      +  +      +  K  +E              +RP  +
Sbjct: 122 VSTAYVAGNREGNIRETEL---NPGQNFKNPYEQSKAEAEQLVRAAATQIPLTVYRPSIV 178

Query: 234 IGSGNNKDCEE----WFFDRIVRKRP--VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 287
           +G       E+    +    ++ K    +P+PG+     N+  V  ++  +    + PEA
Sbjct: 179 VGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKKPEA 238

Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 317
               IF+L      TL  +A L   A   P
Sbjct: 239 N-GQIFHLTDPTPQTLREIADLFKSAFLSP 267

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 7e-06
 Identities = 64/313 (20%), Positives = 116/313 (37%), Gaps = 81/313 (25%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---------- 124
           ++ L+    +G    IG +LA+ L   GH V       ++ + M +P  +          
Sbjct: 1   QRALV----TGAGGFIGSHLAERLKAEGHYVRG--ADWKSPEHMTQPTDDDEFHLVDLRE 54

Query: 125 -RFNEIVSAGGKTVWGDPAEVG-------NVVGGVTFDVVLDNNGKNLDAVRPVADWAKS 176
                  + G   V+   A++G       N    +  + +++ N   L+A       A+ 
Sbjct: 55  MENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFN--MLEA-------ARI 105

Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVVK-------PDAGH--VQVEKYISENFSNWAS 227
           +GV++FLF SSA +Y P  +   +E  VV+       P         EK  +E       
Sbjct: 106 NGVERFLFASSACVY-PEFK--QLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQ--H 160

Query: 228 FRPQYMIGSGNNKDC------------EEWFFDR------IVRK-------RPVPIPGSG 262
           +   Y I      +               W   R      + RK           I G G
Sbjct: 161 YNEDYGI------ETRIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDG 214

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 322
           +Q  +  ++ D    L   +E+         NL SD  V+++ +A++    +G P+EI+H
Sbjct: 215 LQTRSFTYIDDCVEGLRRLMESDFGEP---VNLGSDEMVSMNELAEMVLSFSGKPLEIIH 271

Query: 323 YDPKAAGIDAKKA 335
           + P   G+  + +
Sbjct: 272 HTPGPQGVRGRNS 284

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 42/260 (16%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV 144
           G    IG  + +EL+ +GHEV  +   D  + K++           +AG +   GD  ++
Sbjct: 7   GATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLE-----------AAGAQVHRGDLEDL 55

Query: 145 GNVVGGVT---------FDVVLDNNGKN--LD--AVRPVADWAKSSGVKQFLFISSAGIY 191
             +              F    DN  +   +D  A+  + +  + +G K  ++ S   + 
Sbjct: 56  DILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALRGTG-KPLIYTSGIWLL 114

Query: 192 KP------ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW 245
            P       +E P                 +             P  + G G+       
Sbjct: 115 GPTGGQEEDEEAPDDPPTPAARAVSEAAALELAERGVRASVVRLPPVVHGRGD-----HG 169

Query: 246 FF----DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
           F          K      G G       H  D + +  LA+E  +A S  +++ V++  +
Sbjct: 170 FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGS--VYHAVAEEGI 227

Query: 302 TLDGMAKLCAQAAGLPVEIV 321
            +  +A+   +  G+PV  +
Sbjct: 228 PVKDIAEAIGRRLGVPVVSI 247

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 56/246 (22%), Positives = 84/246 (34%), Gaps = 65/246 (26%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           KVL+V    G    +G ++ +ELL  G++V  +                R      A   
Sbjct: 1   KVLVV----GATGKVGRHVVRELLDRGYQVRALV---------------RDPS--QAEKL 39

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV----------------------RPVADW 173
              G  AEV  VVG +T    L    + +DAV                        + D 
Sbjct: 40  EAAG--AEV--VVGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDA 95

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
           AK +GVK+F+ +SS G  KP   P    G  +  DA     E Y+  +  ++   RP   
Sbjct: 96  AKKAGVKRFVLVSSIGADKP-SHPLEALGPYL--DAKRK-AEDYLRASGLDYTIVRPG-- 149

Query: 234 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                         D       V + G G +        D++ +L  A++ P A     F
Sbjct: 150 -----------GLTDDPAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDTPAAI-GKTF 197

Query: 294 NLVSDR 299
            L    
Sbjct: 198 ELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 50/279 (17%), Positives = 103/279 (36%), Gaps = 42/279 (15%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VLIV    GG+  IG +L   LL  G +V +          +          +    G 
Sbjct: 1   RVLIV----GGNGFIGSHLVDALLEEGPQVRVF------DRSIPPYELPL-GGVDYIKGD 49

Query: 136 TVWGDPAEVGNVVGG-------VTFDVVLDNNG-------KNLDAVRPVADWAKSSGVKQ 181
               + A++ + + G        +      +N         N+     + +   ++G+ +
Sbjct: 50  Y--ENRADLESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGK 107

Query: 182 FLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWASFRPQY 232
            +F SS G +Y   ++ P  E D   P + +    + +EKY+         ++   R   
Sbjct: 108 IIFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVLRISN 167

Query: 233 MIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
             G G   D ++       ++I+R  P+ I G G    +  ++ DL   L   + +    
Sbjct: 168 PYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRS--KG 225

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
              +FN+ S    +L  +     +  G  V++++   + 
Sbjct: 226 LEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPART 264

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 17/172 (9%)

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--------- 224
           A+ +GVK+F++ SS+ +Y      P  E     P + +  V KY  E +           
Sbjct: 104 ARKAGVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPY-AVSKYAGELYCQVFARLYGLP 162

Query: 225 WASFRPQYMIGSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
             S R   + G   + +         F +R ++  P  I G G Q  +  +V D+     
Sbjct: 163 TVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANL 222

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 331
           LA      A   ++N+ + +  +++ +A+L  +  G  +E V+  P+   + 
Sbjct: 223 LAATA--GAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVR 272

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 32/166 (19%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN 146
            G  + +E L  GHEVT +     +  K+                K V GD     +V  
Sbjct: 11  TGSAIVREALARGHEVTALVR---DPAKLP---------AEHEKLKVVQGDVLDLEDVKE 58

Query: 147 VVGGVTFDVVLD--NNGKNL-------DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
            + G   D V+       +L       +  R +    K++GVK+ + +  AG      + 
Sbjct: 59  ALEG--QDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKV 116

Query: 198 PHVEGDVVKPD------AGHVQVEKYISENFSNWASFRPQYMIGSG 237
             V   ++ P         H ++ K + E+  +W + RP  +   G
Sbjct: 117 TLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGG 162

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 38/264 (14%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT----VGDENSDKMKKPPFNRFNEIVS 131
           KVL+    +G +  IG  L  +LL  G EV I        + +    + P  + F ++  
Sbjct: 1   KVLV----TGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDSFTDLF- 55

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS---- 187
             G       A   +V+     D + D    N +  R +A  A   GVK+F+F+SS    
Sbjct: 56  -LGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLSSVKVN 114

Query: 188 --AGIYKPADE--PPHVEGD--VVKPDAGHVQVEKYISENFSNWASFRPQYMIGS---GN 238
               +  P DE  PP  +      K +A    +E   S+        RP  + G    GN
Sbjct: 115 GEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEV-VILRPPMVYGPGVRGN 173

Query: 239 NKDCEEWFFDRIVR--KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 295
                   F R++R   R +P+P G+     ++  + +L   + L +  P  A++  F L
Sbjct: 174 --------FARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLP-KAANGTF-L 223

Query: 296 VSD-RAVTLDGMAKLCAQAAGLPV 318
           VSD   V+   +     +A G P 
Sbjct: 224 VSDGPPVSTAELVDEIRRALGKPT 247

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 47/255 (18%), Positives = 82/255 (32%), Gaps = 36/255 (14%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            K+L+     G    +G  + +ELL  GHEV       E +  +         E+V    
Sbjct: 1   MKILVT----GATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGD- 50

Query: 135 KTVWGDPAEVGNVVGGVTFDVVL-----DNNGKNLDAVRPVADWAKSS--GVKQFLFISS 187
                DP  +     GV   +++      ++      V  V   A+++  GVK  + +S 
Sbjct: 51  ---LRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSV 107

Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
            G    +                   VE  +  +   + + R               +  
Sbjct: 108 LGADAASPSALA---------RAKAAVEAALRSSGIPYTTLRRAAFYLGAGA----AFIE 154

Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 307
                  PV   G G    +   V D++  L  A++ P  A    + L    A+TL  +A
Sbjct: 155 AAEAAGLPVIPRGIGR--LSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALTLAELA 211

Query: 308 KLCAQAAGLPVEIVH 322
                  G PV ++ 
Sbjct: 212 SGLDYTIGRPVGLIP 226

Length = 275

>gnl|CDD|219686 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 14/131 (10%)

Query: 59  RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
           R  + +  +       K+V++V    GG   IG  LA  L   G EVT++   D    + 
Sbjct: 127 RGVIDSDEILELLELPKRVVVV----GG-GYIGLELAAALAKLGKEVTVVERRDRLLARA 181

Query: 119 KKPPFNRFNE-IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDA--------VRP 169
                    E +              V   VG      V   +G+ LDA         RP
Sbjct: 182 DDEISAALLEKLEKLLLGVTVLLVVVVVVKVGDGKVVEVKLGDGEELDADVVLVAIGRRP 241

Query: 170 VADWAKSSGVK 180
             +  + +GV+
Sbjct: 242 NTELLEQAGVE 252

This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. Length = 283

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 52/295 (17%), Positives = 94/295 (31%), Gaps = 99/295 (33%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K++I    +GG   IG  L + L  +GHEV +++         ++P      +       
Sbjct: 1   KIVI----TGGTGFIGRALTRRLTAAGHEVVVLS---------RRPG-----KAEGLAEV 42

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNL------------------DAVRPVADWAKSS 177
             W   +     + G   D V++  G+ +                  ++ R + +   ++
Sbjct: 43  ITWDGLSLGPWELPGA--DAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANA 100

Query: 178 GVKQFLFI--SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
                + I  S+ G Y  + +    E                  ++F             
Sbjct: 101 PAPPKVLISASAVGYYGHSGDEVLTE-------------NSPSGKDFL------------ 135

Query: 236 SGNNKDCEEWFFD------RIVRKRPVPI--PGSGM--------------------QFTN 267
           +   K  E+          R+V  R   +  P  G                     Q+ +
Sbjct: 136 AEVCKAWEKAAQPASELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPLGSGRQWMS 195

Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA----AGLPV 318
             H+ DL  ++  A+ENP+   S   N V+   VT     K   +A    AGLPV
Sbjct: 196 WIHIDDLVRLIEFAIENPD--LSGPVNAVAPNPVTNAEFTKALGRALHRPAGLPV 248

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 46/185 (24%), Positives = 72/185 (38%), Gaps = 55/185 (29%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
            VL+  ++ G    IGF +A+ELL  G  V I +  +EN +K  K       E+   G  
Sbjct: 2   NVLVTASSRG----IGFNVARELLKKGARVVISSRNEENLEKALK-------ELKEYGEV 50

Query: 135 ---KTVWGDPAEVGNVV-------GGVTFDVVLDNNGK--------------------NL 164
              K    D  ++ N+V       GG+  D ++ N G                      L
Sbjct: 51  YAVKADLSDKDDLKNLVKEAWELLGGI--DALVWNAGNVRCEPCMLHEAGYSDWLEAALL 108

Query: 165 DAVRP-------VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 217
             V P       +  W +       +++SS  + +P   PP V  DV +  AG VQ+ K 
Sbjct: 109 HLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM--PPLVLADVTR--AGLVQLAKG 164

Query: 218 ISENF 222
           +S  +
Sbjct: 165 VSRTY 169

Length = 259

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 52/265 (19%), Positives = 93/265 (35%), Gaps = 50/265 (18%)

Query: 79  IVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW 138
           I+ T + G   IG  +A  LL +G  V  +   DE           R   + + G + V 
Sbjct: 1   ILVTGATGR--IGSKVATTLLEAGRPVRALVRSDE-----------RAAALAARGAEVVV 47

Query: 139 GDPAEVGNV------VGGVTF----DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
           GD  +   +      V  V F        D     + A    A   + +GVK+ + +SS 
Sbjct: 48  GDLDDPAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVNLSSV 107

Query: 189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD 248
           G   P      +         GH  +E+ ++         RP + +        E     
Sbjct: 108 GA-DPESPSGLIR--------GHWLMEQVLNWAGLPVVHLRPAWFM--------ENLLSQ 150

Query: 249 -RIVRKR---PVPIPGSGMQFTNIAHV--RDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
              +RK     +P PG G     +  +   D++ +    + +PE     ++ L     +T
Sbjct: 151 APSIRKAGVLALPFPGDGR----LPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLT 206

Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKA 327
           ++ +A   ++  G PV  V    + 
Sbjct: 207 MNEIAAALSRVLGRPVRYVPVPEEQ 231

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 46/237 (19%), Positives = 84/237 (35%), Gaps = 60/237 (25%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF----NRFNEIV 130
           K  L++    G   ++G +L +ELL S +   +  +        +K  F     +  +IV
Sbjct: 1   KTALVL----GATGLVGKHLLRELLKSPYYSKVTAIV------RRKLTFPEAKEKLVQIV 50

Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVL-------------DNNGK-NLDAVRPVADWAKS 176
               + +        N       DV               +N  K + D V  +A  AK+
Sbjct: 51  VDF-ERLDEYLEAFQNP------DVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKA 103

Query: 177 SGVKQFLFISSAGIYKPADEP-----PHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRP 230
           +GV+ FL +SS G    AD         V+G          +VE+ + +  F     FRP
Sbjct: 104 AGVQHFLLVSSLG----ADPKSSFLYLKVKG----------EVERDLQKLGFERLTIFRP 149

Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS-SMLTLAVENPE 286
             ++G        E    +++R     +   G           ++ +M+  A++   
Sbjct: 150 GLLLGERQESRPGERLAQKLLR----ILSPLGFPKYKPIPAETVAKAMVKAALKESS 202

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
PLN00016	378	RNA-binding protein; Provisional	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
PLN02653	340	GDP-mannose 4,6-dehydratase	99.97
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.97
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.97
PLN02240	352	UDP-glucose 4-epimerase	99.97
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.97
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.97
CHL00194	317	ycf39 Ycf39; Provisional	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.96
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.96
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.95
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PLN02996	491	fatty acyl-CoA reductase	99.94
PRK05865	854	hypothetical protein; Provisional	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.93
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.93
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
PLN02583	297	cinnamoyl-CoA reductase	99.93
PRK12320	699	hypothetical protein; Provisional	99.91
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.91
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.9
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.89
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.89
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.89
PLN02503	605	fatty acyl-CoA reductase 2	99.86
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.86
PLN03209	576	translocon at the inner envelope of chloroplast su	99.86
KOG2774	366	consensus NAD dependent epimerase [General functio	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.84
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.83
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.83
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.81
PRK06482	276	short chain dehydrogenase; Provisional	99.78
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.76
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.74
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.72
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.72
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.72
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.71
PRK07074	257	short chain dehydrogenase; Provisional	99.71
PRK09135	249	pteridine reductase; Provisional	99.71
PRK12828	239	short chain dehydrogenase; Provisional	99.69
PRK08263	275	short chain dehydrogenase; Provisional	99.68
PRK05875	276	short chain dehydrogenase; Provisional	99.68
PRK07774	250	short chain dehydrogenase; Provisional	99.67
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.65
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
PRK07067	257	sorbitol dehydrogenase; Provisional	99.65
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.65
PRK06180	277	short chain dehydrogenase; Provisional	99.64
PRK07806	248	short chain dehydrogenase; Provisional	99.63
PRK06914	280	short chain dehydrogenase; Provisional	99.63
PRK06194	287	hypothetical protein; Provisional	99.63
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK12829	264	short chain dehydrogenase; Provisional	99.62
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.61
PRK06138	252	short chain dehydrogenase; Provisional	99.61
PRK07775	274	short chain dehydrogenase; Provisional	99.61
PRK09186	256	flagellin modification protein A; Provisional	99.61
PRK12827	249	short chain dehydrogenase; Provisional	99.61
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.6
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.6
PRK12746	254	short chain dehydrogenase; Provisional	99.6
PRK06182	273	short chain dehydrogenase; Validated	99.6
COG2910	211	Putative NADH-flavin reductase [General function p	99.59
PRK07060	245	short chain dehydrogenase; Provisional	99.59
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.59
PRK08219	227	short chain dehydrogenase; Provisional	99.58
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.57
PRK06128	300	oxidoreductase; Provisional	99.56
PRK06701	290	short chain dehydrogenase; Provisional	99.56
PRK07890	258	short chain dehydrogenase; Provisional	99.56
PRK06123	248	short chain dehydrogenase; Provisional	99.56
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.56
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK06841	255	short chain dehydrogenase; Provisional	99.55
PRK07577	234	short chain dehydrogenase; Provisional	99.55
PRK05876	275	short chain dehydrogenase; Provisional	99.55
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.55
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.55
PRK12939	250	short chain dehydrogenase; Provisional	99.55
PRK05993	277	short chain dehydrogenase; Provisional	99.54
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK06179	270	short chain dehydrogenase; Provisional	99.53
PRK09291	257	short chain dehydrogenase; Provisional	99.53
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.52
PRK10538	248	malonic semialdehyde reductase; Provisional	99.52
PRK06500	249	short chain dehydrogenase; Provisional	99.52
PRK08324	681	short chain dehydrogenase; Validated	99.52
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.52
PRK08017	256	oxidoreductase; Provisional	99.52
PRK06181	263	short chain dehydrogenase; Provisional	99.51
PRK07069	251	short chain dehydrogenase; Validated	99.51
PRK05717	255	oxidoreductase; Validated	99.51
PRK06523	260	short chain dehydrogenase; Provisional	99.51
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.5
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.5
PRK12937	245	short chain dehydrogenase; Provisional	99.49
PLN02253	280	xanthoxin dehydrogenase	99.49
PRK08628	258	short chain dehydrogenase; Provisional	99.49
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.49
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.49
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.48
PRK07326	237	short chain dehydrogenase; Provisional	99.48
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.48
PRK07454	241	short chain dehydrogenase; Provisional	99.47
PRK08264	238	short chain dehydrogenase; Validated	99.47
PRK06398	258	aldose dehydrogenase; Validated	99.47
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK09242	257	tropinone reductase; Provisional	99.47
PRK07856	252	short chain dehydrogenase; Provisional	99.47
PRK07825	273	short chain dehydrogenase; Provisional	99.47
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.46
PRK08643	256	acetoin reductase; Validated	99.46
PRK06196	315	oxidoreductase; Provisional	99.45
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.44
PRK09134	258	short chain dehydrogenase; Provisional	99.44
PRK06114	254	short chain dehydrogenase; Provisional	99.44
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.44
PRK08267	260	short chain dehydrogenase; Provisional	99.44
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.44
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.44
PRK06057	255	short chain dehydrogenase; Provisional	99.44
PRK07024	257	short chain dehydrogenase; Provisional	99.44
PRK12744	257	short chain dehydrogenase; Provisional	99.43
PRK07814	263	short chain dehydrogenase; Provisional	99.43
PRK08265	261	short chain dehydrogenase; Provisional	99.43
PRK07985	294	oxidoreductase; Provisional	99.43
PRK07041	230	short chain dehydrogenase; Provisional	99.43
PRK12743	256	oxidoreductase; Provisional	99.42
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.42
PRK07063	260	short chain dehydrogenase; Provisional	99.42
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.41
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK07478	254	short chain dehydrogenase; Provisional	99.41
PRK05650	270	short chain dehydrogenase; Provisional	99.41
PRK07035	252	short chain dehydrogenase; Provisional	99.41
PRK06101	240	short chain dehydrogenase; Provisional	99.41
PRK06949	258	short chain dehydrogenase; Provisional	99.41
PRK07102	243	short chain dehydrogenase; Provisional	99.41
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.4
PRK06483	236	dihydromonapterin reductase; Provisional	99.4
PRK05693	274	short chain dehydrogenase; Provisional	99.39
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.39
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.39
PRK08251	248	short chain dehydrogenase; Provisional	99.39
PRK06172	253	short chain dehydrogenase; Provisional	99.39
PRK12742	237	oxidoreductase; Provisional	99.39
PRK08226	263	short chain dehydrogenase; Provisional	99.39
PRK12747	252	short chain dehydrogenase; Provisional	99.39
PRK08339	263	short chain dehydrogenase; Provisional	99.38
PRK07109	334	short chain dehydrogenase; Provisional	99.38
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.38
PRK06198	260	short chain dehydrogenase; Provisional	99.37
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.36
PRK05867	253	short chain dehydrogenase; Provisional	99.35
PRK07677	252	short chain dehydrogenase; Provisional	99.35
PRK05866	293	short chain dehydrogenase; Provisional	99.35
PRK06197	306	short chain dehydrogenase; Provisional	99.34
PRK07062	265	short chain dehydrogenase; Provisional	99.34
PRK07904	253	short chain dehydrogenase; Provisional	99.34
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.34
PRK07576	264	short chain dehydrogenase; Provisional	99.33
PRK08589	272	short chain dehydrogenase; Validated	99.33
PRK07831	262	short chain dehydrogenase; Provisional	99.32
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.32
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.31
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.31
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.3
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.3
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.3
PRK07023	243	short chain dehydrogenase; Provisional	99.29
PRK06953	222	short chain dehydrogenase; Provisional	99.29
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.28
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.28
PRK06484	520	short chain dehydrogenase; Validated	99.28
PRK06924	251	short chain dehydrogenase; Provisional	99.28
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.28
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.27
PRK05872	296	short chain dehydrogenase; Provisional	99.27
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.26
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.25
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.24
PRK06139	330	short chain dehydrogenase; Provisional	99.24
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.23
PRK09072	263	short chain dehydrogenase; Provisional	99.23
PRK06125	259	short chain dehydrogenase; Provisional	99.23
PRK08703	239	short chain dehydrogenase; Provisional	99.22
PRK08278	273	short chain dehydrogenase; Provisional	99.22
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.22
PRK07832	272	short chain dehydrogenase; Provisional	99.21
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.21
PRK08177	225	short chain dehydrogenase; Provisional	99.21
PRK07578	199	short chain dehydrogenase; Provisional	99.2
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK05884	223	short chain dehydrogenase; Provisional	99.17
PRK06940	275	short chain dehydrogenase; Provisional	99.17
PRK07201	657	short chain dehydrogenase; Provisional	99.16
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.15
PRK05854	313	short chain dehydrogenase; Provisional	99.13
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.13
PRK05855	582	short chain dehydrogenase; Validated	99.12
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.12
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.1
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.05
PRK07791	286	short chain dehydrogenase; Provisional	99.04
PRK12367	245	short chain dehydrogenase; Provisional	99.03
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.02
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.01
PLN02780	320	ketoreductase/ oxidoreductase	99.01
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.01
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.0
PRK06484	520	short chain dehydrogenase; Validated	98.98
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.98
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.94
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.93
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.93
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.93
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.93
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.91
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.9
PRK05599	246	hypothetical protein; Provisional	98.89
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.88
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.87
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.87
PLN00015	308	protochlorophyllide reductase	98.86
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.85
PRK08862	227	short chain dehydrogenase; Provisional	98.78
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.76
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.7
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.68
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.66
KOG0725	270	consensus Reductases with broad range of substrate	98.66
PRK08303	305	short chain dehydrogenase; Provisional	98.62
KOG1208	314	consensus Dehydrogenases with different specificit	98.56
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.54
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.51
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.48
PRK08309	177	short chain dehydrogenase; Provisional	98.44
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.43
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.41
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.41
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.39
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.37
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.34
COG1028	251	FabG Dehydrogenases with different specificities (	98.31
PRK09620	229	hypothetical protein; Provisional	98.28
PTZ00325	321	malate dehydrogenase; Provisional	98.26
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.25
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.21
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.1
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.09
PLN00106	323	malate dehydrogenase	98.05
PRK06720	169	hypothetical protein; Provisional	97.99
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.95
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.89
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.85
PRK05086	312	malate dehydrogenase; Provisional	97.76
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.65
COG3268	382	Uncharacterized conserved protein [Function unknow	97.64
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.59
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.58
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.56
PRK14982	340	acyl-ACP reductase; Provisional	97.49
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.42
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.4
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.39
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.39
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.31
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.3
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.26
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.22
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.18
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.17
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.15
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.13
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.12
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.09
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.05
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.97
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.96
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	96.94
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.88
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.86
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.85
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.82
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.82
PRK09496	453	trkA potassium transporter peripheral membrane com	96.82
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.82
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.81
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.78
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.76
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.71
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.7
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.69
PRK08328	231	hypothetical protein; Provisional	96.67
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.62
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.62
PLN02775	286	Probable dihydrodipicolinate reductase	96.58
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.56
PRK08223	287	hypothetical protein; Validated	96.56
PRK09496	453	trkA potassium transporter peripheral membrane com	96.49
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.48
PRK04148	134	hypothetical protein; Provisional	96.45
PLN02383	344	aspartate semialdehyde dehydrogenase	96.43
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.4
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.39
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	96.37
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.35
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.31
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.3
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.28
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.25
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.24
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.24
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.23
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.22
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.21
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.19
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.16
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.16
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.15
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.07
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.03
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.02
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.0
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.99
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.97
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.93
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	95.9
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.87
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.87
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.83
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	95.83
PRK10669	558	putative cation:proton antiport protein; Provision	95.82
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.81
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	95.79
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.79
PRK07411	390	hypothetical protein; Validated	95.78
PRK06849	389	hypothetical protein; Provisional	95.76
TIGR00514	449	accC acetyl-CoA carboxylase, biotin carboxylase su	95.76
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.75
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.75
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.74
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.73
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.71
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.71
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.66
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.63
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.63
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.58
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.58
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.57
PRK08462	445	biotin carboxylase; Validated	95.56
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.54
PRK05442	326	malate dehydrogenase; Provisional	95.54
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.54
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.52
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.49
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.47
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.46
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.46
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	95.45
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	95.43
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.39
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.39
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.39
PRK13303	265	L-aspartate dehydrogenase; Provisional	95.38
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.38
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.36
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.36
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	95.36
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.35
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.33
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	95.31
PRK07877	722	hypothetical protein; Provisional	95.29
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.29
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.27
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.25
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.24
TIGR00036	266	dapB dihydrodipicolinate reductase.	95.21
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.2
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.19
PRK06223	307	malate dehydrogenase; Reviewed	95.19
PRK14852	989	hypothetical protein; Provisional	95.18
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.17
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.14
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.13
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.1
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.09
PRK14851	679	hypothetical protein; Provisional	95.09
PRK08655	437	prephenate dehydrogenase; Provisional	95.01
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	94.99
PRK05678	291	succinyl-CoA synthetase subunit alpha; Validated	94.94
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.93
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	94.92
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	94.92
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.91
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	94.91
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	94.91
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	94.89
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.88
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.88
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.82
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.81
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.81
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.81
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.8
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	94.79
PRK15059	292	tartronate semialdehyde reductase; Provisional	94.78
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.76
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.75
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.69
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.68
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.66
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	94.66
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.64
PF00289	110	CPSase_L_chain: Carbamoyl-phosphate synthase L cha	94.64
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	94.63
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	94.62
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.62
PRK06111	450	acetyl-CoA carboxylase biotin carboxylase subunit;	94.61
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.6
PLN02494	477	adenosylhomocysteinase	94.59
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.59
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.58
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.57
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.57
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.56
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	94.55
PRK12833	467	acetyl-CoA carboxylase biotin carboxylase subunit;	94.55
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.55
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.54
PTZ00117	319	malate dehydrogenase; Provisional	94.54
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.54
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.52
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	94.49
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.47
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	94.46
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.4
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.39
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.39
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	94.39
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	94.34
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	94.31
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.28
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.24
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.22
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.19
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.16
PRK13243	333	glyoxylate reductase; Reviewed	94.13

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=2.2e-43  Score=336.10  Aligned_cols=274  Identities=70%  Similarity=1.126  Sum_probs=230.1

Q ss_pred             cCCCccccCCccccccccccccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec
Q 018900           52 ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS  131 (349)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~  131 (349)
                      ....+.++...+.........++++|||||||+|||||||++|+++|+++||+|++++|+......+.......+.++..
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~  109 (378)
T PLN00016         30 ARAQGSRRASQVAGAAAAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS  109 (378)
T ss_pred             hccccccccccchhhhhhcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh
Confidence            33334444444444455566678899999999999999999999999999999999999876544333333333444545


Q ss_pred             CCCeEEEcChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCCh
Q 018900          132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (349)
Q Consensus       132 ~~~~~~~~D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k  211 (349)
                      .+++++++|..++.+++...++|+|||+++.+..++++++++|++.|++||||+||.++|+.....++.|+.+..+..+|
T Consensus       110 ~~v~~v~~D~~d~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK  189 (378)
T PLN00016        110 AGVKTVWGDPADVKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGH  189 (378)
T ss_pred             cCceEEEecHHHHHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchH
Confidence            57999999988888888666689999999999999999999999999999999999999998766778888777776689


Q ss_pred             HHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCC
Q 018900          212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  291 (349)
Q Consensus       212 ~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  291 (349)
                      ..+|+++++.+++++++||+++||++....+..+++..+..++++.+++++++.++++|++|+|++++.+++++...+ +
T Consensus       190 ~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~-~  268 (378)
T PLN00016        190 LEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAG-Q  268 (378)
T ss_pred             HHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccC-C
Confidence            999999999999999999999999987666677888888889988888989999999999999999999999875544 8


Q ss_pred             EEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC
Q 018900          292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK  326 (349)
Q Consensus       292 ~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~  326 (349)
                      +||+++++.+|+.|+++.+.+.+|.+.++..+++.
T Consensus       269 ~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~  303 (378)
T PLN00016        269 IFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPK  303 (378)
T ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCceeecCcc
Confidence            99999999999999999999999998877655443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.1e-38  Score=276.14  Aligned_cols=254  Identities=22%  Similarity=0.276  Sum_probs=205.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||.||||+|.+.+|++.||+|+++++-.....+..          ....++++.+|   .+.|+++|.+.
T Consensus         1 ~~iLVt----GGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v----------~~~~~~f~~gDi~D~~~L~~vf~~~   66 (329)
T COG1087           1 MKVLVT----GGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIAL----------LKLQFKFYEGDLLDRALLTAVFEEN   66 (329)
T ss_pred             CeEEEe----cCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHh----------hhccCceEEeccccHHHHHHHHHhc
Confidence            589999    99999999999999999999999998664443211          10014566666   67899999999


Q ss_pred             CccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CCCh
Q 018900          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGH  211 (349)
Q Consensus       152 ~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k  211 (349)
                      ++|+|||+|+                .|+.++.+|+++|++.|+++|||.||+.|||.+...|+.|+.+..|    ..+|
T Consensus        67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sK  146 (329)
T COG1087          67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSK  146 (329)
T ss_pred             CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHH
Confidence            9999999999                4899999999999999999999999999999999999999987654    4788


Q ss_pred             HHHHHHHHhh----CCcEEEEecCceeeCCCCCC----------chHHHHHHHHhCCC-cccCC------CCCcceeeee
Q 018900          212 VQVEKYISEN----FSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRP-VPIPG------SGMQFTNIAH  270 (349)
Q Consensus       212 ~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~  270 (349)
                      +..|++++++    ++++++||..++.|-...+.          +++..++.++...+ +.++|      ||...||+||
T Consensus       147 lm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIH  226 (329)
T COG1087         147 LMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIH  226 (329)
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeee
Confidence            8899988775    89999999999988654321          45555555554444 66776      4556789999


Q ss_pred             HHHHHHHHHHHhcCCCccCC-CEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCccC-----CCccc---cCCCccc
Q 018900          271 VRDLSSMLTLAVENPEAASS-NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDAKK---AFPFRNM  341 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~-~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~~-----~~~~k---~~g~~p~  341 (349)
                      |.|+|++++++++.-...+. .+||+++|+..++.|+++.+.++.|++++++..+.+.-+     .+..|   .|||+|+
T Consensus       227 V~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~  306 (329)
T COG1087         227 VDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPT  306 (329)
T ss_pred             hhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcc
Confidence            99999999999986554222 599999999999999999999999999998877665544     33333   4999999


Q ss_pred             e
Q 018900          342 V  342 (349)
Q Consensus       342 ~  342 (349)
                      +
T Consensus       307 ~  307 (329)
T COG1087         307 Y  307 (329)
T ss_pred             c
Confidence            7

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.4e-35  Score=279.46  Aligned_cols=238  Identities=18%  Similarity=0.204  Sum_probs=184.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+|+||||    ||+||||++|+++|+++|++|++++|.......................+.++.+|   .+.+..+++
T Consensus        14 ~~~~vlVt----GatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         14 APKRWLIT----GVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            46899999    99999999999999999999999998653221100000000001111245667777   456777777


Q ss_pred             CCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CC
Q 018900          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DA  209 (349)
Q Consensus       150 ~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~  209 (349)
                      +  +|+|||+|+                .|+.++.+++++|++.++++|||+||.++||...+.+..|+.+..|    ..
T Consensus        90 ~--~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~  167 (348)
T PRK15181         90 N--VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAV  167 (348)
T ss_pred             C--CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhH
Confidence            5  699999997                2578899999999999999999999999999765566666654333    35


Q ss_pred             ChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHH
Q 018900          210 GHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (349)
Q Consensus       210 ~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  280 (349)
                      +|..+|+++..    ++++++++||+++|||+...     .+++.++..+..++++.++|+|.+.++|+|++|++++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~  247 (348)
T PRK15181        168 TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLL  247 (348)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence            67777776554    38999999999999997643     2577888888889999899999999999999999999998


Q ss_pred             HhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          281 AVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       281 ~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      ++..... ..+++||+++++.++++|+++.+.+.++.
T Consensus       248 ~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        248 SATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             HHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            8765422 23589999999999999999999999873

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=3.8e-35  Score=283.81  Aligned_cols=265  Identities=18%  Similarity=0.210  Sum_probs=192.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc----CCCC-C----CCccc---ceecCCCeEEEc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK----MKKP-P----FNRFN---EIVSAGGKTVWG  139 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~----~~~~-~----~~~~~---~l~~~~~~~~~~  139 (349)
                      .++|+||||    ||+||||++|+++|+++|++|++++|......+    .... +    ..++.   +....+++++.+
T Consensus        45 ~~~k~VLVT----GatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~  120 (442)
T PLN02572         45 SKKKKVMVI----GGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG  120 (442)
T ss_pred             ccCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence            357899999    999999999999999999999998853211100    0000 0    00000   111235777777


Q ss_pred             C---hhhHHhhhcCCCccEEEeCCC-------------------CChhhHHHHHHHHHhCCCc-EEEEeccccccCCCCC
Q 018900          140 D---PAEVGNVVGGVTFDVVLDNNG-------------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADE  196 (349)
Q Consensus       140 D---~~~l~~~~~~~~~d~Vi~~a~-------------------~~~~~~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~  196 (349)
                      |   .+.+.+++++.++|+|||+|+                   .|+.++.+++++|++.|++ +||++||..+||... 
T Consensus       121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-  199 (442)
T PLN02572        121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-  199 (442)
T ss_pred             CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-
Confidence            7   567888888777899999995                   2567899999999999985 999999999999643 


Q ss_pred             CCCCC-----------CC---CC----CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC--------------
Q 018900          197 PPHVE-----------GD---VV----KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK--------------  240 (349)
Q Consensus       197 ~~~~e-----------~~---~~----~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~--------------  240 (349)
                      .++.|           +.   +.    .|..+|..+|.+++.    ++++++++|++++|||+...              
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            12222           11   11    234667777776654    38999999999999998543              


Q ss_pred             ----CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccC-CCEEEeeCCCccCHHHHHHHHHHH--
Q 018900          241 ----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS-SNIFNLVSDRAVTLDGMAKLCAQA--  313 (349)
Q Consensus       241 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~-~~~~~i~~~~~~t~~el~~~~~~~--  313 (349)
                          ..+..++..+..++++.++|+|++.++|+|++|++++++.+++++...+ ..+||+++ +.+++.|+++.+.+.  
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~  358 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGE  358 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHH
Confidence                2455667777788888899999999999999999999999998753222 25899987 569999999999999  


Q ss_pred             -hCCCceeEEcCCCcc-------CCCcc--ccCCCccce
Q 018900          314 -AGLPVEIVHYDPKAA-------GIDAK--KAFPFRNMV  342 (349)
Q Consensus       314 -~g~~~~~~~~~~~~~-------~~~~~--k~~g~~p~~  342 (349)
                       +|.+.++...+.+..       ..+..  +.+||+|+.
T Consensus       359 ~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~  397 (442)
T PLN02572        359 KLGLDVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHL  397 (442)
T ss_pred             hhCCCCCeeeCCCCcccccccccCccHHHHHHcCCCCCC
Confidence             897766655543311       12222  249999986

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.9e-34  Score=251.25  Aligned_cols=254  Identities=19%  Similarity=0.188  Sum_probs=205.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCC-----CCcccCCCCCCCcccceecCCCeEEEcC---hhhH
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGD-----ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l  144 (349)
                      |++|||    ||.||||+.++++++++..  +|++++.-.     +....+.          ..++..++.+|   .+.+
T Consensus         1 ~~iLVT----GGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~----------~~~~~~fv~~DI~D~~~v   66 (340)
T COG1088           1 MKILVT----GGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE----------DSPRYRFVQGDICDRELV   66 (340)
T ss_pred             CcEEEe----cCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh----------cCCCceEEeccccCHHHH
Confidence            589999    9999999999999999854  567776421     2221111          12355666665   7888


Q ss_pred             HhhhcCCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCc-EEEEeccccccCCCCCC--CCCCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEP--PHVEGDVV  205 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~--~~~e~~~~  205 (349)
                      .++++..++|+|+|+|+                .|+.||.+||+++++...+ ||+++||..|||.-...  .++|..+.
T Consensus        67 ~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          67 DRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             HHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCC
Confidence            99999888999999999                4899999999999998864 99999999999985443  57888887


Q ss_pred             CCC----CChHHHHHHHH----hhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          206 KPD----AGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       206 ~~~----~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      .|.    ++|.+..-+++    -+|++++|.|.++-|||...+. +++.++.+++.|++++++|+|.+.+||+||+|-++
T Consensus       147 ~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~  226 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCR  226 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHH
Confidence            664    34444333333    3599999999999999998776 88999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-----eEEcCCC-----ccCCCccc---cCCCcccee
Q 018900          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-----IVHYDPK-----AAGIDAKK---AFPFRNMVF  343 (349)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-----~~~~~~~-----~~~~~~~k---~~g~~p~~~  343 (349)
                      ++..++++...  |++|||+++...+-.|+++.+.+.+|.+..     +.+|..+     ...++..|   .+||+|+.-
T Consensus       227 ai~~Vl~kg~~--GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~  304 (340)
T COG1088         227 AIDLVLTKGKI--GETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQET  304 (340)
T ss_pred             HHHHHHhcCcC--CceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCC
Confidence            99999999877  699999999999999999999999998766     6666544     33566555   599999764


Q ss_pred             e
Q 018900          344 I  344 (349)
Q Consensus       344 ~  344 (349)
                      |
T Consensus       305 f  305 (340)
T COG1088         305 F  305 (340)
T ss_pred             H
Confidence            4

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.8e-33  Score=268.96  Aligned_cols=252  Identities=19%  Similarity=0.226  Sum_probs=194.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc-cCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ...||||||    ||+||||++|+++|+++|++|++++|...... ...       ......+++++.+|.  ++..+.+
T Consensus       118 ~~~mkILVT----GatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~-------~~~~~~~~~~~~~Di--~~~~~~~  184 (436)
T PLN02166        118 RKRLRIVVT----GGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV-------HLFGNPRFELIRHDV--VEPILLE  184 (436)
T ss_pred             cCCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhh-------hhccCCceEEEECcc--ccccccC
Confidence            355789999    99999999999999999999999998642111 000       000112456666664  2233433


Q ss_pred             CCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC-----CCC---
Q 018900          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVK---  206 (349)
Q Consensus       151 ~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~-----~~~---  206 (349)
                        +|+|||+|+                .|+.++.+++++|++.++ +||++||..|||...+.+++|+.     +..   
T Consensus       185 --~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s  261 (436)
T PLN02166        185 --VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  261 (436)
T ss_pred             --CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCC
Confidence              699999997                257789999999999886 89999999999986666777763     221   


Q ss_pred             -CCCChHHHHHHHHhh----CCcEEEEecCceeeCCCC---CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          207 -PDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       207 -~~~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                       +..+|..+|+++.++    +++++++|++++|||+..   ..++..++.++..++++.++|++++.++|+|++|+++++
T Consensus       262 ~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai  341 (436)
T PLN02166        262 CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGL  341 (436)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence             335688888877654    899999999999999853   346778899999999999999999999999999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cCCCccce
Q 018900          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AFPFRNMV  342 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~g~~p~~  342 (349)
                      +.+++++.   +++||+++++.+|+.|+++.+.+.+|.+.++...+....     ..+..|   .+||+|++
T Consensus       342 ~~~~~~~~---~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~  410 (436)
T PLN02166        342 VALMEGEH---VGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKI  410 (436)
T ss_pred             HHHHhcCC---CceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCC
Confidence            99997643   269999999999999999999999998776665543322     233333   49999975

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=5e-33  Score=265.79  Aligned_cols=235  Identities=17%  Similarity=0.255  Sum_probs=178.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      +.+.|+||||    ||+||||++|+++|+++ |++|++++|..+....+.....    .....+++++.+|   .+.+.+
T Consensus        11 ~~~~~~VlVT----GgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~----~~~~~~~~~~~~Dl~d~~~l~~   82 (386)
T PLN02427         11 PIKPLTICMI----GAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDT----VPWSGRIQFHRINIKHDSRLEG   82 (386)
T ss_pred             cccCcEEEEE----CCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccc----ccCCCCeEEEEcCCCChHHHHH
Confidence            3456789999    99999999999999998 5999999987543322211100    0011357777777   566777


Q ss_pred             hhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC------
Q 018900          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV------  204 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~------  204 (349)
                      ++++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||..+||...+.++.|+.+      
T Consensus        83 ~~~~--~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~  159 (386)
T PLN02427         83 LIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPA  159 (386)
T ss_pred             Hhhc--CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccc
Confidence            7776  5999999972                4567889999999887 8999999999999643222222211      


Q ss_pred             --------------------CCCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCC------------CCchHHHHH
Q 018900          205 --------------------VKPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN------------KDCEEWFFD  248 (349)
Q Consensus       205 --------------------~~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~------------~~~~~~~~~  248 (349)
                                          ..+..+|..+|+++.+    .+++++++||+++|||+..            ..++..++.
T Consensus       160 ~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~  239 (386)
T PLN02427        160 FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN  239 (386)
T ss_pred             cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHH
Confidence                                1234567788888765    3899999999999999742            114455667


Q ss_pred             HHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCC-CccCHHHHHHHHHHHhCC
Q 018900          249 RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~-~~~t~~el~~~~~~~~g~  316 (349)
                      .+..++++.+++++++.++|+|++|+|++++.+++++...++++||++++ +.+++.|+++.+.+.+|.
T Consensus       240 ~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        240 NLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            77788888888888889999999999999999999865334589999997 589999999999999985

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=5.7e-33  Score=261.70  Aligned_cols=228  Identities=23%  Similarity=0.273  Sum_probs=178.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh----hhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~l~~~~  148 (349)
                      ||+||||    ||+||+|++|+++|+++ ||+|++++|..+....+.          ...+++++.+|.    +.+.+++
T Consensus         1 m~~ilVt----GatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          1 MKKVLIL----GVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----------NHPRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----------cCCCeEEEeCCCCCCHHHHHHHH
Confidence            4689999    99999999999999986 799999998653222111          113466777774    3455666


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC-------
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-------  205 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~-------  205 (349)
                      ++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||..+||...+.++.|+...       
T Consensus        67 ~~--~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~  143 (347)
T PRK11908         67 KK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPIN  143 (347)
T ss_pred             cC--CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCC
Confidence            65  5999999872                4678999999999988 79999999999997655566665431       


Q ss_pred             ----CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCC---------CCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          206 ----KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN---------KDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       206 ----~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                          .+..+|..+|+++..    .+++++++||+++|||+..         ..++..++.++..++++.+.+++++.++|
T Consensus       144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~  223 (347)
T PRK11908        144 KPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAF  223 (347)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecc
Confidence                123456667766654    4899999999999999753         22567788888889988888888999999


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC-CccCHHHHHHHHHHHhCCCc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~-~~~t~~el~~~~~~~~g~~~  318 (349)
                      ||++|++++++.+++++.. ..+++||++++ +.+|+.|+++.+.+.+|..+
T Consensus       224 i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        224 TDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             ccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            9999999999999998642 33589999997 57999999999999998643

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=8.9e-33  Score=266.80  Aligned_cols=253  Identities=19%  Similarity=0.210  Sum_probs=193.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +.||||||    ||+||||++|+++|+++|++|++++|......+.      ....+...+++++.+|.  ++..+.+  
T Consensus       118 ~~~kILVT----GatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~------~~~~~~~~~~~~i~~D~--~~~~l~~--  183 (442)
T PLN02206        118 KGLRVVVT----GGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN------VMHHFSNPNFELIRHDV--VEPILLE--  183 (442)
T ss_pred             CCCEEEEE----CcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh------hhhhccCCceEEEECCc--cChhhcC--
Confidence            56899999    9999999999999999999999998753221100      00111223566776774  3334444  


Q ss_pred             ccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC-----CC----CC
Q 018900          153 FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VV----KP  207 (349)
Q Consensus       153 ~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~-----~~----~~  207 (349)
                      +|+|||+|+                .|+.++.+++++|++.|+ +||++||..||+.....+..|+.     +.    .+
T Consensus       184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y  262 (442)
T PLN02206        184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCY  262 (442)
T ss_pred             CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchH
Confidence            699999997                357789999999999996 89999999999976666676663     21    12


Q ss_pred             CCChHHHHHHHHh----hCCcEEEEecCceeeCCCC---CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHH
Q 018900          208 DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (349)
Q Consensus       208 ~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  280 (349)
                      ..+|..+|+++.+    ++++++++|++++|||+..   ..++..++..+..++++.+++++++.++|+|++|++++++.
T Consensus       263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~  342 (442)
T PLN02206        263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR  342 (442)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHH
Confidence            3568888887754    4899999999999999853   33567788888889999999999999999999999999999


Q ss_pred             HhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc---cCCCcccee
Q 018900          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK---AFPFRNMVF  343 (349)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k---~~g~~p~~~  343 (349)
                      +++++.   +++||+++++.+++.|+++.+++.+|.+.++...+...     ...+..|   .+||+|++-
T Consensus       343 a~e~~~---~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~  410 (442)
T PLN02206        343 LMEGEH---VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVS  410 (442)
T ss_pred             HHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCC
Confidence            998653   26999999999999999999999999877666554332     1233333   499999853

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.5e-32  Score=238.40  Aligned_cols=253  Identities=21%  Similarity=0.197  Sum_probs=204.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ...++|+||    ||.||||+||++.|..+||+|.+++..-.......      -..+..+.++.+..|.  +..++.++
T Consensus        25 ~~~lrI~it----GgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~------~~~~~~~~fel~~hdv--~~pl~~ev   92 (350)
T KOG1429|consen   25 SQNLRILIT----GGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENL------EHWIGHPNFELIRHDV--VEPLLKEV   92 (350)
T ss_pred             CCCcEEEEe----cCcchHHHHHHHHHHhcCCeEEEEecccccchhhc------chhccCcceeEEEeec--hhHHHHHh
Confidence            346899999    99999999999999999999999997543332111      0123334566666663  44466665


Q ss_pred             CccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCC---------
Q 018900          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK---------  206 (349)
Q Consensus       152 ~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~---------  206 (349)
                        |.|+|+|+                .|..++.+++-.|++.+ +||++.||..|||.+...|..|+.+..         
T Consensus        93 --D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~c  169 (350)
T KOG1429|consen   93 --DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSC  169 (350)
T ss_pred             --hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhh
Confidence              99999988                37889999999999988 699999999999999888888876532         


Q ss_pred             CCCChHHHHHHHHhh----CCcEEEEecCceeeCCCCC---CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          207 PDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       207 ~~~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                      +...|..+|.++.++    |+.+.|.|+.+.|||+...   ..+..|+.+++++.++.++|+|.|+++|.++.|+++.++
T Consensus       170 ydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll  249 (350)
T KOG1429|consen  170 YDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLL  249 (350)
T ss_pred             hhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHH
Confidence            123566677766554    8999999999999998654   378889999999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCccCCCccc--------cCCCccce
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK--------AFPFRNMV  342 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~~~~~~k--------~~g~~p~~  342 (349)
                      .+++.+..   ..+|+++++.+|+.||++++.+..|....++..++...+.+.++        .+||.|+.
T Consensus       250 ~Lm~s~~~---~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv  317 (350)
T KOG1429|consen  250 RLMESDYR---GPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKV  317 (350)
T ss_pred             HHhcCCCc---CCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCC
Confidence            99999876   45999999999999999999999987777777665555443322        29999985

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.5e-31  Score=252.80  Aligned_cols=232  Identities=15%  Similarity=0.140  Sum_probs=178.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |++||||    ||+||||++++++|+++|++++++.+..........     ...+ ...+++++.+|   .+++.++++
T Consensus         1 ~~~vlVt----GatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   71 (355)
T PRK10217          1 MRKILIT----GGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMS-----LAPVAQSERFAFEKVDICDRAELARVFT   71 (355)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhh-----hhhcccCCceEEEECCCcChHHHHHHHh
Confidence            5789999    999999999999999999886554443221111100     0010 11235555665   677888888


Q ss_pred             CCCccEEEeCCC----------------CChhhHHHHHHHHHhC---------CCcEEEEeccccccCCCC--CCCCCCC
Q 018900          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSS---------GVKQFLFISSAGIYKPAD--EPPHVEG  202 (349)
Q Consensus       150 ~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~---------gv~~~i~~Ss~~vy~~~~--~~~~~e~  202 (349)
                      +.++|+|||+|+                .|+.++.+++++|++.         ++++||++||.++|+...  ..+++|+
T Consensus        72 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~  151 (355)
T PRK10217         72 EHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET  151 (355)
T ss_pred             hcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC
Confidence            766899999997                2578899999999762         568999999999999642  3457776


Q ss_pred             CCCCC----CCChHHHHHHHH----hhCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          203 DVVKP----DAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       203 ~~~~~----~~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                      .+..+    ..+|..+|.++.    +.+++++++||+++|||+... .++..++..+..++++++++++++.++|+|++|
T Consensus       152 ~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D  231 (355)
T PRK10217        152 TPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVED  231 (355)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHH
Confidence            55433    345667666664    348999999999999998743 366777788888888888899999999999999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      +++++..+++....  +++||+++++.+++.|+++.+++.+|.
T Consensus       232 ~a~a~~~~~~~~~~--~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        232 HARALYCVATTGKV--GETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             HHHHHHHHHhcCCC--CCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            99999999987543  489999999999999999999999885

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2.6e-31  Score=252.18  Aligned_cols=250  Identities=18%  Similarity=0.165  Sum_probs=187.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+|+||||    ||+||||++++++|+++||+|++++|......  ...         ....+++.+|   .+.+..++.
T Consensus        20 ~~~~IlVt----GgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~--~~~---------~~~~~~~~~Dl~d~~~~~~~~~   84 (370)
T PLN02695         20 EKLRICIT----GAGGFIASHIARRLKAEGHYIIASDWKKNEHM--SED---------MFCHEFHLVDLRVMENCLKVTK   84 (370)
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHhCCCEEEEEEecccccc--ccc---------cccceEEECCCCCHHHHHHHHh
Confidence            56899999    99999999999999999999999998653211  000         0123455666   445555565


Q ss_pred             CCCccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC----CCCCCCC--CCC
Q 018900          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE----PPHVEGD--VVK  206 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~----~~~~e~~--~~~  206 (349)
                      +  +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+....    .++.|+.  +..
T Consensus        85 ~--~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~  162 (370)
T PLN02695         85 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE  162 (370)
T ss_pred             C--CCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCC
Confidence            4  5999999852                 4668899999999999999999999999996532    2355543  233


Q ss_pred             C----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHh-CCCcccCCCCCcceeeeeHH
Q 018900          207 P----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       207 ~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~  272 (349)
                      +    ..+|..+|+++..    .+++++++||+++|||+...     .+...++..+.. +.++.+++++++.++|+|++
T Consensus       163 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~  242 (370)
T PLN02695        163 PQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFID  242 (370)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHH
Confidence            3    2356666766544    48999999999999997532     145667777765 47778899999999999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc----cCCCccc---cCCCccce
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA----AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~----~~~~~~k---~~g~~p~~  342 (349)
                      |++++++.++++..   +++||+++++.+++.|+++.+.+..|.+.++...+.+.    ...+..|   .+||+|++
T Consensus       243 D~a~ai~~~~~~~~---~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~sk~~~~lgw~p~~  316 (370)
T PLN02695        243 ECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEGVRGRNSDNTLIKEKLGWAPTM  316 (370)
T ss_pred             HHHHHHHHHHhccC---CCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCCccccccCHHHHHHhcCCCCCC
Confidence            99999999887642   37999999999999999999999999876666554321    1223323   48999985

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=7e-32  Score=273.71  Aligned_cols=232  Identities=19%  Similarity=0.245  Sum_probs=184.7

Q ss_pred             cccccceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh---h-
Q 018900           69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA---E-  143 (349)
Q Consensus        69 ~~~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~---~-  143 (349)
                      .+...+|+||||    ||+||||++|+++|+++ ||+|++++|........          +...+++++.+|..   . 
T Consensus       310 ~~~~~~~~VLVT----GatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----------~~~~~~~~~~gDl~d~~~~  375 (660)
T PRK08125        310 CSAKRRTRVLIL----GVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----------LGHPRFHFVEGDISIHSEW  375 (660)
T ss_pred             hhhhcCCEEEEE----CCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----------cCCCceEEEeccccCcHHH
Confidence            344567899999    99999999999999986 79999999976432111          11235777888853   2 


Q ss_pred             HHhhhcCCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC--
Q 018900          144 VGNVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV--  205 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~--  205 (349)
                      +.+++++  +|+|||+|+                .|+.++.+++++|++.+ ++|||+||..+||.....+++|+.+.  
T Consensus       376 l~~~l~~--~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T PRK08125        376 IEYHIKK--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLI  452 (660)
T ss_pred             HHHHhcC--CCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccc
Confidence            4556655  699999987                25788999999999998 89999999999997655577776532  


Q ss_pred             ---------CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC---------CchHHHHHHHHhCCCcccCCCCC
Q 018900          206 ---------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       206 ---------~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                               .|..+|..+|.++..    ++++++++||+++|||+...         .++..++..+..++++.++++++
T Consensus       453 ~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~  532 (660)
T PRK08125        453 VGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGK  532 (660)
T ss_pred             cCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCc
Confidence                     134567777777754    38999999999999997532         35677888888888888889999


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC-ccCHHHHHHHHHHHhCCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~-~~t~~el~~~~~~~~g~~  317 (349)
                      +.++|+|++|++++++.+++++.. ..+++||+++++ .++++|+++.+.+.+|.+
T Consensus       533 ~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        533 QKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             eeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            999999999999999999987532 335899999985 799999999999999864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.5e-31  Score=251.69  Aligned_cols=236  Identities=14%  Similarity=0.107  Sum_probs=180.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc--ccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+||||    ||+||||++|+++|+++|++|++++|..+..  ..+.... .........+++++.+|   .+.+.++++
T Consensus         1 ~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALIT----GITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIY-EDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEE----cCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhh-hccccccccceeEEEeccCCHHHHHHHHH
Confidence            589999    9999999999999999999999999976421  1110000 00000012346677776   567888888


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCc---EEEEeccccccCCCCCCCCCCCCCCCC---
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK---QFLFISSAGIYKPADEPPHVEGDVVKP---  207 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~---~~i~~Ss~~vy~~~~~~~~~e~~~~~~---  207 (349)
                      +.++|+|||+|+.                |+.++.+++++|++.+++   +|||+||..+||.....++.|+.+..|   
T Consensus        76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  155 (343)
T TIGR01472        76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSP  155 (343)
T ss_pred             hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCCh
Confidence            7778999999983                456899999999998863   899999999999766567777766543   


Q ss_pred             -CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC----chHHHHHHHHhCCC-cccCCCCCcceeeeeHHHHHHH
Q 018900          208 -DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       208 -~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                       ..+|..+|.+++.    +++++++.|+.++|||+....    .+..++..+..+++ ..++|+|++.++|+|++|++++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a  235 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA  235 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence             3567777777654    378899999999999975433    23344555666654 3456889999999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                      ++.+++++.   +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       236 ~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       236 MWLMLQQDK---PDDYVIATGETHSVREFVEVSFEYIGKTL  273 (343)
T ss_pred             HHHHHhcCC---CccEEecCCCceeHHHHHHHHHHHcCCCc
Confidence            999998753   25899999999999999999999999754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.1e-31  Score=247.77  Aligned_cols=240  Identities=17%  Similarity=0.281  Sum_probs=185.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      ||||||    ||+||||++++++|+++| +|++++|....                   +..+..|.+.+.+++++.++|
T Consensus         1 m~iLVt----G~~GfiGs~l~~~L~~~g-~V~~~~~~~~~-------------------~~~Dl~d~~~~~~~~~~~~~D   56 (299)
T PRK09987          1 MNILLF----GKTGQVGWELQRALAPLG-NLIALDVHSTD-------------------YCGDFSNPEGVAETVRKIRPD   56 (299)
T ss_pred             CeEEEE----CCCCHHHHHHHHHhhccC-CEEEecccccc-------------------ccCCCCCHHHHHHHHHhcCCC
Confidence            589999    999999999999999999 79999885410                   111223678888888877789


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||+|+.                |+.++.+++++|++.|+ +|||+||..||+.....|+.|+++..|.    .+|+.+
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~  135 (299)
T PRK09987         57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAG  135 (299)
T ss_pred             EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            99999983                46789999999999996 8999999999998766789898776553    567888


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCC--CCcceeeeeHHHHHHHHHHHhcCCCccCCCE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS--GMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  292 (349)
                      |+++..+..+++|+|++++|||+.. .++..++..+.+++++.++++  +.+.+.+.+++|++.++..+++.+..  +++
T Consensus       136 E~~~~~~~~~~~ilR~~~vyGp~~~-~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~--~gi  212 (299)
T PRK09987        136 EKALQEHCAKHLIFRTSWVYAGKGN-NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV--AGL  212 (299)
T ss_pred             HHHHHHhCCCEEEEecceecCCCCC-CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC--CCe
Confidence            8888888889999999999999753 466777877777888888887  56655666777888888888765433  369


Q ss_pred             EEeeCCCccCHHHHHHHHHHHh---CCCc---eeEEcCC----------CccCCCcccc---CCCccce
Q 018900          293 FNLVSDRAVTLDGMAKLCAQAA---GLPV---EIVHYDP----------KAAGIDAKKA---FPFRNMV  342 (349)
Q Consensus       293 ~~i~~~~~~t~~el~~~~~~~~---g~~~---~~~~~~~----------~~~~~~~~k~---~g~~p~~  342 (349)
                      ||+++++.+|+.|+++.+.+.+   |.+.   ++.+++.          .....+..|+   +||+|..
T Consensus       213 yni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~~  281 (299)
T PRK09987        213 YHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPD  281 (299)
T ss_pred             EEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCcc
Confidence            9999999999999999998864   4443   2333331          1223444443   9999864

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.2e-31  Score=244.47  Aligned_cols=231  Identities=21%  Similarity=0.304  Sum_probs=178.5

Q ss_pred             EEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCC-eEEEcC---hhhHHhhhcCC
Q 018900           78 LIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        78 LVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D---~~~l~~~~~~~  151 (349)
                      |||    ||+||+|++|+++|+++|  ++|++++|........         .+...+. +++.+|   .+++.++++++
T Consensus         1 LVT----GgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~---------~~~~~~~~~~~~~Di~d~~~l~~a~~g~   67 (280)
T PF01073_consen    1 LVT----GGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK---------DLQKSGVKEYIQGDITDPESLEEALEGV   67 (280)
T ss_pred             CEE----cCCcHHHHHHHHHHHHCCCceEEEEcccccccccch---------hhhcccceeEEEeccccHHHHHHHhcCC
Confidence            799    999999999999999999  7999999876433210         1111122 255665   78899999887


Q ss_pred             CccEEEeCCC---------------CChhhHHHHHHHHHhCCCcEEEEeccccccCC-CCCCCC---CCCCC------CC
Q 018900          152 TFDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPH---VEGDV------VK  206 (349)
Q Consensus       152 ~~d~Vi~~a~---------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~-~~~~~~---~e~~~------~~  206 (349)
                        |+|||+|+               +|+.|++||+++|++.+++||||+||.++++. ..+.++   +|+.+      ..
T Consensus        68 --d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~  145 (280)
T PF01073_consen   68 --DVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDP  145 (280)
T ss_pred             --ceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCc
Confidence              99999988               37899999999999999999999999998876 112222   33332      12


Q ss_pred             CCCChHHHHHHHHhh-C--------CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHH
Q 018900          207 PDAGHVQVEKYISEN-F--------SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       207 ~~~~k~~~ek~~~~~-~--------~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                      |..+|..+|+++.+. +        +..++|||+.||||++.. +...+...+..+......|+++...+++|++|+|.+
T Consensus       146 Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~a  224 (280)
T PF01073_consen  146 YAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHA  224 (280)
T ss_pred             hHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHH
Confidence            346788899988765 2        678999999999998654 344455556666666778888888999999999999


Q ss_pred             HHHHhcC---C---CccCCCEEEeeCCCccC-HHHHHHHHHHHhCCCcee-EEcC
Q 018900          278 LTLAVEN---P---EAASSNIFNLVSDRAVT-LDGMAKLCAQAAGLPVEI-VHYD  324 (349)
Q Consensus       278 ~~~~~~~---~---~~~~~~~~~i~~~~~~t-~~el~~~~~~~~g~~~~~-~~~~  324 (349)
                      +++++++   +   ...+|+.|+|.+++++. +.|+...+.+.+|.+.+. .++|
T Consensus       225 hvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  225 HVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             HHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence            9988753   2   34567999999999999 999999999999988665 4443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=1.4e-30  Score=265.31  Aligned_cols=260  Identities=18%  Similarity=0.241  Sum_probs=195.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~  146 (349)
                      .++|+||||    ||+||||++++++|+++  |++|++++|..... .....    .......+++++.+|.   +.+..
T Consensus         4 ~~~~~VLVT----GatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~-~~~~l----~~~~~~~~v~~~~~Dl~d~~~~~~   74 (668)
T PLN02260          4 YEPKNILIT----GAAGFIASHVANRLIRNYPDYKIVVLDKLDYCS-NLKNL----NPSKSSPNFKFVKGDIASADLVNY   74 (668)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccc-hhhhh----hhcccCCCeEEEECCCCChHHHHH
Confidence            457899999    99999999999999998  68999998753111 00000    0001123677888874   44555


Q ss_pred             hhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCC---CCCCCCCC
Q 018900          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPP---HVEGDVVK  206 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~---~~e~~~~~  206 (349)
                      ++...++|+|||+|+.                |+.++.+++++|++.+ ++||||+||..+||.....+   ..|+.+..
T Consensus        75 ~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~  154 (668)
T PLN02260         75 LLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLL  154 (668)
T ss_pred             HHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCC
Confidence            5655568999999983                4567899999999987 89999999999999765422   24444433


Q ss_pred             ----CCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHH
Q 018900          207 ----PDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       207 ----~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                          +..+|..+|+++.+    ++++++++||+++|||+... .++..++..+..++++++++++++.++|+|++|+|++
T Consensus       155 p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a  234 (668)
T PLN02260        155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEA  234 (668)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHH
Confidence                34578888888765    48999999999999998754 3677788888888888999999999999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce--eEEcCCCcc-----CCCcc--ccCCCccce
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE--IVHYDPKAA-----GIDAK--KAFPFRNMV  342 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~--~~~~~~~~~-----~~~~~--k~~g~~p~~  342 (349)
                      +..++++...  +++||+++++.+++.|+++.+++.+|.+..  +...+....     ..+..  +.+||+|+.
T Consensus       235 ~~~~l~~~~~--~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~  306 (668)
T PLN02260        235 FEVVLHKGEV--GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERT  306 (668)
T ss_pred             HHHHHhcCCC--CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCC
Confidence            9999976543  479999999999999999999999997643  333332222     12333  349999975

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=1.8e-30  Score=244.11  Aligned_cols=236  Identities=15%  Similarity=0.129  Sum_probs=180.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc--ccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+||||++++++|+++|++|++++|..+..  ..+......  ......+++++.+|   .+++.+
T Consensus         4 ~~~~~vlVT----GatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~   77 (340)
T PLN02653          4 PPRKVALIT----GITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYID--PHPNKARMKLHYGDLSDASSLRR   77 (340)
T ss_pred             CCCCEEEEE----CCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccc--cccccCceEEEEecCCCHHHHHH
Confidence            457899999    9999999999999999999999999875421  111100000  00011245666666   567778


Q ss_pred             hhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCc-----EEEEeccccccCCCCCCCCCCCCCC
Q 018900          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~-----~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      ++...++|+|||+|+.                |+.++.+++++|++.+++     +||++||..+||.... ++.|+.+.
T Consensus        78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~  156 (340)
T PLN02653         78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPF  156 (340)
T ss_pred             HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCC
Confidence            8887778999999983                466899999999998875     8999999999998664 77787765


Q ss_pred             CC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCCCccc-CCCCCcceeeeeHH
Q 018900          206 KP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPI-PGSGMQFTNIAHVR  272 (349)
Q Consensus       206 ~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~  272 (349)
                      .+    ..+|..+|.+++.    ++++++..|+.++|||+....+    +..++..+..+.+..+ .|++++.++|+|++
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~  236 (340)
T PLN02653        157 HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAG  236 (340)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHH
Confidence            54    3567777777654    3778889999999999765443    3334455556766554 48899999999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                      |+|++++.++++..   +++||+++++++++.|+++.+.+.+|.+
T Consensus       237 D~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        237 DYVEAMWLMLQQEK---PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             HHHHHHHHHHhcCC---CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            99999999998753   2689999999999999999999999964

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.97  E-value=1.5e-30  Score=238.74  Aligned_cols=213  Identities=18%  Similarity=0.267  Sum_probs=178.7

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCccE
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV  155 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d~  155 (349)
                      |||||    ||+||+|++++++|+++||+|++++|..                       ....|.+++.+++++.++|+
T Consensus         1 kilv~----G~tG~iG~~l~~~l~~~g~~v~~~~r~~-----------------------~d~~~~~~~~~~~~~~~~d~   53 (287)
T TIGR01214         1 RILIT----GANGQLGRELVQQLSPEGRVVVALTSSQ-----------------------LDLTDPEALERLLRAIRPDA   53 (287)
T ss_pred             CEEEE----cCCCHHHHHHHHHHHhcCCEEEEeCCcc-----------------------cCCCCHHHHHHHHHhCCCCE
Confidence            58999    9999999999999999999999999852                       11126788999998888999


Q ss_pred             EEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CCChHHHH
Q 018900          156 VLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVE  215 (349)
Q Consensus       156 Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k~~~e  215 (349)
                      |||+++.                |+.++.+++++|++.+. +||++||..+|+...+.+++|+.+..+    ..+|..+|
T Consensus        54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E  132 (287)
T TIGR01214        54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGE  132 (287)
T ss_pred             EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHH
Confidence            9999973                35679999999998885 899999999998866678888776543    35678889


Q ss_pred             HHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       216 k~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                      ++++..+.+++++||+++||++....++..++..+..++++.+.++  +.++++|++|+++++..+++.+... +++||+
T Consensus       133 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~-~~~~ni  209 (287)
T TIGR01214       133 QAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARA-RGVYHL  209 (287)
T ss_pred             HHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCC-CCeEEE
Confidence            9998889999999999999998655566677777777777776653  5688999999999999999886433 379999


Q ss_pred             eCCCccCHHHHHHHHHHHhCCCce
Q 018900          296 VSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       296 ~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      ++++.+++.|+++.+++.+|.+..
T Consensus       210 ~~~~~~s~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       210 ANSGQCSWYEFAQAIFEEAGADGL  233 (287)
T ss_pred             ECCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999999999999997643

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.97  E-value=9.2e-31  Score=242.10  Aligned_cols=238  Identities=20%  Similarity=0.244  Sum_probs=180.8

Q ss_pred             EEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCccEEE
Q 018900           78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVL  157 (349)
Q Consensus        78 LVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d~Vi  157 (349)
                      |||    ||+||||++|+++|+++|++|+++.+..                      +.+..|.+++.++++..++|+||
T Consensus         1 lIt----Ga~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~~~l~~~~~~~~~d~Vi   54 (306)
T PLN02725          1 FVA----GHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQADVEAFFAKEKPTYVI   54 (306)
T ss_pred             Ccc----cCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCHHHHHHHHhccCCCEEE
Confidence            689    9999999999999999999887665432                      11223678899998888899999


Q ss_pred             eCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC----CCCC-----CCCh
Q 018900          158 DNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKP-----DAGH  211 (349)
Q Consensus       158 ~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~-----~~~k  211 (349)
                      |+|+.                 |+.++.+++++|++.++++||++||..||+...+.+++|++    +..+     ..+|
T Consensus        55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  134 (306)
T PLN02725         55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAK  134 (306)
T ss_pred             EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHH
Confidence            99862                 45679999999999999999999999999976667888875    2222     2346


Q ss_pred             HHHHHHHH----hhCCcEEEEecCceeeCCCC-----CCchHHHHH----HHHhCCCccc-CCCCCcceeeeeHHHHHHH
Q 018900          212 VQVEKYIS----ENFSNWASFRPQYMIGSGNN-----KDCEEWFFD----RIVRKRPVPI-PGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       212 ~~~ek~~~----~~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~  277 (349)
                      +.+|++++    +.+++++++||+++|||+..     ...+..++.    ....+.++.+ ++++++.++|+|++|++++
T Consensus       135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~  214 (306)
T PLN02725        135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA  214 (306)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence            66666554    34899999999999999753     123333333    3345666655 7888889999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCcc--ccCCCcccee
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAK--KAFPFRNMVF  343 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~--k~~g~~p~~~  343 (349)
                      ++.++++...  ++.||+++++.+++.|+++.+.+.+|.+.++...+....     ..+.+  +.+||+|++-
T Consensus       215 ~~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~  285 (306)
T PLN02725        215 VVFLMRRYSG--AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLRSLGWDPKFS  285 (306)
T ss_pred             HHHHHhcccc--CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHHHhCCCCCCC
Confidence            9999987543  367899999999999999999999998766554322221     12222  3499999863

>PLN02240 UDP-glucose 4-epimerase

Probab=99.97  E-value=3.3e-30  Score=243.26  Aligned_cols=265  Identities=17%  Similarity=0.214  Sum_probs=191.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+||+|++++++|+++|++|++++|............ .........+++++.+|   ++++..++.
T Consensus         4 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          4 MGRTILVT----GGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRV-KELAGDLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHH-HHhhcccCccceEEecCcCCHHHHHHHHH
Confidence            45799999    99999999999999999999999987542211000000 00000011245666666   677777777


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CC
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DA  209 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~  209 (349)
                      ..++|+|||+++.                |+.++.+++++|++.++++||++||.++|+...+.+++|+.+..+    ..
T Consensus        79 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~  158 (352)
T PLN02240         79 STRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGR  158 (352)
T ss_pred             hCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHH
Confidence            6678999999973                356788999999999999999999999999766667888776654    35


Q ss_pred             ChHHHHHHHHh-----hCCcEEEEecCceeeCCCC----------CCchHHHHHHHHhCC--CcccCC------CCCcce
Q 018900          210 GHVQVEKYISE-----NFSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVRKR--PVPIPG------SGMQFT  266 (349)
Q Consensus       210 ~k~~~ek~~~~-----~~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~~~~--~~~~~~------~~~~~~  266 (349)
                      +|..+|+++++     .+++++++|++++||++..          ...+..++..+..++  ++.++|      +|.+.+
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  238 (352)
T PLN02240        159 TKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR  238 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEE
Confidence            67778887753     2578899999999997431          112233455555544  334444      678889


Q ss_pred             eeeeHHHHHHHHHHHhcCC---CccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---c
Q 018900          267 NIAHVRDLSSMLTLAVENP---EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---A  335 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~---~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~  335 (349)
                      +|+|++|++++++.+++..   ...++++||+++++.+|++|+++.+++.+|.+.++...+.+..     ..+..|   .
T Consensus       239 ~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~  318 (352)
T PLN02240        239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAEKE  318 (352)
T ss_pred             eeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCChhhhhcCHHHHHHH
Confidence            9999999999999988753   2233489999999999999999999999998877766554322     123333   4


Q ss_pred             CCCccce
Q 018900          336 FPFRNMV  342 (349)
Q Consensus       336 ~g~~p~~  342 (349)
                      +||+|++
T Consensus       319 lg~~p~~  325 (352)
T PLN02240        319 LGWKAKY  325 (352)
T ss_pred             hCCCCCC
Confidence            9999984

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.97  E-value=5.4e-30  Score=240.45  Aligned_cols=261  Identities=21%  Similarity=0.258  Sum_probs=186.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+||||++++++|+++|++|++++|.........    ....++...++.++.+|   .+.+.+++...
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   72 (338)
T PRK10675          1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVL----PVIERLGGKHPTFVEGDIRNEALLTEILHDH   72 (338)
T ss_pred             CeEEEE----CCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHH----HHHHHhcCCCceEEEccCCCHHHHHHHHhcC
Confidence            589999    99999999999999999999999987543221100    00011112234455555   56777778766


Q ss_pred             CccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC-C----CCCC
Q 018900          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-K----PDAG  210 (349)
Q Consensus       152 ~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~-~----~~~~  210 (349)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....+++|+.+. .    +..+
T Consensus        73 ~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~s  152 (338)
T PRK10675         73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_pred             CCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHH
Confidence            68999999873                3457889999999999999999999999997666677777664 2    2346


Q ss_pred             hHHHHHHHHhh-----CCcEEEEecCceeeCCCC------C----CchHHHHHHHHhCC--CcccCC------CCCccee
Q 018900          211 HVQVEKYISEN-----FSNWASFRPQYMIGSGNN------K----DCEEWFFDRIVRKR--PVPIPG------SGMQFTN  267 (349)
Q Consensus       211 k~~~ek~~~~~-----~~~~~ilR~~~v~g~~~~------~----~~~~~~~~~~~~~~--~~~~~~------~~~~~~~  267 (349)
                      |..+|++++++     +++++++|++++||+...      .    ..+..++.++..++  ++.+++      ++.+.++
T Consensus       153 K~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  232 (338)
T PRK10675        153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEe
Confidence            77778777642     678999999999997421      0    11223344454433  233433      5778899


Q ss_pred             eeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cCCC
Q 018900          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AFPF  338 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~g~  338 (349)
                      |+|++|+|++++.++++.. ..++++||+++++.+++.|+++.+.+.+|.+.++...+....     ..+..|   .+||
T Consensus       233 ~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  312 (338)
T PRK10675        233 YIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNW  312 (338)
T ss_pred             eEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHHHHHHHhCC
Confidence            9999999999999998632 223479999999999999999999999998877665543222     223333   4899


Q ss_pred             cccee
Q 018900          339 RNMVF  343 (349)
Q Consensus       339 ~p~~~  343 (349)
                      +|++-
T Consensus       313 ~p~~~  317 (338)
T PRK10675        313 RVTRT  317 (338)
T ss_pred             CCcCc
Confidence            99753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=7.7e-30  Score=236.66  Aligned_cols=255  Identities=16%  Similarity=0.195  Sum_probs=190.5

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhhc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +||||    ||||++|++++++|+++|  ++|++++|........      ....+ ...+++++.+|   ++++.++++
T Consensus         1 ~ilIt----GatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   70 (317)
T TIGR01181         1 RILVT----GGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLE------NLADLEDNPRYRFVKGDIGDRELVSRLFT   70 (317)
T ss_pred             CEEEE----cCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhh------hhhhhccCCCcEEEEcCCcCHHHHHHHHh
Confidence            59999    999999999999999987  7899888743111100      00011 11246666666   677888888


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCc-EEEEeccccccCCCCCC-CCCCCCCCCC----
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEP-PHVEGDVVKP----  207 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~-~~~e~~~~~~----  207 (349)
                      +.++|+|||+++.                |+.++.+++++|++.+.+ ++|++||..+||..... ++.|..+..+    
T Consensus        71 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y  150 (317)
T TIGR01181        71 EHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPY  150 (317)
T ss_pred             hcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCch
Confidence            7668999999973                456788999999987543 89999999999975432 5666655433    


Q ss_pred             CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHh
Q 018900          208 DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (349)
Q Consensus       208 ~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  282 (349)
                      ..+|..+|.++++    .+++++++||+.+|||.... .++..++..+..++++++++++++.++|+|++|+++++..++
T Consensus       151 ~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~  230 (317)
T TIGR01181       151 SASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVL  230 (317)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHH
Confidence            3567777776653    48999999999999997643 467778888888888888898989999999999999999999


Q ss_pred             cCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEc-CCCc-----cCCCccc---cCCCccce
Q 018900          283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-DPKA-----AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       283 ~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~-~~~~-----~~~~~~k---~~g~~p~~  342 (349)
                      ++...  +++||+++++.+++.|+++.+.+.+|.+...... +...     ...+..|   .+||+|++
T Consensus       231 ~~~~~--~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~  297 (317)
T TIGR01181       231 EKGRV--GETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKY  297 (317)
T ss_pred             cCCCC--CceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCC
Confidence            86543  4799999999999999999999999975433221 1111     1233333   49999975

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=9.1e-31  Score=232.65  Aligned_cols=260  Identities=19%  Similarity=0.239  Sum_probs=202.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~~  148 (349)
                      .++||||    ||.||||+|.+.+|+++||.|++++.-......    ...+..++..  ..+.++.+|   .+.|+++|
T Consensus         2 ~~~VLVt----GgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~----sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF   73 (343)
T KOG1371|consen    2 GKHVLVT----GGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLE----SLKRVRQLLGEGKSVFFVEGDLNDAEALEKLF   73 (343)
T ss_pred             CcEEEEe----cCCcceehHHHHHHHhCCCcEEEEecccccchh----HHHHHHHhcCCCCceEEEEeccCCHHHHHHHH
Confidence            5789999    999999999999999999999999964432211    1113334444  567777766   78899999


Q ss_pred             cCCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCC-----C
Q 018900          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-----P  207 (349)
Q Consensus       149 ~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~-----~  207 (349)
                      +..++|.|+|+|+                .|+.++.++++.|++.+++.+|+.||+.|||.+...|+.|+.+..     +
T Consensus        74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~py  153 (343)
T KOG1371|consen   74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPY  153 (343)
T ss_pred             hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcc
Confidence            9999999999998                478999999999999999999999999999999999999988765     2


Q ss_pred             CCChHHHHHHHHhh----CCcEEEEecCceee--CCCCCC---------chHHHHHHHHh---------CCCcccCCCCC
Q 018900          208 DAGHVQVEKYISEN----FSNWASFRPQYMIG--SGNNKD---------CEEWFFDRIVR---------KRPVPIPGSGM  263 (349)
Q Consensus       208 ~~~k~~~ek~~~~~----~~~~~ilR~~~v~g--~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~  263 (349)
                      .++|+..|+++...    ++..++||..+++|  |....+         ..+ .+.++..         +++.+.. +|+
T Consensus       154 g~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~-dgt  231 (343)
T KOG1371|consen  154 GKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTI-DGT  231 (343)
T ss_pred             hhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCccccc-CCC
Confidence            46777788877765    67889999999999  322111         222 2222222         3333332 457


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCccCCC--------ccc
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID--------AKK  334 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~~~~--------~~k  334 (349)
                      ..+++||+-|+|+.++.++.+... ..-++||++++...++.||+..++++.|.++++..++.+.-+..        +.+
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~  311 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQR  311 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHH
Confidence            889999999999999999998765 23359999999999999999999999999999888877443322        244


Q ss_pred             cCCCcccee
Q 018900          335 AFPFRNMVF  343 (349)
Q Consensus       335 ~~g~~p~~~  343 (349)
                      +|||+|.+-
T Consensus       312 elgwk~~~~  320 (343)
T KOG1371|consen  312 ELGWKAKYG  320 (343)
T ss_pred             HhCCccccC
Confidence            599999874

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3.3e-30  Score=224.00  Aligned_cols=259  Identities=21%  Similarity=0.253  Sum_probs=201.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCC--CCcccCCCCCCCcccceecCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~  145 (349)
                      ..++||||    ||.||||++.+..+...  .+..+.++.-.  .+...+..       -...++.+++.+|   ...+.
T Consensus         5 ~~~~vlIt----gg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~-------~~n~p~ykfv~~di~~~~~~~   73 (331)
T KOG0747|consen    5 KEKNVLIT----GGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEP-------VRNSPNYKFVEGDIADADLVL   73 (331)
T ss_pred             ccceEEEe----cCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhh-------hccCCCceEeeccccchHHHH
Confidence            34899999    99999999999999987  45666555321  01111110       1123467777777   44556


Q ss_pred             hhhcCCCccEEEeCCC----------------CChhhHHHHHHHHHhC-CCcEEEEeccccccCCCCCCCCC-CCCCCCC
Q 018900          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV-EGDVVKP  207 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~~~~~~~-e~~~~~~  207 (349)
                      .++...++|.|+|+|+                .|+.++..++++++.. ++++|||+||..|||++.+.... |...+.|
T Consensus        74 ~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nP  153 (331)
T KOG0747|consen   74 YLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNP  153 (331)
T ss_pred             hhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCC
Confidence            6666667999999998                4788999999999999 48999999999999998876666 6665555


Q ss_pred             C----CChHHHHHHHHhh----CCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          208 D----AGHVQVEKYISEN----FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       208 ~----~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      .    ++|.++|.+++.+    +++++++|.++||||+.... .++.|+..+..+++.++.|+|.+.++|+|++|+++++
T Consensus       154 tnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~  233 (331)
T KOG0747|consen  154 TNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF  233 (331)
T ss_pred             CCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence            3    5677777777654    89999999999999998765 8888999899999999999999999999999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC-------CceeEEcCCCcc-----CCCc--cccCCCccceee
Q 018900          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-------PVEIVHYDPKAA-----GIDA--KKAFPFRNMVFI  344 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~-------~~~~~~~~~~~~-----~~~~--~k~~g~~p~~~~  344 (349)
                      ..++++...  |++|||+++..++..|+++.+.+.+..       +..+.+++.+..     -++.  -|.+||+|+.=|
T Consensus       234 ~~v~~Kg~~--geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~  311 (331)
T KOG0747|consen  234 KAVLEKGEL--GEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPW  311 (331)
T ss_pred             HHHHhcCCc--cceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcH
Confidence            999999553  599999999999999999999998765       233444554433     1222  335999998754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.5e-29  Score=238.57  Aligned_cols=260  Identities=17%  Similarity=0.116  Sum_probs=191.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+||||+++++.|+++|++|++++|+.........    .. . ....++.+.+|   .+++.++++
T Consensus         3 ~~k~ilIt----GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~-~-~~~~~~~~~~Dl~~~~~~~~~~~   72 (349)
T TIGR02622         3 QGKKVLVT----GHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFE----LL-N-LAKKIEDHFGDIRDAAKLRKAIA   72 (349)
T ss_pred             CCCEEEEE----CCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHH----HH-h-hcCCceEEEccCCCHHHHHHHHh
Confidence            46899999    999999999999999999999999997643321100    00 0 01234455555   677888888


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCC-CCCCCCCCCCC----C
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-EPPHVEGDVVK----P  207 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~-~~~~~e~~~~~----~  207 (349)
                      +.++|+|||+|+.                |+.++.++++++++.+ +++||++||..+|+... ..++.|+.+..    +
T Consensus        73 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y  152 (349)
T TIGR02622        73 EFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPY  152 (349)
T ss_pred             hcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcc
Confidence            8779999999982                5778999999999887 78999999999998643 23456654432    3


Q ss_pred             CCChHHHHHHHHhh-----------CCcEEEEecCceeeCCCC--CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          208 DAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNN--KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       208 ~~~k~~~ek~~~~~-----------~~~~~ilR~~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                      ..+|..+|.+++.+           +++++++||+++|||+..  ..+++.++..+..+.++.+ +++++.++|+|++|+
T Consensus       153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~  231 (349)
T TIGR02622       153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEP  231 (349)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHH
Confidence            45788888777542           789999999999999753  2467788888888887765 568899999999999


Q ss_pred             HHHHHHHhcCCC---ccCCCEEEeeCC--CccCHHHHHHHHHHHhC-CCceeEEcCC--Cc-----cCCCccc---cCCC
Q 018900          275 SSMLTLAVENPE---AASSNIFNLVSD--RAVTLDGMAKLCAQAAG-LPVEIVHYDP--KA-----AGIDAKK---AFPF  338 (349)
Q Consensus       275 a~~~~~~~~~~~---~~~~~~~~i~~~--~~~t~~el~~~~~~~~g-~~~~~~~~~~--~~-----~~~~~~k---~~g~  338 (349)
                      +++++.++++..   ...+++||++++  +.++..|+++.+.+.++ .++.+...+.  ..     ...+..|   .+||
T Consensus       232 a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw  311 (349)
T TIGR02622       232 LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGW  311 (349)
T ss_pred             HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCC
Confidence            999998887531   112379999974  68999999999998765 4444433211  11     1234444   3899


Q ss_pred             cccee
Q 018900          339 RNMVF  343 (349)
Q Consensus       339 ~p~~~  343 (349)
                      +|++-
T Consensus       312 ~p~~~  316 (349)
T TIGR02622       312 HPRWG  316 (349)
T ss_pred             CCCCC
Confidence            99863

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.97  E-value=4.4e-30  Score=238.07  Aligned_cols=246  Identities=17%  Similarity=0.229  Sum_probs=174.0

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hh-HHhhhcC--
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AE-VGNVVGG--  150 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~-l~~~~~~--  150 (349)
                      ||||    ||+||||++|+++|+++|++++++.|+.......        ..+    .+....|.   ++ +..++.+  
T Consensus         2 ilVt----Ga~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~----~~~~~~d~~~~~~~~~~~~~~~~   65 (308)
T PRK11150          2 IIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNL----VDLDIADYMDKEDFLAQIMAGDD   65 (308)
T ss_pred             EEEe----cCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------Hhh----hhhhhhhhhhHHHHHHHHhcccc
Confidence            8999    9999999999999999999877777664321100        000    11112232   22 3333332  


Q ss_pred             -CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CCCh
Q 018900          151 -VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGH  211 (349)
Q Consensus       151 -~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k  211 (349)
                       .++|+|||+|+.              |+.++.+++++|++.++ +|||+||..+|+.....+..|+.+..|    ..+|
T Consensus        66 ~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  144 (308)
T PRK11150         66 FGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSK  144 (308)
T ss_pred             cCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHH
Confidence             257999999872              56789999999999987 799999999999765556666655443    3457


Q ss_pred             HHHHHHHHhh----CCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccC-CCCCcceeeeeHHHHHHHHHHH
Q 018900          212 VQVEKYISEN----FSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLA  281 (349)
Q Consensus       212 ~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~  281 (349)
                      +.+|++++++    +++++++|++++|||+....     ....+...+.++.+..++ ++++..++|+|++|++++++.+
T Consensus       145 ~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~  224 (308)
T PRK11150        145 FLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWF  224 (308)
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHH
Confidence            7777766654    88999999999999986432     233445667777655444 6667789999999999999999


Q ss_pred             hcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC-ceeEEcCCCc-------cCCCccc--cCCCccce
Q 018900          282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKA-------AGIDAKK--AFPFRNMV  342 (349)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~-~~~~~~~~~~-------~~~~~~k--~~g~~p~~  342 (349)
                      ++...   +++||+++++.+++.|+++.+.+.+|.. +.....+...       ...+..|  .+||+|..
T Consensus       225 ~~~~~---~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~  292 (308)
T PRK11150        225 WENGV---SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPF  292 (308)
T ss_pred             HhcCC---CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhcCCCCCC
Confidence            88643   3699999999999999999999999853 3333333211       1133333  38999863

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.97  E-value=4.8e-30  Score=238.83  Aligned_cols=218  Identities=18%  Similarity=0.267  Sum_probs=171.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    |||||+|++++++|+++||+|++++|+.+...           .+...+++++.+|   ++++.++++++
T Consensus         1 MkIlVt----GatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-----------~l~~~~v~~v~~Dl~d~~~l~~al~g~   65 (317)
T CHL00194          1 MSLLVI----GATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-----------FLKEWGAELVYGDLSLPETLPPSFKGV   65 (317)
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-----------hHhhcCCEEEECCCCCHHHHHHHHCCC
Confidence            589999    99999999999999999999999999864321           1123467888887   67788888875


Q ss_pred             CccEEEeCCC-----------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh
Q 018900          152 TFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (349)
Q Consensus       152 ~~d~Vi~~a~-----------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~  220 (349)
                        |+|||+++           .|+.++.+++++|++.|++|||++|+.+.+....         ......|..+|+++++
T Consensus        66 --d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~---------~~~~~~K~~~e~~l~~  134 (317)
T CHL00194         66 --TAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPY---------IPLMKLKSDIEQKLKK  134 (317)
T ss_pred             --CEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCC---------ChHHHHHHHHHHHHHH
Confidence              99999876           2567889999999999999999999965432110         1122468899999999


Q ss_pred             hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCc
Q 018900          221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (349)
Q Consensus       221 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~  300 (349)
                      .+++++++||+++|+..     +..+...+..+.+..+. .+++.+++||++|+|++++.+++++... +++||+++++.
T Consensus       135 ~~l~~tilRp~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~~-~~~~ni~g~~~  207 (317)
T CHL00194        135 SGIPYTIFRLAGFFQGL-----ISQYAIPILEKQPIWIT-NESTPISYIDTQDAAKFCLKSLSLPETK-NKTFPLVGPKS  207 (317)
T ss_pred             cCCCeEEEeecHHhhhh-----hhhhhhhhccCCceEec-CCCCccCccCHHHHHHHHHHHhcCcccc-CcEEEecCCCc
Confidence            99999999999888632     22223333445555443 3566789999999999999999886654 48999999999


Q ss_pred             cCHHHHHHHHHHHhCCCceeEEcCC
Q 018900          301 VTLDGMAKLCAQAAGLPVEIVHYDP  325 (349)
Q Consensus       301 ~t~~el~~~~~~~~g~~~~~~~~~~  325 (349)
                      +|+.|+++.+.+.+|.++++.++|.
T Consensus       208 ~s~~el~~~~~~~~g~~~~~~~vp~  232 (317)
T CHL00194        208 WNSSEIISLCEQLSGQKAKISRVPL  232 (317)
T ss_pred             cCHHHHHHHHHHHhCCCCeEEeCCH
Confidence            9999999999999999888877664

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=3.6e-29  Score=235.25  Aligned_cols=225  Identities=17%  Similarity=0.154  Sum_probs=166.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++++||||    ||+||||++++++|+++||+|++++|+.+.....      ....+.  ..+++++.+|   .+++.+
T Consensus         8 ~~~~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~   77 (342)
T PLN02214          8 PAGKTVCVT----GAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT------HLRELEGGKERLILCKADLQDYEALKA   77 (342)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH------HHHHhhCCCCcEEEEecCcCChHHHHH
Confidence            357899999    9999999999999999999999999976432110      000110  1235556666   667788


Q ss_pred             hhcCCCccEEEeCCCC-----------ChhhHHHHHHHHHhCCCcEEEEeccc-cccCCCCC---CCCCCCCC------C
Q 018900          147 VVGGVTFDVVLDNNGK-----------NLDAVRPVADWAKSSGVKQFLFISSA-GIYKPADE---PPHVEGDV------V  205 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~-----------~~~~~~~ll~~a~~~gv~~~i~~Ss~-~vy~~~~~---~~~~e~~~------~  205 (349)
                      ++++  +|+|||+|+.           |+.++.+++++|++.+++|||++||. .+||....   .+++|+.+      .
T Consensus        78 ~~~~--~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~  155 (342)
T PLN02214         78 AIDG--CDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK  155 (342)
T ss_pred             HHhc--CCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcc
Confidence            8876  5999999983           57789999999999999999999996 58975332   24677642      1


Q ss_pred             ----CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC---chHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          206 ----KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       206 ----~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                          .|..+|+.+|+++.+    ++++++++||+++|||+....   .+..++ .+..+... .++  ++.++|||++|+
T Consensus       156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~-~~~--~~~~~~i~V~Dv  231 (342)
T PLN02214        156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAK-TYA--NLTQAYVDVRDV  231 (342)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCcc-cCC--CCCcCeeEHHHH
Confidence                123457777777654    389999999999999986532   122222 34445433 233  456899999999


Q ss_pred             HHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      |++++.+++++..  ++.||++++ .+++.|+++.+++.++
T Consensus       232 a~a~~~al~~~~~--~g~yn~~~~-~~~~~el~~~i~~~~~  269 (342)
T PLN02214        232 ALAHVLVYEAPSA--SGRYLLAES-ARHRGEVVEILAKLFP  269 (342)
T ss_pred             HHHHHHHHhCccc--CCcEEEecC-CCCHHHHHHHHHHHCC
Confidence            9999999998654  358999874 6899999999999986

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=5.9e-29  Score=234.80  Aligned_cols=228  Identities=17%  Similarity=0.173  Sum_probs=174.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCC--CcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDE--NSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~--~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~  147 (349)
                      ||||||    ||+||||++++++|+++|++ |++++|...  ....+.        .+. ...++++.+|   .+++.++
T Consensus         1 mkilIT----GgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d~~~~~~~   68 (352)
T PRK10084          1 MKILVT----GGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA--------DVSDSERYVFEHADICDRAELDRI   68 (352)
T ss_pred             CeEEEE----CCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH--------hcccCCceEEEEecCCCHHHHHHH
Confidence            489999    99999999999999999976 555554321  111100        000 1234445555   6778888


Q ss_pred             hcCCCccEEEeCCC----------------CChhhHHHHHHHHHhC---------CCcEEEEeccccccCCCC-------
Q 018900          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSS---------GVKQFLFISSAGIYKPAD-------  195 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~---------gv~~~i~~Ss~~vy~~~~-------  195 (349)
                      +...++|+|||+|+                .|+.++.+++++|++.         ++++||++||..+|+...       
T Consensus        69 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (352)
T PRK10084         69 FAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVEN  148 (352)
T ss_pred             HHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccc
Confidence            87667899999998                2577899999999874         467999999999998631       


Q ss_pred             --C-CCCCCCCCCCC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCC
Q 018900          196 --E-PPHVEGDVVKP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       196 --~-~~~~e~~~~~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                        . .++.|+.+..+    ..+|..+|.+++.    ++++++++|++.+|||+... .++..++..+..+.++.++++++
T Consensus       149 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (352)
T PRK10084        149 SEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (352)
T ss_pred             cccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCC
Confidence              1 23566655433    3567777776654    48999999999999998643 36667778888888888889999


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      +.++|+|++|+++++..+++++..  +++||+++++.+++.|+++.+++.+|.
T Consensus       229 ~~~~~v~v~D~a~a~~~~l~~~~~--~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        229 QIRDWLYVEDHARALYKVVTEGKA--GETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             eEEeeEEHHHHHHHHHHHHhcCCC--CceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence            999999999999999999986433  489999999999999999999999985

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=9.9e-30  Score=226.14  Aligned_cols=205  Identities=28%  Similarity=0.479  Sum_probs=170.9

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCCCc
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~~~  153 (349)
                      ||||    ||+||+|++++++|+++|++|+.+.|........          ....+++++.+|   .+.+.++++..++
T Consensus         1 IlI~----GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~   66 (236)
T PF01370_consen    1 ILIT----GATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----------EKKLNVEFVIGDLTDKEQLEKLLEKANI   66 (236)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----------HHHTTEEEEESETTSHHHHHHHHHHHTE
T ss_pred             EEEE----ccCCHHHHHHHHHHHHcCCccccccccccccccc----------cccceEEEEEeeccccccccccccccCc
Confidence            7999    9999999999999999999999999987543210          000145555554   7888999988889


Q ss_pred             cEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHH
Q 018900          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQ  213 (349)
Q Consensus       154 d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~  213 (349)
                      |+|||+|+.                |+.++.+++++|++.++++||++||..+|+.....+++|+.+..+.    .+|..
T Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~  146 (236)
T PF01370_consen   67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRA  146 (236)
T ss_dssp             SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHH
T ss_pred             eEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999984                4678999999999999999999999999999877788888877432    34556


Q ss_pred             HHHHHHhh----CCcEEEEecCceeeCC----CCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCC
Q 018900          214 VEKYISEN----FSNWASFRPQYMIGSG----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (349)
Q Consensus       214 ~ek~~~~~----~~~~~ilR~~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  285 (349)
                      .|+++.++    +++++++||+.+|||.    ....++..++..+..++++.+++++++.++++|++|++++++.+++++
T Consensus       147 ~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  226 (236)
T PF01370_consen  147 AEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENP  226 (236)
T ss_dssp             HHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHS
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCC
Confidence            66666543    8999999999999999    445588889999999999999999999999999999999999999999


Q ss_pred             CccCCCEEEee
Q 018900          286 EAASSNIFNLV  296 (349)
Q Consensus       286 ~~~~~~~~~i~  296 (349)
                      .. .+++||++
T Consensus       227 ~~-~~~~yNig  236 (236)
T PF01370_consen  227 KA-AGGIYNIG  236 (236)
T ss_dssp             CT-TTEEEEES
T ss_pred             CC-CCCEEEeC
Confidence            83 35899986

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=2.8e-28  Score=225.99  Aligned_cols=247  Identities=27%  Similarity=0.411  Sum_probs=187.4

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVT  152 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~~  152 (349)
                      +||||    ||+||||++|+++|+++||+|++++|.........            .+++++.+|   .+...+......
T Consensus         2 ~ILVt----G~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~   65 (314)
T COG0451           2 RILVT----GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAKGVP   65 (314)
T ss_pred             eEEEE----cCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHhcCC
Confidence            49999    99999999999999999999999999875543211            345556655   344454554443


Q ss_pred             ccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCC-CCCCCCCC-CCCCC----CC
Q 018900          153 FDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEG-DVVKP----DA  209 (349)
Q Consensus       153 ~d~Vi~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~-~~~~~~e~-~~~~~----~~  209 (349)
                       |+|||+++.                 |+.++.+++++|++.++++|||.||.++|+.. ...++.|+ .+..|    ..
T Consensus        66 -d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~  144 (314)
T COG0451          66 -DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGV  144 (314)
T ss_pred             -CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHH
Confidence             999999882                 45779999999999999999998888877754 33367776 33333    34


Q ss_pred             ChHHHHHHHHhh----CCcEEEEecCceeeCCCCCC----chHHHHHHHHhCCC-cccCCCCCcceeeeeHHHHHHHHHH
Q 018900          210 GHVQVEKYISEN----FSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTL  280 (349)
Q Consensus       210 ~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~  280 (349)
                      +|+.+|+++.++    +++++++||+++|||+....    +...++..+..+.+ ..+.+++.+.++++|++|++++++.
T Consensus       145 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  224 (314)
T COG0451         145 SKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL  224 (314)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHH
Confidence            566677777665    59999999999999998764    44445666777776 5666788888999999999999999


Q ss_pred             HhcCCCccCCCEEEeeCCC-ccCHHHHHHHHHHHhCCCce-eEEcCC--C-----ccCCCc---cccCCCccce
Q 018900          281 AVENPEAASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVE-IVHYDP--K-----AAGIDA---KKAFPFRNMV  342 (349)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~-~~t~~el~~~~~~~~g~~~~-~~~~~~--~-----~~~~~~---~k~~g~~p~~  342 (349)
                      +++++..  + +||+++++ .+++.|+++.+.+.+|.+.. +...+.  .     ....+.   .+.+||+|+.
T Consensus       225 ~~~~~~~--~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~  295 (314)
T COG0451         225 ALENPDG--G-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKV  295 (314)
T ss_pred             HHhCCCC--c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCC
Confidence            9999876  3 99999997 89999999999999998766 333331  1     112222   3359999973

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=1.7e-28  Score=230.41  Aligned_cols=259  Identities=20%  Similarity=0.189  Sum_probs=176.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      +.++++||||    ||+||||++|+++|+++|++|++++|+.+........  ..+.+.  .+++++.+|   .+++.++
T Consensus         6 ~~~~~~vlIt----G~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~--~~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          6 PTGKKTACVI----GGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHL--RALQEL--GDLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCCCCeEEEE----CCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH--HhcCCC--CceEEEEcCCCChHHHHHH
Confidence            4457899999    9999999999999999999999999876432211000  000000  145667776   5667777


Q ss_pred             hcCCCccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCcEEEEeccccccCCCC----CCCCCCCCC---
Q 018900          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHVEGDV---  204 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~~----~~~~~e~~~---  204 (349)
                      +++  +|+|||+|+.               |+.++.++++++++. ++++||++||..+|+...    +.+++|+..   
T Consensus        78 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~  155 (338)
T PLN00198         78 IAG--CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDV  155 (338)
T ss_pred             Hhc--CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCch
Confidence            775  5999999982               466788999999876 589999999999998531    234444321   


Q ss_pred             ---------C-CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC---chHHHHHHHHhCCCcccCC-CCCc--
Q 018900          205 ---------V-KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPG-SGMQ--  264 (349)
Q Consensus       205 ---------~-~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~--  264 (349)
                               . .+..+|..+|+++.+    ++++++++||+++|||+....   .+ .++..+..++++.+.| ++.+  
T Consensus       156 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~  234 (338)
T PLN00198        156 EFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFLINGLKGMQML  234 (338)
T ss_pred             hhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccccccccccccc
Confidence                     1 134567777776654    489999999999999985432   22 2334556676666655 2322  


Q ss_pred             --ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC-CceeEEc--CC-CccCCCccc--cC
Q 018900          265 --FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHY--DP-KAAGIDAKK--AF  336 (349)
Q Consensus       265 --~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~-~~~~~~~--~~-~~~~~~~~k--~~  336 (349)
                        .++|+|++|++++++.+++.+..  ++.|+ ++++.+++.|+++.+.+.++. +.+....  +. .....+..|  .+
T Consensus       235 ~~~~~~i~V~D~a~a~~~~~~~~~~--~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  311 (338)
T PLN00198        235 SGSISITHVEDVCRAHIFLAEKESA--SGRYI-CCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISE  311 (338)
T ss_pred             cCCcceeEHHHHHHHHHHHhhCcCc--CCcEE-EecCCCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhC
Confidence              36999999999999999988654  24674 556679999999999999863 3332221  11 112233333  37


Q ss_pred             CCcccee
Q 018900          337 PFRNMVF  343 (349)
Q Consensus       337 g~~p~~~  343 (349)
                      ||+|++-
T Consensus       312 G~~p~~~  318 (338)
T PLN00198        312 GFSFEYG  318 (338)
T ss_pred             CceecCc
Confidence            9999863

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=4.5e-29  Score=238.05  Aligned_cols=233  Identities=18%  Similarity=0.231  Sum_probs=181.7

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ..++++||||    ||+||||++++++|+++|++|++++|+...........  .... ...+++++.+|   ++++..+
T Consensus        57 ~~~~~kVLVt----GatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~--~~~~-~~~~v~~v~~Dl~d~~~l~~~  129 (390)
T PLN02657         57 EPKDVTVLVV----GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKE--DTKK-ELPGAEVVFGDVTDADSLRKV  129 (390)
T ss_pred             CCCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhh--HHhh-hcCCceEEEeeCCCHHHHHHH
Confidence            4567899999    99999999999999999999999999875432110000  0000 11356677766   6778888


Q ss_pred             hcCC--CccEEEeCCCC-----------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHH
Q 018900          148 VGGV--TFDVVLDNNGK-----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (349)
Q Consensus       148 ~~~~--~~d~Vi~~a~~-----------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~  214 (349)
                      +++.  ++|+||||++.           |+.++.+++++|++.|++|||++||.++|++..     +     +..+|...
T Consensus       130 ~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~-----~-----~~~sK~~~  199 (390)
T PLN02657        130 LFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLL-----E-----FQRAKLKF  199 (390)
T ss_pred             HHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcch-----H-----HHHHHHHH
Confidence            8754  47999998762           457789999999999999999999998865321     1     12468888


Q ss_pred             HHHHHh--hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce-eeeeHHHHHHHHHHHhcCCCccCCC
Q 018900          215 EKYISE--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT-NIAHVRDLSSMLTLAVENPEAASSN  291 (349)
Q Consensus       215 ek~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~~~~~~~~~~~~~~~  291 (349)
                      |+.+.+  .+++++|+||+++||+.      ..++..+..++++.++|+|+..+ .+||++|+|++++.+++++...+ +
T Consensus       200 E~~l~~~~~gl~~tIlRp~~~~~~~------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~-~  272 (390)
T PLN02657        200 EAELQALDSDFTYSIVRPTAFFKSL------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKIN-K  272 (390)
T ss_pred             HHHHHhccCCCCEEEEccHHHhccc------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccC-C
Confidence            888876  79999999999999753      22456677788888889888755 58999999999999998765544 8


Q ss_pred             EEEeeCC-CccCHHHHHHHHHHHhCCCceeEEcCCCc
Q 018900          292 IFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       292 ~~~i~~~-~~~t~~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      +||++++ +.+|+.|+++++.+.+|+++++..+|...
T Consensus       273 ~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~  309 (390)
T PLN02657        273 VLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQI  309 (390)
T ss_pred             EEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHH
Confidence            9999986 68999999999999999998888877554

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.96  E-value=1.2e-28  Score=228.88  Aligned_cols=248  Identities=19%  Similarity=0.286  Sum_probs=178.4

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC--CCc
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG--VTF  153 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~--~~~  153 (349)
                      ||||    ||+||+|++++++|+++|+ +|++++|..... .        +.++....+..+..|.+.++.+...  .++
T Consensus         1 ilIt----GatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   67 (314)
T TIGR02197         1 IIVT----GGAGFIGSNLVKALNERGITDILVVDNLRDGH-K--------FLNLADLVIADYIDKEDFLDRLEKGAFGKI   67 (314)
T ss_pred             CEEe----CCcchhhHHHHHHHHHcCCceEEEEecCCCch-h--------hhhhhheeeeccCcchhHHHHHHhhccCCC
Confidence            6999    9999999999999999997 798888764321 1        1111100011112234455554431  358


Q ss_pred             cEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCC-----CCCChHHH
Q 018900          154 DVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-----PDAGHVQV  214 (349)
Q Consensus       154 d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~-----~~~~k~~~  214 (349)
                      |+|||+|+.              |+.++.+++++|++.++ +||++||.++|+.... ++.|++...     +..+|..+
T Consensus        68 D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~  145 (314)
T TIGR02197        68 EAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLF  145 (314)
T ss_pred             CEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHH
Confidence            999999972              56789999999999887 8999999999997643 455554322     22457778


Q ss_pred             HHHHHhh------CCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccC------CCCCcceeeeeHHHHHHH
Q 018900          215 EKYISEN------FSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIP------GSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       215 ek~~~~~------~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~v~Dva~~  277 (349)
                      |++++++      +++++++|++.+|||+...     .++.+++..+..+.++.++      ++|++.++|+|++|++++
T Consensus       146 e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~  225 (314)
T TIGR02197       146 DQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDV  225 (314)
T ss_pred             HHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHH
Confidence            8877652      4689999999999998542     2456677788888776554      467788999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEE--cCCCc-------cCCCccc---cCCCccce
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH--YDPKA-------AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~--~~~~~-------~~~~~~k---~~g~~p~~  342 (349)
                      ++.++.. ..  +++||++++++++++|+++.+.+.+|.+.++..  .|...       ...+..|   .+||+|+.
T Consensus       226 i~~~~~~-~~--~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~  299 (314)
T TIGR02197       226 NLWLLEN-GV--SGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFT  299 (314)
T ss_pred             HHHHHhc-cc--CceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcc
Confidence            9999988 32  379999999999999999999999998754443  33321       1133333   48999975

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.96  E-value=2.6e-29  Score=230.15  Aligned_cols=222  Identities=22%  Similarity=0.340  Sum_probs=171.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      ||||||    ||+|++|++|+++|.++|++|+++.|..-                       +..|.+.+.+++...++|
T Consensus         1 MriLI~----GasG~lG~~l~~~l~~~~~~v~~~~r~~~-----------------------dl~d~~~~~~~~~~~~pd   53 (286)
T PF04321_consen    1 MRILIT----GASGFLGSALARALKERGYEVIATSRSDL-----------------------DLTDPEAVAKLLEAFKPD   53 (286)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHTTTSEEEEEESTTCS------------------------TTSHHHHHHHHHHH--S
T ss_pred             CEEEEE----CCCCHHHHHHHHHHhhCCCEEEEeCchhc-----------------------CCCCHHHHHHHHHHhCCC
Confidence            799999    99999999999999999999999987631                       122788899999888899


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||||+.                |+.++.+++++|++.|+ ++||+||..||+...+.|+.|++.+.|.    .+|+.+
T Consensus        54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~  132 (286)
T PF04321_consen   54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEG  132 (286)
T ss_dssp             EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHH
T ss_pred             eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHH
Confidence            99999983                57889999999999997 9999999999988877889999888774    568888


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc--cCCCE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNI  292 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~  292 (349)
                      |+.+++...+++|+|++++||+ ...+++.++++.+..++.+.++.  ++.+++++++|+|+++..++++...  ..+++
T Consensus       133 E~~v~~~~~~~~IlR~~~~~g~-~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Gi  209 (286)
T PF04321_consen  133 EQAVRAACPNALILRTSWVYGP-SGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGI  209 (286)
T ss_dssp             HHHHHHH-SSEEEEEE-SEESS-SSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EE
T ss_pred             HHHHHHhcCCEEEEecceeccc-CCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhccccccccee
Confidence            9988887779999999999999 34467888888888888888765  5678999999999999999998643  22379


Q ss_pred             EEeeCCCccCHHHHHHHHHHHhCCCc-eeEEcCCCc
Q 018900          293 FNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKA  327 (349)
Q Consensus       293 ~~i~~~~~~t~~el~~~~~~~~g~~~-~~~~~~~~~  327 (349)
                      ||+++++.+++.|+++.+++.+|.+. .+..++...
T Consensus       210 yh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~  245 (286)
T PF04321_consen  210 YHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSE  245 (286)
T ss_dssp             EE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTT
T ss_pred             EEEecCcccCHHHHHHHHHHHhCCCCceEEeccccc
Confidence            99999999999999999999999876 566654444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=1.5e-28  Score=228.99  Aligned_cols=228  Identities=19%  Similarity=0.165  Sum_probs=165.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ..++||||    ||+||||++++++|+++||+|++++|+..........  ..... ...+++++.+|   ++.+..+++
T Consensus         3 ~~~~ilVt----GatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   75 (322)
T PLN02662          3 EGKVVCVT----GASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHL--LALDG-AKERLHLFKANLLEEGSFDSVVD   75 (322)
T ss_pred             CCCEEEEE----CChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHH--HhccC-CCCceEEEeccccCcchHHHHHc
Confidence            45789999    9999999999999999999999999976432211000  00000 01356677776   567888887


Q ss_pred             CCCccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCcEEEEecccc--ccCCC---CCCCCCCCCCCCC-
Q 018900          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAG--IYKPA---DEPPHVEGDVVKP-  207 (349)
Q Consensus       150 ~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~--vy~~~---~~~~~~e~~~~~~-  207 (349)
                      +  +|+|||+|+.               |+.++.+++++|++. +++|||++||.+  +|+..   .+.+++|+.+..+ 
T Consensus        76 ~--~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~  153 (322)
T PLN02662         76 G--CEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPA  153 (322)
T ss_pred             C--CCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChh
Confidence            6  4999999972               467899999999887 899999999976  46532   2235666654322 


Q ss_pred             ---------CCChHHHHHHHH----hhCCcEEEEecCceeeCCCCC--CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          208 ---------DAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       208 ---------~~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                               ..+|..+|+++.    +++++++++||+++|||+...  .....++..+..+.+.  .  +++.++|||++
T Consensus       154 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~  229 (322)
T PLN02662        154 FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVR  229 (322)
T ss_pred             HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHH
Confidence                     245666777654    358999999999999997543  2334455556555432  2  34678999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      |+|++++.+++++.. . +.||++ ++.++++|+++.+.+.++.
T Consensus       230 Dva~a~~~~~~~~~~-~-~~~~~~-g~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        230 DVANAHIQAFEIPSA-S-GRYCLV-ERVVHYSEVVKILHELYPT  270 (322)
T ss_pred             HHHHHHHHHhcCcCc-C-CcEEEe-CCCCCHHHHHHHHHHHCCC
Confidence            999999999998654 2 478887 4679999999999999874

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.2e-28  Score=228.15  Aligned_cols=228  Identities=16%  Similarity=0.159  Sum_probs=166.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+++||||    ||+||||++++++|+++||+|++++|+......+....  .... ...+++++.+|   .+.+.++++
T Consensus         4 ~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   76 (322)
T PLN02986          4 GGKLVCVT----GASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLL--ALDG-AKERLKLFKADLLEESSFEQAIE   76 (322)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHH--hccC-CCCceEEEecCCCCcchHHHHHh
Confidence            46899999    99999999999999999999999999765432211000  0000 01246667776   567788887


Q ss_pred             CCCccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCcEEEEecccccc--CCC---CCCCCCCCCCCC--
Q 018900          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVK--  206 (349)
Q Consensus       150 ~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy--~~~---~~~~~~e~~~~~--  206 (349)
                      +  +|+|||+|+.               |+.++.+++++|++. +++|||++||.++|  +..   .+.+++|+.+..  
T Consensus        77 ~--~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~  154 (322)
T PLN02986         77 G--CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPS  154 (322)
T ss_pred             C--CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChH
Confidence            6  5999999972               356789999999986 78999999998754  432   223466665422  


Q ss_pred             --------CCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          207 --------PDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       207 --------~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                              +..+|..+|+++.+    ++++++++||+++|||+....  ....++..+..+.+.  ++  .+.++|||++
T Consensus       155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~  230 (322)
T PLN02986        155 LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVR  230 (322)
T ss_pred             HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHH
Confidence                    33456667665543    589999999999999975432  233455566666543  33  4568999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      |+|++++.+++++.. + +.||++ ++.+++.|+++++.+.++.
T Consensus       231 Dva~a~~~al~~~~~-~-~~yni~-~~~~s~~e~~~~i~~~~~~  271 (322)
T PLN02986        231 DVALAHIKALETPSA-N-GRYIID-GPIMSVNDIIDILRELFPD  271 (322)
T ss_pred             HHHHHHHHHhcCccc-C-CcEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            999999999998755 2 589995 4579999999999999873

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=4.1e-28  Score=226.57  Aligned_cols=228  Identities=14%  Similarity=0.111  Sum_probs=167.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+|+||||    ||+||||++++++|+++|++|++++|+.+.........  .... ...+++++.+|   .+++.++++
T Consensus         4 ~~k~vlVt----G~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~~~~D~~d~~~~~~~~~   76 (325)
T PLN02989          4 GGKVVCVT----GASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLL--ALDG-AKERLKLFKADLLDEGSFELAID   76 (325)
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHH--hccC-CCCceEEEeCCCCCchHHHHHHc
Confidence            46899999    99999999999999999999999998865432110000  0000 01245666666   566777887


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCcEEEEeccccccCCC-----CCCCCCCCCCCC-
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA-----DEPPHVEGDVVK-  206 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~-----~~~~~~e~~~~~-  206 (349)
                      +  +|+|||+|+.                |+.++.+++++|++. ++++||++||..+|+..     ...+++|+.+.. 
T Consensus        77 ~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p  154 (325)
T PLN02989         77 G--CETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNP  154 (325)
T ss_pred             C--CCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCch
Confidence            5  5999999982                466789999999875 57899999998776542     223567765543 


Q ss_pred             ---------CCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          207 ---------PDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       207 ---------~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                               +..+|..+|+++..    ++++++++||+++|||+....  +...++..+..++...  +  .+.++|+|+
T Consensus       155 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v  230 (325)
T PLN02989        155 SFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDV  230 (325)
T ss_pred             hHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEH
Confidence                     33567777776654    489999999999999986542  4445566666665432  2  345789999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      +|+|++++.+++++..  +++||++ ++.++++|+++.+.+.++.
T Consensus       231 ~Dva~a~~~~l~~~~~--~~~~ni~-~~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        231 RDVALAHVKALETPSA--NGRYIID-GPVVTIKDIENVLREFFPD  272 (325)
T ss_pred             HHHHHHHHHHhcCccc--CceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            9999999999988654  3589996 4579999999999999984

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=5.1e-28  Score=228.36  Aligned_cols=229  Identities=17%  Similarity=0.198  Sum_probs=160.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ..++||||    ||+||||++++++|+++|++|++++|+.+....+....  .... ....++++.+|   .+.+.++++
T Consensus         4 ~~k~iLVT----GatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~v~~Dl~d~~~~~~~~~   76 (351)
T PLN02650          4 QKETVCVT----GASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL--DLPG-ATTRLTLWKADLAVEGSFDDAIR   76 (351)
T ss_pred             CCCEEEEe----CCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH--hccC-CCCceEEEEecCCChhhHHHHHh
Confidence            35789999    99999999999999999999999999764432211000  0000 00135566666   566777787


Q ss_pred             CCCccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CcEEEEeccccccCCC-CCCC-CCCCCC-------
Q 018900          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPA-DEPP-HVEGDV-------  204 (349)
Q Consensus       150 ~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~-~~~~-~~e~~~-------  204 (349)
                      +  +|+|||+|+.               |+.++.+++++|++.+ ++||||+||.++|+.. ...+ +.|+..       
T Consensus        77 ~--~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~  154 (351)
T PLN02650         77 G--CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCR  154 (351)
T ss_pred             C--CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhh
Confidence            6  5999999872               4568999999999887 7899999999877643 2223 455421       


Q ss_pred             ------CCCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHH--HhCCCcccCCCCCcceeeeeHH
Q 018900          205 ------VKPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       205 ------~~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                            ..|..+|..+|.++.+    ++++++++||+++|||+........++..+  ..++.. .++.. +.++|+|++
T Consensus       155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~r~~v~V~  232 (351)
T PLN02650        155 RKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSII-KQGQFVHLD  232 (351)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCcC-CCcceeeHH
Confidence                  1234567777776644    489999999999999986543333333322  223322 22222 347999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      |++++++.+++++..  ++.| +++++.+++.|+++++.+.++
T Consensus       233 Dva~a~~~~l~~~~~--~~~~-i~~~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        233 DLCNAHIFLFEHPAA--EGRY-ICSSHDATIHDLAKMLREKYP  272 (351)
T ss_pred             HHHHHHHHHhcCcCc--CceE-EecCCCcCHHHHHHHHHHhCc
Confidence            999999999988654  2478 566677999999999999886

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.96  E-value=2.3e-27  Score=220.93  Aligned_cols=258  Identities=21%  Similarity=0.279  Sum_probs=185.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVT  152 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~~  152 (349)
                      +||||    ||+|++|++++++|+++|++|++++|..........    .....  .+++++.+|   .+++.+++...+
T Consensus         1 kvlV~----GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   70 (328)
T TIGR01179         1 KILVT----GGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALK----RGERI--TRVTFVEGDLRDRELLDRLFEEHK   70 (328)
T ss_pred             CEEEe----CCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhh----hhccc--cceEEEECCCCCHHHHHHHHHhCC
Confidence            58999    999999999999999999999988764322111000    00010  135555565   677778887666


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CCChH
Q 018900          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHV  212 (349)
Q Consensus       153 ~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k~  212 (349)
                      +|+|||+++.                |+.++.+++++|++.++++||++||.++|+.....+++|+.+..+    ..+|.
T Consensus        71 ~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~  150 (328)
T TIGR01179        71 IDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKL  150 (328)
T ss_pred             CcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHH
Confidence            8999999973                467889999999999999999999999998766667777766543    34577


Q ss_pred             HHHHHHHh-----hCCcEEEEecCceeeCCCCC----------CchHHHHHHHH-hCCCcccC------CCCCcceeeee
Q 018900          213 QVEKYISE-----NFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIV-RKRPVPIP------GSGMQFTNIAH  270 (349)
Q Consensus       213 ~~ek~~~~-----~~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~  270 (349)
                      .+|.++.+     .+++++++||+.+||+....          .++..+..... ...++.++      +++++.++|||
T Consensus       151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  230 (328)
T TIGR01179       151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH  230 (328)
T ss_pred             HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence            77776654     48899999999999986422          12333333333 22333332      24667789999


Q ss_pred             HHHHHHHHHHHhcCCC-ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cCCCccc
Q 018900          271 VRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AFPFRNM  341 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~g~~p~  341 (349)
                      ++|++++++.++.... ...+++||+++++.+++.|+++.+++.+|.+.++...+....     ..+..|   .+||+|.
T Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~  310 (328)
T TIGR01179       231 VMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPK  310 (328)
T ss_pred             HHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCC
Confidence            9999999999997632 233589999999999999999999999999887765544321     123333   3899998


Q ss_pred             ee
Q 018900          342 VF  343 (349)
Q Consensus       342 ~~  343 (349)
                      +.
T Consensus       311 ~~  312 (328)
T TIGR01179       311 YT  312 (328)
T ss_pred             cc
Confidence            64

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=3e-28  Score=231.01  Aligned_cols=264  Identities=19%  Similarity=0.228  Sum_probs=182.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce--ecCCCeEEEcC---hhhHH
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~  145 (349)
                      ..++|+||||    ||+||||++++++|+++||+|++++|+.+....+....  .+.+.  ...+++++.+|   .+++.
T Consensus        50 ~~~~k~VLVT----GatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~--~~~~~~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         50 DAEARLVCVT----GGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREME--MFGEMGRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             CCCCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hhccccccCCceEEEEcCCCCHHHHH
Confidence            4567899999    99999999999999999999999998754322211000  00000  01235666666   56677


Q ss_pred             hhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCcEEEEeccc--cccCCC--CC--CCCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSA--GIYKPA--DE--PPHVEG  202 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~--~vy~~~--~~--~~~~e~  202 (349)
                      +++++  +|.|+|+++.                |+.++.+++++|++. +++||||+||.  .+|+..  ..  .+++|+
T Consensus       124 ~~i~~--~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~  201 (367)
T PLN02686        124 EAFDG--CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE  201 (367)
T ss_pred             HHHHh--ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence            88876  4999998762                466799999999986 79999999996  478642  21  235554


Q ss_pred             CCC----------CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          203 DVV----------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       203 ~~~----------~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      .+.          .+..+|..+|+++..    ++++++++||+++|||+........ +..+..+. ..+++++.  .+|
T Consensus       202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~-~~~~~~g~-~~~~g~g~--~~~  277 (367)
T PLN02686        202 SWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA-TIAYLKGA-QEMLADGL--LAT  277 (367)
T ss_pred             CCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh-HHHHhcCC-CccCCCCC--cCe
Confidence            321          123567778887643    4899999999999999854322112 22344443 55666654  569


Q ss_pred             eeHHHHHHHHHHHhcCC-CccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC------ccCCCccc---cCCC
Q 018900          269 AHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK------AAGIDAKK---AFPF  338 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~-~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~------~~~~~~~k---~~g~  338 (349)
                      +|++|++++++.+++.. ....+++| +++++.++++|+++.+.+.+|.+......+..      ....+..|   .++|
T Consensus       278 v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~  356 (367)
T PLN02686        278 ADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSR  356 (367)
T ss_pred             EEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHH
Confidence            99999999999999853 21224678 88888999999999999999987665443322      22334444   3999


Q ss_pred             ccceeeecc
Q 018900          339 RNMVFIFFY  347 (349)
Q Consensus       339 ~p~~~~~~~  347 (349)
                      +|+-.|..+
T Consensus       357 ~~~~~~~~~  365 (367)
T PLN02686        357 TRRCCYDES  365 (367)
T ss_pred             hhhcccccc
Confidence            998876543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.96  E-value=2.3e-27  Score=221.25  Aligned_cols=226  Identities=21%  Similarity=0.249  Sum_probs=170.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+||+|++++++|+++|++|++++|+.+....+           ...+++++.+|   .+++.+++++ 
T Consensus         1 ~~vlIt----G~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~l~~~~~~-   64 (328)
T TIGR03466         1 MKVLVT----GATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-----------EGLDVEIVEGDLRDPASLRKAVAG-   64 (328)
T ss_pred             CeEEEE----CCccchhHHHHHHHHHCCCEEEEEEecCcccccc-----------ccCCceEEEeeCCCHHHHHHHHhC-
Confidence            479999    9999999999999999999999999976543211           12246666666   6677777876 


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCC-CCCCCCCCCCCCCC-------CC
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKP-------DA  209 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~-~~~~~~~e~~~~~~-------~~  209 (349)
                       +|+|||+++.              |+.++.++++++++.++++||++||..+|+. ..+.+++|+.+..+       ..
T Consensus        65 -~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  143 (328)
T TIGR03466        65 -CRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKR  143 (328)
T ss_pred             -CCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHH
Confidence             4999999862              5678899999999999999999999999985 34457777765443       23


Q ss_pred             ChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcC
Q 018900          210 GHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (349)
Q Consensus       210 ~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  284 (349)
                      +|..+|+++++    ++++++++||+++||++.... ....++.....+.. +...  +...+++|++|+|++++.++++
T Consensus       144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~i~v~D~a~a~~~~~~~  220 (328)
T TIGR03466       144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKM-PAYV--DTGLNLVHVDDVAEGHLLALER  220 (328)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCC-ceee--CCCcceEEHHHHHHHHHHHHhC
Confidence            46667777665    389999999999999986432 22233444444332 2222  2336899999999999999988


Q ss_pred             CCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEc
Q 018900          285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY  323 (349)
Q Consensus       285 ~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~  323 (349)
                      +..  ++.|+++ ++.+++.|+++.+.+.+|.+.....+
T Consensus       221 ~~~--~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~  256 (328)
T TIGR03466       221 GRI--GERYILG-GENLTLKQILDKLAEITGRPAPRVKL  256 (328)
T ss_pred             CCC--CceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcC
Confidence            543  4788886 67899999999999999987554443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.96  E-value=4.1e-27  Score=212.73  Aligned_cols=230  Identities=20%  Similarity=0.270  Sum_probs=168.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++|+||    ||+||||+||+++||++||.|++++|+++..++...  ...++. ..++.+.+.+|   ++.++++++
T Consensus         5 ~~~~VcVT----GAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~--L~~l~~-a~~~l~l~~aDL~d~~sf~~ai~   77 (327)
T KOG1502|consen    5 EGKKVCVT----GASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEH--LRKLEG-AKERLKLFKADLLDEGSFDKAID   77 (327)
T ss_pred             CCcEEEEe----CCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHH--HHhccc-CcccceEEeccccccchHHHHHh
Confidence            67899999    999999999999999999999999999876332100  000111 12236666666   788999998


Q ss_pred             CCCccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CcEEEEeccccccC-C----CCCCCCCCCCCCCCC
Q 018900          150 GVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYK-P----ADEPPHVEGDVVKPD  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~-~----~~~~~~~e~~~~~~~  208 (349)
                      ++  |.|+|.|..               .+.|+.|++++|++.. |+|+||+||...-. .    .....++|+.+....
T Consensus        78 gc--dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~  155 (327)
T KOG1502|consen   78 GC--DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLD  155 (327)
T ss_pred             CC--CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHH
Confidence            86  999999983               4689999999999998 99999999965322 1    233466776654322


Q ss_pred             ----------CChHHHHH----HHHhhCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          209 ----------AGHVQVEK----YISENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       209 ----------~~k~~~ek----~~~~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                                .+|--+||    +.++.+++.+.+.|+.|+||...+.  .-...+...+.|..-...   +....|+|++
T Consensus       156 ~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVr  232 (327)
T KOG1502|consen  156 FCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP---NFWLAFVDVR  232 (327)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC---CCceeeEeHH
Confidence                      12333343    3444589999999999999987663  333445556666433322   2345699999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                      |+|++++.+++++...  +.|.|.+.. +++.|+++.+.+.+..-
T Consensus       233 DVA~AHv~a~E~~~a~--GRyic~~~~-~~~~ei~~~l~~~~P~~  274 (327)
T KOG1502|consen  233 DVALAHVLALEKPSAK--GRYICVGEV-VSIKEIADILRELFPDY  274 (327)
T ss_pred             HHHHHHHHHHcCcccC--ceEEEecCc-ccHHHHHHHHHHhCCCC
Confidence            9999999999999884  478888765 66999999999998753

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.95  E-value=3.6e-27  Score=216.42  Aligned_cols=219  Identities=25%  Similarity=0.296  Sum_probs=158.1

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCccEE
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV  156 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d~V  156 (349)
                      ||||    ||+||||++++++|+++|++|++++|+.+.......           ..+..+  +...+...+.+  +|+|
T Consensus         1 vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~~--~D~V   61 (292)
T TIGR01777         1 ILIT----GGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EGYKPW--APLAESEALEG--ADAV   61 (292)
T ss_pred             CEEE----cccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------eeeecc--cccchhhhcCC--CCEE
Confidence            6999    999999999999999999999999998765432110           011111  11333444544  6999


Q ss_pred             EeCCCC------------------ChhhHHHHHHHHHhCCCc--EEEEeccccccCCCCCCCCCCCCCCCCC----CChH
Q 018900          157 LDNNGK------------------NLDAVRPVADWAKSSGVK--QFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       157 i~~a~~------------------~~~~~~~ll~~a~~~gv~--~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~  212 (349)
                      ||+++.                  |+.++++++++|++.+++  +||+.|+.++|+.....++.|+.+..+.    ..+.
T Consensus        62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~  141 (292)
T TIGR01777        62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCR  141 (292)
T ss_pred             EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHH
Confidence            999973                  466799999999999863  6777788889997666678887643221    1122


Q ss_pred             HHHHHH---HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccC
Q 018900          213 QVEKYI---SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  289 (349)
Q Consensus       213 ~~ek~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  289 (349)
                      ..|..+   ++.+++++++||+++|||..+  ....++........ ..++++++.++++|++|+++++..+++++..  
T Consensus       142 ~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~--  216 (292)
T TIGR01777       142 DWEEAAQAAEDLGTRVVLLRTGIVLGPKGG--ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASI--  216 (292)
T ss_pred             HHHHHhhhchhcCCceEEEeeeeEECCCcc--hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCccc--
Confidence            334433   335899999999999999643  23333322221111 1257788899999999999999999987654  


Q ss_pred             CCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       290 ~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      +++||+++++.+++.|+++.+++.+|.+..
T Consensus       217 ~g~~~~~~~~~~s~~di~~~i~~~~g~~~~  246 (292)
T TIGR01777       217 SGPVNATAPEPVRNKEFAKALARALHRPAF  246 (292)
T ss_pred             CCceEecCCCccCHHHHHHHHHHHhCCCCc
Confidence            368999999999999999999999997643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.95  E-value=3.1e-27  Score=223.24  Aligned_cols=257  Identities=14%  Similarity=0.100  Sum_probs=172.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .+..|+||||    ||+||||++++++|+++|++|++++|+.+....+..    .+.  ...+++++.+|   .+.+.++
T Consensus         7 ~~~~~~vLVt----G~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~--~~~~~~~~~~Dl~~~~~~~~~   76 (353)
T PLN02896          7 ESATGTYCVT----GATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS----KWK--EGDRLRLFRADLQEEGSFDEA   76 (353)
T ss_pred             ccCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH----hhc--cCCeEEEEECCCCCHHHHHHH
Confidence            3457799999    999999999999999999999999987643321100    000  01246666776   5667777


Q ss_pred             hcCCCccEEEeCCCC------------------C-----hhhHHHHHHHHHhCC-CcEEEEeccccccCCCC-----CCC
Q 018900          148 VGGVTFDVVLDNNGK------------------N-----LDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-----EPP  198 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~------------------~-----~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~-----~~~  198 (349)
                      +.+  +|+|||+|+.                  |     +.++.+++++|++.+ +++||++||..+||...     ..+
T Consensus        77 ~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         77 VKG--CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             HcC--CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCc
Confidence            765  5999999983                  1     256889999998875 88999999999998532     134


Q ss_pred             CCCCCC--C-----------CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHHH---hCCCc--
Q 018900          199 HVEGDV--V-----------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIV---RKRPV--  256 (349)
Q Consensus       199 ~~e~~~--~-----------~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~---~~~~~--  256 (349)
                      ++|+.+  .           .|..+|+.+|+++.+    ++++++++||+++|||+.... +..++..+.   .+...  
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~  233 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS-VPSSIQVLLSPITGDSKLF  233 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC-CCchHHHHHHHhcCCcccc
Confidence            556521  1           234567777776654    489999999999999986533 222233332   33322  


Q ss_pred             ccCCCCC---cceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC-CceeEEcCCC----cc
Q 018900          257 PIPGSGM---QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPK----AA  328 (349)
Q Consensus       257 ~~~~~~~---~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~-~~~~~~~~~~----~~  328 (349)
                      ...+..+   ..++|||++|+|++++.+++.+..  +.+|++ +++.+++.|+++.+.+.++. ++.+...+..    ..
T Consensus       234 ~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~--~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~  310 (353)
T PLN02896        234 SILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA--EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPS  310 (353)
T ss_pred             ccccccccccCceeEEeHHHHHHHHHHHHhCCCc--CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccccccCcccc
Confidence            1222111   236999999999999999987543  246754 56779999999999999973 2322221111    11


Q ss_pred             --CCCccccCCCcccee
Q 018900          329 --GIDAKKAFPFRNMVF  343 (349)
Q Consensus       329 --~~~~~k~~g~~p~~~  343 (349)
                        +....+.+||+|++-
T Consensus       311 ~~~~~~~~~lGw~p~~~  327 (353)
T PLN02896        311 EISSKKLRDLGFEYKYG  327 (353)
T ss_pred             ccCHHHHHHcCCCccCC
Confidence              222223599999853

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=8.8e-27  Score=207.62  Aligned_cols=213  Identities=19%  Similarity=0.251  Sum_probs=186.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |+||||    |++|++|+.|++.|. .+++|++++|..                       ++..|++.+.+++...+||
T Consensus         1 M~iLi~----G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~~PD   52 (281)
T COG1091           1 MKILIT----GANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRETRPD   52 (281)
T ss_pred             CcEEEE----cCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhhCCC
Confidence            349999    999999999999998 779999999876                       1223889999999999999


Q ss_pred             EEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||+|+                +|..+..++.++|++.|. ++||+||..||+...+.|+.|++.+.|.    .+|+..
T Consensus        53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~G  131 (281)
T COG1091          53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAG  131 (281)
T ss_pred             EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHH
Confidence            9999999                467899999999999997 8999999999999888899999988774    678888


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~  294 (349)
                      |..+++++.+.+|+|.+++||... .+++.+|++...+++++.+..  +|..++++..|+|+++..++......  .+||
T Consensus       132 E~~v~~~~~~~~I~Rtswv~g~~g-~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~~--~~yH  206 (281)
T COG1091         132 EEAVRAAGPRHLILRTSWVYGEYG-NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKEG--GVYH  206 (281)
T ss_pred             HHHHHHhCCCEEEEEeeeeecCCC-CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhccccC--cEEE
Confidence            888888899999999999999876 557777888888888887764  57788999999999999999988763  4999


Q ss_pred             eeCCCccCHHHHHHHHHHHhCCCceeE
Q 018900          295 LVSDRAVTLDGMAKLCAQAAGLPVEIV  321 (349)
Q Consensus       295 i~~~~~~t~~el~~~~~~~~g~~~~~~  321 (349)
                      +++...+||.|+++.+.+.+|.+..+.
T Consensus       207 ~~~~g~~Swydfa~~I~~~~~~~~~v~  233 (281)
T COG1091         207 LVNSGECSWYEFAKAIFEEAGVDGEVI  233 (281)
T ss_pred             EeCCCcccHHHHHHHHHHHhCCCcccc
Confidence            999877999999999999998665443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=6.1e-26  Score=211.80  Aligned_cols=241  Identities=17%  Similarity=0.222  Sum_probs=173.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+||||++++++|+++|  ++|++++|+......+.       .++...+++++.+|   .+++.++
T Consensus         3 ~~k~vLVT----GatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~~v~~Dl~d~~~l~~~   71 (324)
T TIGR03589         3 NNKSILIT----GGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQ-------QKFPAPCLRFFIGDVRDKERLTRA   71 (324)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHH-------HHhCCCcEEEEEccCCCHHHHHHH
Confidence            46789999    999999999999999986  78999998754321110       01111245666666   6777777


Q ss_pred             hcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCCh
Q 018900          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k  211 (349)
                      +++  +|+|||+|+.                |+.++.+++++|++.++++||++||...+.     |.     ..+..+|
T Consensus        72 ~~~--iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~-----p~-----~~Y~~sK  139 (324)
T TIGR03589        72 LRG--VDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN-----PI-----NLYGATK  139 (324)
T ss_pred             Hhc--CCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC-----CC-----CHHHHHH
Confidence            766  5999999983                456899999999999999999999954321     11     1244578


Q ss_pred             HHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCC-CcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          212 VQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       212 ~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      ..+|++++.       .|++++++||+++|||+.  .++..+...+..+. ++++. ++.+.++|+|++|++++++.+++
T Consensus       140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG--SVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHHHHhhccccCcEEEEEeecceeCCCC--CcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHh
Confidence            888887643       489999999999999874  35666666666665 45654 57788999999999999999998


Q ss_pred             CCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc----cCCCcc---ccCCCccceee
Q 018900          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA----AGIDAK---KAFPFRNMVFI  344 (349)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~----~~~~~~---k~~g~~p~~~~  344 (349)
                      +..  ++++| +++++.+++.|+++.+.+..+.  ++....+.+    ...+..   +.+||+|++-+
T Consensus       217 ~~~--~~~~~-~~~~~~~sv~el~~~i~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l  279 (324)
T TIGR03589       217 RML--GGEIF-VPKIPSMKITDLAEAMAPECPH--KIVGIRPGEKLHEVMITEDDARHTYELGDYYAI  279 (324)
T ss_pred             hCC--CCCEE-ccCCCcEEHHHHHHHHHhhCCe--eEeCCCCCchhHhhhcChhhhhhhcCCCCeEEE
Confidence            743  24788 4666679999999999997532  222222211    112333   34999998754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=5.8e-26  Score=208.21  Aligned_cols=217  Identities=16%  Similarity=0.200  Sum_probs=164.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC----C
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG----V  151 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~----~  151 (349)
                      +||||    ||||++|++++++|+++|++|++++|++++....           ....+..++.|++++..++..    .
T Consensus         1 ~ilVt----GatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~d~~d~~~l~~a~~~~~~~~   65 (285)
T TIGR03649         1 TILLT----GGTGKTASRIARLLQAASVPFLVASRSSSSSAGP-----------NEKHVKFDWLDEDTWDNPFSSDDGME   65 (285)
T ss_pred             CEEEE----cCCChHHHHHHHHHHhCCCcEEEEeCCCccccCC-----------CCccccccCCCHHHHHHHHhcccCcC
Confidence            58999    9999999999999999999999999987643210           001223444568888888832    2


Q ss_pred             C-ccEEEeCCCC---ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhh-CCcEE
Q 018900          152 T-FDVVLDNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWA  226 (349)
Q Consensus       152 ~-~d~Vi~~a~~---~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~-~~~~~  226 (349)
                      + +|.|+|+++.   ......+++++|++.|++|||++|+.+++...              ..+...|+++++. +++++
T Consensus        66 g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~--------------~~~~~~~~~l~~~~gi~~t  131 (285)
T TIGR03649        66 PEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG--------------PAMGQVHAHLDSLGGVEYT  131 (285)
T ss_pred             CceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC--------------chHHHHHHHHHhccCCCEE
Confidence            2 5999999874   24678899999999999999999987653211              1244568888886 99999


Q ss_pred             EEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHH
Q 018900          227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  306 (349)
Q Consensus       227 ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el  306 (349)
                      ++||+++++......    +...+..+..+. .+.++...+|||++|+|++++.++.++...+ ++|++.+++.+|+.|+
T Consensus       132 ilRp~~f~~~~~~~~----~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~-~~~~l~g~~~~s~~ei  205 (285)
T TIGR03649       132 VLRPTWFMENFSEEF----HVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPN-TDYVVLGPELLTYDDV  205 (285)
T ss_pred             EEeccHHhhhhcccc----cccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCC-CeEEeeCCccCCHHHH
Confidence            999999886532110    122233334333 3456778899999999999999999875544 7999999999999999


Q ss_pred             HHHHHHHhCCCceeEEcCCCc
Q 018900          307 AKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       307 ~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      ++.+.+++|+++.+..++..+
T Consensus       206 a~~l~~~~g~~v~~~~~~~~~  226 (285)
T TIGR03649       206 AEILSRVLGRKITHVKLTEEE  226 (285)
T ss_pred             HHHHHHHhCCceEEEeCCHHH
Confidence            999999999999998876653

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02996 fatty acyl-CoA reductase

Probab=99.94  E-value=6e-26  Score=222.12  Aligned_cols=239  Identities=13%  Similarity=0.120  Sum_probs=174.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccC-------CCC-CCC--------cccceecC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKM-------KKP-PFN--------RFNEIVSA  132 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~-------~~~-~~~--------~~~~l~~~  132 (349)
                      -.+++||||    |||||+|+++++.|+..+.   +|+++.|..+.....       ... .+.        .+.+....
T Consensus         9 ~~~k~VlvT----GaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996          9 LENKTILVT----GATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             hCCCeEEEe----CCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            457899999    9999999999999998653   689999976432211       000 000        01111125


Q ss_pred             CCeEEEcChh----------hHHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhC-CCcEEEEeccc
Q 018900          133 GGKTVWGDPA----------EVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSS-GVKQFLFISSA  188 (349)
Q Consensus       133 ~~~~~~~D~~----------~l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~-gv~~~i~~Ss~  188 (349)
                      +++++.||..          .+..++++  +|+|||+|+             .|+.++.+++++|++. ++++||++||.
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~--vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~  162 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWKE--IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA  162 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHhC--CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence            7888999842          24566655  599999998             3688999999999986 68999999999


Q ss_pred             cccCCCCC----CCCCCC---------------------------------------------------CCCCCCCChHH
Q 018900          189 GIYKPADE----PPHVEG---------------------------------------------------DVVKPDAGHVQ  213 (349)
Q Consensus       189 ~vy~~~~~----~~~~e~---------------------------------------------------~~~~~~~~k~~  213 (349)
                      .|||...+    .++.+.                                                   .+..+..+|..
T Consensus       163 ~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~  242 (491)
T PLN02996        163 YVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM  242 (491)
T ss_pred             EEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence            99986431    122110                                                   12234567888


Q ss_pred             HHHHHHhh--CCcEEEEecCceeeCCCCCC--ch------HHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          214 VEKYISEN--FSNWASFRPQYMIGSGNNKD--CE------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       214 ~ek~~~~~--~~~~~ilR~~~v~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      +|.++.++  +++++++||++|||++..+.  ++      ..++..+..|....++|++++.+|++|++|++++++.++.
T Consensus       243 aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~  322 (491)
T PLN02996        243 GEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMA  322 (491)
T ss_pred             HHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHH
Confidence            88888775  79999999999999876541  11      2234444556666788999999999999999999999988


Q ss_pred             CC--CccCCCEEEeeCC--CccCHHHHHHHHHHHhCC
Q 018900          284 NP--EAASSNIFNLVSD--RAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       284 ~~--~~~~~~~~~i~~~--~~~t~~el~~~~~~~~g~  316 (349)
                      ..  ....+++||++++  +++++.|+++.+.+.++.
T Consensus       323 ~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~  359 (491)
T PLN02996        323 AHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSK  359 (491)
T ss_pred             HhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence            63  2122479999998  899999999999998875

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=1.4e-25  Score=228.07  Aligned_cols=192  Identities=22%  Similarity=0.309  Sum_probs=153.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+||||++++++|+++|++|++++|......              ..+++++.+|   .+++.+++++ 
T Consensus         1 MkILVT----GATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--------------~~~v~~v~gDL~D~~~l~~al~~-   61 (854)
T PRK05865          1 MRIAVT----GASGVLGRGLTARLLSQGHEVVGIARHRPDSW--------------PSSADFIAADIRDATAVESAMTG-   61 (854)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--------------ccCceEEEeeCCCHHHHHHHHhC-
Confidence            579999    99999999999999999999999999753210              1134555555   6677777876 


Q ss_pred             CccEEEeCCCC-------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCc
Q 018900          152 TFDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (349)
Q Consensus       152 ~~d~Vi~~a~~-------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~  224 (349)
                       +|+|||+|+.       |+.++.+++++|++.++++||++||..                     |..+|+++.+++++
T Consensus        62 -vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------K~aaE~ll~~~gl~  119 (854)
T PRK05865         62 -ADVVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH---------------------QPRVEQMLADCGLE  119 (854)
T ss_pred             -CCEEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH---------------------HHHHHHHHHHcCCC
Confidence             5999999984       578899999999999999999999853                     78899999999999


Q ss_pred             EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHH
Q 018900          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       225 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~  304 (349)
                      ++++||+++|||+..     .++..+.. .++...|++++.++|+|++|++++++.+++.+... +++||+++++.+|++
T Consensus       120 ~vILRp~~VYGP~~~-----~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~-ggvyNIgsg~~~Si~  192 (854)
T PRK05865        120 WVAVRCALIFGRNVD-----NWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVID-SGPVNLAAPGELTFR  192 (854)
T ss_pred             EEEEEeceEeCCChH-----HHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcC-CCeEEEECCCcccHH
Confidence            999999999999732     23444332 22223345556679999999999999999765433 379999999999999


Q ss_pred             HHHHHHHHHh
Q 018900          305 GMAKLCAQAA  314 (349)
Q Consensus       305 el~~~~~~~~  314 (349)
                      |+++.+.+..
T Consensus       193 EIae~l~~~~  202 (854)
T PRK05865        193 RIAAALGRPM  202 (854)
T ss_pred             HHHHHHhhhh
Confidence            9999998753

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.8e-25  Score=227.79  Aligned_cols=236  Identities=19%  Similarity=0.261  Sum_probs=170.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHH--hCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh---------h
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELL--GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA---------E  143 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll--~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~---------~  143 (349)
                      |+||||    |||||||++|+++|+  ++|++|++++|+.... .+...    .......+++++.+|..         .
T Consensus         1 m~ILVT----GatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~-~~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~~~~   71 (657)
T PRK07201          1 MRYFVT----GGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS-RLEAL----AAYWGADRVVPLVGDLTEPGLGLSEAD   71 (657)
T ss_pred             CeEEEe----CCccHHHHHHHHHHHhcCCCCEEEEEECcchHH-HHHHH----HHhcCCCcEEEEecccCCccCCcCHHH
Confidence            489999    999999999999999  5799999999964221 10000    00001135667777732         3


Q ss_pred             HHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC------
Q 018900          144 VGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV------  204 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~------  204 (349)
                      ++.+ .  ++|+|||+|+             .|+.++.+++++|++.++++|||+||.++||.... ++.|+..      
T Consensus        72 ~~~l-~--~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~  147 (657)
T PRK07201         72 IAEL-G--DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGL  147 (657)
T ss_pred             HHHh-c--CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCC
Confidence            3443 3  4699999998             36889999999999999999999999999986543 3344321      


Q ss_pred             -CCCCCChHHHHHHHHh-hCCcEEEEecCceeeCCCCCC--------chHHHHHHHHh-CCCcccCCCCCcceeeeeHHH
Q 018900          205 -VKPDAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       205 -~~~~~~k~~~ek~~~~-~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D  273 (349)
                       ..+..+|+.+|+++.+ .+++++++||+++||+...+.        .+..++..+.. ...+++++.+....+++|++|
T Consensus       148 ~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdd  227 (657)
T PRK07201        148 PTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDY  227 (657)
T ss_pred             CCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHH
Confidence             2244678899998885 589999999999999865322        11112223211 112344555666789999999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCc---eeEEcC
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV---EIVHYD  324 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~---~~~~~~  324 (349)
                      +++++..+++.+... +++||+++++.+++.|+++.+.+.+|.+.   .+..+|
T Consensus       228 va~ai~~~~~~~~~~-g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p  280 (657)
T PRK07201        228 VADALDHLMHKDGRD-GQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLP  280 (657)
T ss_pred             HHHHHHHHhcCcCCC-CCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCC
Confidence            999999998865443 48999999999999999999999999876   444444

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.93  E-value=1e-24  Score=190.20  Aligned_cols=217  Identities=19%  Similarity=0.226  Sum_probs=162.9

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCccEE
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV  156 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d~V  156 (349)
                      |+||    ||||+||++|+..|.+.||+|++++|++.......           ...++    ..+.+++.... .+|+|
T Consensus         1 IliT----GgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-----------~~~v~----~~~~~~~~~~~-~~Dav   60 (297)
T COG1090           1 ILIT----GGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-----------HPNVT----LWEGLADALTL-GIDAV   60 (297)
T ss_pred             CeEe----ccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-----------Ccccc----ccchhhhcccC-CCCEE
Confidence            6899    99999999999999999999999999986554321           11222    22334443332 46999


Q ss_pred             EeCCCCC------------------hhhHHHHHHHHHh--CCCcEEEEeccccccCCCCCCCCCCCCCCCCCC-Ch--HH
Q 018900          157 LDNNGKN------------------LDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA-GH--VQ  213 (349)
Q Consensus       157 i~~a~~~------------------~~~~~~ll~~a~~--~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~-~k--~~  213 (349)
                      ||+||.+                  ++.|+.|+++..+  .+.+.||.-|.++.||+..+..++|+.+....- .+  +.
T Consensus        61 INLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~  140 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQD  140 (297)
T ss_pred             EECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHH
Confidence            9999953                  4678899998874  456678888889999999999999986655331 11  11


Q ss_pred             HHHHHH---hhCCcEEEEecCceeeCCCCCCchHHHHHH--HHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCcc
Q 018900          214 VEKYIS---ENFSNWASFRPQYMIGSGNNKDCEEWFFDR--IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (349)
Q Consensus       214 ~ek~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  288 (349)
                      -|+...   ..|.+++++|.|.|.++..+.  +..+...  .--|++   +|+|.|.++|||++|+++++..+++++...
T Consensus       141 WE~~a~~a~~~gtRvvllRtGvVLs~~GGa--L~~m~~~fk~glGG~---~GsGrQ~~SWIhieD~v~~I~fll~~~~ls  215 (297)
T COG1090         141 WEEEALQAQQLGTRVVLLRTGVVLSPDGGA--LGKMLPLFKLGLGGK---LGSGRQWFSWIHIEDLVNAILFLLENEQLS  215 (297)
T ss_pred             HHHHHhhhhhcCceEEEEEEEEEecCCCcc--hhhhcchhhhccCCc---cCCCCceeeeeeHHHHHHHHHHHHhCcCCC
Confidence            233222   238899999999999987553  3332221  122443   589999999999999999999999998875


Q ss_pred             CCCEEEeeCCCccCHHHHHHHHHHHhCCCcee
Q 018900          289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI  320 (349)
Q Consensus       289 ~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~  320 (349)
                        +.||++.|.+++.+|+.+.+.++++++...
T Consensus       216 --Gp~N~taP~PV~~~~F~~al~r~l~RP~~~  245 (297)
T COG1090         216 --GPFNLTAPNPVRNKEFAHALGRALHRPAIL  245 (297)
T ss_pred             --CcccccCCCcCcHHHHHHHHHHHhCCCccc
Confidence              499999999999999999999999987553

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.93  E-value=2.9e-24  Score=197.95  Aligned_cols=236  Identities=17%  Similarity=0.229  Sum_probs=181.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ++.+||||    ||+||+|++++++|++++  .+|++++..+.... +...    ........++++.+|..+...+.+.
T Consensus         3 ~~~~vlVt----GG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e----~~~~~~~~v~~~~~D~~~~~~i~~a   73 (361)
T KOG1430|consen    3 KKLSVLVT----GGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAE----LTGFRSGRVTVILGDLLDANSISNA   73 (361)
T ss_pred             cCCEEEEE----CCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchh----hhcccCCceeEEecchhhhhhhhhh
Confidence            46789999    999999999999999998  79999998763111 0000    0011345678888886555555544


Q ss_pred             CC-ccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC-CCCCCC------CCCC
Q 018900          151 VT-FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEG------DVVK  206 (349)
Q Consensus       151 ~~-~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~-~~~~e~------~~~~  206 (349)
                      .. + .|+|+++                +|+++|.+++++|++.|+++|||+||..|...... ..-+|+      ....
T Consensus        74 ~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~  152 (361)
T KOG1430|consen   74 FQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP  152 (361)
T ss_pred             ccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence            43 4 7777776                48999999999999999999999999998765443 222222      2234


Q ss_pred             CCCChHHHHHHHHhhC----CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHh
Q 018900          207 PDAGHVQVEKYISENF----SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (349)
Q Consensus       207 ~~~~k~~~ek~~~~~~----~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  282 (349)
                      +..+|..+|+++.+.+    +..++|||..||||++.. +++.++..+..++-.-..++++...++++++.++.+++.+.
T Consensus       153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~-~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~  231 (361)
T KOG1430|consen  153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR-LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA  231 (361)
T ss_pred             cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc-ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence            4578999999998874    779999999999999764 55666677777887777788878889999999999988776


Q ss_pred             c----CCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          283 E----NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       283 ~----~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      .    ..+..+|++|+|.+++++...++...+.+.+|...+
T Consensus       232 ~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  232 RALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             HHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence            4    334456799999999999999999999999998766

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.93  E-value=1.6e-24  Score=204.83  Aligned_cols=238  Identities=20%  Similarity=0.263  Sum_probs=166.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcc---cCCCCC-CCccc--ceecCCCeEEEcCh------
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSD---KMKKPP-FNRFN--EIVSAGGKTVWGDP------  141 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~---~~~~~~-~~~~~--~l~~~~~~~~~~D~------  141 (349)
                      +||||    |||||+|++++++|+++|  ++|++++|..+...   ++.... .....  .....+++++.+|.      
T Consensus         1 ~vlvt----GatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~g   76 (367)
T TIGR01746         1 TVLLT----GATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLG   76 (367)
T ss_pred             CEEEe----ccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCC
Confidence            58999    999999999999999999  67999999764221   100000 00000  00013677788883      


Q ss_pred             ---hhHHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC-
Q 018900          142 ---AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-  204 (349)
Q Consensus       142 ---~~l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~-  204 (349)
                         +.+..+..+  +|+|||+++             .|+.++.+++++|.+.++++|+++||.++|+.....+..|+.. 
T Consensus        77 l~~~~~~~~~~~--~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~  154 (367)
T TIGR01746        77 LSDAEWERLAEN--VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI  154 (367)
T ss_pred             cCHHHHHHHHhh--CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence               345555544  699999998             4678899999999999999999999999998643322223221 


Q ss_pred             --------CCCCCChHHHHHHHHhh---CCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          205 --------VKPDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       205 --------~~~~~~k~~~ek~~~~~---~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                              ..+..+|+.+|+++.+.   |++++++||+.++|+.....     ++..++......+.++  .......++
T Consensus       155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~  232 (367)
T TIGR01746       155 VTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTEDL  232 (367)
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCccccCc
Confidence                    12445788888887664   89999999999999743221     2333344333333222  212235679


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEE
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH  322 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~  322 (349)
                      +|++|++++++.++.++.. .++++||+++++.+++.|+++.+.+ +|.+++...
T Consensus       233 ~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~  286 (367)
T TIGR01746       233 TPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVS  286 (367)
T ss_pred             ccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCC
Confidence            9999999999999987654 2258999999999999999999999 888766433

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=6.4e-24  Score=195.81  Aligned_cols=204  Identities=17%  Similarity=0.162  Sum_probs=152.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +.||||||    ||+||||++|+++|+++|++|+...+..                          .|.+.+...+...+
T Consensus         8 ~~~kiLVt----G~tGfiG~~l~~~L~~~g~~V~~~~~~~--------------------------~~~~~v~~~l~~~~   57 (298)
T PLN02778          8 ATLKFLIY----GKTGWIGGLLGKLCQEQGIDFHYGSGRL--------------------------ENRASLEADIDAVK   57 (298)
T ss_pred             CCCeEEEE----CCCCHHHHHHHHHHHhCCCEEEEecCcc--------------------------CCHHHHHHHHHhcC
Confidence            45789999    9999999999999999999997543211                          13445555666567


Q ss_pred             ccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCC------CCCCCCCCCCCC
Q 018900          153 FDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD------EPPHVEGDVVKP  207 (349)
Q Consensus       153 ~d~Vi~~a~~-------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~------~~~~~e~~~~~~  207 (349)
                      +|+|||+|+.                   |+.++.+++++|++.|++ ++++||.++|+...      +.++.|++.+.+
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~  136 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNF  136 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCC
Confidence            8999999983                   356799999999999985 56677778886532      224666654432


Q ss_pred             -----CCChHHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHh
Q 018900          208 -----DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  282 (349)
Q Consensus       208 -----~~~k~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  282 (349)
                           ..+|..+|.++..+. +..++|+...+|++..  ....|+..+..+.++...+     .+++|++|++++++.++
T Consensus       137 ~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l  208 (298)
T PLN02778        137 TGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMA  208 (298)
T ss_pred             CCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHH
Confidence                 345667777776653 6788999887776432  2345778888777654433     36899999999999999


Q ss_pred             cCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       283 ~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                      +...  + ++||+++++.+++.|+++++++++|.+.
T Consensus       209 ~~~~--~-g~yNigs~~~iS~~el~~~i~~~~~~~~  241 (298)
T PLN02778        209 KRNL--T-GIYNFTNPGVVSHNEILEMYRDYIDPSF  241 (298)
T ss_pred             hCCC--C-CeEEeCCCCcccHHHHHHHHHHHhCCCc
Confidence            7643  2 5999999999999999999999999653

>PLN02583 cinnamoyl-CoA reductase

Probab=99.93  E-value=2.6e-24  Score=198.47  Aligned_cols=222  Identities=15%  Similarity=0.130  Sum_probs=156.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce--ecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~~~  147 (349)
                      .+++||||    ||+||||++++++|+++||+|++++|+.+......     .+..+  ...+++++.+|   .+++.++
T Consensus         5 ~~k~vlVT----GatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~~l~~~~~~~~~~~~Dl~d~~~~~~~   75 (297)
T PLN02583          5 SSKSVCVM----DASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEK-----EIRGLSCEEERLKVFDVDPLDYHSILDA   75 (297)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHH-----HHHhcccCCCceEEEEecCCCHHHHHHH
Confidence            45789999    99999999999999999999999999642211000     00011  01245666666   6677788


Q ss_pred             hcCCCccEEEeCCC--------------CChhhHHHHHHHHHhC-CCcEEEEecccccc--CCC---CCCCCCCCCCCC-
Q 018900          148 VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVK-  206 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~--------------~~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy--~~~---~~~~~~e~~~~~-  206 (349)
                      +.++  |.|+|.++              .|+.++.+++++|++. +++|||++||...+  +..   ...+++|+.+.. 
T Consensus        76 l~~~--d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~  153 (297)
T PLN02583         76 LKGC--SGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQ  153 (297)
T ss_pred             HcCC--CEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCH
Confidence            8775  99999764              2467899999999886 68999999998654  311   223566665431 


Q ss_pred             ---------CCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          207 ---------PDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       207 ---------~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                               +..+|..+|+++.+    .+++++++||+++|||+.....      ....+.. ..++.+  ..+|||++|
T Consensus       154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~~~~~~~-~~~~~~--~~~~v~V~D  224 (297)
T PLN02583        154 NFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN------PYLKGAA-QMYENG--VLVTVDVNF  224 (297)
T ss_pred             HHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch------hhhcCCc-ccCccc--CcceEEHHH
Confidence                     23457777877643    4899999999999999864321      1222322 222222  367999999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      +|++++.+++++...  +.|+++++....+.++++++.+.++.
T Consensus       225 va~a~~~al~~~~~~--~r~~~~~~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        225 LVDAHIRAFEDVSSY--GRYLCFNHIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             HHHHHHHHhcCcccC--CcEEEecCCCccHHHHHHHHHHhCCC
Confidence            999999999977653  47989887655678899999998874

>PRK12320 hypothetical protein; Provisional

Probab=99.91  E-value=5.3e-23  Score=205.47  Aligned_cols=189  Identities=17%  Similarity=0.242  Sum_probs=144.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh--hhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~l~~~~~~~~  152 (349)
                      ||||||    ||+||||++++++|+++||+|++++|.....              ...+++++.+|.  ..+.+++.+  
T Consensus         1 MkILVT----GAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------------~~~~ve~v~~Dl~d~~l~~al~~--   60 (699)
T PRK12320          1 MQILVT----DATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------------LDPRVDYVCASLRNPVLQELAGE--   60 (699)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------------ccCCceEEEccCCCHHHHHHhcC--
Confidence            489999    9999999999999999999999999865321              113566777773  235556655  


Q ss_pred             ccEEEeCCC--------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCc
Q 018900          153 FDVVLDNNG--------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (349)
Q Consensus       153 ~d~Vi~~a~--------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~  224 (349)
                      +|+|||+++        .|+.++.|++++|++.|+ ++||+||.  ||...              .....|.++.+++++
T Consensus        61 ~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~~~aE~ll~~~~~p  123 (699)
T PRK12320         61 ADAVIHLAPVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LYRQAETLVSTGWAP  123 (699)
T ss_pred             CCEEEEcCccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------cccHHHHHHHhcCCC
Confidence            599999998        356889999999999997 79999985  34211              012578888888899


Q ss_pred             EEEEecCceeeCCCCCC---chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCcc
Q 018900          225 WASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (349)
Q Consensus       225 ~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~  301 (349)
                      ++++|++++||++....   ++..++.....++          ...++|++|++++++.+++.+.  + ++||+++++.+
T Consensus       124 ~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~----------pI~vIyVdDvv~alv~al~~~~--~-GiyNIG~~~~~  190 (699)
T PRK12320        124 SLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR----------PIRVLHLDDLVRFLVLALNTDR--N-GVVDLATPDTT  190 (699)
T ss_pred             EEEEeCceecCCCCcccHhHHHHHHHHHHHcCC----------ceEEEEHHHHHHHHHHHHhCCC--C-CEEEEeCCCee
Confidence            99999999999965432   3333333333332          2446899999999999998643  2 59999999999


Q ss_pred             CHHHHHHHHHHH
Q 018900          302 TLDGMAKLCAQA  313 (349)
Q Consensus       302 t~~el~~~~~~~  313 (349)
                      |+.|+++++...
T Consensus       191 Si~el~~~i~~~  202 (699)
T PRK12320        191 NVVTAWRLLRSV  202 (699)
T ss_pred             EHHHHHHHHHHh
Confidence            999999998776

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=7.4e-23  Score=172.59  Aligned_cols=240  Identities=19%  Similarity=0.212  Sum_probs=187.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++|||||    ||+|-+|++|++.+.+.|.  +-.++.-+.+                      .+-.+.++.+++|...
T Consensus         1 s~kIlVt----Gg~GLVGsAi~~vv~~q~~~~e~wvf~~skd----------------------~DLt~~a~t~~lF~~e   54 (315)
T KOG1431|consen    1 SKKILVT----GGTGLVGSAIVKVVQEQGFDDENWVFIGSKD----------------------ADLTNLADTRALFESE   54 (315)
T ss_pred             CceEEEe----cCCchHHHHHHHHHHhcCCCCcceEEecccc----------------------ccccchHHHHHHHhcc
Confidence            5799999    9999999999999999887  3333332221                      1122678899999999


Q ss_pred             CccEEEeCCC-----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC----CCCCCCC
Q 018900          152 TFDVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAG  210 (349)
Q Consensus       152 ~~d~Vi~~a~-----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~~~~  210 (349)
                      ++..|||+|+                 .|+....|++..|.+.|+++++++.|.++|..-...|++|..    ++.+..-
T Consensus        55 kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~  134 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNF  134 (315)
T ss_pred             CCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCch
Confidence            9999999988                 356678899999999999999999999999998888999853    4555544


Q ss_pred             hHHHHH---------HHHhhCCcEEEEecCceeeCCCCCC-----chHHHHHHHH----hCC-CcccCCCCCcceeeeeH
Q 018900          211 HVQVEK---------YISENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIV----RKR-PVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       211 k~~~ek---------~~~~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~----~~~-~~~~~~~~~~~~~~i~v  271 (349)
                      -|...|         |..++|.+++.+-|+++|||.++..     +++.+++++-    .|. ++.++|+|...+.|||.
T Consensus       135 gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys  214 (315)
T KOG1431|consen  135 GYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYS  214 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhH
Confidence            455444         4456699999999999999988654     5666666543    243 78999999999999999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCC--ccCHHHHHHHHHHHhCCCceeEEcCCCccC-----CCcccc--CCCccc
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDR--AVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDAKKA--FPFRNM  341 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~--~~t~~el~~~~~~~~g~~~~~~~~~~~~~~-----~~~~k~--~g~~p~  341 (349)
                      +|+|++++.++..-+..  +..+++.++  .+|.+|+++++.+++|.+-++..-..+..+     .+..|.  ++|.|+
T Consensus       215 ~DLA~l~i~vlr~Y~~v--Epiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~sl~pd~~  291 (315)
T KOG1431|consen  215 DDLADLFIWVLREYEGV--EPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRSLLPDFK  291 (315)
T ss_pred             hHHHHHHHHHHHhhcCc--cceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHHhCCCcc
Confidence            99999999999987653  467888776  899999999999999998887765444332     223333  666654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=4.6e-22  Score=173.46  Aligned_cols=239  Identities=15%  Similarity=0.108  Sum_probs=185.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+|+.|||    |-||+-|.+|++.|+++||+|+++.|.........- .......+.+..+.+..+|   ...+..+++
T Consensus         1 ~~K~ALIT----GITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~   75 (345)
T COG1089           1 MGKVALIT----GITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILE   75 (345)
T ss_pred             CCceEEEe----cccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHH
Confidence            57889999    999999999999999999999999997533221100 0111112333446677777   677888889


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC--cEEEEeccccccCCCCCCCCCCCCCCCCCCCh
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv--~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k  211 (349)
                      ..+||.|+|+++.                +-.|+.+++++.+..|.  .||...||...||...+.|.+|..|+.|. ++
T Consensus        76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr-SP  154 (345)
T COG1089          76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SP  154 (345)
T ss_pred             hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC-CH
Confidence            9999999999982                45789999999999864  68999999999999999999999999875 89


Q ss_pred             HHHHHHHHh---------hCCcEEEEecCceeeCCCCCCchHHHHH----HHHhCCC-cccCCCCCcceeeeeHHHHHHH
Q 018900          212 VQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFD----RIVRKRP-VPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       212 ~~~ek~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                      |++.|+...         +|+-.+.=++.+--+|.++..++..-+-    ++..|.. ....|.-+..+||-|..|-+++
T Consensus       155 YAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~  234 (345)
T COG1089         155 YAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEA  234 (345)
T ss_pred             HHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHH
Confidence            999886543         4666665555566667776665444332    3333433 2456788889999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCcee
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI  320 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~  320 (349)
                      +..+++.+.+   ..|.+++|+..|+.|++++..+.+|.+.+.
T Consensus       235 mwlmLQq~~P---ddyViATg~t~sVrefv~~Af~~~g~~l~w  274 (345)
T COG1089         235 MWLMLQQEEP---DDYVIATGETHSVREFVELAFEMVGIDLEW  274 (345)
T ss_pred             HHHHHccCCC---CceEEecCceeeHHHHHHHHHHHcCceEEE
Confidence            9999999875   679999999999999999999999976553

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.90  E-value=1.3e-22  Score=193.06  Aligned_cols=223  Identities=21%  Similarity=0.257  Sum_probs=181.3

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      .-.+|+||||    ||+|-+|+.+++++++.+. +++.++|++.+...+......++.   ...+..+.||   .+.+..
T Consensus       247 ~~~gK~vLVT----GagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---~~~~~~~igdVrD~~~~~~  319 (588)
T COG1086         247 MLTGKTVLVT----GGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---ELKLRFYIGDVRDRDRVER  319 (588)
T ss_pred             HcCCCEEEEe----CCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---CcceEEEecccccHHHHHH
Confidence            3468999999    9999999999999999874 799999988555433322111111   2345566665   788999


Q ss_pred             hhcCCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 018900          147 VVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~  210 (349)
                      ++.+.++|+|+|.|+                .|+.|+.|++++|.++|+++||++||...-.+.+          ..+.+
T Consensus       320 ~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtN----------vmGaT  389 (588)
T COG1086         320 AMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTN----------VMGAT  389 (588)
T ss_pred             HHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCch----------HhhHH
Confidence            999999999999999                4899999999999999999999999954211111          12357


Q ss_pred             hHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          211 HVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       211 k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      |..+|+++..+       +-.++.+|.|||.|+..  .+++-|.+++.+|+|+++- +++-++-|+.+.|.++.++++..
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG--SViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~LVlqA~a  466 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG--SVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQLVLQAGA  466 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC--CCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHHHHHHHHh
Confidence            99999988765       25689999999999874  4889999999999998875 57778999999999999999998


Q ss_pred             CCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      ....  |++|-+-.|++++..|+++.|.+..|
T Consensus       467 ~~~g--GeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         467 IAKG--GEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             hcCC--CcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            8554  78999999999999999999999997

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=5.1e-24  Score=189.65  Aligned_cols=219  Identities=22%  Similarity=0.369  Sum_probs=163.4

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCCCc
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~~~  153 (349)
                      |+|+    ||||.+|+.+++.|++.+++|++++|+..+.         ....+...+++++.+|   ++++.++|++.  
T Consensus         1 I~V~----GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~---------~~~~l~~~g~~vv~~d~~~~~~l~~al~g~--   65 (233)
T PF05368_consen    1 ILVT----GATGNQGRSVVRALLSAGFSVRALVRDPSSD---------RAQQLQALGAEVVEADYDDPESLVAALKGV--   65 (233)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTGCEEEEESSSHHH---------HHHHHHHTTTEEEES-TT-HHHHHHHHTTC--
T ss_pred             CEEE----CCccHHHHHHHHHHHhCCCCcEEEEeccchh---------hhhhhhcccceEeecccCCHHHHHHHHcCC--
Confidence            7999    9999999999999999999999999987322         1234555688888887   68888899886  


Q ss_pred             cEEEeCCCCC----hhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC-CCCCCChHHHHHHHHhhCCcEEEE
Q 018900          154 DVVLDNNGKN----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-VKPDAGHVQVEKYISENFSNWASF  228 (349)
Q Consensus       154 d~Vi~~a~~~----~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~-~~~~~~k~~~ek~~~~~~~~~~il  228 (349)
                      |.|+.+.+..    .....+++++|+++|++|||+.|....+.....     ..+ ......|..+|+++++.+++|+++
T Consensus        66 d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~-----~~p~~~~~~~k~~ie~~l~~~~i~~t~i  140 (233)
T PF05368_consen   66 DAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG-----SEPEIPHFDQKAEIEEYLRESGIPYTII  140 (233)
T ss_dssp             SEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT-----STTHHHHHHHHHHHHHHHHHCTSEBEEE
T ss_pred             ceEEeecCcchhhhhhhhhhHHHhhhccccceEEEEEeccccccccc-----ccccchhhhhhhhhhhhhhhccccceec
Confidence            9999887743    778999999999999999997665444321110     010 000125788999999999999999


Q ss_pred             ecCceeeCCCCCCchHHHHHHH--HhC--CCcccCCCCCcceeee-eHHHHHHHHHHHhcCCCcc-CCCEEEeeCCCccC
Q 018900          229 RPQYMIGSGNNKDCEEWFFDRI--VRK--RPVPIPGSGMQFTNIA-HVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVT  302 (349)
Q Consensus       229 R~~~v~g~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~i-~v~Dva~~~~~~~~~~~~~-~~~~~~i~~~~~~t  302 (349)
                      |+|.++......      +...  ..+  ..+.++++++....++ +.+|++++++.++.++... +++.+.+++ +.+|
T Consensus       141 ~~g~f~e~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t  213 (233)
T PF05368_consen  141 RPGFFMENLLPP------FAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLT  213 (233)
T ss_dssp             EE-EEHHHHHTT------THHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEE
T ss_pred             cccchhhhhhhh------hcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCC
Confidence            999876532111      1111  111  1356777777767775 9999999999999998876 457777766 6799


Q ss_pred             HHHHHHHHHHHhCCCceeEE
Q 018900          303 LDGMAKLCAQAAGLPVEIVH  322 (349)
Q Consensus       303 ~~el~~~~~~~~g~~~~~~~  322 (349)
                      ++|+++.+.+.+|++++|+.
T Consensus       214 ~~eia~~~s~~~G~~v~y~~  233 (233)
T PF05368_consen  214 YNEIAAILSKVLGKKVKYVQ  233 (233)
T ss_dssp             HHHHHHHHHHHHTSEEEEEE
T ss_pred             HHHHHHHHHHHHCCccEEeC
Confidence            99999999999999998863

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.89  E-value=7.4e-23  Score=183.57  Aligned_cols=218  Identities=20%  Similarity=0.286  Sum_probs=156.1

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCe----EEEcC---hhhHHhhh
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK----TVWGD---PAEVGNVV  148 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~D---~~~l~~~~  148 (349)
                      ||||    ||+|.||+.|+++|++.+ .++++++|++.+.-.+......   ....++++    .+.+|   .+.+..++
T Consensus         1 VLVT----Ga~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~---~~~~~~v~~~~~~vigDvrd~~~l~~~~   73 (293)
T PF02719_consen    1 VLVT----GAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRS---RFPDPKVRFEIVPVIGDVRDKERLNRIF   73 (293)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHH---HC--TTCEEEEE--CTSCCHHHHHHHHT
T ss_pred             CEEE----ccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhh---cccccCcccccCceeecccCHHHHHHHH
Confidence            7999    999999999999999987 5799999987544322211100   01122333    33555   78889999


Q ss_pred             cCCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChH
Q 018900          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (349)
Q Consensus       149 ~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~  212 (349)
                      +..++|+|+|.|+                .|+.|++|++++|.+.++++||++||.....+..          ....+|+
T Consensus        74 ~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptn----------vmGatKr  143 (293)
T PF02719_consen   74 EEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTN----------VMGATKR  143 (293)
T ss_dssp             T--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--S----------HHHHHHH
T ss_pred             hhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCc----------HHHHHHH
Confidence            9888999999999                3789999999999999999999999954322211          0124677


Q ss_pred             HHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCC
Q 018900          213 QVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (349)
Q Consensus       213 ~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  285 (349)
                      .+|+++...       ...++++|.|+|.|+..  .+++.|.+++.+|+|+++. +.+.++-|+.+++.++.++.+....
T Consensus       144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G--SVip~F~~Qi~~g~PlTvT-~p~mtRffmti~EAv~Lvl~a~~~~  220 (293)
T PF02719_consen  144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG--SVIPLFKKQIKNGGPLTVT-DPDMTRFFMTIEEAVQLVLQAAALA  220 (293)
T ss_dssp             HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT--SCHHHHHHHHHTTSSEEEC-ETT-EEEEE-HHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhhCCCCCcEEEEEEecceecCCC--cHHHHHHHHHHcCCcceeC-CCCcEEEEecHHHHHHHHHHHHhhC
Confidence            788877765       24789999999999864  4899999999999999875 4567889999999999999999876


Q ss_pred             CccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       286 ~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      ..  |++|.+--|+++...||++.+.+..|.
T Consensus       221 ~~--geifvl~mg~~v~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  221 KG--GEIFVLDMGEPVKILDLAEAMIELSGL  249 (293)
T ss_dssp             -T--TEEEEE---TCEECCCHHHHHHHHTT-
T ss_pred             CC--CcEEEecCCCCcCHHHHHHHHHhhccc
Confidence            54  689999999999999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.89  E-value=8.3e-23  Score=174.90  Aligned_cols=175  Identities=30%  Similarity=0.477  Sum_probs=136.6

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCCCc
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~~~  153 (349)
                      |+|+    ||||++|++++++|+++|++|++++|++++..+             ..+++++.+|   ++++.+++.++  
T Consensus         1 I~V~----GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~~~--   61 (183)
T PF13460_consen    1 ILVF----GATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALKGA--   61 (183)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHTTS--
T ss_pred             eEEE----CCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhhhc--
Confidence            7999    999999999999999999999999999865432             4578888887   67788888876  


Q ss_pred             cEEEeCCC---CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC--CCCCCChHHHHHHHHhhCCcEEEE
Q 018900          154 DVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV--VKPDAGHVQVEKYISENFSNWASF  228 (349)
Q Consensus       154 d~Vi~~a~---~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~--~~~~~~k~~~ek~~~~~~~~~~il  228 (349)
                      |+||++++   .+...++++++++++.|++|||++|+.++|+........+...  ..+...+..+|+++++.+++|+++
T Consensus        62 d~vi~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~iv  141 (183)
T PF13460_consen   62 DAVIHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIV  141 (183)
T ss_dssp             SEEEECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEE
T ss_pred             chhhhhhhhhcccccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEE
Confidence            99999998   3577899999999999999999999999998654421111111  111245667888999899999999


Q ss_pred             ecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcC
Q 018900          229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (349)
Q Consensus       229 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  284 (349)
                      ||+++||+.....             .+ +...+....++|+.+|+|++++.++++
T Consensus       142 rp~~~~~~~~~~~-------------~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  142 RPGWIYGNPSRSY-------------RL-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EESEEEBTTSSSE-------------EE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ECcEeEeCCCcce-------------eE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999874321             11 001234456899999999999999875

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.89  E-value=6.4e-22  Score=178.15  Aligned_cols=213  Identities=15%  Similarity=0.198  Sum_probs=150.1

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh----hhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~l~~  146 (349)
                      ...+|+||||    ||+|++|+.++++|+++||+|++++|+.+.......       +  ..+++++.+|.    +.+.+
T Consensus        14 ~~~~~~ilIt----GasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------~--~~~~~~~~~Dl~d~~~~l~~   80 (251)
T PLN00141         14 NVKTKTVFVA----GATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-------Q--DPSLQIVRADVTEGSDKLVE   80 (251)
T ss_pred             cccCCeEEEE----CCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-------c--CCceEEEEeeCCCCHHHHHH
Confidence            3457899999    999999999999999999999999998754322110       0  12566777774    33444


Q ss_pred             hhcCCCccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC-CC----CC
Q 018900          147 VVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KP----DA  209 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~-~~----~~  209 (349)
                      .+. .++|+||++++.            |..++.++++++++.+++|||++||.++|+...+.+..+.+.. .+    ..
T Consensus        81 ~~~-~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~  159 (251)
T PLN00141         81 AIG-DDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLV  159 (251)
T ss_pred             Hhh-cCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHH
Confidence            441 136999999874            2347899999999999999999999999986543333332211 10    12


Q ss_pred             ChHHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccC
Q 018900          210 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  289 (349)
Q Consensus       210 ~k~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  289 (349)
                      .|..+|+++++.+++++++||+++++......              +.+.........+|+.+|+|++++.++.++...+
T Consensus       160 ~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~--------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~  225 (251)
T PLN00141        160 AKLQAEKYIRKSGINYTIVRPGGLTNDPPTGN--------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSY  225 (251)
T ss_pred             HHHHHHHHHHhcCCcEEEEECCCccCCCCCce--------------EEECCCCccccCcccHHHHHHHHHHHhcChhhcC
Confidence            36677888888999999999999997643211              1111111112357999999999999999877544


Q ss_pred             CCEEEeeC---CCccCHHHHHHHHHH
Q 018900          290 SNIFNLVS---DRAVTLDGMAKLCAQ  312 (349)
Q Consensus       290 ~~~~~i~~---~~~~t~~el~~~~~~  312 (349)
                       +++.+.+   +...++.+|++.+++
T Consensus       226 -~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        226 -KVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             -cEEEEecCCCCCchhHHHHHHHhhc
Confidence             7787775   335788888887764

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.86  E-value=4.5e-21  Score=189.62  Aligned_cols=235  Identities=13%  Similarity=0.139  Sum_probs=160.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcc-------cCCC-CCCCc--------ccceecCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSD-------KMKK-PPFNR--------FNEIVSAG  133 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~-------~~~~-~~~~~--------~~~l~~~~  133 (349)
                      .+++||||    |||||+|++|+++|++.+.   +|+++.|..+...       ++.. ..+.+        +.......
T Consensus       118 ~~k~VlVT----GaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K  193 (605)
T PLN02503        118 RGKNFLIT----GATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK  193 (605)
T ss_pred             cCCEEEEc----CCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence            67899999    9999999999999998764   6899999754321       1110 00111        11112345


Q ss_pred             CeEEEcCh---------hhHHhhhcCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCC-CcEEEEeccccc
Q 018900          134 GKTVWGDP---------AEVGNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSG-VKQFLFISSAGI  190 (349)
Q Consensus       134 ~~~~~~D~---------~~l~~~~~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~v  190 (349)
                      +..+.+|.         ++++.+.++  +|+|||+|+.             |+.++.+++++|++.+ .++|||+||..|
T Consensus       194 i~~v~GDl~d~~LGLs~~~~~~L~~~--vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV  271 (605)
T PLN02503        194 LVPVVGNVCESNLGLEPDLADEIAKE--VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV  271 (605)
T ss_pred             EEEEEeeCCCcccCCCHHHHHHHHhc--CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence            77788883         234444444  6999999982             6789999999998874 789999999999


Q ss_pred             cCCCCCCCCCCCCC---------------------------------------------------------------CCC
Q 018900          191 YKPADEPPHVEGDV---------------------------------------------------------------VKP  207 (349)
Q Consensus       191 y~~~~~~~~~e~~~---------------------------------------------------------------~~~  207 (349)
                      ||...+ .+.|...                                                               ..|
T Consensus       272 yG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtY  350 (605)
T PLN02503        272 NGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTY  350 (605)
T ss_pred             ecCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChH
Confidence            987532 1112111                                                               111


Q ss_pred             CCChHHHHHHHHhh--CCcEEEEecCce----------eeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          208 DAGHVQVEKYISEN--FSNWASFRPQYM----------IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       208 ~~~k~~~ek~~~~~--~~~~~ilR~~~v----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ..+|..+|.++.++  +++++|+||+.|          |+++...  ....+..+.+|.--.++++++...|+|++|.++
T Consensus       351 t~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~--~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vv  428 (605)
T PLN02503        351 VFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRM--MDPIVLYYGKGQLTGFLADPNGVLDVVPADMVV  428 (605)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccc--cchhhhheeccceeEEEeCCCeeEeEEeecHHH
Confidence            23466677777765  799999999999          4443211  111121222333334778889999999999999


Q ss_pred             HHHHHHhcC-CC--ccCCCEEEeeCC--CccCHHHHHHHHHHHhCC
Q 018900          276 SMLTLAVEN-PE--AASSNIFNLVSD--RAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       276 ~~~~~~~~~-~~--~~~~~~~~i~~~--~~~t~~el~~~~~~~~g~  316 (349)
                      ++++.++.. ..  ...+++||++++  +++++.|+.+.+.+.+..
T Consensus       429 na~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        429 NATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            999999532 11  112589999988  899999999999987653

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.86  E-value=6.4e-21  Score=166.19  Aligned_cols=234  Identities=18%  Similarity=0.253  Sum_probs=179.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++..+-|.    |||||+|++++.+|.+.|-+|++-.|..+.. ..++...  .+.++.  -..+..-|++++.++++..
T Consensus        60 sGiVaTVF----GAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG--dLGQvl--~~~fd~~DedSIr~vvk~s  131 (391)
T KOG2865|consen   60 SGIVATVF----GATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG--DLGQVL--FMKFDLRDEDSIRAVVKHS  131 (391)
T ss_pred             cceEEEEe----cccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc--ccccee--eeccCCCCHHHHHHHHHhC
Confidence            45678899    9999999999999999999999999976432 2221111  111111  1223334789999999887


Q ss_pred             CccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 018900          152 TFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS  219 (349)
Q Consensus       152 ~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~  219 (349)
                        .+||++.|.            |+.+.+.+.+.|+++|+.|||++|+.+..       +  ..+....++|+..|+.++
T Consensus       132 --NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------v--~s~Sr~LrsK~~gE~aVr  200 (391)
T KOG2865|consen  132 --NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------V--KSPSRMLRSKAAGEEAVR  200 (391)
T ss_pred             --cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------c--cChHHHHHhhhhhHHHHH
Confidence              999999993            56789999999999999999999987621       1  111122357999999999


Q ss_pred             hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc-eeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          220 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF-TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       220 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      +...+.+|+||..|||..+.  +++.+.....+-+.+++++.|..+ -.++++-|+|.+|+.++.+++.. |++|..+++
T Consensus       201 dafPeAtIirPa~iyG~eDr--fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~-Gktye~vGP  277 (391)
T KOG2865|consen  201 DAFPEATIIRPADIYGTEDR--FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSM-GKTYEFVGP  277 (391)
T ss_pred             hhCCcceeechhhhcccchh--HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcccc-CceeeecCC
Confidence            99999999999999998654  566666666667778888877544 46999999999999999999765 499999999


Q ss_pred             CccCHHHHHHHHHHHhCCCceeEEcCCCcc
Q 018900          299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKAA  328 (349)
Q Consensus       299 ~~~t~~el~~~~~~~~g~~~~~~~~~~~~~  328 (349)
                      ..+++.||++.+-+.+-....+...|.+.+
T Consensus       278 ~~yql~eLvd~my~~~~~~~ry~r~~mP~f  307 (391)
T KOG2865|consen  278 DRYQLSELVDIMYDMAREWPRYVRLPMPIF  307 (391)
T ss_pred             chhhHHHHHHHHHHHHhhccccccCCcHHH
Confidence            999999999999998876556665555433

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.86  E-value=9.5e-21  Score=184.26  Aligned_cols=224  Identities=15%  Similarity=0.188  Sum_probs=148.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC-cc---cceecCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-RF---NEIVSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~---~~l~~~~~~~~~~D---~~~l~  145 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....+...... ..   ......+++++.+|   .+++.
T Consensus        79 ~gKvVLVT----GATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         79 DEDLAFVA----GATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            56789999    9999999999999999999999999987654322110000 00   00001235667776   56666


Q ss_pred             hhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCCh
Q 018900          146 NVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k  211 (349)
                      +++.+  +|+|||++|.              |+.++.+++++|++.|++|||++||.+++........ ..........|
T Consensus       155 ~aLgg--iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~-~~sk~~~~~~K  231 (576)
T PLN03209        155 PALGN--ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAI-LNLFWGVLCWK  231 (576)
T ss_pred             HHhcC--CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccc-hhhHHHHHHHH
Confidence            67766  4999999883              3467999999999999999999999876421110000 00000011246


Q ss_pred             HHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCC
Q 018900          212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  291 (349)
Q Consensus       212 ~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~  291 (349)
                      ..+|+++.+.|++|++||||+++++.....          ....+.....+......+..+|||++++.++.++....++
T Consensus       232 raaE~~L~~sGIrvTIVRPG~L~tp~d~~~----------~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~k  301 (576)
T PLN03209        232 RKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCK  301 (576)
T ss_pred             HHHHHHHHHcCCCEEEEECCeecCCccccc----------cccceeeccccccCCCccCHHHHHHHHHHHHcCchhccce
Confidence            778889999999999999999987744321          0011111111111123588999999999999988755558


Q ss_pred             EEEeeCCCccCHHHHHHHHHHH
Q 018900          292 IFNLVSDRAVTLDGMAKLCAQA  313 (349)
Q Consensus       292 ~~~i~~~~~~t~~el~~~~~~~  313 (349)
                      +|.+.++.......+.+++.++
T Consensus       302 vvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        302 VVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             EEEEEeCCCCCCCCHHHHHHhc
Confidence            9999987644445555555543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.85  E-value=3.6e-20  Score=157.37  Aligned_cols=263  Identities=13%  Similarity=0.085  Sum_probs=192.2

Q ss_pred             cccccccccceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhh
Q 018900           65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (349)
Q Consensus        65 ~~~~~~~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~  143 (349)
                      +.....+....+||||    |+-|.+|..+++.|..+ |-+-+++..-.+..+......         +-+-.+..|...
T Consensus        35 FH~~s~~~~~PrvLIT----G~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~G---------PyIy~DILD~K~  101 (366)
T KOG2774|consen   35 FHTISQTQKAPRVLIT----GSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVG---------PYIYLDILDQKS  101 (366)
T ss_pred             cccccccCCCCeEEEe----cchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccC---------Cchhhhhhcccc
Confidence            4444445567799999    99999999999999877 777666654333332222111         111222336888


Q ss_pred             HHhhhcCCCccEEEeCCC---------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC
Q 018900          144 VGNVVGGVTFDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~---------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~  208 (349)
                      ++++.-+.++|+++|+.+               +|+.|+.|+++.|++.+. +++..|++|.||+..+..-+++.....+
T Consensus       102 L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRP  180 (366)
T KOG2774|consen  102 LEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRP  180 (366)
T ss_pred             HHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecC
Confidence            999999989999999765               589999999999999987 6777999999999876655555555555


Q ss_pred             CChHHHHHHHHhh---------CCcEEEEecCceeeCCCC----CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          209 AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       209 ~~k~~~ek~~~~~---------~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ++.|+++|+.+|.         |+++..+|.+.++.....    .++....+..+.+.++..++..++.+..+++.+|+-
T Consensus       181 RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~  260 (366)
T KOG2774|consen  181 RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCM  260 (366)
T ss_pred             ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHH
Confidence            6677777766552         899999998888764222    224444566777777788888899999999999999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhC-CCceeEE---------cCCCccCCCccccCCCccce
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAG-LPVEIVH---------YDPKAAGIDAKKAFPFRNMV  342 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g-~~~~~~~---------~~~~~~~~~~~k~~g~~p~~  342 (349)
                      +.++..+..+.. ...++||+.+- .+|.+|+++.+.+++. .++.+..         +|....+.++.++|-|+..+
T Consensus       261 ~~~~~~~~a~~~~lkrr~ynvt~~-sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~  337 (366)
T KOG2774|consen  261 ASVIQLLAADSQSLKRRTYNVTGF-SFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSL  337 (366)
T ss_pred             HHHHHHHhCCHHHhhhheeeecee-ccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhh
Confidence            999999988765 24479999975 5999999999999874 4555543         34445556666677776554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.84  E-value=9.1e-20  Score=166.45  Aligned_cols=233  Identities=18%  Similarity=0.244  Sum_probs=159.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCc---ccCCCC--CCCcccceecCCCeEEEcC--------
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENS---DKMKKP--PFNRFNEIVSAGGKTVWGD--------  140 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~---~~~~~~--~~~~~~~l~~~~~~~~~~D--------  140 (349)
                      ++||+|    |||||+|.+++.+|+.+-. +|++++|..+.-   .++.+.  ....|+++..++++++.||        
T Consensus         1 ~~vlLT----GATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL   76 (382)
T COG3320           1 RNVLLT----GATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL   76 (382)
T ss_pred             CeEEEe----cCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence            479999    9999999999999998854 999999976411   111111  2334667888899999998        


Q ss_pred             -hhhHHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC---
Q 018900          141 -PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD---  203 (349)
Q Consensus       141 -~~~l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~---  203 (349)
                       ..++..+.+..  |.|||+++             .|+.|+..+++.|...+.|.|+|+||++|+.........++.   
T Consensus        77 ~~~~~~~La~~v--D~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          77 SERTWQELAENV--DLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             CHHHHHHHhhhc--ceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence             34566666554  99999998             589999999999998888999999999987653322221111   


Q ss_pred             ----------CCCCCCChHHHHHHHHhh---CCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcc
Q 018900          204 ----------VVKPDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       204 ----------~~~~~~~k~~~ek~~~~~---~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                                ...+.++|+.+|+++++.   |++++|+|||+|.|....+     +++..|+....+-+.++-.   ...
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~---~~~  231 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS---EYS  231 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc---ccc
Confidence                      134558999999999876   8999999999999976632     2555666666654444311   122


Q ss_pred             eeeeeHHHHHHH-----------HHHHhcCCCccCCCEEE-eeCCCccCHHHHHHHHHH--HhCCC
Q 018900          266 TNIAHVRDLSSM-----------LTLAVENPEAASSNIFN-LVSDRAVTLDGMAKLCAQ--AAGLP  317 (349)
Q Consensus       266 ~~~i~v~Dva~~-----------~~~~~~~~~~~~~~~~~-i~~~~~~t~~el~~~~~~--~~g~~  317 (349)
                      .+.+.+++++++           +..+...+...- ..|. ..-|..+...++.+.+.+  ..+.+
T Consensus       232 ~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f-~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~  296 (382)
T COG3320         232 LDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRF-NQLHMLTHPDEIGLDEYVDWLISLDIAGYP  296 (382)
T ss_pred             hhhCccceeeEEeehhhhhHHHHHHHhccCccchh-hheecccCCCccchhHHHHhHhhhhccCCc
Confidence            333343333333           333332222211 2333 223778999999999988  55554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=9.9e-20  Score=185.74  Aligned_cols=200  Identities=19%  Similarity=0.197  Sum_probs=149.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEE-EEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~-~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .+.||||||    ||+||||++|+++|.++|++|. ...+                           ..|.+.+...+..
T Consensus       378 ~~~mkiLVt----Ga~G~iG~~l~~~L~~~g~~v~~~~~~---------------------------l~d~~~v~~~i~~  426 (668)
T PLN02260        378 KPSLKFLIY----GRTGWIGGLLGKLCEKQGIAYEYGKGR---------------------------LEDRSSLLADIRN  426 (668)
T ss_pred             CCCceEEEE----CCCchHHHHHHHHHHhCCCeEEeeccc---------------------------cccHHHHHHHHHh
Confidence            356799999    9999999999999999999984 2111                           1166777778887


Q ss_pred             CCccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCC------CCCCCCCCCCC
Q 018900          151 VTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------DEPPHVEGDVV  205 (349)
Q Consensus       151 ~~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~------~~~~~~e~~~~  205 (349)
                      .++|+|||+|+.                   |+.++.+|+++|++.|+ ++|++||..||+..      .+.|+.|++.+
T Consensus       427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCC
Confidence            789999999972                   45689999999999998 57788888888642      23477777644


Q ss_pred             CC-----CCChHHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCC-cccCCCCCcceeeeeHHHHHHHHH
Q 018900          206 KP-----DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       206 ~~-----~~~k~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                      .+     ..+|...|++++++ .++.++|+.++|+.+...  ...|+..+++... +.++      .+..+++|++.+++
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~  576 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISI  576 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHH
Confidence            33     35678888888776 477888999999754221  1245666665444 2332      23577888998888


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      .+++...   +++||+++++.+++.|+++.+.+.++
T Consensus       577 ~l~~~~~---~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        577 EMAKRNL---RGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             HHHHhCC---CceEEecCCCcCcHHHHHHHHHHhcC
Confidence            8887422   37999999999999999999999884

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.83  E-value=1.3e-19  Score=198.91  Aligned_cols=243  Identities=17%  Similarity=0.231  Sum_probs=166.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC----CeEEEEEcCCCCcccCCCCC-----CCcccceecCCCeEEEcCh--
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPP-----FNRFNEIVSAGGKTVWGDP--  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g----~~V~~l~R~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~D~--  141 (349)
                      ..++||||    ||+||+|++++++|++++    ++|+++.|............     ...+......+++++.+|.  
T Consensus       970 ~~~~VlvT----GatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~ 1045 (1389)
T TIGR03443       970 TPITVFLT----GATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSK 1045 (1389)
T ss_pred             CCceEEEe----CCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCC
Confidence            35789999    999999999999999887    79999999753322110000     0000111123567777773  


Q ss_pred             -------hhHHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCC------
Q 018900          142 -------AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD------  195 (349)
Q Consensus       142 -------~~l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~------  195 (349)
                             +.+..+..+  +|+|||+|+             .|+.++.+++++|++.++++|+|+||.++|+...      
T Consensus      1046 ~~lgl~~~~~~~l~~~--~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443      1046 EKFGLSDEKWSDLTNE--VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSD 1123 (1389)
T ss_pred             ccCCcCHHHHHHHHhc--CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhh
Confidence                   345555544  599999998             3688999999999999999999999999986421      


Q ss_pred             ------CCCCCCCCC---------CCCCCChHHHHHHHHhh---CCcEEEEecCceeeCCCCCC-chHHHHHHHHhCC-C
Q 018900          196 ------EPPHVEGDV---------VKPDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKR-P  255 (349)
Q Consensus       196 ------~~~~~e~~~---------~~~~~~k~~~ek~~~~~---~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~-~  255 (349)
                            ...+.|+..         ..|..+|+.+|+++.++   |++++++||+.|||+...+. ....++..+..+. .
T Consensus      1124 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443      1124 ELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred             hhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence                  112233221         12446788888887654   89999999999999865432 2222333333211 1


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEE
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH  322 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~  322 (349)
                      ...+.+....++|++++|++++++.++.++.. ..+.+||++++..+++.++++.+.+. |.+.+...
T Consensus      1204 ~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~ 1270 (1389)
T TIGR03443      1204 LGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVD 1270 (1389)
T ss_pred             hCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccC
Confidence            12223445568999999999999999887643 23369999999889999999999764 66655443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.83  E-value=1e-20  Score=170.13  Aligned_cols=193  Identities=17%  Similarity=0.238  Sum_probs=112.9

Q ss_pred             EEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCc---ccCCCCCC--Ccccce---ecCCCeEEEcCh-------
Q 018900           79 IVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENS---DKMKKPPF--NRFNEI---VSAGGKTVWGDP-------  141 (349)
Q Consensus        79 Vt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~---~~~~~~~~--~~~~~l---~~~~~~~~~~D~-------  141 (349)
                      ||    |||||+|++|+++|++++.  +|+++.|..+..   +.+.....  .-+...   ...+++++.||.       
T Consensus         1 lT----GaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LT----GATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-----TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG-
T ss_pred             Cc----CCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCC
Confidence            68    9999999999999999987  999999986431   11111100  011111   257899999992       


Q ss_pred             --hhHHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCC-----
Q 018900          142 --AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE-----  201 (349)
Q Consensus       142 --~~l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e-----  201 (349)
                        +++..+.++  +|+|||+|+             .|+.+++++++.|.+.+.++|+|+||..+.+...+ ...|     
T Consensus        77 ~~~~~~~L~~~--v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~  153 (249)
T PF07993_consen   77 SDEDYQELAEE--VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPE  153 (249)
T ss_dssp             -HHHHHHHHHH----EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HH
T ss_pred             ChHHhhccccc--cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-ccccccccc
Confidence              456666555  599999999             37899999999999887779999999555554332 1111     


Q ss_pred             ---------CCCCCCCCChHHHHHHHHhh----CCcEEEEecCceeeCCCC-----CCchHHHHHHHHh-CCCcccCCCC
Q 018900          202 ---------GDVVKPDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVR-KRPVPIPGSG  262 (349)
Q Consensus       202 ---------~~~~~~~~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~  262 (349)
                               .....|..+|+.+|+++.+.    |++++|+||+.|+|....     .+....++..... +.....+++.
T Consensus       154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~  233 (249)
T PF07993_consen  154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDP  233 (249)
T ss_dssp             H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB--
T ss_pred             ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCC
Confidence                     11122346789999988765    899999999999994322     2224444444444 4433466666


Q ss_pred             CcceeeeeHHHHHHHH
Q 018900          263 MQFTNIAHVRDLSSML  278 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~  278 (349)
                      +...++++||.+|++|
T Consensus       234 ~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  234 DARLDLVPVDYVARAI  249 (249)
T ss_dssp             -TT--EEEHHHHHHHH
T ss_pred             CceEeEECHHHHHhhC
Confidence            6679999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.81  E-value=1.9e-18  Score=161.20  Aligned_cols=226  Identities=18%  Similarity=0.213  Sum_probs=145.2

Q ss_pred             cccccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC----hhhH
Q 018900           69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEV  144 (349)
Q Consensus        69 ~~~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~l  144 (349)
                      ....++++|||+    ||||.+|+.+++.|+++|+.|++++|+.+...++..      ....+.+.+.+..+    .+.+
T Consensus        74 ~~~~~~~~VlVv----GatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~------~~~~d~~~~~v~~~~~~~~d~~  143 (411)
T KOG1203|consen   74 NNSKKPTTVLVV----GATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG------VFFVDLGLQNVEADVVTAIDIL  143 (411)
T ss_pred             CCCCCCCeEEEe----cCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc------ccccccccceeeeccccccchh
Confidence            334567899999    999999999999999999999999999877765433      12223344444443    2333


Q ss_pred             HhhhcCCC--ccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCC
Q 018900          145 GNVVGGVT--FDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (349)
Q Consensus       145 ~~~~~~~~--~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~  209 (349)
                      ..+.....  ..+++-+++             +++++++|+++||+.+|++||+++|+++.-......+.... ......
T Consensus       144 ~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~-~~~~~~  222 (411)
T KOG1203|consen  144 KKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLL-NGLVLK  222 (411)
T ss_pred             hhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhh-hhhhhH
Confidence            33333331  345555544             47899999999999999999999998775433222221111 112224


Q ss_pred             ChHHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccC
Q 018900          210 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  289 (349)
Q Consensus       210 ~k~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  289 (349)
                      +|+.+|+++++.|++++|||++...-......      .....+.+....+++.  -..+...|+|+.++.++.++...+
T Consensus       223 ~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  223 AKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQR------EVVVDDEKELLTVDGG--AYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             HHHhHHHHHHhcCCCcEEEeccccccCCCCcc------eecccCcccccccccc--ceeeehhhHHHHHHHHHhhhhhcc
Confidence            68899999999999999999998765433221      1111112212222221  136888999999999999988765


Q ss_pred             CCEEEeeCCCccCHHHHHHHHHHHh
Q 018900          290 SNIFNLVSDRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       290 ~~~~~i~~~~~~t~~el~~~~~~~~  314 (349)
                      .++.+++.. .-......+.+.+..
T Consensus       295 ~k~~~~v~~-~~gpg~~~~~l~~~~  318 (411)
T KOG1203|consen  295 KKVVELVLK-PEGPGRPYKVLLELF  318 (411)
T ss_pred             ceeEEeecC-CCCCCccHHHHHhhc
Confidence            456666543 233333444444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4e-18  Score=155.46  Aligned_cols=214  Identities=19%  Similarity=0.168  Sum_probs=142.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |.++||||    ||+|+||++++++|+++|++|++++|+.+....+..        ....++.++.+|   .+++.+++.
T Consensus         1 m~k~vlVt----Gasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~   68 (276)
T PRK06482          1 MSKTWFIT----GASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA--------RYGDRLWVLQLDVTDSAAVRAVVD   68 (276)
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hccCceEEEEccCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998654332211        111245555565   555555543


Q ss_pred             C-----CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +     .++|+|||++|.                    |+.++.++++++    ++.+.++||++||.+.....   +  
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~--  143 (276)
T PRK06482         69 RAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY---P--  143 (276)
T ss_pred             HHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC---C--
Confidence            2     247999999983                    566777778775    66677899999996543211   1  


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCce---eeCCCCCC--------chHHHHHHHHhCCCcccCCCC
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYM---IGSGNNKD--------CEEWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v---~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  262 (349)
                        ....+..+|..+|.+++.       ++++++++|||.+   ||++....        .....+.+....+++.+    
T Consensus       144 --~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  217 (276)
T PRK06482        144 --GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI----  217 (276)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC----
Confidence              112234467766655432       4899999999988   55443211        11112223333333222    


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                           +.+++|++++++.++..+..  +..||+++++..+..|+++.+.+.++.
T Consensus       218 -----~~d~~~~~~a~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~  264 (276)
T PRK06482        218 -----PGDPQKMVQAMIASADQTPA--PRRLTLGSDAYASIRAALSERLAALEA  264 (276)
T ss_pred             -----CCCHHHHHHHHHHHHcCCCC--CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence                 24789999999999987654  367999999888888888888777653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=6.4e-17  Score=146.96  Aligned_cols=214  Identities=24%  Similarity=0.276  Sum_probs=161.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      ++||||    ||||++|++++++|+++|++|++++|+.+....+.            .++++..+|   ...+...+++.
T Consensus         1 ~~ilV~----GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~G~   64 (275)
T COG0702           1 MKILVT----GATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAKGV   64 (275)
T ss_pred             CeEEEE----ecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhccc
Confidence            579999    99999999999999999999999999987665322            467777777   66677777775


Q ss_pred             CccEEEeCCCCC-------hhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhC
Q 018900          152 TFDVVLDNNGKN-------LDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF  222 (349)
Q Consensus       152 ~~d~Vi~~a~~~-------~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~  222 (349)
                        |.++++.+..       .....++++.++..+  +++++++|..+....         .+..+...|..+|+.+.+.|
T Consensus        65 --~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~---------~~~~~~~~~~~~e~~l~~sg  133 (275)
T COG0702          65 --DGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA---------SPSALARAKAAVEAALRSSG  133 (275)
T ss_pred             --cEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC---------CccHHHHHHHHHHHHHHhcC
Confidence              8888776622       334556677777655  789999997664321         11222347899999999999


Q ss_pred             CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                      ++++++|+..+|.......    .......+.++...+.+  ...++..+|++.++..++..+... +++|.+++++..+
T Consensus       134 ~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~-~~~~~l~g~~~~~  206 (275)
T COG0702         134 IPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALT  206 (275)
T ss_pred             CCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCccc-CcEEEccCCceec
Confidence            9999999777766543321    12233344444444444  678999999999999999988744 4999999999999


Q ss_pred             HHHHHHHHHHHhCCCceeEE
Q 018900          303 LDGMAKLCAQAAGLPVEIVH  322 (349)
Q Consensus       303 ~~el~~~~~~~~g~~~~~~~  322 (349)
                      ..++.+.+.+..|++..+..
T Consensus       207 ~~~~~~~l~~~~gr~~~~~~  226 (275)
T COG0702         207 LAELASGLDYTIGRPVGLIP  226 (275)
T ss_pred             HHHHHHHHHHHhCCcceeeC
Confidence            99999999999999988844

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.74  E-value=4e-16  Score=133.72  Aligned_cols=233  Identities=15%  Similarity=0.147  Sum_probs=168.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCC-CCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-KPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .|..|||    |-||.-|++|++.|+.+||+|.++.|...+-.-.. ......-.........+-.+|   ...|.+++.
T Consensus        28 rkvALIT----GItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~  103 (376)
T KOG1372|consen   28 RKVALIT----GITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS  103 (376)
T ss_pred             ceEEEEe----cccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence            4568999    99999999999999999999999998764322100 000000001112234555565   677889999


Q ss_pred             CCCccEEEeCCC----------------CChhhHHHHHHHHHhCCC---cEEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 018900          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (349)
Q Consensus       150 ~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv---~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~  210 (349)
                      ..+++-|+|+|+                ++..|+..++++.+..+.   -||-..||...||...+.|..|..|+.|. +
T Consensus       104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPR-S  182 (376)
T KOG1372|consen  104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPR-S  182 (376)
T ss_pred             ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCC-C
Confidence            999999999988                356789999999998873   38999999999999888999999988764 8


Q ss_pred             hHHHHHHHH---------hhCCcEEEEecCcee---eCCCCCCchHHHHHHHHh----C-CCcccCCCCCcceeeeeHHH
Q 018900          211 HVQVEKYIS---------ENFSNWASFRPQYMI---GSGNNKDCEEWFFDRIVR----K-RPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       211 k~~~ek~~~---------~~~~~~~ilR~~~v~---g~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v~D  273 (349)
                      .|++.|+..         .+++=   ..-|.+|   .|+++.+++..-+-+.+.    | ......|.-+..+||-|..|
T Consensus       183 PYa~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~d  259 (376)
T KOG1372|consen  183 PYAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGD  259 (376)
T ss_pred             hhHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHH
Confidence            888888543         22221   1123333   355555555443333322    2 22234577777899999999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                      -++++..+++++.+   .-|.+++++..++.|+++.-....|..
T Consensus       260 YVEAMW~mLQ~d~P---dDfViATge~hsVrEF~~~aF~~ig~~  300 (376)
T KOG1372|consen  260 YVEAMWLMLQQDSP---DDFVIATGEQHSVREFCNLAFAEIGEV  300 (376)
T ss_pred             HHHHHHHHHhcCCC---CceEEecCCcccHHHHHHHHHHhhCcE
Confidence            99999999999887   459999999999999999999988843

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=5e-17  Score=145.23  Aligned_cols=203  Identities=15%  Similarity=0.143  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-CCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|++|++++++|+++|++|+++.|..+...+ +..    .. .....++.++.+|   .+++.+++
T Consensus         5 ~~~~vlIt----Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~D~~~~~~v~~~~   75 (249)
T PRK12825          5 MGRVALVT----GAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVE----AV-EALGRRAQAVQADVTDKAALEAAV   75 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH----HH-HhcCCceEEEECCcCCHHHHHHHH
Confidence            46799999    999999999999999999999887876532211 000    00 0012245566666   55555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .+.     ++|+|||+++.                    |+.+..++++++    ++.+.++||++||.+.+.....   
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~---  152 (249)
T PRK12825         76 AAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG---  152 (249)
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC---
Confidence            432     47999999982                    233444555544    6677889999999876543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...+..+|...+.+++       +.+++++++|||.++++.............    .+. .     ....+++.+
T Consensus       153 ----~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~----~~~-~-----~~~~~~~~~  218 (249)
T PRK12825        153 ----RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK----DAE-T-----PLGRSGTPE  218 (249)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh----hcc-C-----CCCCCcCHH
Confidence                1122234555443332       248999999999999987544322221111    110 0     112378999


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      |+++++..+++++.. ..|++|+++++..+
T Consensus       219 dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        219 DIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            999999999977543 45699999988643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.72  E-value=4.1e-17  Score=147.31  Aligned_cols=206  Identities=14%  Similarity=0.152  Sum_probs=132.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+++...+....    +... ...+.++.+|   .+.+.++++
T Consensus         6 ~~~~vlIt----Gasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~Dl~~~~~~~~~~~   76 (262)
T PRK13394          6 NGKTAVVT----GAASGIGKEIALELARAGAAVAIADLNQDGANAVADE----INKA-GGKAIGVAMDVTNEDAVNAGID   76 (262)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----HHhc-CceEEEEECCCCCHHHHHHHHH
Confidence            46889999    9999999999999999999999999987543322110    0000 1234455566   555555544


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHH-HhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWA-KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a-~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||+++.                    |+.+    ++++++++ ++.+.++||++||...+...   +.
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~---~~  153 (262)
T PRK13394         77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS---PL  153 (262)
T ss_pred             HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC---CC
Confidence            32     37999999983                    2334    66778888 77778899999996543221   11


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCC-------cccCCCCCcc
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-------VPIPGSGMQF  265 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  265 (349)
                          ...+..+|...+.+++.       .+++++++||+.++++.....     +........       ..+++.+...
T Consensus       154 ----~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T PRK13394        154 ----KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ-----IPEQAKELGISEEEVVKKVMLGKTVD  224 (262)
T ss_pred             ----CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh-----hHhhhhccCCChHHHHHHHHhcCCCC
Confidence                11233466666554432       378999999999998864321     111110000       0112223345


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|++++|++++++.++..+.. .+|+.|++.++.
T Consensus       225 ~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        225 GVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            6799999999999999986543 346889998774

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.72  E-value=2.6e-17  Score=147.96  Aligned_cols=206  Identities=15%  Similarity=0.175  Sum_probs=128.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +++||||    ||+|++|++++++|+++|++|++++|+.+..+.+...    +. ....++.++.+|   .+++..+++.
T Consensus         1 ~~~vlIt----Ga~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~   71 (255)
T TIGR01963         1 GKTALVT----GAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKV----AT-DAGGSVIYLVADVTKEDEIADMIAA   71 (255)
T ss_pred             CCEEEEc----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEECCCCCHHHHHHHHHH
Confidence            3689999    9999999999999999999999999986443221100    00 011235556666   5544444332


Q ss_pred             C-----CccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      .     .+|+|||+++.                    |+.+...    +++++++.+.++||++||...+.....     
T Consensus        72 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~-----  146 (255)
T TIGR01963        72 AAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF-----  146 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC-----
Confidence            1     37999999983                    2333333    444456777889999999765443211     


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcc-------cCCCCCccee
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP-------IPGSGMQFTN  267 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  267 (349)
                        ...+..+|..++.+.+.       .+++++++||+.++++.....     +..........       ....+...++
T Consensus       147 --~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T TIGR01963       147 --KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQ-----IADQAKTRGIPEEQVIREVMLPGQPTKR  219 (255)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHH-----HHhhhcccCCCchHHHHHHHHccCcccc
Confidence              11233456555544432       389999999999998753211     11111111110       0112334567


Q ss_pred             eeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCc
Q 018900          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~  300 (349)
                      +++++|+|++++.+++++. ..+|++|++.++..
T Consensus       220 ~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       220 FVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             CcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            9999999999999998753 34568999998753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.72  E-value=9.7e-17  Score=143.79  Aligned_cols=201  Identities=14%  Similarity=0.165  Sum_probs=130.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|+.+...+..       .++..  ..+.++.+|   .+++.++
T Consensus         5 ~~~~ilIt----Gasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~~   73 (251)
T PRK12826          5 EGRVALVT----GAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA-------ELVEAAGGKARARQVDVRDRAALKAA   73 (251)
T ss_pred             CCCEEEEc----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            46789999    99999999999999999999999999854332111       11111  124555555   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +++.     ++|+|||+++.                    |+.++.++++++    ++.+.++||++||...++...   
T Consensus        74 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~---  150 (251)
T PRK12826         74 VAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY---  150 (251)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC---
Confidence            6532     47999999973                    234445566554    456678999999976651111   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         .....+..+|..++.+++.       .+++++++||+.++++.........+...+....++         ..++++
T Consensus       151 ---~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  218 (251)
T PRK12826        151 ---PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEP  218 (251)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCH
Confidence               1111233456555554433       389999999999999865432111112222222221         146899


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+++++..++..+.. .+|++|++.+|.
T Consensus       219 ~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        219 EDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999998877543 356999998875

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.71  E-value=5.9e-17  Score=145.87  Aligned_cols=203  Identities=13%  Similarity=0.130  Sum_probs=131.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce--ecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~~~  147 (349)
                      .+++||||    ||+|++|++++++|+++|++|++++|+.+...+..       .++  ...++..+.+|   .+++.++
T Consensus         3 ~~~~vlIt----G~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   71 (258)
T PRK12429          3 KGKVALVT----GAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA-------EALQKAGGKAIGVAMDVTDEEAINAG   71 (258)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            35789999    99999999999999999999999999875443211       111  11234556666   5566555


Q ss_pred             hcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +...     .+|+|||+++.                    |+.+    ++.++.++++.+.++||++||...+....+  
T Consensus        72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--  149 (258)
T PRK12429         72 IDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG--  149 (258)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC--
Confidence            5432     47999999982                    3334    666777777778899999999754432111  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhC--CCc-----ccCCCCCc
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK--RPV-----PIPGSGMQ  264 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~  264 (349)
                           ...+..+|...+.+.+       ..++++.++||+.++++.....     +......  .+.     ..+.....
T Consensus       150 -----~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  219 (258)
T PRK12429        150 -----KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVP  219 (258)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCC
Confidence                 1122235655554332       2378999999999998764321     1111111  010     01122223


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ...+++++|+|+++..++.+... .+|+.|++.+|
T Consensus       220 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        220 QKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             ccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            35799999999999999987543 34688999876

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.4e-16  Score=142.07  Aligned_cols=212  Identities=15%  Similarity=0.143  Sum_probs=139.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |++++|||    ||+|+||+.++++|+++|++|++++|+.+....+.       .++...++..+.+|   .+++..++.
T Consensus         1 ~~k~ilIt----Gat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~   69 (257)
T PRK07074          1 TKRTALVT----GAAGGIGQALARRFLAAGDRVLALDIDAAALAAFA-------DALGDARFVPVACDLTDAASLAAALA   69 (257)
T ss_pred             CCCEEEEE----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHhcCCceEEEEecCCCHHHHHHHHH
Confidence            45789999    99999999999999999999999999865432211       11111234455555   566655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+++.                    |+.+..++++++    ++.+.++||++||...+....     
T Consensus        70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  144 (257)
T PRK07074         70 NAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALG-----  144 (257)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCC-----
Confidence            32     37999999983                    233444444444    555667899999954322111     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ...+..+|...+.+++.       +++++.++|||+++++.....  ....+.......         ....+++++
T Consensus       145 ---~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  212 (257)
T PRK07074        145 ---HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATP  212 (257)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCH
Confidence               12344567776655543       279999999999988753211  011122222111         122468999


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHH
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQ  312 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~  312 (349)
                      +|++++++.++.+... ..|+++++.++......|+.+.+.+
T Consensus       213 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        213 DDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999999999976433 3468999999998889999988754

>PRK09135 pteridine reductase; Provisional

Probab=99.71  E-value=1.9e-16  Score=141.72  Aligned_cols=206  Identities=17%  Similarity=0.216  Sum_probs=130.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      +.++||||    ||+|++|++++++|+++|++|++++|..+. .+.+..    .+.+.....+.++.+|   .+++..++
T Consensus         5 ~~~~vlIt----Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~   76 (249)
T PRK09135          5 SAKVALIT----GGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAA----ELNALRPGSAAALQADLLDPDALPELV   76 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH----HHHhhcCCceEEEEcCCCCHHHHHHHH
Confidence            35789999    999999999999999999999999986432 111100    0011111235556666   55566655


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +..     ++|+|||+++.                    |+.++.++++++...   .-.+++.+++...  .   .+..
T Consensus        77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~  151 (249)
T PRK09135         77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA--E---RPLK  151 (249)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh--c---CCCC
Confidence            542     47999999982                    567788888887532   1235666665322  1   1111


Q ss_pred             CCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                        ....+..+|..+|.+++..      +++++++||+.++++.....+...+......+.++...         .+++|+
T Consensus       152 --~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~d~  220 (249)
T PRK09135        152 --GYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRI---------GTPEDI  220 (249)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCC---------cCHHHH
Confidence              1122445777777766542      58999999999999986543333333333333322212         247999


Q ss_pred             HHHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          275 SSMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                      ++++..++......+|++|++++++.++
T Consensus       221 a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        221 AEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HHHHHHHcCccccccCcEEEECCCeecc
Confidence            9999777665443456899999987654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2.8e-16  Score=139.63  Aligned_cols=192  Identities=16%  Similarity=0.206  Sum_probs=126.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+.       ..++...+++++.+|   .+++.++++
T Consensus         6 ~~k~vlIt----Gatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (239)
T PRK12828          6 QGKVVAIT----GGFGGLGRATAAWLAARGARVALIGRGAAPLSQT-------LPGVPADALRIGGIDLVDPQAARRAVD   74 (239)
T ss_pred             CCCEEEEE----CCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHH-------HHHHhhcCceEEEeecCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999976432211       111222234444444   566655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+++.                    |+.++.++++++    ++.+.++||++||...++....    
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  150 (239)
T PRK12828         75 EVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG----  150 (239)
T ss_pred             HHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC----
Confidence            32     47999999883                    234455555544    4567889999999887654321    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|...+.+++       +.++++.++|||+++++.....                .+.  .....+++++|
T Consensus       151 ---~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~----------------~~~--~~~~~~~~~~d  209 (239)
T PRK12828        151 ---MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD----------------MPD--ADFSRWVTPEQ  209 (239)
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc----------------CCc--hhhhcCCCHHH
Confidence               1112235555444443       3489999999999998732211                000  01123789999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +++++..++.+... ..|+.+++.+++.
T Consensus       210 va~~~~~~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        210 IAAVIAFLLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHHHhCcccccccceEEEecCCEe
Confidence            99999999987643 3468899988763

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-16  Score=145.85  Aligned_cols=216  Identities=14%  Similarity=0.043  Sum_probs=135.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....+..        .....+..+.+|   .+++..++.
T Consensus         2 ~~k~vlIt----Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~   69 (275)
T PRK08263          2 MEKVWFIT----GASRGFGRAWTEAALERGDRVVATARDTATLADLAE--------KYGDRLLPLALDVTDRAAVFAAVE   69 (275)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hccCCeeEEEccCCCHHHHHHHHH
Confidence            45789999    999999999999999999999999998754432211        011233444444   556555544


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||++|.                    |+.++.    .++..+++.+.+++|++||...+.....    
T Consensus        70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----  145 (275)
T PRK08263         70 TAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM----  145 (275)
T ss_pred             HHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----
Confidence            32     47999999983                    334443    4444456677789999999766543221    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCch----HHHHHHHHhCCCcccCCCCCcceee-
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPVPIPGSGMQFTNI-  268 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-  268 (349)
                         ...+..+|..++.+.+       .+|++++++|||.+..+.......    ......+...     .+.......+ 
T Consensus       146 ---~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  217 (275)
T PRK08263        146 ---SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREE-----LAEQWSERSVD  217 (275)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHH-----HHHHHHhccCC
Confidence               1123345666544332       248999999999887654321100    0000111000     0000011234 


Q ss_pred             eeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHH
Q 018900          269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA  313 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~  313 (349)
                      ++.+|++++++.+++.+.... +.++...++.+++.++.+.+.+-
T Consensus       218 ~~p~dva~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        218 GDPEAAAEALLKLVDAENPPL-RLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             CCHHHHHHHHHHHHcCCCCCe-EEEeCchHHHHHHHHHHHHHHHH
Confidence            789999999999999876543 45554455778999999988874

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.68  E-value=8.9e-16  Score=139.90  Aligned_cols=220  Identities=16%  Similarity=0.194  Sum_probs=140.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+........    ..... ..++.++.+|   .+++..++
T Consensus         6 ~~k~vlIt----Gasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (276)
T PRK05875          6 QDRTYLVT----GGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEE----IEALKGAGAVRYEPADVTDEDQVARAV   77 (276)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HHhccCCCceEEEEcCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999986443221110    00000 1234455555   55565555


Q ss_pred             cCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|+|||+++.                     |+.+..++++++    .+.+..+||++||...+.....  
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--  155 (276)
T PRK05875         78 DAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW--  155 (276)
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC--
Confidence            532     47999999972                     233444455443    3344568999999776543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ...+..+|...|.+++..       +++++++|||.+.++....... ......+....+         ...+++
T Consensus       156 -----~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  221 (276)
T PRK05875        156 -----FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP---------LPRVGE  221 (276)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC---------CCCCcC
Confidence                 123445777777766543       6899999999887654322100 111111211111         123567


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc----CHHHHHHHHHHHhCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV----TLDGMAKLCAQAAGL  316 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~----t~~el~~~~~~~~g~  316 (349)
                      ++|++++++.++.++.. ..|+++++.+++.+    +..|+++.+.+..|.
T Consensus       222 ~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        222 VEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             HHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            99999999999987654 34689999998766    788888877766554

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.7e-16  Score=138.10  Aligned_cols=199  Identities=17%  Similarity=0.219  Sum_probs=132.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|..+....+.       .++.  ..++..+.+|   .+++.++
T Consensus         5 ~~k~vlIt----Gasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (250)
T PRK07774          5 DDKVAIVT----GAAGGIGQAYAEALAREGASVVVADINAEGAERVA-------KQIVADGGTAIAVQVDVSDPDSAKAM   73 (250)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            46789999    99999999999999999999999999864332211       0111  1123344455   5555554


Q ss_pred             hcCC-----CccEEEeCCCC-----------------------ChhhHHHHHHHHHh----CCCcEEEEeccccccCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-----------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ++..     ++|+|||+++.                       |+.++.++++++..    .+.++||++||...|... 
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  152 (250)
T PRK07774         74 ADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS-  152 (250)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc-
Confidence            4432     47999999983                       34455566665543    345799999998776532 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                               ..+..+|.+++.+++..       ++.+++++||.+..+.........+...+.++.+...         +
T Consensus       153 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~  214 (250)
T PRK07774        153 ---------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR---------M  214 (250)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCC---------C
Confidence                     12445788777665543       7889999999987776443223334444444443221         3


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+++|++++++.++..... .+|++|++.+++.+
T Consensus       215 ~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        215 GTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             cCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            4689999999999887532 45689999998754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.65  E-value=4.5e-16  Score=140.46  Aligned_cols=212  Identities=13%  Similarity=0.108  Sum_probs=128.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~  148 (349)
                      |+++||||    ||+|+||++++++|+++|++|++++|+.+.........    .... ...+.++.+|   .+++..++
T Consensus         1 m~k~ilIt----G~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~i~~~~   72 (259)
T PRK12384          1 MNQVAVVI----GGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI----NAEYGEGMAYGFGADATSEQSVLALS   72 (259)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH----HHhcCCceeEEEEccCCCHHHHHHHH
Confidence            45789999    99999999999999999999999999764433221100    0000 0234555665   45555554


Q ss_pred             cC-----CCccEEEeCCCC--------------------ChhhHH----HHHHHHHhCC-CcEEEEecccc-ccCCCCCC
Q 018900          149 GG-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSG-VKQFLFISSAG-IYKPADEP  197 (349)
Q Consensus       149 ~~-----~~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~g-v~~~i~~Ss~~-vy~~~~~~  197 (349)
                      ..     .++|+|||+++.                    |+.++.    .++..+++.+ -.++|++||.. .++...  
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~--  150 (259)
T PRK12384         73 RGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH--  150 (259)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC--
Confidence            43     247999999982                    344444    4444444455 35899999853 444221  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHH--hCCCcccCCCCCcceee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV--RKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  268 (349)
                            ...+..+|.+.+.+.+       +.|+++.++|||.++++......+..+.....  .+.....+.++.....+
T Consensus       151 ------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T PRK12384        151 ------NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG  224 (259)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence                  1223446766444332       34899999999998876543322222211110  00001111222334567


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++.+|++++++.++.+... ..|++|++.+|+.
T Consensus       225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             CCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            8999999999988876543 3568999998863

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=2.4e-15  Score=134.13  Aligned_cols=198  Identities=16%  Similarity=0.215  Sum_probs=126.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|+++....+.       .++.  ...+.++.+|   ++++.++
T Consensus         4 ~~~~ilIt----Gasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T PRK05653          4 QGKTALVT----GASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-------AELRAAGGEARVLVFDVSDEAAVRAL   72 (246)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHH
Confidence            35789999    99999999999999999999999999875432211       1111  1234455555   5556555


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccc-cCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGI-YKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~v-y~~~~~~  197 (349)
                      +++.     ++|+|||+++.                    |+.+..++++++    ++.+.++||++||... ++...  
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~--  150 (246)
T PRK05653         73 IEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG--  150 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC--
Confidence            5432     37999999973                    233445555544    5667789999999653 22111  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...+..+|...+.+.+.       .+++++++||+.++++.... .............+         ...+++
T Consensus       151 ------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~  214 (246)
T PRK05653        151 ------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-LPEEVKAEILKEIP---------LGRLGQ  214 (246)
T ss_pred             ------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-hhHHHHHHHHhcCC---------CCCCcC
Confidence                  11123356554443332       37899999999999886542 11111111111111         144688


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+++++..++..... .++++|++++|+
T Consensus       215 ~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        215 PEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            99999999999976433 356899999885

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.65  E-value=4.4e-16  Score=140.46  Aligned_cols=207  Identities=16%  Similarity=0.169  Sum_probs=133.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++...       + ...+..+.+|   .+++..++.
T Consensus         5 ~~~~vlIt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~   72 (257)
T PRK07067          5 QGKVALLT----GAASGIGEAVAERYLAEGARVVIADIKPARARLAALE-------I-GPAAIAVSLDVTRQDSIDRIVA   72 (257)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH-------h-CCceEEEEccCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987544332111       1 1134445555   566666555


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C-CcEEEEecccc-ccCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G-VKQFLFISSAG-IYKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~----g-v~~~i~~Ss~~-vy~~~~~~~  198 (349)
                      ..     ++|+|||+++.                    |+.+..++++++...    + ..+||++||.. .++..    
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  148 (257)
T PRK07067         73 AAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA----  148 (257)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC----
Confidence            32     48999999882                    455677777766432    1 24899999954 33321    


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHH---hCCCcccCCCCCcceee
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  268 (349)
                          ....+..+|...+.+.+       ..+++++++|||.++++.....  ...+....   .+.....++.+.....+
T Consensus       149 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (257)
T PRK07067        149 ----LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV--DALFARYENRPPGEKKRLVGEAVPLGRM  222 (257)
T ss_pred             ----CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh--hhhhhhccCCCHHHHHHHHhhcCCCCCc
Confidence                12234457777665543       2489999999999998753221  00011000   00001112223334568


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      ++.+|+|++++.++..+.. ..|++|++.+|+.+
T Consensus       223 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        223 GVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             cCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            8999999999999987644 45699999988754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.65  E-value=5.4e-15  Score=133.50  Aligned_cols=197  Identities=14%  Similarity=0.130  Sum_probs=127.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.. ..+..       .++..  ..+.++.+|   .+++.++
T Consensus         7 ~~k~vlVt----Gas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (260)
T PRK12823          7 AGKVVVVT----GAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVA-------AELRAAGGEALALTADLETYAGAQAA   74 (260)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHH-------HHHHhcCCeEEEEEEeCCCHHHHHHH
Confidence            46889999    99999999999999999999999999742 11110       11111  123344444   5555555


Q ss_pred             hcCC-----CccEEEeCCCCC---------------------h----hhHHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGKN---------------------L----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~---------------------~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||+|+..                     +    ..++.++..+++.+..+||++||...|+..   
T Consensus        75 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---  151 (260)
T PRK12823         75 MAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN---  151 (260)
T ss_pred             HHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC---
Confidence            4432     489999999731                     1    123466677777777799999998766421   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCC------------CCchHHHHHHHHhCCCccc
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNN------------KDCEEWFFDRIVRKRPVPI  258 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~  258 (349)
                            ...+..+|.+.+.+.+.       .++++..++||+++++...            ......+......+.++..
T Consensus       152 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (260)
T PRK12823        152 ------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKR  225 (260)
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCccc
Confidence                  12345678776665543       2899999999999987311            0112223333333333222


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                               +.+.+|++++++.++.+... ..|+++++.+++
T Consensus       226 ---------~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        226 ---------YGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             ---------CCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence                     34689999999999876533 356899998775

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.6e-15  Score=136.10  Aligned_cols=193  Identities=16%  Similarity=0.098  Sum_probs=119.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....+...        ...++..+.+|   .+++..+++
T Consensus         3 ~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~--------~~~~~~~~~~D~~d~~~~~~~~~   70 (277)
T PRK06180          3 SMKTWLIT----GVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL--------HPDRALARLLDVTDFDAIDAVVA   70 (277)
T ss_pred             CCCEEEEe----cCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh--------cCCCeeEEEccCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987544322111        11234444454   556655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||++|.                    |+.++.+++++    +++.+.++||++||.+.+....     
T Consensus        71 ~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~-----  145 (277)
T PRK06180         71 DAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP-----  145 (277)
T ss_pred             HHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC-----
Confidence            32     37999999984                    34456666665    4555667999999976543211     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC------chHHHHHHHHhCCCcccCCCCCccee
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                        ....+..+|..++.+.+.       +|++++++|||.+.++.....      ....+...............+   ..
T Consensus       146 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  220 (277)
T PRK06180        146 --GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG---KQ  220 (277)
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---CC
Confidence              111233466665554432       489999999999977643211      111111110000000000111   23


Q ss_pred             eeeHHHHHHHHHHHhcCCCc
Q 018900          268 IAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~  287 (349)
                      +.+++|++++++.+++++..
T Consensus       221 ~~~~~dva~~~~~~l~~~~~  240 (277)
T PRK06180        221 PGDPAKAAQAILAAVESDEP  240 (277)
T ss_pred             CCCHHHHHHHHHHHHcCCCC
Confidence            46799999999999998765

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5.7e-15  Score=132.35  Aligned_cols=208  Identities=18%  Similarity=0.158  Sum_probs=128.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+. ...+..    .+.. ...++.++.+|   ++++..++
T Consensus         5 ~~k~vlIt----GasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~----~l~~-~~~~~~~~~~D~~~~~~~~~~~   75 (248)
T PRK07806          5 PGKTALVT----GSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVA----EIEA-AGGRASAVGADLTDEESVAALM   75 (248)
T ss_pred             CCcEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHH----HHHh-cCCceEEEEcCCCCHHHHHHHH
Confidence            35789999    999999999999999999999999997532 111100    0000 01234455555   56665555


Q ss_pred             cC-----CCccEEEeCCCC--------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCC
Q 018900          149 GG-----VTFDVVLDNNGK--------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (349)
Q Consensus       149 ~~-----~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  207 (349)
                      +.     .++|+|||+++.              |+.++.++++++...  ...+||++||..........+...  ...+
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~--~~~Y  153 (248)
T PRK07806         76 DTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPE--YEPV  153 (248)
T ss_pred             HHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCcc--ccHH
Confidence            42     147999999872              566788999988764  235899999954321111011110  1123


Q ss_pred             CCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHH
Q 018900          208 DAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (349)
Q Consensus       208 ~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  280 (349)
                      ..+|..+|.+++.       .++++++++|+.+-++...     .+....   .+-...........+++++|++++++.
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~  225 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA-----TLLNRL---NPGAIEARREAAGKLYTVSEFAAEVAR  225 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh-----hhhccC---CHHHHHHHHhhhcccCCHHHHHHHHHH
Confidence            4578787776654       3788999998876554211     111100   000000000011358999999999999


Q ss_pred             HhcCCCccCCCEEEeeCCCc
Q 018900          281 AVENPEAASSNIFNLVSDRA  300 (349)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~~  300 (349)
                      +++.+.. +|++|++++++.
T Consensus       226 l~~~~~~-~g~~~~i~~~~~  244 (248)
T PRK07806        226 AVTAPVP-SGHIEYVGGADY  244 (248)
T ss_pred             Hhhcccc-CccEEEecCccc
Confidence            9996544 459999999874

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.9e-15  Score=138.06  Aligned_cols=206  Identities=13%  Similarity=0.115  Sum_probs=128.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHh--
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGN--  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~--  146 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|+.+....+....    ... .+..+.++.+|   ++++..  
T Consensus         2 ~~k~~lIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~   73 (280)
T PRK06914          2 NKKIAIVT----GASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA----TQLNLQQNIKVQQLDVTDQNSIHNFQ   73 (280)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH----HhcCCCCceeEEecCCCCHHHHHHHH
Confidence            35689999    99999999999999999999999999865433221100    000 01245555666   444443  


Q ss_pred             -hhcCC-CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEecccc-ccCCCCCCCC
Q 018900          147 -VVGGV-TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       147 -~~~~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                       +.+.. ++|+|||+++.                    |+.++.+++++    +++.+.++||++||.. .++....   
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---  150 (280)
T PRK06914         74 LVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGL---  150 (280)
T ss_pred             HHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCC---
Confidence             22222 47999999983                    33444455554    5667778999999964 4443211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC------------chHHHHHHHHhCCCcccCC
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD------------CEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~------------~~~~~~~~~~~~~~~~~~~  260 (349)
                           ..+..+|..++.+++.       ++++++++|||.+..+.....            .....+..+....     .
T Consensus       151 -----~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  220 (280)
T PRK06914        151 -----SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-----N  220 (280)
T ss_pred             -----chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-----h
Confidence                 1233467776665543       389999999999988743211            0011111111100     0


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCH
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  303 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~  303 (349)
                        .....+++++|+|++++.+++++...  ..|+++++..+++
T Consensus       221 --~~~~~~~~~~dva~~~~~~~~~~~~~--~~~~~~~~~~~~~  259 (280)
T PRK06914        221 --SGSDTFGNPIDVANLIVEIAESKRPK--LRYPIGKGVKLMI  259 (280)
T ss_pred             --hhhhccCCHHHHHHHHHHHHcCCCCC--cccccCCchHHHH
Confidence              11234688999999999999987762  4788887654443

>PRK06194 hypothetical protein; Provisional

Probab=99.63  E-value=3.5e-15  Score=136.78  Aligned_cols=199  Identities=16%  Similarity=0.116  Sum_probs=121.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.  ..++.++.+|   .+++.++
T Consensus         5 ~~k~vlVt----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          5 AGKVAVIT----GAASGFGLAFARIGAALGMKLVLADVQQDALDRAV-------AELRAQGAEVLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            45789999    99999999999999999999999999764433211       1111  1234446666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCC------cEEEEeccccccC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGV------KQFLFISSAGIYK  192 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv------~~~i~~Ss~~vy~  192 (349)
                      ++..     ++|+|||+||.                    |+.++.+++++    +++.+.      .++|++||...+.
T Consensus        74 ~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  153 (287)
T PRK06194         74 ADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL  153 (287)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc
Confidence            5532     37999999983                    33444444443    555543      5899999976554


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh----h-----CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE----N-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~----~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      ....       ...+..+|...+.+++.    +     ++++..+.||.+..+          +.....+++..+.+++.
T Consensus       154 ~~~~-------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----------~~~~~~~~~~~~~~~~~  216 (287)
T PRK06194        154 APPA-------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----------IWQSERNRPADLANTAP  216 (287)
T ss_pred             CCCC-------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----------cccccccCchhcccCcc
Confidence            3211       12244567776665543    2     345556666555332          22233445556666666


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      +.+++++++|....+....                 .++..|+++.+.+.+..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~-----------------~~s~~dva~~i~~~~~~  252 (287)
T PRK06194        217 PTRSQLIAQAMSQKAVGSG-----------------KVTAEEVAQLVFDAIRA  252 (287)
T ss_pred             ccchhhHHHHHHHhhhhcc-----------------CCCHHHHHHHHHHHHHc
Confidence            7777777766665542110                 05666666666665543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=3.3e-15  Score=133.96  Aligned_cols=202  Identities=13%  Similarity=0.154  Sum_probs=127.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+++||||    ||+|++|++++++|+++|++|++++|+.+...++...    +..  ..++.++.+|   ++++..+++
T Consensus         4 ~~~~vlIt----Gasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~   73 (251)
T PRK07231          4 EGKVAIVT----GASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAE----ILA--GGRAIAVAADVSDEADVEAAVA   73 (251)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----Hhc--CCeEEEEECCCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987544322110    000  1234556665   666666654


Q ss_pred             CC-----CccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||+++.                     |+.+    ++.+++++++.+.++||++||...+.+....  
T Consensus        74 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  151 (251)
T PRK07231         74 AALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGL--  151 (251)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCc--
Confidence            33     48999999984                     1222    4455556666677899999998766543211  


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch---HHHHHHHHhCCCcccCCCCCcceeee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                           ..+..+|...+.+++.       .+++++.++||.+..+.......   ...........         ....++
T Consensus       152 -----~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  217 (251)
T PRK07231        152 -----GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI---------PLGRLG  217 (251)
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC---------CCCCCc
Confidence                 1123456555443332       28899999999986654322100   01111111111         123467


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +++|+|++++.++.++.. .+|..+.+.++..
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        218 TPEDIANAALFLASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             CHHHHHHHHHHHhCccccCCCCCeEEECCCcc
Confidence            999999999999976643 3457788877653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.62  E-value=7.9e-15  Score=132.52  Aligned_cols=207  Identities=16%  Similarity=0.139  Sum_probs=125.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .+.++||||    ||+|++|++++++|+++|++|++++|+.+..+.+..       +.....+.++.+|   ++++..++
T Consensus         9 ~~~~~vlIt----Ga~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~   77 (264)
T PRK12829          9 LDGLRVLVT----GGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAA-------RLPGAKVTATVADVADPAQVERVF   77 (264)
T ss_pred             cCCCEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHhcCceEEEEccCCCHHHHHHHH
Confidence            356899999    999999999999999999999999997654332211       0111123445555   56665555


Q ss_pred             cCC-----CccEEEeCCCCC---------------------hhhHHHHHHHH----HhCCC-cEEEEeccccc-cCCCCC
Q 018900          149 GGV-----TFDVVLDNNGKN---------------------LDAVRPVADWA----KSSGV-KQFLFISSAGI-YKPADE  196 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~~---------------------~~~~~~ll~~a----~~~gv-~~~i~~Ss~~v-y~~~~~  196 (349)
                      +..     ++|+|||+++..                     +.++.++++++    +..+. ++|+++||... ++... 
T Consensus        78 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~-  156 (264)
T PRK12829         78 DTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG-  156 (264)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC-
Confidence            432     479999999842                     23445555544    44455 67888887542 22211 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccC----CCCCcc
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIP----GSGMQF  265 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  265 (349)
                             ...+..+|...+.+++.       .+++++++|||+++++..... .......  .+......    ......
T Consensus       157 -------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~  226 (264)
T PRK12829        157 -------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV-IEARAQQ--LGIGLDEMEQEYLEKISL  226 (264)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH-hhhhhhc--cCCChhHHHHHHHhcCCC
Confidence                   11233466666665543       379999999999998864321 1000000  00000000    000011


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCc
Q 018900          266 TNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  300 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~  300 (349)
                      ..+++++|+++++..++.... ..+|+.|++.++..
T Consensus       227 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        227 GRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             CCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            247999999999999887542 34568999998753

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.61  E-value=4.6e-15  Score=140.79  Aligned_cols=236  Identities=15%  Similarity=0.176  Sum_probs=156.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC---CeEEEEEcCCCCcccC-------CCCCCCcccce---ecCCCeEEE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKM-------KKPPFNRFNEI---VSAGGKTVW  138 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~~-------~~~~~~~~~~l---~~~~~~~~~  138 (349)
                      -.+++|+||    |||||+|+-+++.|+..-   -.++.+.|.+...+..       ....+.++.+.   .-..+..+.
T Consensus        10 ~~~k~i~vT----G~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~   85 (467)
T KOG1221|consen   10 YKNKTIFVT----GATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA   85 (467)
T ss_pred             hCCCeEEEE----cccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence            357899999    999999999999999863   3789999976433211       01000011000   113556677


Q ss_pred             cC---------hhhHHhhhcCCCccEEEeCCC-------------CChhhHHHHHHHHHhCC-CcEEEEeccccccCC--
Q 018900          139 GD---------PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKP--  193 (349)
Q Consensus       139 ~D---------~~~l~~~~~~~~~d~Vi~~a~-------------~~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~--  193 (349)
                      ||         ..++..+..+  +|+|||+|+             .|..|++++++.|++.. .+-|+++|++-+...  
T Consensus        86 GDi~~~~LGis~~D~~~l~~e--V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~  163 (467)
T KOG1221|consen   86 GDISEPDLGISESDLRTLADE--VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVG  163 (467)
T ss_pred             ccccCcccCCChHHHHHHHhc--CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccc
Confidence            77         3556645545  599999999             37899999999999985 688999999765411  


Q ss_pred             -CCCCCCCCCC------------------------------CCCCCCChHHHHHHHHhh--CCcEEEEecCceeeCCCCC
Q 018900          194 -ADEPPHVEGD------------------------------VVKPDAGHVQVEKYISEN--FSNWASFRPQYMIGSGNNK  240 (349)
Q Consensus       194 -~~~~~~~e~~------------------------------~~~~~~~k~~~ek~~~~~--~~~~~ilR~~~v~g~~~~~  240 (349)
                       ..+.++.+..                              +..+.-+|.-+|.++.+.  +++.+|+||+.|......+
T Consensus       164 ~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  164 HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCC
Confidence             1222222211                              111223466677777665  7999999999998865443


Q ss_pred             CchHHHHHHHH----------hCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc----cCCCEEEeeCC--CccCHH
Q 018900          241 DCEEWFFDRIV----------RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA----ASSNIFNLVSD--RAVTLD  304 (349)
Q Consensus       241 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~----~~~~~~~i~~~--~~~t~~  304 (349)
                        ++.|++.+.          +|.--.+.++.+...++|.+|.++++++.+...-..    .+..+||++++  .++++.
T Consensus       244 --~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~  321 (467)
T KOG1221|consen  244 --FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG  321 (467)
T ss_pred             --CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence              112233332          122224456777888999999999999977632111    12359999986  489999


Q ss_pred             HHHHHHHHHhC
Q 018900          305 GMAKLCAQAAG  315 (349)
Q Consensus       305 el~~~~~~~~g  315 (349)
                      ++++...+..-
T Consensus       322 ~~~e~~~~~~~  332 (467)
T KOG1221|consen  322 DFIELALRYFE  332 (467)
T ss_pred             HHHHHHHHhcc
Confidence            99999998764

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.61  E-value=2.4e-15  Score=134.99  Aligned_cols=202  Identities=13%  Similarity=0.119  Sum_probs=125.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|++|++++++|+++|++|+++.|+.+...+...       ++ ....+.++.+|   ++++.+++
T Consensus         4 ~~k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~   72 (252)
T PRK06138          4 AGRVAIVT----GAGSGIGRATAKLFAREGARVVVADRDAEAAERVAA-------AIAAGGRAFARQGDVGSAEAVEALV   72 (252)
T ss_pred             CCcEEEEe----CCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHH-------HHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            46799999    999999999999999999999999998654322111       11 01234455555   56666655


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCcEEEEeccccc-cCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGI-YKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~~~  198 (349)
                      +..     ++|+|||+++.                    |+.++    +.++.++++.+.++||++||... ++....  
T Consensus        73 ~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~--  150 (252)
T PRK06138         73 DFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR--  150 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc--
Confidence            432     48999999983                    22333    44555666777789999999754 332221  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc-eeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF-TNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~  270 (349)
                            ..+..+|...+.+++.       .+++++++|||+++++.....     +........+.......+. ..+++
T Consensus       151 ------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  219 (252)
T PRK06138        151 ------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI-----FARHADPEALREALRARHPMNRFGT  219 (252)
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh-----hccccChHHHHHHHHhcCCCCCCcC
Confidence                  1233456665555443       289999999999988753211     0000000000000000111 23678


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ++|+++.++.++.++.. ..|..+.+.++
T Consensus       220 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        220 AEEVAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            99999999999988754 34577877765

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.61  E-value=9.2e-15  Score=133.26  Aligned_cols=199  Identities=15%  Similarity=0.207  Sum_probs=125.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+...+...    .... ....+.++.+|   .+++.++++
T Consensus         9 ~~~~vlVt----Ga~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   79 (274)
T PRK07775          9 DRRPALVA----GASSGIGAATAIELAAAGFPVALGARRVEKCEELVD----KIRA-DGGEAVAFPLDVTDPDSVKSFVA   79 (274)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHh-cCCeEEEEECCCCCHHHHHHHHH
Confidence            45789999    999999999999999999999999987643322110    0000 01134444555   566666555


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+++.                    |+.++.++++++    ++.+..+||++||...|.....    
T Consensus        80 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----  155 (274)
T PRK07775         80 QAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH----  155 (274)
T ss_pred             HHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC----
Confidence            32     47999999983                    334455555544    3445668999999876653321    


Q ss_pred             CCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCC---CCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          201 EGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                         ...+..+|.+.+.+++..       |++++++|||.+..+...   ......++......      + +.....+++
T Consensus       156 ---~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~  225 (274)
T PRK07775        156 ---MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW------G-QARHDYFLR  225 (274)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh------c-ccccccccC
Confidence               112345677777766542       899999999987554221   11111222222111      1 112345899


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEee
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLV  296 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~  296 (349)
                      ++|+|++++.+++.+.  ++.+||+.
T Consensus       226 ~~dva~a~~~~~~~~~--~~~~~~~~  249 (274)
T PRK07775        226 ASDLARAITFVAETPR--GAHVVNME  249 (274)
T ss_pred             HHHHHHHHHHHhcCCC--CCCeeEEe
Confidence            9999999999998764  24688877

>PRK09186 flagellin modification protein A; Provisional

Probab=99.61  E-value=5.2e-15  Score=133.19  Aligned_cols=205  Identities=16%  Similarity=0.114  Sum_probs=127.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++......   .......+.++.+|   ++++.++++
T Consensus         3 ~~k~vlIt----Gas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (256)
T PRK09186          3 KGKTILIT----GAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLG---KEFKSKKLSLVELDITDQESLEEFLS   75 (256)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHH---hhcCCCceeEEEecCCCHHHHHHHHH
Confidence            36899999    999999999999999999999999998754432110000   00011223344555   666666665


Q ss_pred             CC-----CccEEEeCCCC-----------------------Ch----hhHHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK-----------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-----------------------~~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ..     ++|+|||+|+.                       |+    ..++.++..+++.+.++||++||...+..... 
T Consensus        76 ~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  154 (256)
T PRK09186         76 KSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-  154 (256)
T ss_pred             HHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-
Confidence            42     27999999852                       12    23456666777777789999999654322211 


Q ss_pred             CCCCCCC----CCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          198 PHVEGDV----VKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       198 ~~~e~~~----~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ...++.+    ..+..+|...+.+.+       ..++++++++||.++++...     .+........    +     ..
T Consensus       155 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-----~~~~~~~~~~----~-----~~  220 (256)
T PRK09186        155 EIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-----AFLNAYKKCC----N-----GK  220 (256)
T ss_pred             hhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH-----HHHHHHHhcC----C-----cc
Confidence            1111111    234456776666543       23789999999988764311     1222221111    1     12


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+++.+|+|++++.++.+... .+|+++.+.+|.
T Consensus       221 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        221 GMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             CCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            368999999999999986643 356788877764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.6e-14  Score=129.27  Aligned_cols=203  Identities=14%  Similarity=0.183  Sum_probs=127.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|......+........... ....+.++.+|   .+++.++++
T Consensus         5 ~~~~ilIt----Gasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          5 DSRRVLIT----GGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999887432111000000000000 01234556666   555555553


Q ss_pred             C-----CCccEEEeCCCC--------------------ChhhHHHHHHHHH-----hCCCcEEEEeccccccCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~-----~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .     .++|.|||+++.                    |+.++.++++++.     +.+.++||++||...+....+   
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  156 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG---  156 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC---
Confidence            2     247999999983                    3456777787776     556789999999765433211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...+..+|...+.+.+.       .+++++++|||.+.++........   ..+....+.         ..+.+.+
T Consensus       157 ----~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~  220 (249)
T PRK12827        157 ----QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPD  220 (249)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHH
Confidence                11233456655544332       389999999999999865443211   122222221         1235789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |++++++.++.+... .+|+.+++.++.
T Consensus       221 ~va~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        221 EVAALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence            999999999876533 356888887763

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.60  E-value=9.9e-15  Score=130.80  Aligned_cols=202  Identities=14%  Similarity=0.163  Sum_probs=126.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++...    ..+ ...++.++.+|   .+++++++.
T Consensus         2 ~~~~ilIt----Gas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~d~~~~~~~~~~~~   72 (250)
T TIGR03206         2 KDKTAIVT----GGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAAD----IRA-KGGNAQAFACDITDRDSVDTAVA   72 (250)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH----HHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence            46889999    9999999999999999999999999987543321100    000 01235556665   555555554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+++.                    |+.+..+++++    +++.+.++||++||.+.+.....    
T Consensus        73 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----  148 (250)
T TIGR03206        73 AAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----  148 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----
Confidence            22     37999999982                    34445555444    44667789999999876654321    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                         ...+..+|.+.+.+.+.       .+++++++|||.++++.....     ....+...+....+.         ..+
T Consensus       149 ---~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  216 (250)
T TIGR03206       149 ---EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRL  216 (250)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCC
Confidence               11233456554444332       289999999999988742210     001112222222211         123


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|+++..++..+.. ..|+++++.++.
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       217 GQPDDLPGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             cCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            5679999999999887543 356899998764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.60  E-value=4.7e-15  Score=133.54  Aligned_cols=203  Identities=15%  Similarity=0.197  Sum_probs=129.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||+.++++|+++|++|++++|+.+..++..       ..+..  ..+..+.+|   .+++.++
T Consensus         9 ~~k~vlIt----Ga~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~i~~~~~~~~~~~~D~~~~~~~~~~   77 (255)
T PRK07523          9 TGRRALVT----GSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA-------ESLKGQGLSAHALAFDVTDHDAVRAA   77 (255)
T ss_pred             CCCEEEEE----CCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHHHhcCceEEEEEccCCCHHHHHHH
Confidence            46899999    99999999999999999999999999865433211       11111  123444444   6666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +...     ++|+|||+++.                    |+.++.++++++.    +.+.++||++||...+....   
T Consensus        78 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---  154 (255)
T PRK07523         78 IDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP---  154 (255)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC---
Confidence            6532     37999999983                    3345555666554    34667999999965432211   


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ....+..+|...+.+.+       .+|+++.++||+.+.++...... ...+...+....+         ...+..
T Consensus       155 ----~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  221 (255)
T PRK07523        155 ----GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGK  221 (255)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcC
Confidence                11223346666655543       34899999999999887532211 0111122222222         123567


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .+|+|++++.++.++.. .+|+++++.+|..++
T Consensus       222 ~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        222 VEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            99999999999986543 356899998886543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.2e-14  Score=130.62  Aligned_cols=200  Identities=17%  Similarity=0.166  Sum_probs=126.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++++|+||    ||+|+||++++++|+++|++|.++ .|+.+...+..       ..+.  ...+.++.+|   ++++.+
T Consensus         5 ~~~~ilIt----Gasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~i~~   73 (254)
T PRK12746          5 DGKVALVT----GASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI-------REIESNGGKAFLIEADLNSIDGVKK   73 (254)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCcEEEEEcCcCCHHHHHH
Confidence            35799999    999999999999999999999876 56543322110       0111  1134455555   566665


Q ss_pred             hhcC-----------CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          147 VVGG-----------VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       147 ~~~~-----------~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                      +++.           .++|+|||++|.                    |+.++.++++++...  +..+||++||..++..
T Consensus        74 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~  153 (254)
T PRK12746         74 LVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG  153 (254)
T ss_pred             HHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence            5553           248999999983                    455666677766542  2358999999877653


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..+       ...+..+|.+.+.+.+.       .++++++++||.++++..........+.......        ....
T Consensus       154 ~~~-------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~--------~~~~  218 (254)
T PRK12746        154 FTG-------SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS--------SVFG  218 (254)
T ss_pred             CCC-------CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc--------CCcC
Confidence            221       12244577777665432       3799999999999887532110000111111111        1112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .+++++|+++++..++.++.. ..|++|++.++
T Consensus       219 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        219 RIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            457899999999988887543 34689999876

>PRK06182 short chain dehydrogenase; Validated

Probab=99.60  E-value=8e-15  Score=133.48  Aligned_cols=197  Identities=17%  Similarity=0.141  Sum_probs=125.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++|+||    ||+|+||++++++|+++|++|++++|+.+..+++           ...+++++.+|   .+++.++++
T Consensus         2 ~~k~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-----------~~~~~~~~~~Dv~~~~~~~~~~~   66 (273)
T PRK06182          2 QKKVALVT----GASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-----------ASLGVHPLSLDVTDEASIKAAVD   66 (273)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HhCCCeEEEeeCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987544322           11235555555   666666665


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||++|.                    |+.+    ++.++..+++.+.+++|++||.+.+...   +  
T Consensus        67 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~---~--  141 (273)
T PRK06182         67 TIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT---P--  141 (273)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC---C--
Confidence            32     48999999983                    2222    5666777787787899999996532211   1  


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHh---CCCc--------ccCCCC
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---KRPV--------PIPGSG  262 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~  262 (349)
                        ....+..+|..++.+.       ...+++++++|||++..+.....     ...+..   +.+.        ..+...
T Consensus       142 --~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (273)
T PRK06182        142 --LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIA-----ADHLLKTSGNGAYAEQAQAVAASMRST  214 (273)
T ss_pred             --CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhh-----hhhhcccccccchHHHHHHHHHHHHHh
Confidence              0111344677766543       23489999999999987643110     000000   0000        000000


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      .....+.+.+|+|++++.++.....  ...|+++.+
T Consensus       215 ~~~~~~~~~~~vA~~i~~~~~~~~~--~~~~~~g~~  248 (273)
T PRK06182        215 YGSGRLSDPSVIADAISKAVTARRP--KTRYAVGFG  248 (273)
T ss_pred             hccccCCCHHHHHHHHHHHHhCCCC--CceeecCcc
Confidence            1123467899999999999987543  246777654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.59  E-value=4.3e-14  Score=116.38  Aligned_cols=191  Identities=18%  Similarity=0.231  Sum_probs=129.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |||.|+    ||+|.+|++|+++++++||+|++++|++.+....             +++..++.|   ++.+.+.+.++
T Consensus         1 mKIaiI----gAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~g~   63 (211)
T COG2910           1 MKIAII----GASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLAGH   63 (211)
T ss_pred             CeEEEE----ecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------ccceeecccccChhhhHhhhcCC
Confidence            689999    9999999999999999999999999998655321             245555555   66666778776


Q ss_pred             CccEEEeCCCCC--------hhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCCCCCCCCCCCC----hHH---HH
Q 018900          152 TFDVVLDNNGKN--------LDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAG----HVQ---VE  215 (349)
Q Consensus       152 ~~d~Vi~~a~~~--------~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~e~~~~~~~~~----k~~---~e  215 (349)
                        |+||..-+.-        ......+++..+..++.|++.++.++ .|-.....-  .+.+..|...    +..   .+
T Consensus        64 --DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rL--vD~p~fP~ey~~~A~~~ae~L~  139 (211)
T COG2910          64 --DAVISAFGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRL--VDTPDFPAEYKPEALAQAEFLD  139 (211)
T ss_pred             --ceEEEeccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCcee--ecCCCCchhHHHHHHHHHHHHH
Confidence              9999765532        23356688899999999999998765 232222111  1222222111    112   23


Q ss_pred             HHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          216 KYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       216 k~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                      .+-.+..++||.+-|..++-|+...+       ...-|+.....+..  --++|+..|.|-++++.++++...+ +.|.+
T Consensus       140 ~Lr~~~~l~WTfvSPaa~f~PGerTg-------~yrlggD~ll~n~~--G~SrIS~aDYAiA~lDe~E~~~h~r-qRftv  209 (211)
T COG2910         140 SLRAEKSLDWTFVSPAAFFEPGERTG-------NYRLGGDQLLVNAK--GESRISYADYAIAVLDELEKPQHIR-QRFTV  209 (211)
T ss_pred             HHhhccCcceEEeCcHHhcCCccccC-------ceEeccceEEEcCC--CceeeeHHHHHHHHHHHHhcccccc-eeeee
Confidence            34445589999999999999976543       12222222222211  1368999999999999999998765 66655


Q ss_pred             e
Q 018900          296 V  296 (349)
Q Consensus       296 ~  296 (349)
                      .
T Consensus       210 ~  210 (211)
T COG2910         210 A  210 (211)
T ss_pred             c
Confidence            3

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.2e-14  Score=128.19  Aligned_cols=197  Identities=15%  Similarity=0.145  Sum_probs=128.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++++||    ||+|++|+++++.|+++|++|++++|+.+...++...          .+.+++.+|   .+++.++++
T Consensus         8 ~~~~~lIt----Ga~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~   73 (245)
T PRK07060          8 SGKSVLVT----GASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE----------TGCEPLRLDVGDDAAIRAALA   73 (245)
T ss_pred             CCCEEEEe----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------hCCeEEEecCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999986543321110          123444444   566666666


Q ss_pred             CC-CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CcEEEEeccccccCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~g-v~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      .. ++|+|||+++.                    |+.+..++++++.+    .+ ..+||++||...+.....       
T Consensus        74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  146 (245)
T PRK07060         74 AAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD-------  146 (245)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC-------
Confidence            53 37999999983                    33455566665543    22 368999999765443211       


Q ss_pred             CCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          204 VVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ...+..+|..++.+++.       .+++++.+||+.++++.....+. ......+....         ....+++++|++
T Consensus       147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~a  217 (245)
T PRK07060        147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI---------PLGRFAEVDDVA  217 (245)
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC---------CCCCCCCHHHHH
Confidence            12234567776665543       37999999999998875321100 00111111111         113478999999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++++.++..+.. .+|+++++.+|.
T Consensus       218 ~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        218 APILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HHHHHHcCcccCCccCcEEeECCCc
Confidence            999999987643 456888887763

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.59  E-value=2.2e-14  Score=121.62  Aligned_cols=214  Identities=17%  Similarity=0.191  Sum_probs=154.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHH-----HHHhCC----CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAK-----ELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~-----~Ll~~g----~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~  142 (349)
                      .+.++.++-    +++|+|+.-|..     ++-+.+    |+|++++|.+...+       ..|+++...++..      
T Consensus        10 ~~sr~a~~~----~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-------itw~el~~~Gip~------   72 (315)
T KOG3019|consen   10 GKSRDAVSN----WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-------ITWPELDFPGIPI------   72 (315)
T ss_pred             CccccCCCC----ccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-------cccchhcCCCCce------
Confidence            345567777    999999987776     444444    89999999875443       2455555544431      


Q ss_pred             hHHhhhcCCCccEEEeCCCC--------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCC
Q 018900          143 EVGNVVGGVTFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +         ++.+++.++.                    .+..+..+.++.+++.  .+.+|++|...+|-+.+...++
T Consensus        73 s---------c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~  143 (315)
T KOG3019|consen   73 S---------CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYS  143 (315)
T ss_pred             e---------hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccc
Confidence            1         1223332221                    2456888999998886  4679999999999998877888


Q ss_pred             CCCCCCCCCChHHHHHHHH---------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                      |++...-   .--..+++.         ....+.+++|.|.|.|.+.+.-...+..-++-.|+|+   |+|+|.++|||+
T Consensus       144 e~~~~qg---fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv  217 (315)
T KOG3019|consen  144 EKIVHQG---FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL---GSGQQWFPWIHV  217 (315)
T ss_pred             cccccCC---hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC---CCCCeeeeeeeh
Confidence            8776542   111222221         2257899999999999887653222223345567774   889999999999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      +|++..+..+++++.-.  ++.|-..+++++..|+++.+.++++++..
T Consensus       218 ~DL~~li~~ale~~~v~--GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~  263 (315)
T KOG3019|consen  218 DDLVNLIYEALENPSVK--GVINGVAPNPVRNGEFCQQLGSALSRPSW  263 (315)
T ss_pred             HHHHHHHHHHHhcCCCC--ceecccCCCccchHHHHHHHHHHhCCCcc
Confidence            99999999999998774  59999999999999999999999998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.7e-14  Score=127.32  Aligned_cols=187  Identities=19%  Similarity=0.209  Sum_probs=121.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+|+||||    ||+|++|++++++|+++ ++|++++|+.+...++..       +  ..+++++.+|   .+++.++++
T Consensus         2 ~~~~vlVt----G~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~-------~--~~~~~~~~~D~~~~~~~~~~~~   67 (227)
T PRK08219          2 ERPTALIT----GASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA-------E--LPGATPFPVDLTDPEAIAAAVE   67 (227)
T ss_pred             CCCEEEEe----cCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH-------H--hccceEEecCCCCHHHHHHHHH
Confidence            46799999    99999999999999999 999999998643321110       0  1245566666   667777776


Q ss_pred             CC-CccEEEeCCCCC--------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGKN--------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~~--------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      .. ++|.|||+++..                    +.+    ++++++++++.+ +++|++||...++....       .
T Consensus        68 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~-------~  139 (227)
T PRK08219         68 QLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPG-------W  139 (227)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCC-------C
Confidence            54 489999999841                    122    455666666554 68999999766543221       1


Q ss_pred             CCCCCChHHHHHHHHhh-----C-CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          205 VKPDAGHVQVEKYISEN-----F-SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~~~-----~-~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      ..+..+|...+.+++..     + +++..++||.+.++...         .+.......     .....+++++|+++++
T Consensus       140 ~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~---------~~~~~~~~~-----~~~~~~~~~~dva~~~  205 (227)
T PRK08219        140 GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR---------GLVAQEGGE-----YDPERYLRPETVAKAV  205 (227)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh---------hhhhhhccc-----cCCCCCCCHHHHHHHH
Confidence            12334676666554432     4 78889998876554211         111111001     1123579999999999


Q ss_pred             HHHhcCCCccCCCEEEeeC
Q 018900          279 TLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~  297 (349)
                      +.+++.+..  +.++++.-
T Consensus       206 ~~~l~~~~~--~~~~~~~~  222 (227)
T PRK08219        206 RFAVDAPPD--AHITEVVV  222 (227)
T ss_pred             HHHHcCCCC--CccceEEE
Confidence            999988653  46777764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=1.1e-14  Score=130.60  Aligned_cols=202  Identities=13%  Similarity=0.144  Sum_probs=126.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++||||    ||+|+||++++++|+++|++|+++ .|+.+..+++...    ... ...++.++.+|   ++++..+++
T Consensus         4 ~~~vlIt----Ga~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   74 (250)
T PRK08063          4 GKVALVT----GSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEE----IEA-LGRKALAVKANVGDVEKIKEMFA   74 (250)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHh-cCCeEEEEEcCCCCHHHHHHHHH
Confidence            4789999    999999999999999999998774 6665432211100    000 01234455555   666666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +.     ++|+|||+++.                    |+.++.++++++    ++.+.++||++||...+....     
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----  149 (250)
T PRK08063         75 QIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE-----  149 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----
Confidence            43     48999999983                    333444454444    445667999999976543211     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                        ....+..+|.+++.+.+.       .++++++++|+.+..+..... -...+........+         ...+++.+
T Consensus       150 --~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  218 (250)
T PRK08063        150 --NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPE  218 (250)
T ss_pred             --CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHH
Confidence              111234578877776543       478999999999976542210 00111111111111         12368999


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      |+|++++.++.++.. ..|+.+++.++..
T Consensus       219 dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        219 DVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            999999999987643 3468899888764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=6.5e-14  Score=126.04  Aligned_cols=203  Identities=12%  Similarity=0.139  Sum_probs=125.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      |+|+||||    ||+|+||++++++|.++|++|++++|..+.. .+...    .+.. ...++.++.+|   ++++.+++
T Consensus         1 ~~k~vlIt----G~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~   71 (256)
T PRK12745          1 MRPVALVT----GGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQ----ELRA-LGVEVIFFPADVADLSAHEAML   71 (256)
T ss_pred             CCcEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHH----HHHh-cCCceEEEEecCCCHHHHHHHH
Confidence            45789999    9999999999999999999999999864321 11000    0000 01234555565   55555554


Q ss_pred             cCC-----CccEEEeCCCC----------------------ChhhHHHHHHHHHh----CC------CcEEEEecccccc
Q 018900          149 GGV-----TFDVVLDNNGK----------------------NLDAVRPVADWAKS----SG------VKQFLFISSAGIY  191 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~a~~----~g------v~~~i~~Ss~~vy  191 (349)
                      +..     ++|+|||++|.                      |+.++.++++++..    ..      ..+||++||...+
T Consensus        72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  151 (256)
T PRK12745         72 DAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI  151 (256)
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence            432     48999999873                      34455566665532    11      5679999996653


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      ....+       ...+..+|..++.+++.       ++++++++|||.+.++..... ...+.. .......+       
T Consensus       152 ~~~~~-------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~-~~~~~~~~-------  215 (256)
T PRK12745        152 MVSPN-------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV-TAKYDA-LIAKGLVP-------  215 (256)
T ss_pred             cCCCC-------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc-chhHHh-hhhhcCCC-------
Confidence            32211       11234467776655432       489999999999988654321 111211 11111111       


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ...+.+.+|+++++..++..... .+|++|++.++..
T Consensus       216 ~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        216 MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            12466899999999988876533 3568999988754

>PRK06128 oxidoreductase; Provisional

Probab=99.56  E-value=3.1e-14  Score=131.51  Aligned_cols=205  Identities=14%  Similarity=0.166  Sum_probs=130.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|+++.|..+.... ..    ....+.  ...+.++.+|   .+++++
T Consensus        53 l~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~Dl~~~~~v~~  123 (300)
T PRK06128         53 LQGRKALIT----GADSGIGRATAIAFAREGADIALNYLPEEEQDA-AE----VVQLIQAEGRKAVALPGDLKDEAFCRQ  123 (300)
T ss_pred             cCCCEEEEe----cCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHH-HH----HHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence            346899999    999999999999999999999888775432110 00    000111  1123455555   555555


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++...     ++|+|||+++.                     |+.++.++++++...  .-.+||++||...|.....  
T Consensus       124 ~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  201 (300)
T PRK06128        124 LVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT--  201 (300)
T ss_pred             HHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC--
Confidence            55432     48999999983                     345566777776542  2258999999887754321  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ...+..+|.+++.+.+.       .|+++.+++||.+.++..... .....+..+....++         ..+.+
T Consensus       202 -----~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  267 (300)
T PRK06128        202 -----LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPM---------KRPGQ  267 (300)
T ss_pred             -----chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCC---------CCCcC
Confidence                 11234567776655443       389999999999998864321 112222222222221         23568


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+|++.+++.++.+... ..|++|++.+|..+
T Consensus       268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        268 PVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            89999999998876543 35689999988644

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.56  E-value=5.9e-14  Score=129.03  Aligned_cols=202  Identities=13%  Similarity=0.147  Sum_probs=130.3

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCccccee--cCCCeEEEcC---hhhH
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEV  144 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l  144 (349)
                      ..++|+||||    ||+|+||++++++|+++|++|++++|+.+.. ....       ..+.  ...+.++.+|   .+++
T Consensus        43 ~~~~k~iLIt----GasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~  111 (290)
T PRK06701         43 KLKGKVALIT----GGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK-------QRVEKEGVKCLLIPGDVSDEAFC  111 (290)
T ss_pred             CCCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-------HHHHhcCCeEEEEEccCCCHHHH
Confidence            3456899999    9999999999999999999999999875321 1110       0111  1234455565   5555


Q ss_pred             HhhhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~  196 (349)
                      .++++..     ++|+|||+++.                     |+.+..++++++...  ...+||++||...|.....
T Consensus       112 ~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~  191 (290)
T PRK06701        112 KDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET  191 (290)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC
Confidence            5555432     48999999982                     345666777766542  2358999999877654321


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...+..+|.+++.+++.       .++++..++||.++.+.................         .....+.
T Consensus       192 -------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~---------~~~~~~~  255 (290)
T PRK06701        192 -------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN---------TPMQRPG  255 (290)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhc---------CCcCCCc
Confidence                   11234567666555433       389999999999988754332111222222111         1123467


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+|++++.++.+... ..|.++++.++.
T Consensus       256 ~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        256 QPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            899999999999987643 356888888764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.9e-14  Score=129.65  Aligned_cols=204  Identities=15%  Similarity=0.154  Sum_probs=125.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+++..+++.       .++.  ...+..+.+|   .+++..+
T Consensus         4 ~~k~vlIt----Ga~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          4 KGKVVVVS----GVGPGLGRTLAVRAARAGADVVLAARTAERLDEVA-------AEIDDLGRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHHHHhCCceEEEecCCCCHHHHHHH
Confidence            45789999    99999999999999999999999999875433221       1111  1234455555   5566555


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +...     ++|+|||+++.                     |+.+...+++++...   ...+||++||...+.+..+  
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--  150 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK--  150 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC--
Confidence            5432     48999999973                     234455666665432   1258999999765432211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc---cc---CCCCCcc
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV---PI---PGSGMQF  265 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~  265 (349)
                           ...+..+|..++.+++.       .++++.++|||.++++....     ++.....+...   .+   .......
T Consensus       151 -----~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK07890        151 -----YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG-----YFRHQAGKYGVTVEQIYAETAANSDL  220 (258)
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH-----HhhhcccccCCCHHHHHHHHhhcCCc
Confidence                 12234567776665543       37999999999999985321     11111100000   00   0001111


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      ..+.+++|++++++.++.... ...|+++.+.+++
T Consensus       221 ~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        221 KRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             cccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            236789999999999987543 2345777777664

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.2e-14  Score=127.43  Aligned_cols=199  Identities=15%  Similarity=0.135  Sum_probs=123.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC-CcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      |++.||||    ||+|+||.+++++|+++|+.|++..+..+ ...++.       ..+.  ...+.++.+|   .+++.+
T Consensus         1 ~~~~~lVt----G~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~   69 (248)
T PRK06123          1 MRKVMIIT----GASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVV-------QAIRRQGGEALAVAADVADEADVLR   69 (248)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHH-------HHHHhCCCcEEEEEeccCCHHHHHH
Confidence            35689999    99999999999999999999887764432 111110       0111  1123344444   566666


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC----C---CcEEEEecccc-ccC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS----G---VKQFLFISSAG-IYK  192 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~----g---v~~~i~~Ss~~-vy~  192 (349)
                      ++...     ++|+|||+++.                     |+.++.++++++...    +   -.+||++||.. +++
T Consensus        70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  149 (248)
T PRK06123         70 LFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG  149 (248)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC
Confidence            55432     47999999983                     233445555554321    1   23699999964 444


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ....       ...+..+|...+.+++.       .+++++++||++++++.........++..+....++..       
T Consensus       150 ~~~~-------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~-------  215 (248)
T PRK06123        150 SPGE-------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR-------  215 (248)
T ss_pred             CCCC-------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC-------
Confidence            3211       11255678877765543       28999999999999985432222223333333333221       


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                        +.+++|++++++.++.+... ..|++|++.++
T Consensus       216 --~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        216 --GGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             --CcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence              23689999999998886543 35689999875

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.56  E-value=3.9e-14  Score=126.64  Aligned_cols=198  Identities=14%  Similarity=0.143  Sum_probs=119.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      |++||||    ||+|+||++++++|+++|++|+++ .|+.+...+..       .++.  ...+..+.+|   ++++.++
T Consensus         1 ~~~~lIt----Ga~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~i~~~   69 (247)
T PRK09730          1 MAIALVT----GGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVV-------NLITQAGGKAFVLQADISDENQVVAM   69 (247)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHhCCCeEEEEEccCCCHHHHHHH
Confidence            4689999    999999999999999999999875 45443222111       0111  1123445555   5666665


Q ss_pred             hcCC-----CccEEEeCCCCC---------------------hhhHHHHHHH----HHhC---CCcEEEEeccccc-cCC
Q 018900          148 VGGV-----TFDVVLDNNGKN---------------------LDAVRPVADW----AKSS---GVKQFLFISSAGI-YKP  193 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~---------------------~~~~~~ll~~----a~~~---gv~~~i~~Ss~~v-y~~  193 (349)
                      ++..     ++|+|||+++..                     +.++.+++++    +.+.   +..+||++||... ++.
T Consensus        70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~  149 (247)
T PRK09730         70 FTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA  149 (247)
T ss_pred             HHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC
Confidence            5532     479999999842                     2223233332    2222   1357999999754 332


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ....+..+|...+.+++.       .+++++++||+.++++.........+...+....+..         
T Consensus       150 ~~-------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------  213 (247)
T PRK09730        150 PG-------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------  213 (247)
T ss_pred             CC-------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------
Confidence            21       111244567776655432       3899999999999998643322222233333332221         


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ...+.+|+++.++.++.++.. ..|+.|++.++
T Consensus       214 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        214 RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            123689999999999876532 34578877764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.55  E-value=8.9e-14  Score=124.13  Aligned_cols=198  Identities=18%  Similarity=0.253  Sum_probs=123.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccce--ecCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~~  146 (349)
                      .+++||||    ||+|++|+++++.|+++|++|+++.|+.+.. ..+.       .++  ....+.++.+|   .+++.+
T Consensus         4 ~~~~vlIt----G~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (248)
T PRK05557          4 EGKVALVT----GASRGIGRAIAERLAAQGANVVINYASSEAGAEALV-------AEIGALGGKALAVQGDVSDAESVER   72 (248)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH-------HHHHhcCCceEEEEcCCCCHHHHHH
Confidence            35789999    9999999999999999999998988875421 1100       011  01234455555   555555


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCcEEEEeccc-cccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSA-GIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~-~vy~~~~~  196 (349)
                      +++..     ++|+|||+++.                    |+.++.++++++.    +.+.++||++||. ++++....
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~  152 (248)
T PRK05557         73 AVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ  152 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC
Confidence            54431     47999999983                    3444555655554    4466789999985 34443221


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                              ..+..+|...+.+++       ..+++++++|||.+..+.... ....+........+.         ..+.
T Consensus       153 --------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~  214 (248)
T PRK05557        153 --------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA-LPEDVKEAILAQIPL---------GRLG  214 (248)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc-cChHHHHHHHhcCCC---------CCCc
Confidence                    112345665554443       238899999999875543222 122223333222221         2356


Q ss_pred             eHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      +.+|+++++..++.... ..+|+.|++.++.
T Consensus       215 ~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        215 QPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             CHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            88999999988887633 2356899998763

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.1e-13  Score=124.45  Aligned_cols=198  Identities=15%  Similarity=0.158  Sum_probs=125.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+++||||    ||+|+||.+++++|+++|++|++++|+.+.....        .++....+..+.+|   ++++.+++.
T Consensus        14 ~~k~vlIt----Gas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (255)
T PRK06841         14 SGKVAVVT----GGASGIGHAIAELFAAKGARVALLDRSEDVAEVA--------AQLLGGNAKGLVCDVSDSQSVEAAVA   81 (255)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--------HHhhCCceEEEEecCCCHHHHHHHHH
Confidence            46799999    9999999999999999999999999976422110        11111233345555   555555554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCcEEEEeccccc-cCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGI-YKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~v-y~~~~~~~~  199 (349)
                      ..     ++|+|||++|.                    |+.+..++++++.    +.+.++||++||.+. ++...    
T Consensus        82 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  157 (255)
T PRK06841         82 AVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER----  157 (255)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC----
Confidence            32     47999999983                    3455566666553    345679999999653 33221    


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...+..+|...+.+.+.       .++++..++||.+..+.............+....+         ...+.+.+
T Consensus       158 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  224 (255)
T PRK06841        158 ----HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP---------AGRFAYPE  224 (255)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC---------CCCCcCHH
Confidence                11233466665544332       37999999999987764322111111111221111         12467899


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |++++++.++.++.. .+|+++.+.+|.
T Consensus       225 ~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        225 EIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HHHHHHHHHcCccccCccCCEEEECCCc
Confidence            999999999987644 456888888775

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.55  E-value=5.3e-13  Score=118.44  Aligned_cols=192  Identities=14%  Similarity=0.150  Sum_probs=122.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc----
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG----  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~----  149 (349)
                      .++||||    ||+|++|++++++|+++|++|++++|+.+...     .    .+    -++.+..|.+++.+++.    
T Consensus         3 ~k~vlIt----G~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----~----~~----~~~~D~~~~~~~~~~~~~~~~   65 (234)
T PRK07577          3 SRTVLVT----GATKGIGLALSLRLANLGHQVIGIARSAIDDF-----P----GE----LFACDLADIEQTAATLAQINE   65 (234)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEeCCccccc-----C----ce----EEEeeCCCHHHHHHHHHHHHH
Confidence            5789999    99999999999999999999999999874311     0    00    12233344555554443    


Q ss_pred             CCCccEEEeCCCCC--------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          150 GVTFDVVLDNNGKN--------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~--------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      ..++|+|||+++..                    +.+    .+.++.++++.+..+||++||...|+....        .
T Consensus        66 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------~  137 (234)
T PRK07577         66 IHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDR--------T  137 (234)
T ss_pred             hCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCc--------h
Confidence            23579999999841                    122    344556667777889999999877654321        1


Q ss_pred             CCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          206 KPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       206 ~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      .+..+|...+.+.+.       .+++++++|||.+..+.....  ........+....+.         ......+|+|+
T Consensus       138 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~  208 (234)
T PRK07577        138 SYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM---------RRLGTPEEVAA  208 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC---------CCCcCHHHHHH
Confidence            233466665554432       489999999999877643211  001111122221111         11346799999


Q ss_pred             HHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          277 MLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++.++.++.. .+|+.+.+.++.
T Consensus       209 ~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        209 AIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHhCcccCCccceEEEecCCc
Confidence            99999987633 346888887664

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.55  E-value=7.9e-14  Score=127.24  Aligned_cols=217  Identities=16%  Similarity=0.126  Sum_probs=131.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|+||++++++|.++|++|++++|+.+..++..       .++..  ..+.++.+|   .+++.++
T Consensus         5 ~~k~vlVT----Gas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   73 (275)
T PRK05876          5 PGRGAVIT----GGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV-------NHLRAEGFDVHGVMCDVRHREEVTHL   73 (275)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            56789999    99999999999999999999999998865443211       11111  123444555   5666655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~  197 (349)
                      +...     ++|+|||++|.                    |+.+..++++++    .+.+ ..++|++||...+.+... 
T Consensus        74 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~-  152 (275)
T PRK05876         74 ADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG-  152 (275)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC-
Confidence            5432     47999999983                    334555555554    3444 468999999765543211 


Q ss_pred             CCCCCCCCCCCCChHH----HHHHHHh---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQ----VEKYISE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~----~ek~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...+..+|..    .+.+..+   .|+++++++||.+.++..... ................++......++++
T Consensus       153 ------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (275)
T PRK05876        153 ------LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ERIRGAACAQSSTTGSPGPLPLQDDNLG  225 (275)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hhhcCccccccccccccccccccccCCC
Confidence                  1123345655    3333333   389999999999877643211 0000000001111122333334467899


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      ++|+|+.++.++++.     +.|.+.++  .....+.+...+...
T Consensus       226 ~~dva~~~~~ai~~~-----~~~~~~~~--~~~~~~~~~~~~~~~  263 (275)
T PRK05876        226 VDDIAQLTADAILAN-----RLYVLPHA--ASRASIRRRFERIDR  263 (275)
T ss_pred             HHHHHHHHHHHHHcC-----CeEEecCh--hhHHHHHHHHHHHHH
Confidence            999999999999864     44555433  455666666666543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.55  E-value=6.7e-14  Score=126.32  Aligned_cols=203  Identities=13%  Similarity=0.176  Sum_probs=129.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||.++++.|+++|++|++++|+.+..+...       .++.  ...+.++.+|   ++++.++
T Consensus        11 ~~k~ilIt----Ga~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~i~~~~~~~~~~~~Dl~d~~~i~~~   79 (259)
T PRK08213         11 SGKTALVT----GGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA-------AHLEALGIDALWIAADVADEADIERL   79 (259)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            46899999    99999999999999999999999999764332211       0111  1234455565   5555444


Q ss_pred             hcC-----CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC-----CCcEEEEeccccccCCCCCC
Q 018900          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS-----GVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~-----gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +..     .++|+|||+++.                    |+.++.++++++...     +.++||++||...+......
T Consensus        80 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~  159 (259)
T PRK08213         80 AEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE  159 (259)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc
Confidence            432     247999999983                    445677778766443     56799999997554332111


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                       .  .....+..+|..++.+++.       .++++.+++|+.+-.+.... .+..+.+.+..+.++..+         ..
T Consensus       160 -~--~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~---------~~  226 (259)
T PRK08213        160 -V--MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG-TLERLGEDLLAHTPLGRL---------GD  226 (259)
T ss_pred             -c--cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh-hhHHHHHHHHhcCCCCCC---------cC
Confidence             0  0112233467666665543       27889999999886654322 233344444444433322         35


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|++..+..++..... .+|+.+++.++.
T Consensus       227 ~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        227 DEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            78999999888876644 466888887763

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.55  E-value=1.6e-13  Score=123.25  Aligned_cols=201  Identities=12%  Similarity=0.056  Sum_probs=122.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .++++|||    ||+|+||+.++++|+++|++|++++|+.  ...            ....+..+.+|   .+++.++++
T Consensus         7 ~~k~vlIt----Gas~~iG~~la~~l~~~G~~v~~~~~~~--~~~------------~~~~~~~~~~D~~~~~~~~~~~~   68 (252)
T PRK08220          7 SGKTVWVT----GAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ------------EDYPFATFVLDVSDAAAVAQVCQ   68 (252)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecch--hhh------------cCCceEEEEecCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999976  100            01123444444   666666654


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+++.                    |+.+...+++++    ++.+..+||++||........     
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----  143 (252)
T PRK08220         69 RLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI-----  143 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC-----
Confidence            32     37999999983                    233444455544    445556899999965432211     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHH-HHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDR-IVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                        ....+..+|...+.+.+.       +++++.+++||.++++............. ...+. ............+++++
T Consensus       144 --~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  220 (252)
T PRK08220        144 --GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF-PEQFKLGIPLGKIARPQ  220 (252)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH-HHHHhhcCCCcccCCHH
Confidence              112234567666555432       48999999999998875321100000000 00000 00000011123578999


Q ss_pred             HHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      |+|++++.++.+.. ...|+++.+.+|.
T Consensus       221 dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        221 EIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             HHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            99999999997653 3445777777764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.55  E-value=6e-14  Score=125.65  Aligned_cols=202  Identities=13%  Similarity=0.131  Sum_probs=127.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+++||||    ||+|+||++++++|+++|++|++++|+++........    +.. ...++.++.+|   .+++.+++.
T Consensus         6 ~~~~vlIt----Ga~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~~   76 (250)
T PRK12939          6 AGKRALVT----GAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAA----LEA-AGGRAHAIAADLADPASVQRFFD   76 (250)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEccCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999886543322110    000 01234555555   566655554


Q ss_pred             C-----CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      .     .++|+|||+++.                    |+.+..++++++    ++.+..+||++||...+.....    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  152 (250)
T PRK12939         77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK----  152 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC----
Confidence            3     248999999984                    334455555554    3334569999999654432211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|...+.+++.       .++++..++||.+..+.........+........+         ...+++++|
T Consensus       153 ---~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d  220 (250)
T PRK12939        153 ---LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRA---------LERLQVPDD  220 (250)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCC---------CCCCCCHHH
Confidence               11233456666655543       37899999999887664322111122222222221         234678999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++++++.++..+.. .+|+.+.+.++.
T Consensus       221 va~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        221 VAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHHHHHhCccccCccCcEEEECCCc
Confidence            99999999987643 456889888874

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.54  E-value=8e-14  Score=127.26  Aligned_cols=143  Identities=20%  Similarity=0.198  Sum_probs=101.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|.++|++|++++|+.+....+           ...+++++.+|   .+++..+++
T Consensus         3 ~~k~vlIt----GasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l-----------~~~~~~~~~~Dl~d~~~~~~~~~   67 (277)
T PRK05993          3 MKRSILIT----GCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL-----------EAEGLEAFQLDYAEPESIAALVA   67 (277)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----------HHCCceEEEccCCCHHHHHHHHH
Confidence            46789999    9999999999999999999999999987544322           12245556666   555555544


Q ss_pred             CC------CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV------TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~------~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..      ++|+|||++|.                    |+.+    ++++++.+++.+..+||++||...+....    
T Consensus        68 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----  143 (277)
T PRK05993         68 QVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMK----  143 (277)
T ss_pred             HHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCC----
Confidence            32      48999999983                    2233    66788888888888999999965432211    


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCC
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSG  237 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~  237 (349)
                         ....+..+|.+++.+.+       ..|+++++++||.+-.+.
T Consensus       144 ---~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        144 ---YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             ---ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence               11223456777776543       348999999999886653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=5e-14  Score=126.40  Aligned_cols=200  Identities=15%  Similarity=0.130  Sum_probs=119.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|+++|++|++..|.... ....       ...+..  ..+..+.+|   .+++..
T Consensus         5 ~~~~vlit----Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   73 (252)
T PRK06077          5 KDKVVVVT----GSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNET-------LKMVKENGGEGIGVLADVSTREGCET   73 (252)
T ss_pred             CCcEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHH-------HHHHHHcCCeeEEEEeccCCHHHHHH
Confidence            35799999    999999999999999999999887764321 1100       001110  122334444   455544


Q ss_pred             hhcC-----CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCC
Q 018900          147 VVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       147 ~~~~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +++.     .++|+|||++|.                    |+.+..++++++.+.  ...+||++||...|....+   
T Consensus        74 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  150 (252)
T PRK06077         74 LAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG---  150 (252)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC---
Confidence            4432     147999999983                    233445555555432  2358999999876643221   


Q ss_pred             CCCCCCCCCCChHHHHHHHH----hh--CCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----EN--FSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~~--~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...+..+|...+.+.+    +.  ++.+.+++||.+.++.....  ..........+.  .      .....++++
T Consensus       151 ----~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~  218 (252)
T PRK06077        151 ----LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK--F------TLMGKILDP  218 (252)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh--c------CcCCCCCCH
Confidence                1122335655554443    22  68899999999877642110  000000111110  0      112357999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      +|+|++++.+++.+.. .|++|++.+++
T Consensus       219 ~dva~~~~~~~~~~~~-~g~~~~i~~g~  245 (252)
T PRK06077        219 EEVAEFVAAILKIESI-TGQVFVLDSGE  245 (252)
T ss_pred             HHHHHHHHHHhCcccc-CCCeEEecCCe
Confidence            9999999999986543 35899999885

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.53  E-value=7.4e-14  Score=126.82  Aligned_cols=192  Identities=19%  Similarity=0.159  Sum_probs=120.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +++|+||    ||+|+||++++++|+++|++|++++|+.+.....             .+++++.+|   +++++++++.
T Consensus         4 ~~~vlVt----Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~   66 (270)
T PRK06179          4 SKVALVT----GASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-------------PGVELLELDVTDDASVQAAVDE   66 (270)
T ss_pred             CCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-------------CCCeeEEeecCCHHHHHHHHHH
Confidence            4689999    9999999999999999999999999986543211             134455554   6677776654


Q ss_pred             C-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      .     ++|+|||++|.                    |+.++.++++    .+++.+.++||++||...+.....     
T Consensus        67 ~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  141 (270)
T PRK06179         67 VIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY-----  141 (270)
T ss_pred             HHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC-----
Confidence            3     47999999984                    2334444444    467778889999999654432111     


Q ss_pred             CCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          202 GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                        ...+..+|..++.+.+       +.|++++++|||++.++.....     .+..+ ... .........  .......
T Consensus       142 --~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~--~~~~~~~  215 (270)
T PRK06179        142 --MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRE-RAVVSKAVA--KAVKKAD  215 (270)
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHH-HHHHHHHHH--hccccCC
Confidence              1123346766665543       3489999999999887643221     00000 000 000000000  0011235


Q ss_pred             eHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          270 HVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                      ..+|+++.++.++..+..  +..|..
T Consensus       216 ~~~~va~~~~~~~~~~~~--~~~~~~  239 (270)
T PRK06179        216 APEVVADTVVKAALGPWP--KMRYTA  239 (270)
T ss_pred             CHHHHHHHHHHHHcCCCC--CeeEec
Confidence            789999999999988654  245544

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.53  E-value=5.5e-14  Score=126.55  Aligned_cols=194  Identities=15%  Similarity=0.054  Sum_probs=115.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+++||||    ||+|+||++++++|+++|++|++++|+.+...++....     .....++.++.+|   ++++..++.
T Consensus         1 m~~~vlVt----Gasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~   71 (257)
T PRK09291          1 MSKTILIT----GAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEA-----ARRGLALRVEKLDLTDAIDRAQAAE   71 (257)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----HhcCCcceEEEeeCCCHHHHHHHhc
Confidence            46789999    99999999999999999999999999764332211000     0001234455555   666776665


Q ss_pred             CCCccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          150 GVTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      . ++|+|||+++.                    |+.    .+++++..+++.+.++||++||...+...   +    ...
T Consensus        72 ~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---~----~~~  143 (257)
T PRK09291         72 W-DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---P----FTG  143 (257)
T ss_pred             C-CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---C----Ccc
Confidence            3 58999999983                    222    23455666677777899999996432211   1    111


Q ss_pred             CCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHh-CCC-cccCCCCCcceeeeeHHHHHH
Q 018900          206 KPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-KRP-VPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       206 ~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      .+..+|..+|.+.+       ..|++++++|||.+..+.... ....+ ..... ... +.. .+......+++.+|+++
T Consensus       144 ~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  220 (257)
T PRK09291        144 AYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT-MAETP-KRWYDPARNFTDP-EDLAFPLEQFDPQEMID  220 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh-hhhhh-hhhcchhhHHHhh-hhhhccccCCCHHHHHH
Confidence            23446777765443       348999999999874332111 11101 00000 000 110 01112234578899999


Q ss_pred             HHHHHhcCCC
Q 018900          277 MLTLAVENPE  286 (349)
Q Consensus       277 ~~~~~~~~~~  286 (349)
                      .++.++..+.
T Consensus       221 ~~~~~l~~~~  230 (257)
T PRK09291        221 AMVEVIPADT  230 (257)
T ss_pred             HHHHHhcCCC
Confidence            9998887653

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.52  E-value=1e-13  Score=124.15  Aligned_cols=199  Identities=16%  Similarity=0.147  Sum_probs=124.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      +++++|||    ||+|+||++++++|+++|++|+++.+.. +..+++.       .++..  .++.++.+|   .+++.+
T Consensus         5 ~~~~~lIt----G~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~   73 (247)
T PRK12935          5 NGKVAIVT----GGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLV-------NELGKEGHDVYAVQADVSKVEDANR   73 (247)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHH-------HHHHhcCCeEEEEECCCCCHHHHHH
Confidence            46899999    9999999999999999999998766533 2221110       11111  134455555   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     .+|+|||+++.                    |+.++..+++++.    +.+..+||++||...+....  
T Consensus        74 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  151 (247)
T PRK12935         74 LVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF--  151 (247)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC--
Confidence            55542     47999999983                    3445555566554    34456999999954322111  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ....+..+|.+.+.+++.       .++++++++||.+.++.... ...........+.         ....+++
T Consensus       152 -----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~  216 (247)
T PRK12935        152 -----GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEEVRQKIVAKI---------PKKRFGQ  216 (247)
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHHHHHHHHHhC---------CCCCCcC
Confidence                 112234567765554432       28999999999987654221 1111111221111         2245789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      ++|++++++.+++......|+.|++.++.
T Consensus       217 ~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        217 ADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            99999999999976543456999999874

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.52  E-value=1.1e-13  Score=124.16  Aligned_cols=185  Identities=16%  Similarity=0.119  Sum_probs=115.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+|+||    ||+|++|.+++++|+++|++|++++|+++....+..       . ...++.++.+|   .+++.++++..
T Consensus         1 ~~vlIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~-~~~~~~~~~~Dl~~~~~i~~~~~~~   68 (248)
T PRK10538          1 MIVLVT----GATAGFGECITRRFIQQGHKVIATGRRQERLQELKD-------E-LGDNLYIAQLDVRNRAAIEEMLASL   68 (248)
T ss_pred             CEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------H-hccceEEEEecCCCHHHHHHHHHHH
Confidence            579999    999999999999999999999999998754332111       0 11245555565   55555554421


Q ss_pred             -----CccEEEeCCCCC---------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          152 -----TFDVVLDNNGKN---------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       152 -----~~d~Vi~~a~~~---------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                           ++|.|||++|..                     +.+    ++.++.++++.+.++||++||...+....      
T Consensus        69 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  142 (248)
T PRK10538         69 PAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA------  142 (248)
T ss_pred             HHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCC------
Confidence                 479999999741                     222    45566666777778999999965432111      


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                       ....+..+|...+.+.+.       .++.+.+++||.+.++......+.......  .   ..+ +   ...++..+|+
T Consensus       143 -~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~---~~~-~---~~~~~~~~dv  212 (248)
T PRK10538        143 -GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--E---KTY-Q---NTVALTPEDV  212 (248)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH--H---hhc-c---ccCCCCHHHH
Confidence             111234467666655433       278999999999976542210000000000  0   001 0   1235789999


Q ss_pred             HHHHHHHhcCCCc
Q 018900          275 SSMLTLAVENPEA  287 (349)
Q Consensus       275 a~~~~~~~~~~~~  287 (349)
                      |++++.++..+..
T Consensus       213 A~~~~~l~~~~~~  225 (248)
T PRK10538        213 SEAVWWVATLPAH  225 (248)
T ss_pred             HHHHHHHhcCCCc
Confidence            9999999986643

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.52  E-value=2.3e-13  Score=121.91  Aligned_cols=197  Identities=14%  Similarity=0.117  Sum_probs=123.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+...       ++ ...+.++.+|   .+++..+++
T Consensus         5 ~~k~vlIt----Gasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~   72 (249)
T PRK06500          5 QGKTALIT----GGTSGIGLETARQFLAEGARVAITGRDPASLEAARA-------EL-GESALVIRADAGDVAAQKALAQ   72 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH-------Hh-CCceEEEEecCCCHHHHHHHHH
Confidence            46799999    999999999999999999999999997643322110       11 1133445555   444443333


Q ss_pred             C-----CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEecc-ccccCCCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISS-AGIYKPADEPPHVE  201 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss-~~vy~~~~~~~~~e  201 (349)
                      .     .++|+|||+++.                    |+.++.++++++...  ...++|++|| .+.|+....     
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~-----  147 (249)
T PRK06500         73 ALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNS-----  147 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCc-----
Confidence            2     147999999983                    355677778877531  2346777776 445553221     


Q ss_pred             CCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCC-----CCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          202 GDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                         ..+..+|...+.+++    +   .++++.++|||.++++...     ......+.+.+....++.         -+.
T Consensus       148 ---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  215 (249)
T PRK06500        148 ---SVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFG  215 (249)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCc
Confidence               223346777766663    3   2899999999999987421     111222333333332221         134


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +.+|++++++.++.++.. ..|..+.+.++
T Consensus       216 ~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        216 TPEEIAKAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             CHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            789999999999876543 33466666665

>PRK08324 short chain dehydrogenase; Validated

Probab=99.52  E-value=8.7e-14  Score=142.14  Aligned_cols=208  Identities=18%  Similarity=0.168  Sum_probs=131.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~  148 (349)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+.......       ++.. .++.++.+|   .+++.+++
T Consensus       421 ~gk~vLVT----GasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~-------~l~~~~~v~~v~~Dvtd~~~v~~~~  489 (681)
T PRK08324        421 AGKVALVT----GAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAA-------ELGGPDRALGVACDVTDEAAVQAAF  489 (681)
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-------HHhccCcEEEEEecCCCHHHHHHHH
Confidence            46899999    999999999999999999999999998754332111       1100 134455555   55565555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCC-cEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGV-KQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv-~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|+|||++|.                    |+.+..++++    .+++.+. .+||++||...+....+  
T Consensus       490 ~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--  567 (681)
T PRK08324        490 EEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--  567 (681)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC--
Confidence            432     48999999993                    3445555644    4455554 69999999754332111  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCcee-eCCCCCCchHHHHHHH-HhCCCc----ccCCCCCcc
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMI-GSGNNKDCEEWFFDRI-VRKRPV----PIPGSGMQF  265 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~  265 (349)
                           ...+..+|...+.+++..       ++++.+++|+.+| +++......  ...+. ..+...    ..+..+...
T Consensus       568 -----~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~l  640 (681)
T PRK08324        568 -----FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEW--IEARAAAYGLSEEELEEFYRARNLL  640 (681)
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchh--hhhhhhhccCChHHHHHHHHhcCCc
Confidence                 112334566666655432       6899999999998 554322110  01111 111111    123444455


Q ss_pred             eeeeeHHHHHHHHHHHhcCC-CccCCCEEEeeCCCc
Q 018900          266 TNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRA  300 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~-~~~~~~~~~i~~~~~  300 (349)
                      ..+++.+|+|++++.++... ....|++|++.+|..
T Consensus       641 ~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        641 KREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             CCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            67899999999999998532 334468999998864

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.52  E-value=2.5e-13  Score=121.22  Aligned_cols=203  Identities=16%  Similarity=0.196  Sum_probs=126.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      |+++||||    ||+|++|++++++|.++|++|++++|+.+. ..++...    .. .....+.++.+|   .+++.+++
T Consensus         1 ~~k~vlIt----G~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~v~~~~   71 (245)
T PRK12824          1 MKKIALVT----GAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEE----YG-FTEDQVRLKELDVTDTEECAEAL   71 (245)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH----hh-ccCCeEEEEEcCCCCHHHHHHHH
Confidence            35689999    999999999999999999999999998531 1110000    00 011235566666   45555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+++.                    |+.+..+    +++.+++.+..+||++||...+.....   
T Consensus        72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~---  148 (245)
T PRK12824         72 AEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG---  148 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC---
Confidence            432     38999999983                    2333333    456667667789999999765543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...+..+|.+++.+.+       +.++++.+++|+.+.++..... .......+....+.         ..+...+
T Consensus       149 ----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~  214 (245)
T PRK12824        149 ----QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM-GPEVLQSIVNQIPM---------KRLGTPE  214 (245)
T ss_pred             ----ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc-CHHHHHHHHhcCCC---------CCCCCHH
Confidence                1123345655444333       3379999999999987643321 11222222222221         2245689


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      |+++++..++..... ..|+++++.+++.+
T Consensus       215 ~va~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        215 EIAAAVAFLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            999999888865432 45689999988643

>PRK08017 oxidoreductase; Provisional

Probab=99.52  E-value=1.5e-13  Score=123.64  Aligned_cols=184  Identities=18%  Similarity=0.139  Sum_probs=116.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+++||||    ||+|+||+++++.|+++|++|++++|+.+..+.+           ...+++.+.+|   .+++..+++
T Consensus         1 m~k~vlVt----Gasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~   65 (256)
T PRK08017          1 MQKSVLIT----GCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-----------NSLGFTGILLDLDDPESVERAAD   65 (256)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-----------HhCCCeEEEeecCCHHHHHHHHH
Confidence            34689999    9999999999999999999999999987543321           11234555555   444443332


Q ss_pred             C------CCccEEEeCCCCC--------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 G------VTFDVVLDNNGKN--------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~------~~~d~Vi~~a~~~--------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .      ..+|.++|+++..                    +.+    ++.+++++++.+.+++|++||...+....    
T Consensus        66 ~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----  141 (256)
T PRK08017         66 EVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP----  141 (256)
T ss_pred             HHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC----
Confidence            2      2479999999842                    222    23457777888888999999953322111    


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCC-CcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v  271 (349)
                         ....+..+|...|.+.+       ..+++++++|||.+..+.         ...+..+. .......+...+.++++
T Consensus       142 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (256)
T PRK08017        142 ---GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF---------TDNVNQTQSDKPVENPGIAARFTLGP  209 (256)
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch---------hhcccchhhccchhhhHHHhhcCCCH
Confidence               11123446766665443       348999999998765432         11111111 11111222333567999


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +|+++.+..+++++..
T Consensus       210 ~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        210 EAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999988765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.51  E-value=8.1e-14  Score=126.02  Aligned_cols=187  Identities=16%  Similarity=0.177  Sum_probs=116.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+..+++...    +.. ...++.++.+|   .+.+..++..
T Consensus         1 ~~~vlVt----Gasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          1 GKVVIIT----GASEGIGRALAVRLARAGAQLVLAARNETRLASLAQE----LAD-HGGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence            4689999    9999999999999999999999999986443221100    000 01234455555   5555555543


Q ss_pred             C-----CccEEEeCCCC---------------------ChhhHHHHHHHHHh---CCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      .     ++|+|||+++.                     |+.++.++++.+..   .+..++|++||...+.....     
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  146 (263)
T PRK06181         72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT-----  146 (263)
T ss_pred             HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC-----
Confidence            2     47999999983                     23445566665532   23468999999776543211     


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                        ...+..+|...+.+.+.       .++++++++||.+..+.....     ..  ..+.+..  ..+.+...+++++|+
T Consensus       147 --~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-----~~--~~~~~~~--~~~~~~~~~~~~~dv  215 (263)
T PRK06181        147 --RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA-----LD--GDGKPLG--KSPMQESKIMSAEEC  215 (263)
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh-----cc--ccccccc--cccccccCCCCHHHH
Confidence              11233456665555432       389999999999876543210     00  0111111  112222368999999


Q ss_pred             HHHHHHHhcCC
Q 018900          275 SSMLTLAVENP  285 (349)
Q Consensus       275 a~~~~~~~~~~  285 (349)
                      +++++.+++..
T Consensus       216 a~~i~~~~~~~  226 (263)
T PRK06181        216 AEAILPAIARR  226 (263)
T ss_pred             HHHHHHHhhCC
Confidence            99999999864

>PRK07069 short chain dehydrogenase; Validated

Probab=99.51  E-value=6.6e-14  Score=125.54  Aligned_cols=199  Identities=14%  Similarity=0.199  Sum_probs=122.4

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC-CCCcccCCCCCCCcccceecC-C---CeEEEcChhhHHhhhcC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSA-G---GKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~-~~~~~~~~~~~~~~~~~l~~~-~---~~~~~~D~~~l~~~~~~  150 (349)
                      +||||    ||+|+||+++++.|+++|++|++++|+ .+....+...    +...... .   +..+..|.+++.++++.
T Consensus         1 ~ilVt----G~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (251)
T PRK07069          1 RAFIT----GAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAE----INAAHGEGVAFAAVQDVTDEAQWQALLAQ   72 (251)
T ss_pred             CEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH----HHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence            48999    999999999999999999999999997 3322211100    0000000 1   22233456666655543


Q ss_pred             C-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      .     ++|+|||+++.                    |+.    .++.++.++++.+.++||++||...+......    
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~----  148 (251)
T PRK07069         73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY----  148 (251)
T ss_pred             HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC----
Confidence            2     37999999983                    222    56788888888778899999997765432211    


Q ss_pred             CCCCCCCCChHHHHHHHHh-------h--CCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          202 GDVVKPDAGHVQVEKYISE-------N--FSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~--~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                         ..+..+|...+.+.+.       .  ++++..++||.+.++......    .......+..+.+         ...+
T Consensus       149 ---~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  216 (251)
T PRK07069        149 ---TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP---------LGRL  216 (251)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC---------CCCC
Confidence               1234566666555442       2  478899999998887543210    0001111111111         1234


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .+.+|++++++.++.++.. .+|+.+.+.++
T Consensus       217 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        217 GEPDDVAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            5789999999998776533 35567766655

>PRK05717 oxidoreductase; Validated

Probab=99.51  E-value=4.8e-13  Score=120.51  Aligned_cols=199  Identities=15%  Similarity=0.175  Sum_probs=123.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV-  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~-  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++ ...+.++.+|   .+++.+++ 
T Consensus         9 ~~k~vlIt----G~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~~~~~~~   76 (255)
T PRK05717          9 NGRVALVT----GAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-------KAL-GENAWFIAMDVADEAQVAAGVA   76 (255)
T ss_pred             CCCEEEEe----CCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-------HHc-CCceEEEEccCCCHHHHHHHHH
Confidence            46889999    99999999999999999999999988764332211       011 1234555666   44443333 


Q ss_pred             ---cCC-CccEEEeCCCC----------------------ChhhHHHHHHHHHh---CCCcEEEEeccccccCCCCCCCC
Q 018900          149 ---GGV-TFDVVLDNNGK----------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ---~~~-~~d~Vi~~a~~----------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                         +.. ++|+|||+++.                      |+.++.++++++..   ....++|++||...+....    
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----  152 (255)
T PRK05717         77 EVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----  152 (255)
T ss_pred             HHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----
Confidence               322 38999999983                      34467777777742   1235899999865433211    


Q ss_pred             CCCCCCCCCCChHHHHHHHHh----h--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~----~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ....+..+|.+++.+.+.    +  ++++..++||.+.++.........+.. .....   .+.     ..+.+.+|
T Consensus       153 ---~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~-~~~~~---~~~-----~~~~~~~~  220 (255)
T PRK05717        153 ---DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSE-ADHAQ---HPA-----GRVGTVED  220 (255)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHH-HHhhc---CCC-----CCCcCHHH
Confidence               112244577777665543    2  588999999999887532211111111 11110   011     13568899


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++.++..++.+... ..|+++.+.++.
T Consensus       221 va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        221 VAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HHHHHHHHcCchhcCccCcEEEECCCc
Confidence            99999988876433 345788886654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.51  E-value=8.3e-13  Score=119.21  Aligned_cols=199  Identities=16%  Similarity=0.177  Sum_probs=124.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|.||++++++|.++|++|++++|+.+...              ..++.++.+|   .+++.++++
T Consensus         8 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~   69 (260)
T PRK06523          8 AGKRALVT----GGTKGIGAATVARLLEAGARVVTTARSRPDDL--------------PEGVEFVAADLTTAEGCAAVAR   69 (260)
T ss_pred             CCCEEEEE----CCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------------CCceeEEecCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999764211              1134455555   455444332


Q ss_pred             ----CC-CccEEEeCCCC----------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          150 ----GV-TFDVVLDNNGK----------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       150 ----~~-~~d~Vi~~a~~----------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                          .. ++|+|||++|.                      |+.+.    +.++..+++.+..++|++||...+....   
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---  146 (260)
T PRK06523         70 AVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP---  146 (260)
T ss_pred             HHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC---
Confidence                21 37999999982                      22333    3445555666667899999976543211   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc----------hHHHHHHHHhC-CCcccCC
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRK-RPVPIPG  260 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~-~~~~~~~  260 (349)
                         .....+..+|.+++.+.+.       .++++.+++||.+..+......          .....+.+... ...+   
T Consensus       147 ---~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---  220 (260)
T PRK06523        147 ---ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP---  220 (260)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc---
Confidence               0112234567776655443       3799999999999887532100          00001111100 0001   


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCccC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVT  302 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~t  302 (349)
                          ...+...+|++++++.++.++. ...|+.+.+.+|...|
T Consensus       221 ----~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        221 ----LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             ----cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence                1124578999999999997653 3456889998876544

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.50  E-value=5e-13  Score=118.79  Aligned_cols=193  Identities=18%  Similarity=0.256  Sum_probs=120.1

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC-CcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhhhcC
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||||    |++|+||++++++|+++|++|++++|... ....+.       .++..  ..+.++.+|   .+++++++.+
T Consensus         1 vlIt----G~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   69 (239)
T TIGR01830         1 ALVT----GASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVV-------EELKAYGVKALGVVCDVSDREDVKAVVEE   69 (239)
T ss_pred             CEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH-------HHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            6899    99999999999999999999999998752 111110       11111  124455555   5666666543


Q ss_pred             C-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCcEEEEeccc-cccCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSA-GIYKPADEPPHV  200 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~-~vy~~~~~~~~~  200 (349)
                      .     ++|.|||+++.                    |+.++.++++++..    .+.++||++||. ++|+....    
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~----  145 (239)
T TIGR01830        70 IEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ----  145 (239)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC----
Confidence            2     47999999994                    23445566666543    456799999995 45553221    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                          ..+..+|...+.+.+.       .+++++++||+.+.++.... ....+...+....+.         ..+.+++|
T Consensus       146 ----~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~  211 (239)
T TIGR01830       146 ----ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSEKVKKKILSQIPL---------GRFGTPEE  211 (239)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cChHHHHHHHhcCCc---------CCCcCHHH
Confidence                1233456554444332       38999999999886653221 112222223222221         12457899


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ++++++.++..+.. ..|++|++.++
T Consensus       212 ~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       212 VANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            99999988865432 35689999765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=8e-13  Score=119.05  Aligned_cols=198  Identities=18%  Similarity=0.170  Sum_probs=125.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||+|.||++++++|.++|++|+++.|..+...          .++...++.++.+|   ++++.++++
T Consensus         6 ~~k~~lIt----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~----------~~l~~~~~~~~~~Dl~~~~~~~~~~~   71 (255)
T PRK06463          6 KGKVALIT----GGTRGIGRAIAEAFLREGAKVAVLYNSAENEA----------KELREKGVFTIKCDVGNRDQVKKSKE   71 (255)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH----------HHHHhCCCeEEEecCCCHHHHHHHHH
Confidence            45899999    99999999999999999999998877543211          11111134455555   666666654


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||++|.                    |+.+    ++.++..+++.+..++|++||...++...+    
T Consensus        72 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~----  147 (255)
T PRK06463         72 VVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE----  147 (255)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC----
Confidence            32     48999999983                    2333    455666666666679999999776542110    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC----CchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                        ....|..+|.+.+.+.+.       .++++..++||++-.+....    .....+...+....+         ...+.
T Consensus       148 --~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  216 (255)
T PRK06463        148 --GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTG  216 (255)
T ss_pred             --CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCc
Confidence              111244567776655443       37999999999885442211    000111111111111         12346


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+|++++++.++.+... .+|+.+.+.+|+
T Consensus       217 ~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        217 KPEDIANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             CHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            789999999999987643 456889888775

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.49  E-value=5.3e-13  Score=119.20  Aligned_cols=201  Identities=16%  Similarity=0.189  Sum_probs=124.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|+++.|+.+.. ..+..    .... ....+.++.+|   .+++.+++
T Consensus         4 ~~~~vlIt----G~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~   74 (245)
T PRK12937          4 SNKVAIVT----GASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVA----EIEA-AGGRAIAVQADVADAAAVTRLF   74 (245)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----HHHh-cCCeEEEEECCCCCHHHHHHHH
Confidence            46789999    9999999999999999999998887754321 11000    0000 11234555555   56666665


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      +..     ++|+|||++|.                    |+.+..++++++.+.  ...+||++||...+....      
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------  148 (245)
T PRK12937         75 DAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP------  148 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC------
Confidence            532     47999999983                    344555666655432  235899999866543211      


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                       ....+..+|..++.+++.       .++++++++||.+-.+.............+....+..         .+.+.+|+
T Consensus       149 -~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~  218 (245)
T PRK12937        149 -GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE---------RLGTPEEI  218 (245)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCC---------CCCCHHHH
Confidence             112234567776666543       2788999999987665421111122233333332221         23477999


Q ss_pred             HHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          275 SSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       275 a~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +++++.++.++.. .+|+++++.++
T Consensus       219 a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        219 AAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHHHHHHcCccccCccccEEEeCCC
Confidence            9999999977644 45688888765

>PLN02253 xanthoxin dehydrogenase

Probab=99.49  E-value=2.8e-13  Score=123.70  Aligned_cols=206  Identities=14%  Similarity=0.057  Sum_probs=125.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|++|||    ||+|+||++++++|+++|++|++++|..+..+++..       ++. ..++.++.+|   .+++.+++
T Consensus        17 ~~k~~lIt----Gas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~d~~~~~~~~   85 (280)
T PLN02253         17 LGKVALVT----GGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD-------SLGGEPNVCFFHCDVTVEDDVSRAV   85 (280)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------HhcCCCceEEEEeecCCHHHHHHHH
Confidence            46789999    999999999999999999999999987643322111       110 1134444554   66666655


Q ss_pred             cCC-----CccEEEeCCCC----------------------ChhhHHHHHHHHH----hCCCcEEEEecccc-ccCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK----------------------NLDAVRPVADWAK----SSGVKQFLFISSAG-IYKPADE  196 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~-vy~~~~~  196 (349)
                      ...     ++|+|||++|.                      |+.++.++++++.    +.+..++|++||.. .++... 
T Consensus        86 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-  164 (280)
T PLN02253         86 DFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG-  164 (280)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC-
Confidence            532     47999999983                      2344555555443    33445789888754 344321 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-----chHHHHHHHHh--CCCcccCCCC
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVR--KRPVPIPGSG  262 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~  262 (349)
                             ...|..+|.+.+.+.+.       .++++..++||.+..+.....     .....+.....  ......    
T Consensus       165 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----  233 (280)
T PLN02253        165 -------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL----  233 (280)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC----
Confidence                   12345578777666543       278999999999877642111     00011111000  000000    


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                        ....++.+|++++++.++.++.. .+|+.+++.+|...+.
T Consensus       234 --~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        234 --KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             --cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence              01246899999999999876543 3568899988754443

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.6e-13  Score=122.34  Aligned_cols=205  Identities=17%  Similarity=0.155  Sum_probs=126.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|.||++++++|+++|++|++++|+++.. ++.       .++.  ..++.++.+|   .+++..+
T Consensus         6 ~~~~ilIt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (258)
T PRK08628          6 KDKVVIVT----GGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFA-------EELRALQPRAEFVQVDLTDDAQCRDA   73 (258)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHH-------HHHHhcCCceEEEEccCCCHHHHHHH
Confidence            46799999    9999999999999999999999999987543 111       1111  1234555555   5666666


Q ss_pred             hcCC-----CccEEEeCCCC-------------------ChhhHHHHHHHHHh---CCCcEEEEeccccccCCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +++.     ++|+|||++|.                   |+.+..++.+.+..   .+.++||++||...+....     
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----  148 (258)
T PRK08628         74 VEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG-----  148 (258)
T ss_pred             HHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC-----
Confidence            5532     47999999993                   22333344444321   2346899999965432211     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-----hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                        ....+..+|..++.+.+.       .++++..+|||.++++......     .......+....+    . +   ..+
T Consensus       149 --~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~-~---~~~  218 (258)
T PRK08628        149 --GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP----L-G---HRM  218 (258)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCC----c-c---ccC
Confidence              122344567776665543       3799999999999987422100     0000111111111    0 1   135


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHH
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~e  305 (349)
                      +..+|+|++++.++..... .+|+.+.+.++. ..+++
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~-~~~~~  255 (258)
T PRK08628        219 TTAEEIADTAVFLLSERSSHTTGQWLFVDGGY-VHLDR  255 (258)
T ss_pred             CCHHHHHHHHHHHhChhhccccCceEEecCCc-ccccc
Confidence            7889999999999987643 355788887664 44444

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.49  E-value=7.4e-13  Score=118.60  Aligned_cols=199  Identities=16%  Similarity=0.157  Sum_probs=122.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||.+++++|+++|++|++++|+...  +...    ....+ ...+..+.+|   .+++..+++
T Consensus         4 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~vi~~~r~~~~--~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~   72 (248)
T TIGR01832         4 EGKVALVT----GANTGLGQGIAVGLAEAGADIVGAGRSEPS--ETQQ----QVEAL-GRRFLSLTADLSDIEAIKALVD   72 (248)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCchHH--HHHH----HHHhc-CCceEEEECCCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999986521  1000    00011 1234555665   555554443


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~g-v~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||+++.                    |+.+..++++++.    +.+ ..++|++||...|.....   
T Consensus        73 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---  149 (248)
T TIGR01832        73 SAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR---  149 (248)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC---
Confidence            21     48999999983                    3344445555443    333 468999999876654221   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...+..+|...+.+.+.       .++++..++||.+..+....... ......+....    +     ...++..
T Consensus       150 ----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~  216 (248)
T TIGR01832       150 ----VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERI----P-----AGRWGTP  216 (248)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcC----C-----CCCCcCH
Confidence                11234567776554433       28999999999997764321100 00011111111    1     1347889


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +|+|++++.++..... ..|+++.+.++
T Consensus       217 ~dva~~~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       217 DDIGGPAVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence            9999999999986543 34567776655

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.49  E-value=1.2e-12  Score=116.95  Aligned_cols=197  Identities=15%  Similarity=0.149  Sum_probs=120.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|+.|++.+|+.+..+++..       ++ ..++.++.+|   .+++.++++
T Consensus         5 ~~~~vlIt----Ga~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T PRK12936          5 SGRKALVT----GASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA-------EL-GERVKIFPANLSDRDEVKALGQ   72 (245)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-------Hh-CCceEEEEccCCCHHHHHHHHH
Confidence            46799999    999999999999999999999888887654432111       01 1234455555   555555543


Q ss_pred             C-----CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEecccc-ccCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                      .     .++|+|||+++.                    |+.+..++++++    ++.+.++||++||.. .++....   
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  149 (245)
T PRK12936         73 KAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ---  149 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC---
Confidence            2     247999999983                    334444555543    334567999999964 4443321   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                           ..+..+|.+++.+.+       ..++++++++|+.+..+..... ............+         ...+.+.+
T Consensus       150 -----~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~  214 (245)
T PRK12936        150 -----ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-NDKQKEAIMGAIP---------MKRMGTGA  214 (245)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-ChHHHHHHhcCCC---------CCCCcCHH
Confidence                 123345654433332       2379999999998765432211 1111111111111         12245789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+++++..++..+.. .+|+++++.++.
T Consensus       215 ~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        215 EVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            999999988876543 356899998874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.48  E-value=4.2e-13  Score=120.85  Aligned_cols=200  Identities=13%  Similarity=0.198  Sum_probs=126.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|.++|++|++++|+.+..+.+..       ++.  ..++.++.+|   .+++.++
T Consensus        10 ~~k~vlVt----G~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~-------~l~~~~~~~~~~~~D~~~~~~i~~~   78 (255)
T PRK06113         10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVVD-------EIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------HHHhcCCcEEEEEccCCCHHHHHHH
Confidence            47899999    999999999999999999999999987644322110       111  1123344455   5555554


Q ss_pred             hcCC-----CccEEEeCCCC-------------------ChhhHHHHHHHHH----hCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..     ++|+|||+++.                   |+.+..++++++.    +.+..+||++||........    
T Consensus        79 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  154 (255)
T PRK06113         79 ADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI----  154 (255)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC----
Confidence            4331     47999999983                   3445666666654    34446899999965432111    


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         ....+..+|.+++.+++.       .++++.++.||.+..+.......+.+...+.+..++         ..+...+
T Consensus       155 ---~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  222 (255)
T PRK06113        155 ---NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQ  222 (255)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCC---------CCCcCHH
Confidence               112344567776665543       378999999998876543221122222333222221         1245789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |++++++.++..... .+|+++++.++.
T Consensus       223 d~a~~~~~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        223 DIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             HHHHHHHHHcCccccCccCCEEEECCCc
Confidence            999999999976543 356899998875

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.4e-13  Score=119.21  Aligned_cols=191  Identities=19%  Similarity=0.202  Sum_probs=119.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|+++...++..       ++.. .++.++.+|   .+++.+.+
T Consensus         5 ~~~~ilIt----Gatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-------~l~~~~~~~~~~~D~~~~~~~~~~~   73 (237)
T PRK07326          5 KGKVALIT----GGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAA-------ELNNKGNVLGLAADVRDEADVQRAV   73 (237)
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHH-------HHhccCcEEEEEccCCCHHHHHHHH
Confidence            35789999    999999999999999999999999998754332211       1110 245556665   55555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh---CCCcEEEEeccccccCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ++.     ++|+|||+++.                    |+.+..++++++..   .+.+++|++||...+.....    
T Consensus        74 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----  149 (237)
T PRK07326         74 DAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG----  149 (237)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC----
Confidence            432     47999999873                    23334455554432   24568999999754432111    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|.+.+.+.+       +.+++++++||+.+..+.....             +    ..  .....+..+|
T Consensus       150 ---~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------------~----~~--~~~~~~~~~d  207 (237)
T PRK07326        150 ---GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------------P----SE--KDAWKIQPED  207 (237)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-------------c----ch--hhhccCCHHH
Confidence               0112234544333332       2489999999999866532210             0    00  0011368899


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCc
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRA  300 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~  300 (349)
                      ++++++.++..+.......+.+..+++
T Consensus       208 ~a~~~~~~l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        208 IAQLVLDLLKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HHHHHHHHHhCCccccccceEEecCCC
Confidence            999999999988765445666655443

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.48  E-value=7.6e-13  Score=118.53  Aligned_cols=199  Identities=16%  Similarity=0.164  Sum_probs=118.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      |+++||||    ||+|+||+.+++.|+++|++|+++.+ +.+......       .++.  ..++.++.+|   .+++.+
T Consensus         1 m~k~ilIt----Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (248)
T PRK06947          1 MRKVVLIT----GASRGIGRATAVLAAARGWSVGINYARDAAAAEETA-------DAVRAAGGRACVVAGDVANEADVIA   69 (248)
T ss_pred             CCcEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCcEEEEEeccCCHHHHHH
Confidence            57899999    99999999999999999999987754 333222110       0111  1234555565   455555


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHH-HHhCC------CcEEEEecccc-ccC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADW-AKSSG------VKQFLFISSAG-IYK  192 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~-a~~~g------v~~~i~~Ss~~-vy~  192 (349)
                      +++..     ++|+|||++|.                     |+.+...++++ ++...      -.+||++||.. .++
T Consensus        70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~  149 (248)
T PRK06947         70 MFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG  149 (248)
T ss_pred             HHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC
Confidence            44321     48999999983                     23344444432 22221      23699999864 444


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ....       ...+..+|..++.+.+.       .+++++++|||++..+.....-............+.         
T Consensus       150 ~~~~-------~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------  213 (248)
T PRK06947        150 SPNE-------YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL---------  213 (248)
T ss_pred             CCCC-------CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCC---------
Confidence            3211       12355678776654432       379999999999987753211011111111111110         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .-+...+|+++.++.++.++.. ..|+.+.+.++
T Consensus       214 ~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        214 GRAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            1135789999999999887643 45677777654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.47  E-value=3.2e-13  Score=120.48  Aligned_cols=183  Identities=11%  Similarity=0.099  Sum_probs=117.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +|+++|||    ||+|.+|+.++++|+++|++|++++|+.+....+...    ..+ ...++.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   75 (241)
T PRK07454          5 SMPRALIT----GASSGIGKATALAFAKAGWDLALVARSQDALEALAAE----LRS-TGVKAAAYSIDLSNPEAIAPGIA   75 (241)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-CCCcEEEEEccCCCHHHHHHHHH
Confidence            56899999    9999999999999999999999999986543321110    000 01245556666   555555544


Q ss_pred             C-----CCccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      .     .++|+|||+++.                    |+.+..    .++..+++.+..+||++||...++....    
T Consensus        76 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  151 (241)
T PRK07454         76 ELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ----  151 (241)
T ss_pred             HHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC----
Confidence            2     138999999983                    223333    3444556666689999999877654221    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|...+.+.+       ..+++++++|||.+-.+.....            ......    ....++..+|
T Consensus       152 ---~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~------------~~~~~~----~~~~~~~~~~  212 (241)
T PRK07454        152 ---WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE------------TVQADF----DRSAMLSPEQ  212 (241)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc------------cccccc----ccccCCCHHH
Confidence               1123345666555433       2489999999999876542211            000000    0123578999


Q ss_pred             HHHHHHHHhcCCCc
Q 018900          274 LSSMLTLAVENPEA  287 (349)
Q Consensus       274 va~~~~~~~~~~~~  287 (349)
                      +|++++.++.++..
T Consensus       213 va~~~~~l~~~~~~  226 (241)
T PRK07454        213 VAQTILHLAQLPPS  226 (241)
T ss_pred             HHHHHHHHHcCCcc
Confidence            99999999998754

>PRK08264 short chain dehydrogenase; Validated

Probab=99.47  E-value=1.5e-12  Score=115.90  Aligned_cols=167  Identities=16%  Similarity=0.114  Sum_probs=112.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|++|++++++|+++|+ +|++++|+.+...+            ...++.++.+|   .+++.+++
T Consensus         5 ~~~~vlIt----Ggsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~   68 (238)
T PRK08264          5 KGKVVLVT----GANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAA   68 (238)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHH
Confidence            35689999    9999999999999999998 99999998754432            11244555555   67777777


Q ss_pred             cCCC-ccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCCC
Q 018900          149 GGVT-FDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       149 ~~~~-~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      .... +|+|||+++.                     |+.+..++++++    ++.+..+||++||...+.....      
T Consensus        69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~------  142 (238)
T PRK08264         69 EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN------  142 (238)
T ss_pred             HhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC------
Confidence            6543 7999999985                     234455555554    4456778999999766543211      


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                       ...+..+|..++.+.+.       .+++++++||+.+.++....             .    .+      ..+..+|++
T Consensus       143 -~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~----~~------~~~~~~~~a  198 (238)
T PRK08264        143 -LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------L----DA------PKASPADVA  198 (238)
T ss_pred             -chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------C----Cc------CCCCHHHHH
Confidence             11233456666554432       37999999999886653211             0    00      135677888


Q ss_pred             HHHHHHhcCC
Q 018900          276 SMLTLAVENP  285 (349)
Q Consensus       276 ~~~~~~~~~~  285 (349)
                      +.++..++..
T Consensus       199 ~~~~~~~~~~  208 (238)
T PRK08264        199 RQILDALEAG  208 (238)
T ss_pred             HHHHHHHhCC
Confidence            8888777754

>PRK06398 aldose dehydrogenase; Validated

Probab=99.47  E-value=5.1e-12  Score=114.14  Aligned_cols=195  Identities=11%  Similarity=0.120  Sum_probs=121.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|.||++++++|+++|++|++++|+.+...                .+..+.+|   ++++.++++
T Consensus         5 ~gk~vlIt----Gas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----------------~~~~~~~D~~~~~~i~~~~~   64 (258)
T PRK06398          5 KDKVAIVT----GGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----------------DVDYFKVDVSNKEQVIKGID   64 (258)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCccccC----------------ceEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999764321                23444444   566655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||++|.                    |+.+...+++    .+++.+..++|++||...+....     
T Consensus        65 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  139 (258)
T PRK06398         65 YVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR-----  139 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC-----
Confidence            32     48999999983                    3344444444    44455667999999976654321     


Q ss_pred             CCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCC------chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          201 EGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                        ....|..+|.+++.+.+..      .+++..++||.+-.+.....      ...........     .++.......+
T Consensus       140 --~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  212 (258)
T PRK06398        140 --NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIR-----EWGEMHPMKRV  212 (258)
T ss_pred             --CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHH-----hhhhcCCcCCC
Confidence              1123445787776665532      37889999998865421110      00000000000     00000111235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|++++.++..... ..|+++.+.+|.
T Consensus       213 ~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        213 GKPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            6789999999999876533 456788887764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=4.8e-13  Score=119.47  Aligned_cols=200  Identities=16%  Similarity=0.170  Sum_probs=121.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|+++ +|+.+....+...    +.. ....+.++.+|   ++++.+++
T Consensus         4 ~~~~ilI~----Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T PRK05565          4 MGKVAIVT----GASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEE----IKE-EGGDAIAVKADVSSEEDVENLV   74 (247)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHh-cCCeEEEEECCCCCHHHHHHHH
Confidence            56799999    999999999999999999999999 8876433221100    000 11235556666   55555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEecccccc-CCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIY-KPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy-~~~~~~~  198 (349)
                      +..     ++|+|||+++.                    |+.+..++++    .+++.+.++||++||...+ +..... 
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~-  153 (247)
T PRK05565         75 EQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEV-  153 (247)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCcc-
Confidence            422     47999999984                    2334334444    4445566789999996543 322111 


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                             .+..+|...+.+++       +.+++++.+|||.+..+..... .......+....         ....+...
T Consensus       154 -------~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~-~~~~~~~~~~~~---------~~~~~~~~  216 (247)
T PRK05565        154 -------LYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF-SEEDKEGLAEEI---------PLGRLGKP  216 (247)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc-ChHHHHHHHhcC---------CCCCCCCH
Confidence                   12234544333322       2389999999999866543221 111111111111         11235688


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+++.++.++..... .+|+.+++.++.
T Consensus       217 ~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        217 EEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            9999999999987644 456888888763

>PRK09242 tropinone reductase; Provisional

Probab=99.47  E-value=6.4e-13  Score=119.78  Aligned_cols=204  Identities=12%  Similarity=0.204  Sum_probs=126.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||+|.||+.+++.|.++|++|++++|+.+..+++.......   ....++..+.+|   .+++..++.
T Consensus         8 ~~k~~lIt----Ga~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dl~~~~~~~~~~~   80 (257)
T PRK09242          8 DGQTALIT----GASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEE---FPEREVHGLAADVSDDEDRRAILD   80 (257)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh---CCCCeEEEEECCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875443221100000   001234455555   444444443


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||++|.                    |+.+..++++++    ++.+..+||++||...+.....    
T Consensus        81 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----  156 (257)
T PRK09242         81 WVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS----  156 (257)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC----
Confidence            21     37999999983                    334455555544    4556679999999765543221    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         ...+..+|...+.+.+.       .++++..++||++..+...... ...+.+......+..         -+...+
T Consensus       157 ---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  224 (257)
T PRK09242        157 ---GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMR---------RVGEPE  224 (257)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCC---------CCcCHH
Confidence               11234567676665543       3799999999999877543211 112233333322221         134678


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |++.++..++..... .+|+.+.+.++.
T Consensus       225 ~va~~~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        225 EVAAAVAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             HHHHHHHHHhCcccccccCCEEEECCCe
Confidence            999999999875433 345788777653

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2.2e-12  Score=115.93  Aligned_cols=196  Identities=17%  Similarity=0.162  Sum_probs=124.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++++|||    ||+|.||++++++|+++|++|++++|+.+...             ...++.++.+|   .+++.+++.
T Consensus         5 ~~k~~lIt----Gas~gIG~~la~~l~~~g~~v~~~~r~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~   67 (252)
T PRK07856          5 TGRVVLVT----GGTRGIGAGIARAFLAAGATVVVCGRRAPETV-------------DGRPAEFHAADVRDPDQVAALVD   67 (252)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCChhhhh-------------cCCceEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999764310             01234455555   556666554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh----C-CCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----S-GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~-gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||++|.                    |+.++..+++++..    . +..+||++||...+....    
T Consensus        68 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----  143 (252)
T PRK07856         68 AIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP----  143 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC----
Confidence            33     47999999983                    34556666665532    2 346899999976543211    


Q ss_pred             CCCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         ....+..+|..++.+.+..      .+++..++||.+..+...... -......+....+.         ..+...+
T Consensus       144 ---~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~  211 (252)
T PRK07856        144 ---GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL---------GRLATPA  211 (252)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC---------CCCcCHH
Confidence               1122345677766655432      367888999988765322100 00111112111111         1245789


Q ss_pred             HHHHHHHHHhcCCC-ccCCCEEEeeCCCcc
Q 018900          273 DLSSMLTLAVENPE-AASSNIFNLVSDRAV  301 (349)
Q Consensus       273 Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~  301 (349)
                      |+++.++.++..+. ..+|+.+.+.+|...
T Consensus       212 ~va~~~~~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        212 DIAWACLFLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             HHHHHHHHHcCcccCCccCCEEEECCCcch
Confidence            99999999987653 356788999887543

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.4e-13  Score=121.37  Aligned_cols=207  Identities=16%  Similarity=0.139  Sum_probs=128.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|.||++++++|+++|++|++++|+.+...++..       ++.  .+.++.+|   ++++.++++
T Consensus         4 ~~~~ilVt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~--~~~~~~~D~~~~~~~~~~~~   70 (273)
T PRK07825          4 RGKVVAIT----GGARGIGLATARALAALGARVAIGDLDEALAKETAA-------ELG--LVVGGPLDVTDPASFAAFLD   70 (273)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------Hhc--cceEEEccCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998754432111       110  24455555   555554443


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     .+|++||++|.                    |+.+    ++.++..+++.+..+||++||...+....     
T Consensus        71 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  145 (273)
T PRK07825         71 AVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVP-----  145 (273)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCC-----
Confidence            32     37999999984                    2222    34455566677888999999976443211     


Q ss_pred             CCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                        ....+..+|...+.+       +...|+++++++|+.+-.+...             +.+      +.....+++.+|
T Consensus       146 --~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------------~~~------~~~~~~~~~~~~  204 (273)
T PRK07825        146 --GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------------GTG------GAKGFKNVEPED  204 (273)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------------ccc------cccCCCCCCHHH
Confidence              112233466654433       2334899999999987543211             100      011234689999


Q ss_pred             HHHHHHHHhcCCCccCCCEEE--eeC----CCccCHHHHHHHHHHHhCCCceeE
Q 018900          274 LSSMLTLAVENPEAASSNIFN--LVS----DRAVTLDGMAKLCAQAAGLPVEIV  321 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~--i~~----~~~~t~~el~~~~~~~~g~~~~~~  321 (349)
                      +|+.++.++.++..   .++.  ...    ...+....+.+.+.+.++.+..+.
T Consensus       205 va~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  255 (273)
T PRK07825        205 VAAAIVGTVAKPRP---EVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFL  255 (273)
T ss_pred             HHHHHHHHHhCCCC---EEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccceee
Confidence            99999999988654   1211  000    012334566667777777654443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=2e-12  Score=116.00  Aligned_cols=198  Identities=12%  Similarity=0.166  Sum_probs=123.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++||||    ||+|+||+++++.|+++|++|+++.|.. +....+.       .++ ..++.++.+|   .+++.++++
T Consensus         5 ~k~ilIt----Gas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~   72 (253)
T PRK08642          5 EQTVLVT----GGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA-------DEL-GDRAIALQADVTDREQVQAMFA   72 (253)
T ss_pred             CCEEEEe----CCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHHH
Confidence            4789999    9999999999999999999998876543 2211110       011 1234555555   556666554


Q ss_pred             CC------CccEEEeCCCC--------------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCC
Q 018900          150 GV------TFDVVLDNNGK--------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       150 ~~------~~d~Vi~~a~~--------------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~  193 (349)
                      ..      ++|+|||+++.                          |+.+..++++++    ++.+..++|++||...+..
T Consensus        73 ~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  152 (253)
T PRK08642         73 TATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNP  152 (253)
T ss_pred             HHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC
Confidence            32      27999999863                          233445555554    3445679999998543221


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..  +     ...|..+|.+.+.+++..       ++++..++||.+..+.............+....++         .
T Consensus       153 ~~--~-----~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~  216 (253)
T PRK08642        153 VV--P-----YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPL---------R  216 (253)
T ss_pred             CC--C-----ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCc---------C
Confidence            11  1     123556788877766553       78899999998866532211111222222222211         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      .+.+.+|+++++..++.++. ..+|+++.+.++.
T Consensus       217 ~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        217 KVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             CCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            36789999999999998653 3566888888764

>PRK08643 acetoin reductase; Validated

Probab=99.46  E-value=1.3e-12  Score=117.72  Aligned_cols=205  Identities=15%  Similarity=0.174  Sum_probs=121.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |++++|||    ||+|+||++++++|+++|++|++++|+.+...++....    ... ..++.++.+|   ++++.++++
T Consensus         1 ~~k~~lIt----Gas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~   71 (256)
T PRK08643          1 MSKVALVT----GAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKL----SKD-GGKAIAVKADVSDRDQVFAAVR   71 (256)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----Hhc-CCeEEEEECCCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999865433221100    000 1234445555   555555554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCC-CcEEEEeccccc-cCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSG-VKQFLFISSAGI-YKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~g-v~~~i~~Ss~~v-y~~~~~~~  198 (349)
                      ..     ++|+|||+++.                    |+.++.    .+++.+++.+ ..++|++||... ++...   
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  148 (256)
T PRK08643         72 QVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE---  148 (256)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC---
Confidence            32     47999999983                    223333    3334444433 358999998653 33221   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHh--CCCcc----cCCCCCcc
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVP----IPGSGMQF  265 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~  265 (349)
                           ...+..+|...+.+.+.       .|++++.++||.+..+....     +......  +.+..    .+-.....
T Consensus       149 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (256)
T PRK08643        149 -----LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD-----IAHQVGENAGKPDEWGMEQFAKDITL  218 (256)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH-----HHhhhccccCCCchHHHHHHhccCCC
Confidence                 12234567765554432       47999999999987764211     1110000  00000    00000001


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+...+|+++++..++..... .+|+++.+.+|.
T Consensus       219 ~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        219 GRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            1356789999999999876543 566888887764

>PRK06196 oxidoreductase; Provisional

Probab=99.45  E-value=4.5e-12  Score=117.91  Aligned_cols=196  Identities=15%  Similarity=0.090  Sum_probs=115.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++  .++.++.+|   .+++++++.
T Consensus        25 ~~k~vlIT----GasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~-------~~l--~~v~~~~~Dl~d~~~v~~~~~   91 (315)
T PRK06196         25 SGKTAIVT----GGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL-------AGI--DGVEVVMLDLADLESVRAFAE   91 (315)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh--hhCeEEEccCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999865433211       111  124555666   555555543


Q ss_pred             C-----CCccEEEeCCCC------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCC-CCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVE  201 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~-~~~~~~e  201 (349)
                      .     .++|+|||+||.                  |+.+    ++.++..+++.+..++|++||.+.+... .......
T Consensus        92 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~  171 (315)
T PRK06196         92 RFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHF  171 (315)
T ss_pred             HHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCc
Confidence            2     248999999983                  2233    4555666666666799999997543211 1000000


Q ss_pred             CCCC----CCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHH-HHHHhCCCcccCCCCCcceeee
Q 018900          202 GDVV----KPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       202 ~~~~----~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      ..+.    .|..+|.+.+.+.+       +.|++++++|||++.++........... .........++.      ..+.
T Consensus       172 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  245 (315)
T PRK06196        172 TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID------PGFK  245 (315)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh------hhcC
Confidence            0111    12234555444332       2389999999999988754321000000 000000000000      0235


Q ss_pred             eHHHHHHHHHHHhcCCCc
Q 018900          270 HVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~  287 (349)
                      ..+|+|..++.++..+..
T Consensus       246 ~~~~~a~~~~~l~~~~~~  263 (315)
T PRK06196        246 TPAQGAATQVWAATSPQL  263 (315)
T ss_pred             CHhHHHHHHHHHhcCCcc
Confidence            679999999999876543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.44  E-value=1e-11  Score=110.34  Aligned_cols=193  Identities=15%  Similarity=0.142  Sum_probs=124.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhh-HHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE-VGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~-l~~~~~~~  151 (349)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.....              ..++..+.+|..+ ++++++..
T Consensus         4 ~~k~~lVt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~   65 (235)
T PRK06550          4 MTKTVLIT----GAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDDLEPLFDWV   65 (235)
T ss_pred             CCCEEEEc----CCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHHHHHHHHhh
Confidence            46789999    99999999999999999999999998753211              1235566777433 45555544


Q ss_pred             -CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          152 -TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       152 -~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                       ++|+|||+++.                     |+.++.++++++    ++.+..+||++||...+....       ...
T Consensus        66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------~~~  138 (235)
T PRK06550         66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG-------GGA  138 (235)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-------CCc
Confidence             37999999982                     233445555544    344556899999965432211       112


Q ss_pred             CCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHH
Q 018900          206 KPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       206 ~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                      .+..+|..++.+.+.       .++++++++||.+..+.....+. ..+...+....+         ...+...+|+|++
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~  209 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAEL  209 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHH
Confidence            234567765554432       38999999999998775433221 111122222221         1235678999999


Q ss_pred             HHHHhcCCC-ccCCCEEEeeCCC
Q 018900          278 LTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       278 ~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      ++.++.+.. ...|+++.+.+|.
T Consensus       210 ~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        210 TLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             HHHHcChhhccCCCcEEEECCce
Confidence            999997653 3345788877663

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.2e-12  Score=118.04  Aligned_cols=203  Identities=13%  Similarity=0.183  Sum_probs=124.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|+||||    ||+|+||++++++|+++|++|+++.|.. +..+.+...    ... ....+.++.+|   .+++.+++
T Consensus         8 ~~k~vlIt----Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          8 APRAALVT----GAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAE----IRA-LGRRAVALQADLADEAEVRALV   78 (258)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HHh-cCCeEEEEEcCCCCHHHHHHHH
Confidence            46789999    9999999999999999999999887753 222111000    000 01234455555   55565555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+++.                    |+.++.++++++..    .+..++|++++...+.....   
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~---  155 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPD---  155 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCC---
Confidence            432     37999999983                    45566666665544    23457888887554432110   


Q ss_pred             CCCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                          ...|..+|.+++.+.+..      .+.++.++||.+......  ....+ .......+   .+      ...+++|
T Consensus       156 ----~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~--~~~~~-~~~~~~~~---~~------~~~~~~d  219 (258)
T PRK09134        156 ----FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ--SPEDF-ARQHAATP---LG------RGSTPEE  219 (258)
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc--ChHHH-HHHHhcCC---CC------CCcCHHH
Confidence                112445676665544432      378899999988654321  11112 22222221   11      1367999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCHH
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~~  304 (349)
                      +|++++.+++++.. +|+.|++.++..++++
T Consensus       220 ~a~~~~~~~~~~~~-~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        220 IAAAVRYLLDAPSV-TGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HHHHHHHHhcCCCc-CCCEEEECCCeecccc
Confidence            99999999987543 4589999888655554

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.44  E-value=5.6e-12  Score=113.52  Aligned_cols=202  Identities=14%  Similarity=0.141  Sum_probs=122.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      +++++|||    ||+|.||++++++|+++|++|++++|+.+.. +++.       .++.  ...+..+.+|   ++++.+
T Consensus         7 ~~k~~lVt----G~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~i~~   75 (254)
T PRK06114          7 DGQVAFVT----GAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETA-------EHIEAAGRRAIQIAADVTSKADLRA   75 (254)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH-------HHHHhcCCceEEEEcCCCCHHHHHH
Confidence            46799999    9999999999999999999999999975321 1110       1111  1133445555   555555


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++...     ++|+|||++|.                    |+.+.    +.++..+++.+..+||++||..-+......
T Consensus        76 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  155 (254)
T PRK06114         76 AVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL  155 (254)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC
Confidence            54432     37999999983                    33343    344455555666799999986533211110


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ....+..+|.+.+.+.+.       .|+++.+++||.+..+.............+....++         ..+..
T Consensus       156 -----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~  221 (254)
T PRK06114        156 -----LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAK  221 (254)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcC
Confidence                 012234466665554432       389999999999987653221111111222222221         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|++.+++.++.+... ..|+++.+.+|.
T Consensus       222 ~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        222 VDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            89999999998876533 456888887764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.44  E-value=2.1e-12  Score=116.49  Aligned_cols=202  Identities=19%  Similarity=0.232  Sum_probs=125.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|.||..++++|+++|++|+++.|+ +..+++...    ..+ ....+.++.+|   .+++..++
T Consensus        13 l~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935         13 LDGKVAIVT----GGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRL----IEK-EGRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHH----HHh-cCCceEEEEcCCCCHHHHHHHH
Confidence            356899999    999999999999999999999999987 322211100    000 01235556666   55555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     .+|++||+++.                    |+.+    ++.++..+++.+..++|++||...+.....   
T Consensus        83 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  159 (258)
T PRK06935         83 KEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF---  159 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC---
Confidence            432     47999999983                    2333    334445555666679999999776543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...+..+|.+++.+.+.       .|+++..++||.+..+...... .......+....+         ...+...
T Consensus       160 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  226 (258)
T PRK06935        160 ----VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIP---------AGRWGEP  226 (258)
T ss_pred             ----chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCC---------CCCCCCH
Confidence                12234567776655443       3799999999998766422100 0011111111111         1235678


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++..+..++.+... ..|+++.+.+|.
T Consensus       227 ~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        227 DDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            9999999998876543 356888887764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.1e-12  Score=118.56  Aligned_cols=181  Identities=18%  Similarity=0.139  Sum_probs=112.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||+|+||+.++++|+++|++|++++|+.+..+++..       .+....+.++.+|   .+++.+++.+
T Consensus         1 mk~vlIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~v~~~~~~   69 (260)
T PRK08267          1 MKSIFIT----GAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-------ELGAGNAWTGALDVTDRAAWDAALAD   69 (260)
T ss_pred             CcEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------HhcCCceEEEEecCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998754432211       1111245555555   5555555542


Q ss_pred             ------CCccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccc-cccCCCCCCCC
Q 018900          151 ------VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSA-GIYKPADEPPH  199 (349)
Q Consensus       151 ------~~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~-~vy~~~~~~~~  199 (349)
                            .++|+|||++|.                    |+.++.+++++    ++..+..+||++||. ++|+....   
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---  146 (260)
T PRK08267         70 FAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGL---  146 (260)
T ss_pred             HHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCc---
Confidence                  247999999983                    33444455444    455566799999996 45553221   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                           ..+..+|...+.+.+.       .++++++++||.+..+..... ...........           ....+..+
T Consensus       147 -----~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~-----------~~~~~~~~  209 (260)
T PRK08267        147 -----AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT-SNEVDAGSTKR-----------LGVRLTPE  209 (260)
T ss_pred             -----hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc-cchhhhhhHhh-----------ccCCCCHH
Confidence                 1223466665554433       379999999998865432210 00000000000           01135679


Q ss_pred             HHHHHHHHHhcCC
Q 018900          273 DLSSMLTLAVENP  285 (349)
Q Consensus       273 Dva~~~~~~~~~~  285 (349)
                      |+++.++.++++.
T Consensus       210 ~va~~~~~~~~~~  222 (260)
T PRK08267        210 DVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.44  E-value=1.3e-12  Score=117.72  Aligned_cols=203  Identities=12%  Similarity=0.173  Sum_probs=125.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||+.++++|+++|++|++++|+.+....+...    +.. ...++.++.+|   .+++.+++
T Consensus         9 ~~~k~ilIt----Gas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124          9 LAGQVALVT----GSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAA----LRA-AGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHH----HHh-cCCceEEEEccCCCHHHHHHHH
Confidence            457899999    9999999999999999999999999986543321100    000 01234455555   55555554


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHH----HHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll----~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+++.                    |+.++.++.    +.+++.+.++||++||...+....+   
T Consensus        80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  156 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG---  156 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC---
Confidence            422     47999999993                    223333444    5555567789999999654322111   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...+..+|...+.+.+.       .++++..++||.+..+...... ...+...+....+         ...+++.
T Consensus       157 ----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  223 (256)
T PRK06124        157 ----DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTP---------LGRWGRP  223 (256)
T ss_pred             ----ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCC---------CCCCCCH
Confidence                12233456665544332       3799999999999887532211 0111122222111         1236889


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++++++.++.++.. .+|+.+.+.++.
T Consensus       224 ~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        224 EEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            9999999999988754 355777776654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.44  E-value=7.9e-13  Score=117.80  Aligned_cols=181  Identities=17%  Similarity=0.150  Sum_probs=114.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|+.+..+.+...    ... ...++.++.+|   ++++.++++
T Consensus         6 ~~~~vlVt----G~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          6 QGKNALIT----GAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEE----VEA-YGVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHH-hCCeEEEEECCCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999986543221100    000 11235555666   566665554


Q ss_pred             CC-----CccEEEeCCCCC--------------------hhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGKN--------------------LDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~~--------------------~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     .+|+|||+++..                    +.++.++++++    ++.+.+++|++||...+.....    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----  152 (239)
T PRK07666         77 QLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV----  152 (239)
T ss_pred             HHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC----
Confidence            32     479999999842                    23334444444    4556779999999654432211    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|...+.+++       +.+++++++|||.+..+.....        ....      +   ....++..+|
T Consensus       153 ---~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~--------~~~~------~---~~~~~~~~~~  212 (239)
T PRK07666        153 ---TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL--------GLTD------G---NPDKVMQPED  212 (239)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc--------cccc------c---CCCCCCCHHH
Confidence               1112335655544432       2489999999999877642210        0000      0   1123578999


Q ss_pred             HHHHHHHHhcCCC
Q 018900          274 LSSMLTLAVENPE  286 (349)
Q Consensus       274 va~~~~~~~~~~~  286 (349)
                      +|+.++.++.++.
T Consensus       213 ~a~~~~~~l~~~~  225 (239)
T PRK07666        213 LAEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998863

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2e-12  Score=116.51  Aligned_cols=202  Identities=16%  Similarity=0.175  Sum_probs=121.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.+...+...       ++...-+..+..|.+++.++++..
T Consensus         5 ~~~~~vlIt----GasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   73 (255)
T PRK06057          5 LAGRVAVIT----GGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD-------EVGGLFVPTDVTDEDAVNALFDTA   73 (255)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------HcCCcEEEeeCCCHHHHHHHHHHH
Confidence            356899999    999999999999999999999999997644322110       110011233334466666666532


Q ss_pred             -----CccEEEeCCCC----------------------ChhhH----HHHHHHHHhCCCcEEEEeccc-cccCCCCCCCC
Q 018900          152 -----TFDVVLDNNGK----------------------NLDAV----RPVADWAKSSGVKQFLFISSA-GIYKPADEPPH  199 (349)
Q Consensus       152 -----~~d~Vi~~a~~----------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~-~vy~~~~~~~~  199 (349)
                           ++|+|||+++.                      |+.++    +.++..+++.+..++|++||. ++++...+   
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~---  150 (255)
T PRK06057         74 AETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS---  150 (255)
T ss_pred             HHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC---
Confidence                 47999999983                      12222    234444555556689999884 45654211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...+..+|.+.+.+.+       ..+++++++|||++.++.....+.. ......+ ....++ .    ..+.+++
T Consensus       151 ----~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~-~----~~~~~~~  219 (255)
T PRK06057        151 ----QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-DPERAAR-RLVHVP-M----GRFAEPE  219 (255)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-CHHHHHH-HHhcCC-C----CCCcCHH
Confidence                1223456765444433       2389999999999987753221100 0000000 000111 1    1467899


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      |+++++..++.+... ..|+.+.+.++
T Consensus       220 ~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        220 EIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999888876543 34577777665

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.44  E-value=8.8e-13  Score=118.96  Aligned_cols=175  Identities=16%  Similarity=0.167  Sum_probs=114.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC-CCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++...       +... ++.++.+|   .+++.+++
T Consensus         1 ~~~~vlIt----Gas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dl~~~~~i~~~~   69 (257)
T PRK07024          1 MPLKVFIT----GASSGIGQALAREYARQGATLGLVARRTDALQAFAAR-------LPKAARVSVYAADVRDADALAAAA   69 (257)
T ss_pred             CCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-------cccCCeeEEEEcCCCCHHHHHHHH
Confidence            35789999    9999999999999999999999999986544322111       1000 34555555   55555544


Q ss_pred             cC----C-CccEEEeCCCC---------------------ChhhHHH----HHHHHHhCCCcEEEEecccc-ccCCCCCC
Q 018900          149 GG----V-TFDVVLDNNGK---------------------NLDAVRP----VADWAKSSGVKQFLFISSAG-IYKPADEP  197 (349)
Q Consensus       149 ~~----~-~~d~Vi~~a~~---------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~  197 (349)
                      +.    . .+|++||++|.                     |+.++.+    ++..+++.+..+||++||.. +++...  
T Consensus        70 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~--  147 (257)
T PRK07024         70 ADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG--  147 (257)
T ss_pred             HHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC--
Confidence            32    2 37999999883                     2233444    44466777778999999864 333221  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...+..+|...+.+.+       +.+++++++|||.+.++....             .....       ..++.
T Consensus       148 ------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~~-------~~~~~  201 (257)
T PRK07024        148 ------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------------NPYPM-------PFLMD  201 (257)
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-------------CCCCC-------CCccC
Confidence                  1124456777666553       348999999999998763211             00000       11357


Q ss_pred             HHHHHHHHHHHhcCCC
Q 018900          271 VRDLSSMLTLAVENPE  286 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~  286 (349)
                      .+|+++.++.++.+..
T Consensus       202 ~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        202 ADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            8999999999998653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.6e-12  Score=117.27  Aligned_cols=207  Identities=15%  Similarity=0.145  Sum_probs=121.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||.+++++|+++|++|+++.+......+....   ...++.  ...+.++.+|   .+++.++
T Consensus         7 ~~k~vlIt----Ga~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~D~~~~~~~~~~   79 (257)
T PRK12744          7 KGKVVLIA----GGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE---TVAAVKAAGAKAVAFQADLTTAAAVEKL   79 (257)
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH---HHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence            45799999    9999999999999999999988887653211110000   001111  1234455555   5666655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEe-cc-ccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFI-SS-AGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~-Ss-~~vy~~~~~~~  198 (349)
                      +...     ++|++||++|.                    |+.++..+++++...  ...+++++ || .+.+.+     
T Consensus        80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~-----  154 (257)
T PRK12744         80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP-----  154 (257)
T ss_pred             HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC-----
Confidence            5432     48999999993                    445555666665432  12356665 33 233321     


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....+..+|.+++.+.+..       +++++.++||.+..+...+......   ...... ...........+.+.
T Consensus       155 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~  226 (257)
T PRK12744        155 ----FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA---VAYHKT-AAALSPFSKTGLTDI  226 (257)
T ss_pred             ----CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch---hhcccc-cccccccccCCCCCH
Confidence                1123456788877766543       6899999999987653221100000   000000 000111111247789


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      +|+++++..++++....+|+++++.++.
T Consensus       227 ~dva~~~~~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        227 EDIVPFIRFLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             HHHHHHHHHhhcccceeecceEeecCCc
Confidence            9999999999986433356899998774

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.4e-12  Score=116.55  Aligned_cols=202  Identities=13%  Similarity=0.187  Sum_probs=123.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.+..+++....    .. ...++.++.+|   ++++.+++
T Consensus         8 ~~~~~vlIt----GasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l----~~-~~~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814          8 LDDQVAVVT----GAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQI----RA-AGRRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----Hh-cCCcEEEEEccCCCHHHHHHHH
Confidence            356899999    99999999999999999999999999865433211100    00 01234455555   56665555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh-----CCCcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS-----SGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~-----~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ...     ++|+|||+|+.                    |+.++.++++++..     .+..+||++||..-+...    
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----  154 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG----  154 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC----
Confidence            432     47999999983                    34566677776643     455789999995422111    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         .....+..+|..++.+.+..      .+++..++||.+..+...... -..+...+....+         ...+...
T Consensus       155 ---~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  222 (263)
T PRK07814        155 ---RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP---------LRRLGDP  222 (263)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC---------CCCCcCH
Confidence               11123445677766665543      467889999887654321100 0011111111111         1124578


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +|++++++.++..... ..|+.+.+.++
T Consensus       223 ~~va~~~~~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        223 EDIAAAAVYLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             HHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            9999999999976533 45577777665

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.43  E-value=3.2e-12  Score=115.65  Aligned_cols=199  Identities=14%  Similarity=0.221  Sum_probs=121.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++++|||    ||+|.||++++++|+++|++|++++|+.+...++..       ++ ...+.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~   72 (261)
T PRK08265          5 AGKVAIVT----GGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA-------SL-GERARFIATDITDDAAIERAVA   72 (261)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hh-CCeeEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998754332211       11 1234555555   566665554


Q ss_pred             CC-----CccEEEeCCCC-------------------ChhhHHHHHHHHHh---CCCcEEEEeccccc-cCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK-------------------NLDAVRPVADWAKS---SGVKQFLFISSAGI-YKPADEPPHVE  201 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~v-y~~~~~~~~~e  201 (349)
                      ..     ++|++||+++.                   |+.+...+++++..   .+..++|++||... ++...      
T Consensus        73 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------  146 (261)
T PRK08265         73 TVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG------  146 (261)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------
Confidence            32     47999999984                   33344444443321   33468999998653 33211      


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                        ...+..+|..++.+.+.       .++++..++||.+..+......  .......+..  .. .   +  ...+...+
T Consensus       147 --~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~--~~-~---p--~~r~~~p~  216 (261)
T PRK08265        147 --RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAA--PF-H---L--LGRVGDPE  216 (261)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhc--cc-C---C--CCCccCHH
Confidence              12234567666554432       3799999999987655321100  0000011100  00 0   0  11245789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++..+.. .+|+.+.+.++.
T Consensus       217 dva~~~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        217 EVAQVVAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHHHHHHcCccccCccCcEEEECCCe
Confidence            999999999986543 456888887764

>PRK07985 oxidoreductase; Provisional

Probab=99.43  E-value=1.5e-12  Score=119.91  Aligned_cols=202  Identities=16%  Similarity=0.170  Sum_probs=124.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC--cccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|+||++++++|+++|++|+++.|+.+.  .+++...    ..+ ....+.++.+|   .+++.++
T Consensus        48 ~~k~vlIT----Gas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~  118 (294)
T PRK07985         48 KDRKALVT----GGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI----IEE-CGRKAVLLPGDLSDEKFARSL  118 (294)
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH----HHH-cCCeEEEEEccCCCHHHHHHH
Confidence            45799999    999999999999999999999988765421  1111000    000 01123445555   5555544


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..     ++|++||+++.                     |+.++..+++++...  .-.+||++||...|.....   
T Consensus       119 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~---  195 (294)
T PRK07985        119 VHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH---  195 (294)
T ss_pred             HHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC---
Confidence            4322     37999999883                     345566666666432  1258999999876643211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...|..+|.+++.+.+    +   .|+++..++||++.++..... ........+....+.         ..+...
T Consensus       196 ----~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~r~~~p  262 (294)
T PRK07985        196 ----LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM---------KRAGQP  262 (294)
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC---------CCCCCH
Confidence                1224456766555443    2   489999999999998853211 111112222221111         124578


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++..+.. ..|+++.+.+|.
T Consensus       263 edva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        263 AELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            9999999999987543 456888888774

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.6e-12  Score=115.09  Aligned_cols=196  Identities=19%  Similarity=0.204  Sum_probs=123.6

Q ss_pred             EEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhhcCCC-
Q 018900           78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVGGVT-  152 (349)
Q Consensus        78 LVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~~~~~-  152 (349)
                      |||    ||+|++|++++++|+++|++|++++|+.+......       .++. ..+++++.+|   .+++.++++..+ 
T Consensus         1 lIt----Gas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   69 (230)
T PRK07041          1 LVV----GGSSGIGLALARAFAAEGARVTIASRSRDRLAAAA-------RALGGGAPVRTAALDITDEAAVDAFFAEAGP   69 (230)
T ss_pred             Cee----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHhcCCceEEEEccCCCHHHHHHHHHhcCC
Confidence            689    99999999999999999999999999864332211       0110 1234555555   677777777654 


Q ss_pred             ccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChH
Q 018900          153 FDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (349)
Q Consensus       153 ~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~  212 (349)
                      +|.+||+++.                    |+.+..++.++.+..+.++||++||.+.|.....       ...+..+|.
T Consensus        70 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~-------~~~Y~~sK~  142 (230)
T PRK07041         70 FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSAS-------GVLQGAINA  142 (230)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCc-------chHHHHHHH
Confidence            7999999983                    2334556666555445679999999877653211       112334676


Q ss_pred             HHHHHHHhh-----CCcEEEEecCceeeCCCCC---CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcC
Q 018900          213 QVEKYISEN-----FSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  284 (349)
Q Consensus       213 ~~ek~~~~~-----~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  284 (349)
                      .++.+.+..     +++++.++|+.+-.+....   .....++.......+.         ..+...+|+|++++.++.+
T Consensus       143 a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~  213 (230)
T PRK07041        143 ALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAAN  213 (230)
T ss_pred             HHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcC
Confidence            766665543     5678888888775543111   0011112222221111         1134679999999999986


Q ss_pred             CCccCCCEEEeeCCCcc
Q 018900          285 PEAASSNIFNLVSDRAV  301 (349)
Q Consensus       285 ~~~~~~~~~~i~~~~~~  301 (349)
                      .. .+|++|++.+|+.+
T Consensus       214 ~~-~~G~~~~v~gg~~~  229 (230)
T PRK07041        214 GF-TTGSTVLVDGGHAI  229 (230)
T ss_pred             CC-cCCcEEEeCCCeec
Confidence            53 34589999887643

>PRK12743 oxidoreductase; Provisional

Probab=99.42  E-value=1.9e-12  Score=116.63  Aligned_cols=199  Identities=14%  Similarity=0.107  Sum_probs=120.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      |+++||||    ||+|+||++++++|+++|++|+++.|.. +....+.       .++.  ...+.++.+|   ++++..
T Consensus         1 ~~k~vlIt----Gas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (256)
T PRK12743          1 MAQVAIVT----ASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA-------EEVRSHGVRAEIRQLDLSDLPEGAQ   69 (256)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHH
Confidence            46789999    9999999999999999999999887643 2221111       0111  1234555565   555544


Q ss_pred             hhcC----C-CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CcEEEEeccccccCCCCC
Q 018900          147 VVGG----V-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~----~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~g-v~~~i~~Ss~~vy~~~~~  196 (349)
                      +++.    . ++|+|||+++.                    |+.+...+++++..    .+ -.+||++||........ 
T Consensus        70 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-  148 (256)
T PRK12743         70 ALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP-  148 (256)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC-
Confidence            4432    1 47999999983                    34445555554433    22 35899999964321111 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ....+..+|.+++.+.+.       .+++++.++||.+..+...... .........+.++         ..+.
T Consensus       149 ------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~~~~~~~~~~~~~---------~~~~  212 (256)
T PRK12743        149 ------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-SDVKPDSRPGIPL---------GRPG  212 (256)
T ss_pred             ------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-hHHHHHHHhcCCC---------CCCC
Confidence                  112233467666655432       3799999999999887543211 1111111111111         1134


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+++++..++..... .+|+++.+.++.
T Consensus       213 ~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        213 DTHEIASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            789999999998876543 356888888774

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.42  E-value=2.4e-12  Score=115.80  Aligned_cols=199  Identities=17%  Similarity=0.212  Sum_probs=123.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      .++++|||    ||+|.||++++++|+++|++|++++|+.+...++.       .++..  ..+..+.+|   .+++.++
T Consensus         8 ~~k~~lIt----Gas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~~   76 (254)
T PRK08085          8 AGKNILIT----GSAQGIGFLLATGLAEYGAEIIINDITAERAELAV-------AKLRQEGIKAHAAPFNVTHKQEVEAA   76 (254)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-------HHHHhcCCeEEEEecCCCCHHHHHHH
Confidence            46789999    99999999999999999999999999865433221       11111  123344444   5555555


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccc-cCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGI-YKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~v-y~~~~~~  197 (349)
                      +...     ++|+|||+++.                    |+.+...+++    .+++.+..+||++||... ++..   
T Consensus        77 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  153 (254)
T PRK08085         77 IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD---  153 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC---
Confidence            4321     37999999983                    2233334444    444455679999999643 2211   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                           ....+..+|...+.+.+.       .|+++..++||++..+...... ...+...+....++         ..+.
T Consensus       154 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~  219 (254)
T PRK08085        154 -----TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA---------ARWG  219 (254)
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC---------CCCc
Confidence                 112234567776665544       3899999999999887432210 01111222222111         2356


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+|++++++.++..... .+|++..+.+|.
T Consensus       220 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        220 DPQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            789999999998886543 456777777664

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.4e-12  Score=117.70  Aligned_cols=204  Identities=14%  Similarity=0.151  Sum_probs=123.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..++.....    .+. ....+.++.+|   ++++..++
T Consensus         6 ~~k~vlVt----Gas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          6 AGKVALVT----GAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAI----ARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----HhccCCceEEEEEccCCCHHHHHHHH
Confidence            46889999    99999999999999999999999999765443221110    000 11234455555   55565555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|++||++|.                    |+.+...+++    .+++.+..++|++||...+....    
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  153 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP----  153 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC----
Confidence            431     47999999983                    2344444444    34455567999999975433211    


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-----hHHHHHHHHhCCCcccCCCCCccee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                         ....+..+|.+++.+.+.       .|+++..++||.+-.+.....+     ............+.         ..
T Consensus       154 ---~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~r  221 (260)
T PRK07063        154 ---GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM---------KR  221 (260)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC---------CC
Confidence               111234567766655543       3789999999988654321100     00001111111111         12


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +...+|+|++++.++.++.. ..|+.+.+.+|..
T Consensus       222 ~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        222 IGRPEEVAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence            45789999999999887643 4568888877753

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.41  E-value=4.7e-12  Score=103.64  Aligned_cols=145  Identities=19%  Similarity=0.150  Sum_probs=110.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~  148 (349)
                      ..++|.++|.    ||||-+|+.+++++.+.+  -.|+++.|.+. .           +.-..+.+.....|.+.|++..
T Consensus        15 ~mq~~s~fvl----GAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-~-----------d~at~k~v~q~~vDf~Kl~~~a   78 (238)
T KOG4039|consen   15 RMQNMSGFVL----GATGLCGGGLLKHAQEAPQFSKVYAILRREL-P-----------DPATDKVVAQVEVDFSKLSQLA   78 (238)
T ss_pred             hhhccceEEE----eccccccHHHHHHHHhcccceeEEEEEeccC-C-----------CccccceeeeEEechHHHHHHH
Confidence            3467899999    999999999999999987  37999998751 1           1222334555566766666665


Q ss_pred             cCCC-ccEEEeCCC-------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHH
Q 018900          149 GGVT-FDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (349)
Q Consensus       149 ~~~~-~d~Vi~~a~-------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~  214 (349)
                      .+.+ +|+.+.+-|             +|-+....+.++||+.|+++|+++||.+...         +..+.+...|-++
T Consensus        79 ~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~---------sSrFlY~k~KGEv  149 (238)
T KOG4039|consen   79 TNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP---------SSRFLYMKMKGEV  149 (238)
T ss_pred             hhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc---------ccceeeeeccchh
Confidence            5443 799998766             3567788999999999999999999987633         3334455688999


Q ss_pred             HHHHHhhCC-cEEEEecCceeeCCCCC
Q 018900          215 EKYISENFS-NWASFRPQYMIGSGNNK  240 (349)
Q Consensus       215 ek~~~~~~~-~~~ilR~~~v~g~~~~~  240 (349)
                      |+-+.+..+ .++|+|||.+.|.+...
T Consensus       150 E~~v~eL~F~~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  150 ERDVIELDFKHIIILRPGPLLGERTES  176 (238)
T ss_pred             hhhhhhccccEEEEecCcceecccccc
Confidence            999988854 69999999999987654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=5e-12  Score=113.29  Aligned_cols=199  Identities=14%  Similarity=0.177  Sum_probs=124.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++++|||    ||+|+||..+++.|+++|++|++++|+.+........    +.+ ....+..+.+|   .++++++++
T Consensus         4 ~~~~~lIt----G~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   74 (253)
T PRK08217          4 KDKVIVIT----GGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAE----CGA-LGTEVRGYAANVTDEEDVEATFA   74 (253)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCceEEEEcCCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999976433221100    000 01234445555   455555444


Q ss_pred             CC-----CccEEEeCCCCC-----------------------------hhhHH----HHHHHHHhC-CCcEEEEeccccc
Q 018900          150 GV-----TFDVVLDNNGKN-----------------------------LDAVR----PVADWAKSS-GVKQFLFISSAGI  190 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~~-----------------------------~~~~~----~ll~~a~~~-gv~~~i~~Ss~~v  190 (349)
                      ..     ++|+|||++|..                             +.+..    .++..+.+. .-.++|++||.+.
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~  154 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR  154 (253)
T ss_pred             HHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence            32     479999999831                             11121    233334333 2357999999877


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      |+....        ..+..+|.+.+.+++.       .+++++.++|+.+.++.... ..+.+........+.       
T Consensus       155 ~~~~~~--------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~~-------  218 (253)
T PRK08217        155 AGNMGQ--------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-MKPEALERLEKMIPV-------  218 (253)
T ss_pred             cCCCCC--------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-cCHHHHHHHHhcCCc-------
Confidence            654321        2234567776665432       37999999999998775432 222333333333222       


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                        ..+.+.+|+++++..++... ..+|++|++.++.
T Consensus       219 --~~~~~~~~~a~~~~~l~~~~-~~~g~~~~~~gg~  251 (253)
T PRK08217        219 --GRLGEPEEIAHTVRFIIEND-YVTGRVLEIDGGL  251 (253)
T ss_pred             --CCCcCHHHHHHHHHHHHcCC-CcCCcEEEeCCCc
Confidence              23458899999999999754 3356899998864

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.41  E-value=3.9e-12  Score=114.46  Aligned_cols=203  Identities=13%  Similarity=0.088  Sum_probs=124.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++++|||    ||+|.||.+++++|.++|++|++++|+++..+++...    +... ..++.++.+|   ++++.++++
T Consensus         5 ~~k~~lIt----Gas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T PRK07478          5 NGKVAIIT----GASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAE----IRAE-GGEAVALAGDVRDEAYAKALVA   75 (254)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhc-CCcEEEEEcCCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987544322110    0000 1134455555   555555554


Q ss_pred             CC-----CccEEEeCCCC---------------------Ch----hhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|++||++|.                     |+    ..++.++..+++.+..++|++||...+....  + 
T Consensus        76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--~-  152 (254)
T PRK07478         76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF--P-  152 (254)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC--C-
Confidence            22     48999999983                     11    1244456666666677999999965442111  0 


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ....+..+|.+++.+.+.       .++++..++||.+-.+..... ........+....+         ...+...
T Consensus       153 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  220 (254)
T PRK07478        153 ---GMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA---------LKRMAQP  220 (254)
T ss_pred             ---CcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------CCCCcCH
Confidence               112344567776554443       278999999999866532110 00111111111111         1124578


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+++.++.++.++.. .+|+++.+.++.
T Consensus       221 ~~va~~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        221 EEIAQAALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence            9999999999876543 456888887664

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.41  E-value=3.1e-12  Score=116.22  Aligned_cols=183  Identities=14%  Similarity=0.126  Sum_probs=112.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+..+...       .++.  ...+.++.+|   .+++.+++.
T Consensus         1 ~~vlVt----GasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~~~~   69 (270)
T PRK05650          1 NRVMIT----GAASGLGRAIALRWAREGWRLALADVNEEGGEETL-------KLLREAGGDGFYQRCDVRDYSQLTALAQ   69 (270)
T ss_pred             CEEEEe----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            479999    99999999999999999999999999865433211       1111  1234445555   555555554


Q ss_pred             C-----CCccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~-----~~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      .     .++|+|||++|.                    |+.    .++.++..+++.+..+||++||...+.....    
T Consensus        70 ~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----  145 (270)
T PRK05650         70 ACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA----  145 (270)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC----
Confidence            2     248999999983                    222    2344556677777789999999765432211    


Q ss_pred             CCCCCCCCCChHHHHHH----HHh---hCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKY----ISE---NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~----~~~---~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ...+..+|...+.+    ..+   .++++++++|+.+..+.....  ...... ......         ....++++
T Consensus       146 ---~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~  212 (270)
T PRK05650        146 ---MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMK-AQVGKL---------LEKSPITA  212 (270)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHH-HHHHHH---------hhcCCCCH
Confidence               11222345543322    222   389999999999987643221  000000 000000         01235789


Q ss_pred             HHHHHHHHHHhcCC
Q 018900          272 RDLSSMLTLAVENP  285 (349)
Q Consensus       272 ~Dva~~~~~~~~~~  285 (349)
                      +|+|+.++.++++.
T Consensus       213 ~~vA~~i~~~l~~~  226 (270)
T PRK05650        213 ADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.41  E-value=3e-12  Score=114.99  Aligned_cols=202  Identities=11%  Similarity=0.115  Sum_probs=123.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.+..+.+...    +.+. ...+..+.+|   .++++.++
T Consensus         6 l~~k~vlIt----Gas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~   76 (252)
T PRK07035          6 LTGKIALVT----GASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADA----IVAA-GGKAEALACHIGEMEQIDALF   76 (252)
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhc-CCeEEEEEcCCCCHHHHHHHH
Confidence            346789999    9999999999999999999999999976443322110    0000 0122334444   55555554


Q ss_pred             cCC-----CccEEEeCCCC---------------------ChhhHH----HHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK---------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~---------------------~~~~~~----~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|+|||+++.                     |+.+..    .+++.+++.+..++|++||...+....   
T Consensus        77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  153 (252)
T PRK07035         77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD---  153 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC---
Confidence            432     37999999983                     223333    344455666677999999864332211   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ....+..+|.+++.+++..       |+++..+.||.+..+...... -..+........+.         ..+..
T Consensus       154 ----~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  220 (252)
T PRK07035        154 ----FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL---------RRHAE  220 (252)
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC---------CCcCC
Confidence                1123445788877766543       799999999988654322110 01112222221111         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .+|+|+.+..++.+... .+|+++++.++
T Consensus       221 ~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        221 PSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            89999999999987644 35688888765

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.41  E-value=4e-12  Score=113.51  Aligned_cols=172  Identities=16%  Similarity=0.124  Sum_probs=115.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |++||||    ||+|+||++++++|+++|++|++++|+.+..+++...         ..++.++.+|   .+++.++++.
T Consensus         1 ~~~vlIt----Gas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   67 (240)
T PRK06101          1 MTAVLIT----GATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ---------SANIFTLAFDVTDHPGTKAALSQ   67 (240)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---------cCCCeEEEeeCCCHHHHHHHHHh
Confidence            4689999    9999999999999999999999999986544322111         0134444444   7777777765


Q ss_pred             C--CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEecccc-ccCCCCCCCCCCCCCC
Q 018900          151 V--TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAG-IYKPADEPPHVEGDVV  205 (349)
Q Consensus       151 ~--~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~-vy~~~~~~~~~e~~~~  205 (349)
                      .  .+|.+||+++.                    |+.++.++++++...  +..++|++||.. .++...        ..
T Consensus        68 ~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~  139 (240)
T PRK06101         68 LPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR--------AE  139 (240)
T ss_pred             cccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC--------Cc
Confidence            4  36889988862                    345577777776642  235799988853 333211        11


Q ss_pred             CCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          206 KPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       206 ~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      .|..+|..++.+.+       +.+++++++|||.++++.....             ....       ...+..+|+++.+
T Consensus       140 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-------------~~~~-------~~~~~~~~~a~~i  199 (240)
T PRK06101        140 AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-------------TFAM-------PMIITVEQASQEI  199 (240)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-------------CCCC-------CcccCHHHHHHHH
Confidence            34457777666543       3489999999999988643211             0000       1136899999999


Q ss_pred             HHHhcCCC
Q 018900          279 TLAVENPE  286 (349)
Q Consensus       279 ~~~~~~~~  286 (349)
                      +.+++...
T Consensus       200 ~~~i~~~~  207 (240)
T PRK06101        200 RAQLARGK  207 (240)
T ss_pred             HHHHhcCC
Confidence            99999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.41  E-value=2.2e-12  Score=116.13  Aligned_cols=202  Identities=17%  Similarity=0.174  Sum_probs=120.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+..+++...    +.. ...++.++.+|   .+++.+++
T Consensus         7 ~~~k~ilIt----Gasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~   77 (258)
T PRK06949          7 LEGKVALVT----GASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAE----IEA-EGGAAHVVSLDVTDYQSIKAAV   77 (258)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEecCCCHHHHHHHH
Confidence            456899999    9999999999999999999999999987544322110    000 01134455555   55565555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC--------CcEEEEecccccc
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG--------VKQFLFISSAGIY  191 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~g--------v~~~i~~Ss~~vy  191 (349)
                      +..     ++|+|||+++.                    |+.+..++++++.    +..        ..++|++||...+
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  157 (258)
T PRK06949         78 AHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL  157 (258)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence            432     47999999983                    2334444444332    222        3589999997654


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .....       ...+..+|...+.+.+.       .++++.++|||+++++.............+.+--+.        
T Consensus       158 ~~~~~-------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--------  222 (258)
T PRK06949        158 RVLPQ-------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPR--------  222 (258)
T ss_pred             CCCCC-------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCC--------
Confidence            32211       11123355554444432       379999999999998764321111111111111111        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                       ..+...+|+++++..++..... .+|..+.+.++
T Consensus       223 -~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        223 -KRVGKPEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             -CCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence             1244579999999999886542 45566666554

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.8e-12  Score=115.83  Aligned_cols=176  Identities=16%  Similarity=0.172  Sum_probs=113.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+|+||    ||+|+||++++++|+++|++|++++|+.+..+.....    .......++.++.+|   ++++.++++.
T Consensus         1 ~~~vlIt----Gas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          1 MKKILII----GATSDIARACARRYAAAGARLYLAARDVERLERLADD----LRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH----HHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            5789999    9999999999999999999999999987543321100    000111245566666   5666666554


Q ss_pred             C--CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccc-cCCCCCCCCCCCC
Q 018900          151 V--TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGI-YKPADEPPHVEGD  203 (349)
Q Consensus       151 ~--~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~v-y~~~~~~~~~e~~  203 (349)
                      .  ++|.|||++|.                    |+.+..+++++    +++.+..+||++||... ++..        .
T Consensus        73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------~  144 (243)
T PRK07102         73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA--------S  144 (243)
T ss_pred             HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC--------C
Confidence            3  36999999883                    34445555554    44456789999998642 2211        1


Q ss_pred             CCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          204 VVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      ...+..+|.+.+.+.+       +.|+++..++|+.+.++....             ..  .+.     .-++..+|+++
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-------------~~--~~~-----~~~~~~~~~a~  204 (243)
T PRK07102        145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-------------LK--LPG-----PLTAQPEEVAK  204 (243)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-------------cC--CCc-----cccCCHHHHHH
Confidence            1223446666544443       338999999999988753211             11  111     12467899999


Q ss_pred             HHHHHhcCC
Q 018900          277 MLTLAVENP  285 (349)
Q Consensus       277 ~~~~~~~~~  285 (349)
                      .++.+++.+
T Consensus       205 ~i~~~~~~~  213 (243)
T PRK07102        205 DIFRAIEKG  213 (243)
T ss_pred             HHHHHHhCC
Confidence            999999965

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.40  E-value=5.9e-12  Score=107.29  Aligned_cols=203  Identities=18%  Similarity=0.218  Sum_probs=131.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh--hh-HHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AE-VGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~-l~~~~~~  150 (349)
                      -.++|+.    |+.||.|.++++.....++.|..+.|+..+.-          .+-....+.+..+|.  .. ++..+.+
T Consensus        52 ~e~tlvl----ggnpfsgs~vlk~A~~vv~svgilsen~~k~~----------l~sw~~~vswh~gnsfssn~~k~~l~g  117 (283)
T KOG4288|consen   52 VEWTLVL----GGNPFSGSEVLKNATNVVHSVGILSENENKQT----------LSSWPTYVSWHRGNSFSSNPNKLKLSG  117 (283)
T ss_pred             HHHHhhh----cCCCcchHHHHHHHHhhceeeeEeecccCcch----------hhCCCcccchhhccccccCcchhhhcC
Confidence            3579999    99999999999999999999999999863111          111112233333441  11 2333333


Q ss_pred             CCccEEEeCCC----------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh
Q 018900          151 VTFDVVLDNNG----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (349)
Q Consensus       151 ~~~d~Vi~~a~----------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~  220 (349)
                        +..++.+.+          +|-+...+-+.++.++|+++|+|+|... ||-   .++.   +..+-.+|+++|..+..
T Consensus       118 --~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~---~~~i---~rGY~~gKR~AE~Ell~  188 (283)
T KOG4288|consen  118 --PTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL---PPLI---PRGYIEGKREAEAELLK  188 (283)
T ss_pred             --CcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC---CCcc---chhhhccchHHHHHHHH
Confidence              366666555          3455667778899999999999999643 221   1222   22233479999887665


Q ss_pred             -hCCcEEEEecCceeeCCCCCC------chHHHHHHHHhCC-----CcccCCCCCcceeeeeHHHHHHHHHHHhcCCCcc
Q 018900          221 -NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKR-----PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (349)
Q Consensus       221 -~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  288 (349)
                       +..+-+++|||+|||.+.-..      .+...++.+.+..     .+++.  +.....++.++++|.+++.++++|+-.
T Consensus       189 ~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f~  266 (283)
T KOG4288|consen  189 KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDFK  266 (283)
T ss_pred             hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCcC
Confidence             578899999999999854433      1222233333322     23444  345678999999999999999999763


Q ss_pred             CCCEEEeeCCCccCHHHHHHHHH
Q 018900          289 SSNIFNLVSDRAVTLDGMAKLCA  311 (349)
Q Consensus       289 ~~~~~~i~~~~~~t~~el~~~~~  311 (349)
                      +  +        +++.|+.++-.
T Consensus       267 G--v--------v~i~eI~~~a~  279 (283)
T KOG4288|consen  267 G--V--------VTIEEIKKAAH  279 (283)
T ss_pred             c--e--------eeHHHHHHHHH
Confidence            2  3        55666655443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.40  E-value=1.6e-11  Score=109.20  Aligned_cols=193  Identities=13%  Similarity=0.190  Sum_probs=118.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+|++|||    ||+|.||++++++|+++|++|++++|+.+...          .++...++.++.+|   .+++.+++.
T Consensus         1 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~D~~~~~~~~~~~~   66 (236)
T PRK06483          1 MPAPILIT----GAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI----------DGLRQAGAQCIQADFSTNAGIMAFID   66 (236)
T ss_pred             CCceEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCchhHH----------HHHHHcCCEEEEcCCCCHHHHHHHHH
Confidence            56799999    99999999999999999999999999764321          11112234555555   455555443


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhH----HHHHHHHHhCC--CcEEEEeccccccCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSG--VKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ..     ++|++||++|.                    |+.+.    +.++..+++.+  ..++|++||.......    
T Consensus        67 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----  142 (236)
T PRK06483         67 ELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS----  142 (236)
T ss_pred             HHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC----
Confidence            32     38999999983                    12222    33444555444  4689999985432111    


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         .....|..+|.+.+.+.+..      ++++..++||.+.-.....   ......+....++.         -+...+
T Consensus       143 ---~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~  207 (236)
T PRK06483        143 ---DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEE  207 (236)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHH
Confidence               11223445777776665432      5889999999874322111   11122222222211         123679


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      |+++++..++.. ...+|+++.+.+|.
T Consensus       208 ~va~~~~~l~~~-~~~~G~~i~vdgg~  233 (236)
T PRK06483        208 EIIDLVDYLLTS-CYVTGRSLPVDGGR  233 (236)
T ss_pred             HHHHHHHHHhcC-CCcCCcEEEeCccc
Confidence            999999999974 33456888887764

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3e-12  Score=116.57  Aligned_cols=193  Identities=20%  Similarity=0.152  Sum_probs=113.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||+|++|++++++|+++|++|++++|+.+....+           ...++..+.+|   .+++.++++.
T Consensus         1 mk~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~   65 (274)
T PRK05693          1 MPVVLIT----GCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-----------AAAGFTAVQLDVNDGAALARLAEE   65 (274)
T ss_pred             CCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHCCCeEEEeeCCCHHHHHHHHHH
Confidence            5789999    9999999999999999999999999986543221           12234445555   5666655543


Q ss_pred             C-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      .     ++|+|||++|.                    |+.++.++++++    ++ +..++|++||...+...   +.  
T Consensus        66 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~---~~--  139 (274)
T PRK05693         66 LEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVT---PF--  139 (274)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCC---CC--
Confidence            2     48999999983                    233444455543    33 34689999985432211   11  


Q ss_pred             CCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCC-Ccc---------cCCCCCc
Q 018900          202 GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVP---------IPGSGMQ  264 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~  264 (349)
                        ...+..+|...+.+.+       ..|+++++++||.+..+......  .......... +..         .....  
T Consensus       140 --~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  213 (274)
T PRK05693        140 --AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNAS--REAEQLLAEQSPWWPLREHIQARARASQ--  213 (274)
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccc--cchhhcCCCCCccHHHHHHHHHHHHhcc--
Confidence              1123345666555432       24899999999999765322100  0000000000 000         00000  


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCccCCCEEEee
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~  296 (349)
                       ......+|+|+.++.+++.+...  ..+.++
T Consensus       214 -~~~~~~~~~a~~i~~~~~~~~~~--~~~~~g  242 (274)
T PRK05693        214 -DNPTPAAEFARQLLAAVQQSPRP--RLVRLG  242 (274)
T ss_pred             -CCCCCHHHHHHHHHHHHhCCCCC--ceEEec
Confidence             11357899999999999876541  245554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.39  E-value=6.8e-12  Score=114.47  Aligned_cols=200  Identities=18%  Similarity=0.229  Sum_probs=125.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      .++++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.       .++.  ..++..+.+|   .+++..+
T Consensus         9 ~~k~vlVt----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~v~~~   77 (278)
T PRK08277          9 KGKVAVIT----GGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVV-------AEIKAAGGEALAVKADVLDKESLEQA   77 (278)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            45789999    99999999999999999999999999864433211       1111  1134455665   4555555


Q ss_pred             hcCC-----CccEEEeCCCCC-----------------------------------hhh----HHHHHHHHHhCCCcEEE
Q 018900          148 VGGV-----TFDVVLDNNGKN-----------------------------------LDA----VRPVADWAKSSGVKQFL  183 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~-----------------------------------~~~----~~~ll~~a~~~gv~~~i  183 (349)
                      ++..     ++|+|||+++..                                   +.+    .+.++..+++.+..+||
T Consensus        78 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii  157 (278)
T PRK08277         78 RQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNII  157 (278)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence            4421     479999999831                                   111    22445556666667999


Q ss_pred             EeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc------hHHHHHHH
Q 018900          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC------EEWFFDRI  250 (349)
Q Consensus       184 ~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~  250 (349)
                      ++||...+.....       ...+..+|.+++.+.+.       .++++..++||.+..+......      .......+
T Consensus       158 ~isS~~~~~~~~~-------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  230 (278)
T PRK08277        158 NISSMNAFTPLTK-------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKI  230 (278)
T ss_pred             EEccchhcCCCCC-------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHH
Confidence            9999876653221       12244567776665543       2799999999999887432100      00111111


Q ss_pred             HhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcC-CCc-cCCCEEEeeCCC
Q 018900          251 VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PEA-ASSNIFNLVSDR  299 (349)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~~~-~~~~~~~i~~~~  299 (349)
                      ....+         ...+...+|+|++++.++.+ ... .+|+++.+.+|.
T Consensus       231 ~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        231 LAHTP---------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             hccCC---------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence            11111         12255789999999998887 433 456888887763

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.39  E-value=4.6e-12  Score=112.82  Aligned_cols=199  Identities=18%  Similarity=0.217  Sum_probs=120.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC-CCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |.+|||    ||+|++|++++++|+++|++|+++.|. .+...+...    .. ......+.++.+|   ++++.+++++
T Consensus         1 k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (242)
T TIGR01829         1 RIALVT----GGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQ----EQ-GALGFDFRVVEGDVSSFESCKAAVAK   71 (242)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH----HH-HhhCCceEEEEecCCCHHHHHHHHHH
Confidence            579999    999999999999999999999999883 221111000    00 0011234555665   4555544432


Q ss_pred             -----CCccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 -----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 -----~~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                           .++|+|||+++.                    |+.+    ++.++..+++.+.++||++||........      
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~------  145 (242)
T TIGR01829        72 VEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQF------  145 (242)
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC------
Confidence                 137999999983                    2233    33356666777788999999854321111      


Q ss_pred             CCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          202 GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                       ....+..+|...+.+++       ..++++..++|+.+.++.... +...+...+....+.         ..+...+|+
T Consensus       146 -~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~  214 (242)
T TIGR01829       146 -GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA-MREDVLNSIVAQIPV---------GRLGRPEEI  214 (242)
T ss_pred             -CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc-cchHHHHHHHhcCCC---------CCCcCHHHH
Confidence             11123345554443332       238999999999998775432 122233333332221         123456899


Q ss_pred             HHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          275 SSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       275 a~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++++..++.++.. ..|+.+.+.++.
T Consensus       215 a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       215 AAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHHHHHcCchhcCccCCEEEecCCc
Confidence            9999888876533 456889888874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.39  E-value=1.5e-12  Score=116.61  Aligned_cols=179  Identities=17%  Similarity=0.194  Sum_probs=112.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++.....   .......+.++.+|   .+++.++++
T Consensus         1 ~~k~vlIt----Gas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (248)
T PRK08251          1 TRQKILIT----GASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELL---ARYPGIKVAVAALDVNDHDQVFEVFA   73 (248)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH---hhCCCceEEEEEcCCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998754432211000   00001234555666   555555544


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEecccc-ccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                      ..     ++|+|||++|.                    |+.+..++++    .+++.+..+||++||.. +++...    
T Consensus        74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  149 (248)
T PRK08251         74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG----  149 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC----
Confidence            22     37999999983                    2333444444    44566778999999954 333221    


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         ....+..+|..++.+.+.       .++++++++||++..+....         . ..           ....++.+
T Consensus       150 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---------~-~~-----------~~~~~~~~  205 (248)
T PRK08251        150 ---VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK---------A-KS-----------TPFMVDTE  205 (248)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc---------c-cc-----------CCccCCHH
Confidence               011234467666554432       26899999999986643211         0 00           01247889


Q ss_pred             HHHHHHHHHhcCCC
Q 018900          273 DLSSMLTLAVENPE  286 (349)
Q Consensus       273 Dva~~~~~~~~~~~  286 (349)
                      |.++.++.+++...
T Consensus       206 ~~a~~i~~~~~~~~  219 (248)
T PRK08251        206 TGVKALVKAIEKEP  219 (248)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999998654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.39  E-value=4.7e-12  Score=113.78  Aligned_cols=202  Identities=16%  Similarity=0.134  Sum_probs=124.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+....    +.+ ....+..+.+|   .+++..+++
T Consensus         6 ~~k~ilIt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~i~~~~~   76 (253)
T PRK06172          6 SGKVALVT----GGAAGIGRATALAFAREGAKVVVADRDAAGGEETVAL----IRE-AGGEALFVACDVTRDAEVKALVE   76 (253)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHh-cCCceEEEEcCCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987543321110    000 11235556666   455555544


Q ss_pred             CC-----CccEEEeCCCC---------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||+++.                     |+.+.    +.++..+++.+..++|++||...+.....   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  153 (253)
T PRK06172         77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK---  153 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC---
Confidence            32     47999999983                     12222    23344455555679999999776554221   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ...+..+|.+.+.+.+.       .++++..++||.+-.+......  .......+....+.         ..+..
T Consensus       154 ----~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  220 (253)
T PRK06172        154 ----MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV---------GRIGK  220 (253)
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC---------CCccC
Confidence                12244567766555433       2789999999988554321100  01111111111111         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+++.++.++.+... .+|+.+.+.++.
T Consensus       221 p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        221 VEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            89999999999987543 466888888774

>PRK12742 oxidoreductase; Provisional

Probab=99.39  E-value=1.6e-11  Score=109.12  Aligned_cols=195  Identities=16%  Similarity=0.202  Sum_probs=118.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|.||++++++|+++|++|+++.|.. +..+++..          ..++..+.+|   .+.+.+.+
T Consensus         5 ~~k~vlIt----GasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----------~~~~~~~~~D~~~~~~~~~~~   70 (237)
T PRK12742          5 TGKKVLVL----GGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ----------ETGATAVQTDSADRDAVIDVV   70 (237)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----------HhCCeEEecCCCCHHHHHHHH
Confidence            46899999    9999999999999999999998887643 22211100          0123445555   45566666


Q ss_pred             cCC-CccEEEeCCCC--------------------ChhhHHHHHHHHHh-C-CCcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          149 GGV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS-S-GVKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       149 ~~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~-~-gv~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      ... ++|++||+++.                    |+.+...++..+.. . +..++|++||......    +.  ....
T Consensus        71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~--~~~~  144 (237)
T PRK12742         71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM----PV--AGMA  144 (237)
T ss_pred             HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC----CC--CCCc
Confidence            543 38999999983                    23334444333222 1 2358999999643111    11  1112


Q ss_pred             CCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          206 KPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       206 ~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      .|..+|.+++.+.+.       .++++.+++||.+..+......  ...+.+....++         ..+.+.+|+++++
T Consensus       145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~---------~~~~~p~~~a~~~  213 (237)
T PRK12742        145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--PMKDMMHSFMAI---------KRHGRPEEVAGMV  213 (237)
T ss_pred             chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--HHHHHHHhcCCC---------CCCCCHHHHHHHH
Confidence            344578777765543       3799999999998765432210  111112111111         1246789999999


Q ss_pred             HHHhcCCCc-cCCCEEEeeCC
Q 018900          279 TLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       279 ~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ..++.+... ..|..+.+.++
T Consensus       214 ~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        214 AWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             HHHcCcccCcccCCEEEeCCC
Confidence            999876543 35678877665

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.39  E-value=1e-11  Score=112.25  Aligned_cols=200  Identities=15%  Similarity=0.188  Sum_probs=121.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+... ..       .++.  ...+.++.+|   +++++++
T Consensus         5 ~~~~~lIt----G~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~-~~-------~~~~~~~~~~~~~~~Dl~~~~~v~~~   72 (263)
T PRK08226          5 TGKTALIT----GALQGIGEGIARVFARHGANLILLDISPEIEK-LA-------DELCGRGHRCTAVVADVRDPASVAAA   72 (263)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEecCCHHHHH-HH-------HHHHHhCCceEEEECCCCCHHHHHHH
Confidence            45899999    99999999999999999999999999753111 00       0111  1234455565   5566655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +...     ++|+|||+++.                    |+.+...+++++    ++.+..+||++||........   
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  149 (263)
T PRK08226         73 IKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD---  149 (263)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC---
Confidence            5432     47999999993                    344555555554    344557899999854211000   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-------CchHHHHHHHHhCCCcccCCCCCc
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                         .....+..+|...+.+.+.       .++++..++||.+.++....       ....+++..+..+.++        
T Consensus       150 ---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------  218 (263)
T PRK08226        150 ---PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL--------  218 (263)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC--------
Confidence               0111233456665554432       27899999999988763211       0112223333322221        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                       ..+...+|+++++..++.... ..+|+++.+.++.
T Consensus       219 -~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        219 -RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             -CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence             124578999999988886543 3456777777663

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.6e-12  Score=115.42  Aligned_cols=201  Identities=17%  Similarity=0.196  Sum_probs=117.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      ++|++|||    ||+|+||++++++|.++|++|++..+ ..+...+..       .++..  ..+..+.+|   .+++..
T Consensus         3 ~~k~~lIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   71 (252)
T PRK12747          3 KGKVALVT----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-------YEIQSNGGSAFSIGANLESLHGVEA   71 (252)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHHHhcCCceEEEecccCCHHHHHH
Confidence            35799999    99999999999999999999988753 333222110       01111  112233334   333332


Q ss_pred             hhc----------C-CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          147 VVG----------G-VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       147 ~~~----------~-~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                      ++.          + .++|+|||+||.                    |+.++..+++++...  +..+||++||...+..
T Consensus        72 ~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~  151 (252)
T PRK12747         72 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  151 (252)
T ss_pred             HHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC
Confidence            221          1 158999999983                    344555555544332  2358999999765432


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..+       ...|..+|.+++.+.+.       .++++..+.||.+..+..................        ....
T Consensus       152 ~~~-------~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~  216 (252)
T PRK12747        152 LPD-------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFN  216 (252)
T ss_pred             CCC-------chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------Cccc
Confidence            211       12344567776655443       3899999999999877432110001111111110        0012


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+.+.+|+|+++..++..... ..|+.+.+.+|.
T Consensus       217 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        217 RLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             CCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            367899999999998876433 456888887764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2.7e-12  Score=116.27  Aligned_cols=206  Identities=12%  Similarity=0.185  Sum_probs=126.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||+|.||++++++|+++|++|++++|+.+..++....    +......++..+.+|   +++++++++
T Consensus         7 ~~k~~lIt----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          7 SGKLAFTT----ASSKGIGFGVARVLARAGADVILLSRNEENLKKAREK----IKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            46789999    9999999999999999999999999986544322110    000111234555555   556665554


Q ss_pred             CC----CccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          150 GV----TFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       150 ~~----~~d~Vi~~a~~--------------------~----~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      ..    ++|++||++|.                    |    +..++.++..+++.+..++|++||...+....      
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~------  152 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP------  152 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC------
Confidence            32    38999999983                    1    12356677777777778999999976543211      


Q ss_pred             CCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC----------chHHHHHHHHhCCCcccCCCCCc
Q 018900          202 GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                       ....+..+|.+.+.+.+       .+|+++..+.||.+..+.....          ......+.+....+         
T Consensus       153 -~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------  222 (263)
T PRK08339        153 -NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIP---------  222 (263)
T ss_pred             -cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCC---------
Confidence             11123345666544333       2489999999998865421100          00011111111111         


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      ...+...+|+|++++.++.++.. .+|+++.+.+|..++
T Consensus       223 ~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        223 LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            12256789999999999876543 456888888776443

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.9e-12  Score=121.37  Aligned_cols=190  Identities=15%  Similarity=0.193  Sum_probs=120.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      .+++||||    ||+|.||++++++|+++|++|++++|+.+..+++.       .++.  ...+.++.+|   .++++++
T Consensus         7 ~~k~vlIT----Gas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~-------~~l~~~g~~~~~v~~Dv~d~~~v~~~   75 (334)
T PRK07109          7 GRQVVVIT----GASAGVGRATARAFARRGAKVVLLARGEEGLEALA-------AEIRAAGGEALAVVADVADAEAVQAA   75 (334)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHHcCCcEEEEEecCCCHHHHHHH
Confidence            45789999    99999999999999999999999999865443221       1111  1123444555   5666655


Q ss_pred             hcCC-----CccEEEeCCCCC------------------------hhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGKN------------------------LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~------------------------~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|++||+++..                        +..++.++..+++.+..+||++||...|.....  
T Consensus        76 ~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~--  153 (334)
T PRK07109         76 ADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL--  153 (334)
T ss_pred             HHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc--
Confidence            4421     489999999841                        234566777777776789999999877653211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                           ...|..+|...+.+.+    |     .++++++++|+.+..+...     + ........+       .....+.
T Consensus       154 -----~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~-----~-~~~~~~~~~-------~~~~~~~  215 (334)
T PRK07109        154 -----QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD-----W-ARSRLPVEP-------QPVPPIY  215 (334)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh-----h-hhhhccccc-------cCCCCCC
Confidence                 1112335555443322    2     2689999999998665321     1 111111110       1112356


Q ss_pred             eHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          270 HVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                      ..+|+|++++.+++++.    +.+.++.
T Consensus       216 ~pe~vA~~i~~~~~~~~----~~~~vg~  239 (334)
T PRK07109        216 QPEVVADAILYAAEHPR----RELWVGG  239 (334)
T ss_pred             CHHHHHHHHHHHHhCCC----cEEEeCc
Confidence            89999999999999863    3455554

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.38  E-value=1.3e-11  Score=110.32  Aligned_cols=198  Identities=16%  Similarity=0.176  Sum_probs=119.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++.+|||    ||+|+||++++++|+++|++|+++.+.. ....+       ...++..  ..+..+.+|   .+++.++
T Consensus         3 ~k~~lVt----G~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (246)
T PRK12938          3 QRIAYVT----GGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVK-------WLEDQKALGFDFIASEGNVGDWDSTKAA   71 (246)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHH-------HHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            5789999    9999999999999999999988865432 11110       0111111  123334455   5555555


Q ss_pred             hcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+++.                    |+.+    ++.++..+++.+..+||++||........   
T Consensus        72 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  148 (246)
T PRK12938         72 FDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF---  148 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC---
Confidence            4421     47999999984                    2223    44456666677778999999854321110   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....+..+|...+.+.+.       .++++..++||.+..+.... ....++..+....+.         ..+...
T Consensus       149 ----~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~  214 (246)
T PRK12938        149 ----GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRLGSP  214 (246)
T ss_pred             ----CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCCc---------cCCcCH
Confidence                111233456654444332       37999999999998765322 112223333222221         124568


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+++++..++.++.. ..|+.+.+.++.
T Consensus       215 ~~v~~~~~~l~~~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        215 DEIGSIVAWLASEESGFSTGADFSLNGGL  243 (246)
T ss_pred             HHHHHHHHHHcCcccCCccCcEEEECCcc
Confidence            9999999998876533 456788887653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.7e-12  Score=114.21  Aligned_cols=201  Identities=14%  Similarity=0.205  Sum_probs=126.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++++|+||    ||+|.||++++++|.++|++ |++++|+.+......       .++.  ...+.++.+|   ++++.
T Consensus         4 ~~~k~vlIt----Ga~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~   72 (260)
T PRK06198          4 LDGKVALVT----GGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA-------AELEALGAKAVFVQADLSDVEDCR   72 (260)
T ss_pred             CCCcEEEEe----CCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-------HHHHhcCCeEEEEEccCCCHHHHH
Confidence            346889999    99999999999999999998 999999764332111       1111  1123344444   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|+|||+++.                    |+.+..++++++    ++.+ ..+||++||...++...
T Consensus        73 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~  152 (260)
T PRK06198         73 RVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP  152 (260)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC
Confidence            655432     47999999983                    234455555544    3332 35899999987665322


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC------CchHHHHHHHHhCCCcccCCCC
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~  262 (349)
                      .       ...+..+|..+|.+.+.       .+++++.++|++++++....      .....++.......+       
T Consensus       153 ~-------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------  218 (260)
T PRK06198        153 F-------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-------  218 (260)
T ss_pred             C-------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-------
Confidence            1       12244567776665543       26889999999998875321      001112222111111       


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                        ...+++.+|++++++.++.+... ..|+++++.++.
T Consensus       219 --~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        219 --FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             --ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence              12357899999999999876643 356888888764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.36  E-value=1.3e-11  Score=111.93  Aligned_cols=200  Identities=18%  Similarity=0.175  Sum_probs=124.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ..++++|||    ||+|.||++++++|+++|++|+++.|+.+...+..       .++.  ..++.++.+|   .+++.+
T Consensus         8 ~~~k~~lIt----Ga~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (265)
T PRK07097          8 LKGKIALIT----GASYGIGFAIAKAYAKAGATIVFNDINQELVDKGL-------AAYRELGIEAHGYVCDVTDEDGVQA   76 (265)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEcCCCCHHHHHH
Confidence            356889999    99999999999999999999999998765433211       1111  1134455565   555555


Q ss_pred             hhcC-----CCccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCcEEEEeccc-cccCCCCC
Q 018900          147 VVGG-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSA-GIYKPADE  196 (349)
Q Consensus       147 ~~~~-----~~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~-~vy~~~~~  196 (349)
                      ++..     .++|+|||++|.                    |+.+.    +.++..+++.+..+||++||. +.++..  
T Consensus        77 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  154 (265)
T PRK07097         77 MVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE--  154 (265)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC--
Confidence            5543     238999999983                    22333    344555566667799999985 333321  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-------hHHHHHHHHhCCCcccCCCC
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-------EEWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  262 (349)
                            ....+..+|..++.+.+.       .++++..++||.+..+......       ...+...+....+       
T Consensus       155 ------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  221 (265)
T PRK07097        155 ------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-------  221 (265)
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC-------
Confidence                  112234567666555443       3899999999999877432110       0001111111111       


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                        ...+...+|+|+.++.++.+.. ..+|+++.+.++.
T Consensus       222 --~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        222 --AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             --ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence              1124578999999999998753 3456788777764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.35  E-value=7.9e-12  Score=112.43  Aligned_cols=202  Identities=17%  Similarity=0.144  Sum_probs=123.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++++|||    ||+|.||.+++++|+++|++|++++|+.+..+++...    ... ...++..+.+|   ++++.++++
T Consensus         8 ~~k~vlVt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          8 HGKRALIT----GASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADE----IGT-SGGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHh-cCCeEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999986544322110    000 01123444555   556655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|++||+++.                    |+.+...+++++    ++.+ -.++|++||...+-..  .+ 
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~-  155 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--VP-  155 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--CC-
Confidence            22     48999999983                    334444444443    3333 2479999885421100  00 


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                        .....|..+|.+++.+.+.       .|+++..++||.+-.+.....  ......+....+.         ..+...+
T Consensus       156 --~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~--~~~~~~~~~~~~~---------~r~~~p~  222 (253)
T PRK05867        156 --QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY--TEYQPLWEPKIPL---------GRLGRPE  222 (253)
T ss_pred             --CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc--hHHHHHHHhcCCC---------CCCcCHH
Confidence              1112344577776665543       389999999999866543211  1112222222111         1246789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++..... .+|+++.+.+|.
T Consensus       223 ~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        223 ELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            999999999976543 456888888774

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.5e-11  Score=110.60  Aligned_cols=201  Identities=15%  Similarity=0.215  Sum_probs=121.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +|++|||    ||+|.||++++++|+++|++|++++|+.+...++...    +.+ ....+.++.+|   ++++.+++..
T Consensus         1 ~k~~lIt----G~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          1 EKVVIIT----GGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLE----IEQ-FPGQVLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEecCCCHHHHHHHHHH
Confidence            4689999    9999999999999999999999999986543322110    000 01234455555   5566555543


Q ss_pred             C-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      .     ++|+|||++|.                    |+.+..++++++    ++.+ ..+||++||...+....     
T Consensus        72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----  146 (252)
T PRK07677         72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP-----  146 (252)
T ss_pred             HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC-----
Confidence            2     47999999972                    334455566655    2322 36899999864322111     


Q ss_pred             CCCCCCCCCChHHHHHHHH--------hhCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          201 EGDVVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~--------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                        ....+..+|.+.+.+.+        .+|+++..++||.+.........  ...+.+.+.+..++         ..+..
T Consensus       147 --~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  215 (252)
T PRK07677        147 --GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGT  215 (252)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCC
Confidence              11223446766554433        23789999999998754321111  11122233222221         12457


Q ss_pred             HHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      .+|+++++..++..+. ..+|+.+.+.++.
T Consensus       216 ~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        216 PEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            8999999988887653 3456788887764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.35  E-value=4.9e-12  Score=116.50  Aligned_cols=180  Identities=14%  Similarity=0.168  Sum_probs=113.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++...    +... ...+.++.+|   .+++.++++
T Consensus        39 ~~k~vlIt----GasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~----l~~~-~~~~~~~~~Dl~d~~~v~~~~~  109 (293)
T PRK05866         39 TGKRILLT----GASSGIGEAAAEQFARRGATVVAVARREDLLDAVADR----ITRA-GGDAMAVPCDLSDLDAVDALVA  109 (293)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhc-CCcEEEEEccCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999987544322110    0000 1123344454   566666665


Q ss_pred             C----C-CccEEEeCCCCC----------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          150 G----V-TFDVVLDNNGKN----------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       150 ~----~-~~d~Vi~~a~~~----------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      .    . ++|+|||++|..                      +.+    ++.++..+++.+..++|++||.+++....  +
T Consensus       110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--p  187 (293)
T PRK05866        110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS--P  187 (293)
T ss_pred             HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC--C
Confidence            2    1 479999999842                      122    33344455667778999999977654211  1


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....+..+|.+++.+.+.       .+++++.++||.+-.+....         ...     .  .+   ...+..
T Consensus       188 ----~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~---------~~~-----~--~~---~~~~~p  244 (293)
T PRK05866        188 ----LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP---------TKA-----Y--DG---LPALTA  244 (293)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc---------ccc-----c--cC---CCCCCH
Confidence                112344567776554433       38999999999765543211         000     0  01   123688


Q ss_pred             HHHHHHHHHHhcCCC
Q 018900          272 RDLSSMLTLAVENPE  286 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~  286 (349)
                      +|+|+.++.++++..
T Consensus       245 e~vA~~~~~~~~~~~  259 (293)
T PRK05866        245 DEAAEWMVTAARTRP  259 (293)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999998753

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.8e-11  Score=113.41  Aligned_cols=112  Identities=16%  Similarity=0.148  Sum_probs=76.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+......   .......+.++.+|   .+++.+++.
T Consensus        15 ~~k~vlIt----Gas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~Dl~d~~~v~~~~~   87 (306)
T PRK06197         15 SGRVAVVT----GANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARIT---AATPGADVTLQELDLTSLASVRAAAD   87 (306)
T ss_pred             CCCEEEEc----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---HhCCCCceEEEECCCCCHHHHHHHHH
Confidence            56899999    999999999999999999999999997644321110000   00001234555666   555555543


Q ss_pred             CC-----CccEEEeCCCC------------------Chhh----HHHHHHHHHhCCCcEEEEecccccc
Q 018900          150 GV-----TFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIY  191 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy  191 (349)
                      ..     ++|+|||+||.                  |+.+    ++.+++.+++.+..+||++||.+.+
T Consensus        88 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~  156 (306)
T PRK06197         88 ALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR  156 (306)
T ss_pred             HHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence            21     48999999983                  3334    6677888877777899999997643

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.34  E-value=7.7e-12  Score=113.25  Aligned_cols=206  Identities=15%  Similarity=0.198  Sum_probs=121.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++.+|||    ||+|.||++++++|+++|++|++++|+.+...+........   .....+..+.+|   .+++.++++
T Consensus         7 ~~k~~lIt----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~   79 (265)
T PRK07062          7 EGRVAVVT----GGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREK---FPGARLLAARCDVLDEADVAAFAA   79 (265)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhh---CCCceEEEEEecCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999875443221110000   001123344444   555555443


Q ss_pred             CC-----CccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||++|.                    |+    ..++.++..+++.+..++|++||...+....     
T Consensus        80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  154 (265)
T PRK07062         80 AVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP-----  154 (265)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC-----
Confidence            21     37999999983                    11    2245555666666667999999965433211     


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCc---------hHHHHHHHHhCCCcccCCCCCc
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                        ....+..+|.+.+.+.+       +.|+++..++||.+..+.....+         ...+...+.....++       
T Consensus       155 --~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------  225 (265)
T PRK07062        155 --HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------  225 (265)
T ss_pred             --CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------
Confidence              11123335555433332       24899999999988665321100         001111111111111       


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      ...+...+|+|++++.++.+.. ..+|+++.+.+|.
T Consensus       226 ~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        226 LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            1124678999999999887643 3456888887763

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.8e-11  Score=110.34  Aligned_cols=180  Identities=13%  Similarity=0.159  Sum_probs=114.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCC-cccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      +..++||||    ||+|.||++++++|+++| ++|++++|+.+. .+++.+    .+......++.++.+|   .+++.+
T Consensus         6 ~~~~~vlIt----Gas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~----~l~~~~~~~v~~~~~D~~~~~~~~~   77 (253)
T PRK07904          6 GNPQTILLL----GGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVA----QMKAAGASSVEVIDFDALDTDSHPK   77 (253)
T ss_pred             CCCcEEEEE----cCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHH----HHHhcCCCceEEEEecCCChHHHHH
Confidence            456789999    999999999999999995 999999998754 222110    0111111245556665   444333


Q ss_pred             ----hhcCCCccEEEeCCCCC--------------------h----hhHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          147 ----VVGGVTFDVVLDNNGKN--------------------L----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       147 ----~~~~~~~d~Vi~~a~~~--------------------~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                          +.+..++|++||++|..                    +    ..++.+++++++.+..+||++||...+...   +
T Consensus        78 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~---~  154 (253)
T PRK07904         78 VIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR---R  154 (253)
T ss_pred             HHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---C
Confidence                33222589999988742                    1    113457778888888899999996532211   1


Q ss_pred             CCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....+..+|.....+       +..+++++++++||++..+....         .   ...         ...+..
T Consensus       155 ----~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~---------~---~~~---------~~~~~~  209 (253)
T PRK07904        155 ----SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH---------A---KEA---------PLTVDK  209 (253)
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc---------C---CCC---------CCCCCH
Confidence                011234456554322       33458999999999987642210         0   000         113688


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +|+|+.++.+++++..
T Consensus       210 ~~~A~~i~~~~~~~~~  225 (253)
T PRK07904        210 EDVAKLAVTAVAKGKE  225 (253)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            9999999999987643

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.34  E-value=4.2e-11  Score=107.73  Aligned_cols=199  Identities=15%  Similarity=0.167  Sum_probs=121.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||+|.||+.++++|+++|++|++++|.....  ...    .... ...++.++.+|   .+++.++++
T Consensus         7 ~~k~~lIt----Gas~gIG~aia~~l~~~G~~vv~~~~~~~~~--~~~----~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12481          7 NGKVAIIT----GCNTGLGQGMAIGLAKAGADIVGVGVAEAPE--TQA----QVEA-LGRKFHFITADLIQQKDIDSIVS   75 (251)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCchHHH--HHH----HHHH-cCCeEEEEEeCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999998864211  000    0001 01234444555   666666654


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCC-CcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSG-VKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~g-v~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|++||++|.                    |+.+...+.+    .+++.+ -.++|++||...+.....   
T Consensus        76 ~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  152 (251)
T PRK12481         76 QAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR---  152 (251)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---
Confidence            32     48999999983                    3444444444    444433 368999999765543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...|..+|.+.+.+.+       .+|+++..++||.+-.+...... .....+.+...-|.         ..+...
T Consensus       153 ----~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p  219 (251)
T PRK12481        153 ----VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA---------SRWGTP  219 (251)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC---------CCCcCH
Confidence                1234557777665544       24899999999998655321100 00111112111111         124678


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +|+|+++..++.+... ..|+++.+.+|
T Consensus       220 eeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        220 DDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHHHHHHhCccccCcCCceEEECCC
Confidence            9999999999976433 45577777665

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.33  E-value=4.2e-12  Score=115.09  Aligned_cols=202  Identities=16%  Similarity=0.177  Sum_probs=121.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|.||.+++++|+++|++|++++|+.+...+....    .... ..++.++.+|   ++++..+++
T Consensus         8 ~~k~ilIt----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~-~~~~~~~~~Dv~~~~~i~~~~~   78 (264)
T PRK07576          8 AGKNVVVV----GGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQ----LQQA-GPEGLGVSADVRDYAAVEAAFA   78 (264)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHh-CCceEEEECCCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999986543221100    0000 1123344444   566666554


Q ss_pred             CC-----CccEEEeCCC--------------------CChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~--------------------~~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      +.     ++|+|||+++                    .|+.++.++++++...   ...+||++||...+...       
T Consensus        79 ~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~-------  151 (264)
T PRK07576         79 QIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM-------  151 (264)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC-------
Confidence            42     4799999987                    2455666666655431   12589999996543211       


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchH--HHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEE--WFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      .....+..+|.+.+.+.+.       .+++++.++|+.+.+.........  .....+...  .+       ...+...+
T Consensus       152 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~  222 (264)
T PRK07576        152 PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--VP-------LKRNGTKQ  222 (264)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--CC-------CCCCCCHH
Confidence            1111233466666665553       378899999998865321110000  001111111  11       12356789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |++++++.++..+.. ..|..+.+.++.
T Consensus       223 dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        223 DIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            999999999986533 355777777764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.33  E-value=1.2e-11  Score=112.57  Aligned_cols=202  Identities=14%  Similarity=0.135  Sum_probs=121.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|.||++++++|+++|++|++++|+ +...+..       .++.  ..++..+.+|   .+++..+
T Consensus         5 ~~k~vlIt----Gas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~   72 (272)
T PRK08589          5 ENKVAVIT----GASTGIGQASAIALAQEGAYVLAVDIA-EAVSETV-------DKIKSNGGKAKAYHVDISDEQQVKDF   72 (272)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHH-------HHHHhcCCeEEEEEeecCCHHHHHHH
Confidence            46899999    999999999999999999999999998 4332211       1111  1124445555   5555555


Q ss_pred             hcCC-----CccEEEeCCCCC---------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGKN---------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~---------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||++|..                     +.+    ++.++..+++.+ .++|++||...+..... 
T Consensus        73 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-  150 (272)
T PRK08589         73 ASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLY-  150 (272)
T ss_pred             HHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCC-
Confidence            4422     379999999831                     122    234455565555 69999999765432211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc---hHHHHHHHHhCCCcccCCCCCccee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                            ...|..+|.+++.+.+.       .|+++..+.||.+..+......   ...+............+     ...
T Consensus       151 ------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  219 (272)
T PRK08589        151 ------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP-----LGR  219 (272)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC-----CCC
Confidence                  12234567666655543       3799999999998765322100   00000000000000000     112


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +...+|++++++.++.++.. .+|+.+.+.++.
T Consensus       220 ~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        220 LGKPEEVAKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence            46789999999999876543 456888887764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.6e-11  Score=109.58  Aligned_cols=202  Identities=14%  Similarity=0.160  Sum_probs=123.0

Q ss_pred             cceEEEEEecCCCccc-chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG-~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+| .||+.+++.|+++|++|++++|+.+..++....    ..+ .....+.++.+|   .++++.+
T Consensus        16 ~~k~vlIt----G~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~   87 (262)
T PRK07831         16 AGKVVLVT----AAAGTGIGSATARRALEEGARVVISDIHERRLGETADE----LAAELGLGRVEAVVCDVTSEAQVDAL   87 (262)
T ss_pred             CCCEEEEE----CCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHHhcCCceEEEEEccCCCHHHHHHH
Confidence            46889999    9998 699999999999999999999876543321100    000 001234555566   5555555


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCC-CcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSG-VKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~g-v~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||++|.                    |+.+...+++    .++..+ -.++|++||...+...   
T Consensus        88 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---  164 (262)
T PRK07831         88 IDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ---  164 (262)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---
Confidence            5432     47999999983                    2333333333    334443 4589998885432211   


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          .....+..+|.+.+.+.+.       +++++..++||.+..+.............+....++         ..+..
T Consensus       165 ----~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~  231 (262)
T PRK07831        165 ----HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAE  231 (262)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcC
Confidence                1112344567776665542       379999999999988753321112233333333221         12456


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .+|+|++++.++.+... ..|+++.+.++
T Consensus       232 p~~va~~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        232 PWEVANVIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHHHHHHHHcCchhcCcCCceEEeCCC
Confidence            78999999999887643 35677777654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.32  E-value=7e-11  Score=107.03  Aligned_cols=195  Identities=15%  Similarity=0.229  Sum_probs=119.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+....              .++..+.+|   ++++.++++
T Consensus         8 ~~k~vlIt----G~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~~   69 (266)
T PRK06171          8 QGKIIIVT----GGSSGIGLAIVKELLANGANVVNADIHGGDGQH--------------ENYQFVPTDVSSAEEVNHTVA   69 (266)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CceEEEEccCCCHHHHHHHHH
Confidence            46889999    999999999999999999999999987654321              123344444   566665554


Q ss_pred             CC-----CccEEEeCCCCC-----------------------------hhhHHHHHHHHH----hCCCcEEEEecccccc
Q 018900          150 GV-----TFDVVLDNNGKN-----------------------------LDAVRPVADWAK----SSGVKQFLFISSAGIY  191 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~~-----------------------------~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy  191 (349)
                      ..     ++|+|||++|..                             +.+...+++++.    +.+..+||++||...+
T Consensus        70 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (266)
T PRK06171         70 EIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL  149 (266)
T ss_pred             HHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence            32     479999999831                             233444444443    3445689999996544


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-ch-----------HHHHHHHHh
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CE-----------EWFFDRIVR  252 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~-----------~~~~~~~~~  252 (349)
                      ....       ....+..+|.+++.+.+.       .++++.+++||.+........ ..           ..+...+..
T Consensus       150 ~~~~-------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (266)
T PRK06171        150 EGSE-------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTK  222 (266)
T ss_pred             CCCC-------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcc
Confidence            3211       112234567776655443       389999999998742211110 00           011111111


Q ss_pred             CCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       253 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ....+       ...+...+|+|.++..++.+... ..|+++++.+|.
T Consensus       223 ~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        223 TSTIP-------LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             ccccc-------CCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence            00111       11246779999999999876543 456788887664

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=8.7e-11  Score=105.82  Aligned_cols=203  Identities=13%  Similarity=0.112  Sum_probs=121.6

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCccc-CCCCCCCc--c-ccee--cCCCeEEEcC---h
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNR--F-NEIV--SAGGKTVWGD---P  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~--~-~~l~--~~~~~~~~~D---~  141 (349)
                      ++++||||    ||+|  .||.+++++|+++|++|++++|++..... ........  . .++.  ...+.++.+|   .
T Consensus         4 ~~k~vlIt----Gas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   79 (256)
T PRK12748          4 MKKIALVT----GASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP   79 (256)
T ss_pred             CCcEEEEe----CCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            46789999    9996  69999999999999999999987321100 00000000  0 0111  1235566666   4


Q ss_pred             hhHHhhhcC-----CCccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCcEEEEeccccccC
Q 018900          142 AEVGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYK  192 (349)
Q Consensus       142 ~~l~~~~~~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~  192 (349)
                      +++..+++.     .++|+|||+++.                    |+.++..+++++..    .+.++||++||...++
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            554444432     248999999983                    34556666665533    2446899999976654


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      +..+       ...+..+|..++.+++.       .+++++.++||.+..+.....    .........+    .     
T Consensus       160 ~~~~-------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~----~~~~~~~~~~----~-----  219 (256)
T PRK12748        160 PMPD-------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE----LKHHLVPKFP----Q-----  219 (256)
T ss_pred             CCCC-------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh----HHHhhhccCC----C-----
Confidence            3211       12244567777776543       379999999998765532211    1111111111    0     


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+...+|+++.+..++..... ..|+++++.++.
T Consensus       220 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        220 GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence            1134579999999988876533 346888887663

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.31  E-value=4.6e-11  Score=108.07  Aligned_cols=198  Identities=19%  Similarity=0.181  Sum_probs=121.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++...       + ..++.++.+|   .+++..+++
T Consensus         5 ~~k~vlVt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~   72 (263)
T PRK06200          5 HGQVALIT----GGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQR-------F-GDHVLVVEGDVTSYADNQRAVD   72 (263)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h-CCcceEEEccCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987544322111       1 1234455555   555555544


Q ss_pred             CC-----CccEEEeCCCC-------------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCC
Q 018900          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-------------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ..     ++|++||++|.                         |+.+...+++++    ++.+ .++|++||...+....
T Consensus        73 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~  151 (263)
T PRK06200         73 QTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGG  151 (263)
T ss_pred             HHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCC
Confidence            32     48999999983                         112233334433    3333 5899999976554321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCc----------hHHHHHHHHhCCCcccC
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRKRPVPIP  259 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~  259 (349)
                      +       ...|..+|.+++.+.+..      ++++..+.||.+..+......          .....+.+....+    
T Consensus       152 ~-------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  220 (263)
T PRK06200        152 G-------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP----  220 (263)
T ss_pred             C-------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC----
Confidence            1       112445777766655432      588999999998665321100          0000111111111    


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCC-Cc-cCCCEEEeeCCC
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENP-EA-ASSNIFNLVSDR  299 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~-~~-~~~~~~~i~~~~  299 (349)
                           ...+...+|++++++.++.+. .. ..|+++.+.+|.
T Consensus       221 -----~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        221 -----LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             -----CCCCCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence                 123567899999999998765 33 356788887663

>TIGR02415 23BDH acetoin reductases

Probab=99.30  E-value=1.5e-11  Score=110.52  Aligned_cols=201  Identities=16%  Similarity=0.169  Sum_probs=118.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++|||    ||+|+||.+++++|+++|++|+++.|+.+...++.       .++.  ...+.++.+|   ++++.+++.
T Consensus         1 k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~i~~~~~   69 (254)
T TIGR02415         1 KVALVT----GGAQGIGKGIAERLAKDGFAVAVADLNEETAKETA-------KEINQAGGKAVAYKLDVSDKDQVFSAID   69 (254)
T ss_pred             CEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            479999    99999999999999999999999999754332111       1111  1234455555   555555543


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCC-cEEEEecccc-ccCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGV-KQFLFISSAG-IYKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~gv-~~~i~~Ss~~-vy~~~~~~~  198 (349)
                      ..     ++|+|||+++.                    |+.+..    .++..+++.+. .++|++||.. .++...   
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  146 (254)
T TIGR02415        70 QAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI---  146 (254)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC---
Confidence            22     47999999983                    222333    34444454442 6899999854 443321   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCccc------CCCCCcc
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI------PGSGMQF  265 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  265 (349)
                           ...+..+|..++.+.+.       .++++.+++||.+..+....     +...........+      +......
T Consensus       147 -----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (254)
T TIGR02415       147 -----LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE-----IDEETSEIAGKPIGEGFEEFSSEIAL  216 (254)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh-----hhhhhhhcccCchHHHHHHHHhhCCC
Confidence                 12234467776666543       27899999999885543211     1110000000000      0000001


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+.+.+|+++++..++.++.. .+|..+.+.++.
T Consensus       217 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       217 GRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             CCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence            2267889999999999988653 345666666553

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.30  E-value=5.6e-12  Score=128.43  Aligned_cols=210  Identities=16%  Similarity=0.200  Sum_probs=122.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...........   ......+..+.+|   .+++.+++.
T Consensus       413 ~gkvvLVT----GasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~---~~~~~~~~~v~~Dvtd~~~v~~a~~  485 (676)
T TIGR02632       413 ARRVAFVT----GGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEING---QFGAGRAVALKMDVTDEQAVKAAFA  485 (676)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---hcCCCcEEEEECCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999986543321100000   0001123344455   666666665


Q ss_pred             CC-----CccEEEeCCCCC--------------------hhh----HHHHHHHHHhCC-CcEEEEecccc-ccCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGKN--------------------LDA----VRPVADWAKSSG-VKQFLFISSAG-IYKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~~--------------------~~~----~~~ll~~a~~~g-v~~~i~~Ss~~-vy~~~~~~~  198 (349)
                      ..     ++|+|||+||..                    +.+    ++.++..+++.+ ..+||++||.. +++...   
T Consensus       486 ~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~---  562 (676)
T TIGR02632       486 DVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN---  562 (676)
T ss_pred             HHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC---
Confidence            32     479999999931                    112    234445555544 35899999964 333221   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCcee-eCCCCCCchHHHHHHHHh-CCCc----ccCCCCCcc
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMI-GSGNNKDCEEWFFDRIVR-KRPV----PIPGSGMQF  265 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~-g~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~  265 (349)
                           ...+..+|...+.+.+.       .|+++..++|+.++ +.+.....  +...+... +...    ..+......
T Consensus       563 -----~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~l  635 (676)
T TIGR02632       563 -----ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGE--WREERAAAYGIPADELEEHYAKRTLL  635 (676)
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccccc--chhhhhhcccCChHHHHHHHHhcCCc
Confidence                 12233466666655543       27899999999887 33211100  00000000 0000    001111122


Q ss_pred             eeeeeHHHHHHHHHHHhcCC-CccCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~-~~~~~~~~~i~~~~  299 (349)
                      ..+++.+|+|++++.++.+. ....|+++++.+|.
T Consensus       636 ~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       636 KRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence            34688999999999988754 33456899998875

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.30  E-value=2.4e-11  Score=109.85  Aligned_cols=204  Identities=13%  Similarity=0.132  Sum_probs=119.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .++|+||||    ||++.||++++++|+++|++|+++.|.. +........    ........+.++.+|   +++++++
T Consensus         6 l~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~   77 (260)
T PRK08416          6 MKGKTLVIS----GGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAED----LEQKYGIKAKAYPLNILEPETYKEL   77 (260)
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHHhcCCceEEEEcCCCCHHHHHHH
Confidence            356899999    9999999999999999999998887643 222111100    000011234455555   5556555


Q ss_pred             hcCC-----CccEEEeCCCCC--------------------------hh----hHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          148 VGGV-----TFDVVLDNNGKN--------------------------LD----AVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~--------------------------~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      +...     ++|++||+|+..                          +.    .++.++..+++.+..+||++||...+.
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (260)
T PRK08416         78 FKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV  157 (260)
T ss_pred             HHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc
Confidence            5432     479999999621                          11    123344445555557999999965321


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      ...       ....+..+|.+++.+.+.       .|+++..+.||.+-.+..... -.......+....+.        
T Consensus       158 ~~~-------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--------  222 (260)
T PRK08416        158 YIE-------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL--------  222 (260)
T ss_pred             CCC-------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC--------
Confidence            111       112345678887665543       379999999998754421100 001111111111111        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                       ..+...+|++.+++.++.+... ..|+.+.+.++.
T Consensus       223 -~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        223 -NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             -CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence             1256789999999999876533 356788777653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.29  E-value=2e-11  Score=109.13  Aligned_cols=141  Identities=18%  Similarity=0.152  Sum_probs=93.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||+|+||+.++++|+++|++|++++|+.+...  .        .....++.++.+|   .+++++++.+
T Consensus         1 ~~~vlIt----GasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~--------~~~~~~~~~~~~D~~~~~~~~~~~~~   66 (243)
T PRK07023          1 AVRAIVT----GHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A--------AAAGERLAEVELDLSDAAAAAAWLAG   66 (243)
T ss_pred             CceEEEe----cCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h--------hccCCeEEEEEeccCCHHHHHHHHHH
Confidence            4689999    99999999999999999999999999764211  0        0011234455555   5556553322


Q ss_pred             ---------CCccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCC
Q 018900          151 ---------VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       151 ---------~~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                               .++|.+||+++.                     |+.+    ++.+++.+++.+.++||++||...+....+
T Consensus        67 ~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  146 (243)
T PRK07023         67 DLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG  146 (243)
T ss_pred             HHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC
Confidence                     247999999883                     2233    445555666556679999999776543211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh------hCCcEEEEecCceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE------NFSNWASFRPQYMIG  235 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~------~~~~~~ilR~~~v~g  235 (349)
                             ...+..+|..++.+++.      .++++..++||.+-.
T Consensus       147 -------~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t  184 (243)
T PRK07023        147 -------WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT  184 (243)
T ss_pred             -------chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence                   11233467666666652      378999999998744

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.29  E-value=2.1e-10  Score=101.14  Aligned_cols=178  Identities=15%  Similarity=0.158  Sum_probs=114.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh--
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV--  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~--  148 (349)
                      |+++|||    ||+|.||++++++|+++|++|++++|+.+..+++.           ..+++++.+|   .+++.+++  
T Consensus         1 ~~~vlvt----G~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~v~~~~~~   65 (222)
T PRK06953          1 MKTVLIV----GASRGIGREFVRQYRADGWRVIATARDAAALAALQ-----------ALGAEALALDVADPASVAGLAWK   65 (222)
T ss_pred             CceEEEE----cCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------hccceEEEecCCCHHHHHHHHHH
Confidence            5789999    99999999999999999999999999865443221           1233445555   55555543  


Q ss_pred             -cCCCccEEEeCCCC----------------------ChhhHHHHHHHHHh---CCCcEEEEeccc-cccCCCCCCCCCC
Q 018900          149 -GGVTFDVVLDNNGK----------------------NLDAVRPVADWAKS---SGVKQFLFISSA-GIYKPADEPPHVE  201 (349)
Q Consensus       149 -~~~~~d~Vi~~a~~----------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~-~vy~~~~~~~~~e  201 (349)
                       ...++|+|||+++.                      |+.++.++++++..   ..-.++|++||. +.++.....    
T Consensus        66 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----  141 (222)
T PRK06953         66 LDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGT----  141 (222)
T ss_pred             hcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCC----
Confidence             33358999999873                      23456666666643   123478898884 455532211    


Q ss_pred             CCCCCCCCChHHHHHHHHhh-----CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISEN-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                       ....+..+|..++.+++..     ++++..++||++..+...                     +    ..++..+|.++
T Consensus       142 -~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~  195 (222)
T PRK06953        142 -TGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A----QAALDPAQSVA  195 (222)
T ss_pred             -CccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C----CCCCCHHHHHH
Confidence             0113556788877776643     677899999987654311                     0    11356788888


Q ss_pred             HHHHHhcCCCc-cCCCEEEee
Q 018900          277 MLTLAVENPEA-ASSNIFNLV  296 (349)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~i~  296 (349)
                      .+..++..... ..+..|...
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~  216 (222)
T PRK06953        196 GMRRVIAQATRRDNGRFFQYD  216 (222)
T ss_pred             HHHHHHHhcCcccCceEEeeC
Confidence            88888765543 233445444

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.28  E-value=4e-11  Score=107.42  Aligned_cols=188  Identities=13%  Similarity=0.099  Sum_probs=112.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~~  147 (349)
                      +.++||||    ||+|+||.+++++|+++|++|++++|+.+..+++...    +.......+.++.+|     .+++.++
T Consensus        11 ~~k~vlIt----G~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945         11 KDRIILVT----GAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDE----IEAAGGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH----HHhcCCCCceEEEecccCCCHHHHHHH
Confidence            57899999    9999999999999999999999999986543322100    001111123333333     3333333


Q ss_pred             hc----C-CCccEEEeCCCC---------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VG----G-VTFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~----~-~~~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++    . .++|+|||+++.                     |+.++.++++    .+++.+..+||++||...+....  
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~--  160 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA--  160 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC--
Confidence            22    1 147999999973                     3344444444    44566778999999965332211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ....+..+|...+.+++..       ++++.+++|+.+-.+....         .....         ....+..
T Consensus       161 -----~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---------~~~~~---------~~~~~~~  217 (247)
T PRK08945        161 -----NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---------AFPGE---------DPQKLKT  217 (247)
T ss_pred             -----CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---------hcCcc---------cccCCCC
Confidence                 1112345677766665542       6888999998875542111         00000         0112567


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEE
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIF  293 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~  293 (349)
                      .+|++++++.++.++.. ..|+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~g~~~  241 (247)
T PRK08945        218 PEDIMPLYLYLMGDDSRRKNGQSF  241 (247)
T ss_pred             HHHHHHHHHHHhCccccccCCeEE
Confidence            89999999998876543 233444

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.28  E-value=1.9e-11  Score=114.08  Aligned_cols=111  Identities=18%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.+...+.....    . .....+.++.+|   .+++.+++
T Consensus         4 ~~~k~vlVT----Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l----~-~~~~~~~~~~~Dl~~~~~v~~~~   74 (322)
T PRK07453          4 DAKGTVIIT----GASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL----G-IPPDSYTIIHIDLGDLDSVRRFV   74 (322)
T ss_pred             CCCCEEEEE----cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----h-ccCCceEEEEecCCCHHHHHHHH
Confidence            357889999    99999999999999999999999999865433221110    0 011234455555   55555555


Q ss_pred             cC-----CCccEEEeCCCC---------------------ChhhHHHHHH----HHHhCC--CcEEEEecccccc
Q 018900          149 GG-----VTFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSG--VKQFLFISSAGIY  191 (349)
Q Consensus       149 ~~-----~~~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~g--v~~~i~~Ss~~vy  191 (349)
                      +.     .++|+|||+||.                     |+.++.++++    .+++.+  ..|+|++||...+
T Consensus        75 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~  149 (322)
T PRK07453         75 DDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTAN  149 (322)
T ss_pred             HHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccC
Confidence            43     248999999983                     2233334444    444443  3599999997654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.28  E-value=5.1e-11  Score=118.40  Aligned_cols=199  Identities=16%  Similarity=0.166  Sum_probs=124.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCC---CeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG---GKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~D~~~l~~~~~  149 (349)
                      .++++|||    ||+|.||.+++++|+++|++|++++|+.+..+++...       + ...   +.++..|++++.++++
T Consensus       268 ~~k~~lIt----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~  335 (520)
T PRK06484        268 SPRVVAIT----GGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA-------L-GDEHLSVQADITDEAAVESAFA  335 (520)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h-CCceeEEEccCCCHHHHHHHHH
Confidence            56899999    9999999999999999999999999986544322211       0 112   2333445666666654


Q ss_pred             CC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      ..     ++|++||+||.                     |+.++.++++++...  +..+||++||...+....+     
T Consensus       336 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  410 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP-----  410 (520)
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC-----
Confidence            32     38999999983                     344555555554332  2358999999764432111     


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                        ...|..+|.+++.+.+.       .|+++..++||.+..+......  .......+.+..+.         ..+...+
T Consensus       411 --~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  479 (520)
T PRK06484        411 --RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPE  479 (520)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHH
Confidence              12244567776654433       3799999999999776422100  00111222222211         1246789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++..... .+|+++.+.++.
T Consensus       480 dia~~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        480 EVAEAIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCCc
Confidence            999999999876533 456888888764

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.28  E-value=5.9e-11  Score=106.47  Aligned_cols=195  Identities=16%  Similarity=0.148  Sum_probs=114.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ||+||||    ||+|+||++++++|+++|++|++++|+. +...++..        ....++.++.+|   .++++++++
T Consensus         1 ~k~vlIt----GasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~   68 (251)
T PRK06924          1 MRYVIIT----GTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE--------QYNSNLTFHSLDLQDVHELETNFN   68 (251)
T ss_pred             CcEEEEe----cCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh--------ccCCceEEEEecCCCHHHHHHHHH
Confidence            4689999    9999999999999999999999999976 22221111        112244555555   566655554


Q ss_pred             CC---------CccEEEeCCCC---------------------Chhh----HHHHHHHHHhC-CCcEEEEeccccccCCC
Q 018900          150 GV---------TFDVVLDNNGK---------------------NLDA----VRPVADWAKSS-GVKQFLFISSAGIYKPA  194 (349)
Q Consensus       150 ~~---------~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~  194 (349)
                      ..         ..+.+||++|.                     |+.+    +++++..+++. +.++||++||...+...
T Consensus        69 ~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  148 (251)
T PRK06924         69 EILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY  148 (251)
T ss_pred             HHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC
Confidence            32         11278888773                     3333    44555556554 34689999996543221


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCC
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~  260 (349)
                      .       ....+..+|.+.+.+.+    +     .++++..++||.+-.+....     .......+......     .
T Consensus       149 ~-------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~  216 (251)
T PRK06924        149 F-------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK-----E  216 (251)
T ss_pred             C-------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh-----h
Confidence            1       11223456766665543    2     36889999999875442110     00000011111100     0


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEee
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~  296 (349)
                      .    ..+...+|+|+.++.++.+....+|+.+.+.
T Consensus       217 ~----~~~~~~~dva~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        217 E----GKLLSPEYVAKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             c----CCcCCHHHHHHHHHHHHhcccCCCCCEeehh
Confidence            0    1257889999999999987544455666543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.28  E-value=3.4e-11  Score=104.62  Aligned_cols=188  Identities=15%  Similarity=0.137  Sum_probs=119.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhh----h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV----V  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~----~  148 (349)
                      ..|.||||    ||++.||..+++.|.+.|++|++..|..+.++++......  ..  ..-+.++..|.++++.+    .
T Consensus         5 ~~kv~lIT----GASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~--~~~~~~DVtD~~~~~~~i~~~~   76 (246)
T COG4221           5 KGKVALIT----GASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GA--ALALALDVTDRAAVEAAIEALP   76 (246)
T ss_pred             CCcEEEEe----cCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--Cc--eEEEeeccCCHHHHHHHHHHHH
Confidence            35789999    9999999999999999999999999998877665433211  00  01223444566554333    3


Q ss_pred             cCCC-ccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCCCC
Q 018900          149 GGVT-FDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEG  202 (349)
Q Consensus       149 ~~~~-~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~e~  202 (349)
                      ...+ +|++||+||.                    |+.|    ++.++-.+.+.+-.++|.+||++ .|..+...     
T Consensus        77 ~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~-----  151 (246)
T COG4221          77 EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGA-----  151 (246)
T ss_pred             HhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCc-----
Confidence            3443 8999999993                    3444    55666667777777999999965 22222221     


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCC----CCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         -|..+|+.+..+...       .+++++.+-||.+-.....    .+- ....+....            ....+..
T Consensus       152 ---vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~-~~~~~~~y~------------~~~~l~p  215 (246)
T COG4221         152 ---VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGD-DERADKVYK------------GGTALTP  215 (246)
T ss_pred             ---cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCch-hhhHHHHhc------------cCCCCCH
Confidence               133467765554322       3789999999987442111    100 000111111            1235789


Q ss_pred             HHHHHHHHHHhcCCCccC
Q 018900          272 RDLSSMLTLAVENPEAAS  289 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~  289 (349)
                      +|+|+.+..+++.|...+
T Consensus       216 ~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         216 EDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             HHHHHHHHHHHhCCCccc
Confidence            999999999999997643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.27  E-value=2.8e-11  Score=107.84  Aligned_cols=183  Identities=18%  Similarity=0.159  Sum_probs=121.3

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ..+++++|||    |||+.||..++++|.++||+|+.+.|+.+.+.++.....    +-..-.++++..|   ++++..+
T Consensus         3 ~~~~~~~lIT----GASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~----~~~~v~v~vi~~DLs~~~~~~~l   74 (265)
T COG0300           3 PMKGKTALIT----GASSGIGAELAKQLARRGYNLILVARREDKLEALAKELE----DKTGVEVEVIPADLSDPEALERL   74 (265)
T ss_pred             CCCCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHH----HhhCceEEEEECcCCChhHHHHH
Confidence            3467899999    999999999999999999999999999877665432211    1111235566677   4444444


Q ss_pred             h---cC--CCccEEEeCCCC--------------------C----hhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 V---GG--VTFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~---~~--~~~d~Vi~~a~~--------------------~----~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      .   .+  ..+|++|++||.                    |    ...++.++..+.+.+..++|.++|..-|-+.   |
T Consensus        75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~---p  151 (265)
T COG0300          75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT---P  151 (265)
T ss_pred             HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---c
Confidence            3   23  358999999993                    2    2346677777888888899999997644322   1


Q ss_pred             CCCCCCCCCCCChHHHHHH------------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          199 HVEGDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~------------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      .         .+-|.+.|.            ++.+|+.++.+.||.+.-...         +  ..+.....   .....
T Consensus       152 ~---------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~---------~--~~~~~~~~---~~~~~  208 (265)
T COG0300         152 Y---------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFF---------D--AKGSDVYL---LSPGE  208 (265)
T ss_pred             c---------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccc---------c--cccccccc---ccchh
Confidence            1         133444332            233489999999998765432         2  11111110   01124


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      -++..+|+|++.+.+++..+.
T Consensus       209 ~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         209 LVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             hccCHHHHHHHHHHHHhcCCc
Confidence            578999999999999998654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.27  E-value=2.8e-11  Score=111.58  Aligned_cols=189  Identities=17%  Similarity=0.150  Sum_probs=114.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCe---EEEcChhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGK---TVWGDPAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~---~~~~D~~~l~~~~  148 (349)
                      .+++||||    ||+|.||.+++++|.++|++|++++|+.+...++..       ++. ...+.   ++..|.+++.+++
T Consensus         8 ~gk~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~-------~l~~~~~~~~~~~Dv~d~~~v~~~~   76 (296)
T PRK05872          8 AGKVVVVT----GAARGIGAELARRLHARGAKLALVDLEEAELAALAA-------ELGGDDRVLTVVADVTDLAAMQAAA   76 (296)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HhcCCCcEEEEEecCCCHHHHHHHH
Confidence            46899999    999999999999999999999999998754432211       110 01122   3334466665555


Q ss_pred             cC-----CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCC
Q 018900          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       149 ~~-----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +.     -++|+|||++|.                    |+.+..++++++...   +..+||++||...+.....    
T Consensus        77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  152 (296)
T PRK05872         77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG----  152 (296)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC----
Confidence            43     148999999993                    344445555544221   2358999999765543211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchH-HHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         ...|..+|..++.+.+.       .++.+.++.||++..+........ .....+....+.+       ...++..+
T Consensus       153 ---~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~  222 (296)
T PRK05872        153 ---MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSVE  222 (296)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCHH
Confidence               11233456665555432       489999999998866532211000 1112222111111       12356899


Q ss_pred             HHHHHHHHHhcCCC
Q 018900          273 DLSSMLTLAVENPE  286 (349)
Q Consensus       273 Dva~~~~~~~~~~~  286 (349)
                      |++++++.++.+..
T Consensus       223 ~va~~i~~~~~~~~  236 (296)
T PRK05872        223 KCAAAFVDGIERRA  236 (296)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999998754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.26  E-value=6.4e-11  Score=105.28  Aligned_cols=194  Identities=17%  Similarity=0.219  Sum_probs=115.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|++|+++++.|+++|++|++++|+++....+.       .++. ..++.++.+|   .+++.+++
T Consensus         4 ~~~~vlIt----Ga~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~   72 (238)
T PRK05786          4 KGKKVAII----GVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMK-------KTLSKYGNIHYVVGDVSSTESARNVI   72 (238)
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEECCCCCHHHHHHHH
Confidence            45799999    99999999999999999999999999875432211       0010 0134556666   45555444


Q ss_pred             cCC-----CccEEEeCCCCC------------------hhhHHHHHHHHHhC--CCcEEEEeccccc-cCCCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGKN------------------LDAVRPVADWAKSS--GVKQFLFISSAGI-YKPADEPPHVEG  202 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~~------------------~~~~~~ll~~a~~~--gv~~~i~~Ss~~v-y~~~~~~~~~e~  202 (349)
                      +..     ++|.++|+++..                  +.+...+++.+...  ...+||++||... ++...       
T Consensus        73 ~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-------  145 (238)
T PRK05786         73 EKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP-------  145 (238)
T ss_pred             HHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC-------
Confidence            322     269999998731                  22222233322221  1257999998643 32211       


Q ss_pred             CCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          203 DVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ....+..+|...+.+++    +   .+++++++||++++++.....    .....   .+   .+     ..++..+|++
T Consensus       146 ~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~~~~~---~~---~~-----~~~~~~~~va  210 (238)
T PRK05786        146 DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER----NWKKL---RK---LG-----DDMAPPEDFA  210 (238)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----hhhhh---cc---cc-----CCCCCHHHHH
Confidence            11123345665544332    2   389999999999998743210    00100   00   01     1246789999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++++.++..+.. ..|+.+.+.++.
T Consensus       211 ~~~~~~~~~~~~~~~g~~~~~~~~~  235 (238)
T PRK05786        211 KVIIWLLTDEADWVDGVVIPVDGGA  235 (238)
T ss_pred             HHHHHHhcccccCccCCEEEECCcc
Confidence            999999976543 345777776543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.25  E-value=2.3e-10  Score=102.93  Aligned_cols=200  Identities=15%  Similarity=0.157  Sum_probs=121.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .+++.+|||    ||+|.||++++++|.++|++|++++|.....  ..    .....+ ...+..+.+|   .+++.+++
T Consensus         8 l~~k~~lIt----G~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~--~~----~~~~~~-~~~~~~~~~Dl~~~~~~~~~~   76 (253)
T PRK08993          8 LEGKVAVVT----GCDTGLGQGMALGLAEAGCDIVGINIVEPTE--TI----EQVTAL-GRRFLSLTADLRKIDGIPALL   76 (253)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEecCcchHH--HH----HHHHhc-CCeEEEEECCCCCHHHHHHHH
Confidence            346899999    9999999999999999999999887753210  00    000011 1123344444   56666665


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|++||++|.                    |+.+..++++++    ++.+ -.++|++||...+.....  
T Consensus        77 ~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  154 (253)
T PRK08993         77 ERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--  154 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC--
Confidence            532     48999999983                    445555555544    3333 258999999766553221  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ...|..+|.+++.+.+.       .|+++..++||.+-.+...... .......+...  ++  .     ..+..
T Consensus       155 -----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~--~p--~-----~r~~~  220 (253)
T PRK08993        155 -----VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR--IP--A-----GRWGL  220 (253)
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc--CC--C-----CCCcC
Confidence                 12344577776665542       3889999999998765322100 00011111111  11  0     12567


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .+|+++.++.++.+... ..|+.+.+.++
T Consensus       221 p~eva~~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        221 PSDLMGPVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            89999999999987644 34577776654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.24  E-value=1.4e-10  Score=104.76  Aligned_cols=201  Identities=19%  Similarity=0.178  Sum_probs=119.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++++||||    ||+|.||.+++++|+++|+.|+++.|+.+. .....       .++.  ...+.++.+|   .+++.
T Consensus         5 ~~~k~~lIt----Ga~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~i~   73 (261)
T PRK08936          5 LEGKVVVIT----GGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVA-------EEIKKAGGEAIAVKGDVTVESDVV   73 (261)
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHHcCCeEEEEEecCCCHHHHH
Confidence            357899999    999999999999999999999988885422 11110       0111  1123344444   55555


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCC-CcEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSG-VKQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|++||+++.                    |+.    .++.+++.+++.+ -.++|++||...+....
T Consensus        74 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~  153 (261)
T PRK08936         74 NLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP  153 (261)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC
Confidence            544321     47999999983                    222    2344556666654 36899999964332211


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCccee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                             ....+..+|.+.+.+.+    +   .++++..++||.+..+.....+ -......+....+.         ..
T Consensus       154 -------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~  217 (261)
T PRK08936        154 -------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM---------GY  217 (261)
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC---------CC
Confidence                   11123446655444332    2   3899999999999877533211 11111222222111         12


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +...+|+++++..++..... .+|..+.+.++.
T Consensus       218 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        218 IGKPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence            56789999999999886543 455677776654

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.24  E-value=4.3e-11  Score=111.97  Aligned_cols=184  Identities=18%  Similarity=0.175  Sum_probs=114.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEc---ChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWG---DPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~---D~~~l~~~  147 (349)
                      .+++||||    ||+|.||++++++|.++|++|++++|+.+..+++..       ++..  ..+.++.+   |.+++.++
T Consensus         6 ~~k~vlIT----GAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~-------~~~~~g~~~~~~~~Dv~d~~~v~~~   74 (330)
T PRK06139          6 HGAVVVIT----GASSGIGQATAEAFARRGARLVLAARDEEALQAVAE-------ECRALGAEVLVVPTDVTDADQVKAL   74 (330)
T ss_pred             CCCEEEEc----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            45789999    999999999999999999999999998755432211       1111  12333444   46666665


Q ss_pred             hcC-----CCccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~-----~~~d~Vi~~a~~--------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++.     -++|++||++|.                    |+.++.+    ++..+++.+..+||++||...+....   
T Consensus        75 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p---  151 (330)
T PRK06139         75 ATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP---  151 (330)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC---
Confidence            532     248999999983                    3334433    44445555667899999976543221   


Q ss_pred             CCCCCCCCCCCChHHHHHHH----Hh----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYI----SE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~----~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                      .    ...|..+|.++..+.    .|    .+++++.+.||.+..+.....      ... .+...      .....+++
T Consensus       152 ~----~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~------~~~-~~~~~------~~~~~~~~  214 (330)
T PRK06139        152 Y----AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG------ANY-TGRRL------TPPPPVYD  214 (330)
T ss_pred             C----chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc------ccc-ccccc------cCCCCCCC
Confidence            1    112334565533222    22    278999999999987753221      000 01110      01123578


Q ss_pred             HHHHHHHHHHHhcCCCc
Q 018900          271 VRDLSSMLTLAVENPEA  287 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~  287 (349)
                      .+|+|++++.+++++..
T Consensus       215 pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        215 PRRVAKAVVRLADRPRA  231 (330)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999987653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.23  E-value=1.5e-10  Score=104.53  Aligned_cols=198  Identities=18%  Similarity=0.211  Sum_probs=117.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |+||||    ||+|.||+.++++|+++|++|++++|+.+...+...       ++.. .++..+.+|   .++++++++.
T Consensus         1 m~vlIt----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~l~~~~~~~~~~~Dv~d~~~~~~~~~~   69 (259)
T PRK08340          1 MNVLVT----ASSRGIGFNVARELLKKGARVVISSRNEENLEKALK-------ELKEYGEVYAVKADLSDKDDLKNLVKE   69 (259)
T ss_pred             CeEEEE----cCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------HHHhcCCceEEEcCCCCHHHHHHHHHH
Confidence            589999    999999999999999999999999998654332111       1100 134445555   5666665542


Q ss_pred             ----C-CccEEEeCCCCC----------------------hhh----HHHHHHHHH-hCCCcEEEEeccccccCCCCCCC
Q 018900          151 ----V-TFDVVLDNNGKN----------------------LDA----VRPVADWAK-SSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       151 ----~-~~d~Vi~~a~~~----------------------~~~----~~~ll~~a~-~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                          . ++|+|||++|..                      +.+    +..++..+. +.+..+||++||...+.....  
T Consensus        70 ~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~--  147 (259)
T PRK08340         70 AWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP--  147 (259)
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC--
Confidence                1 489999999841                      111    222333333 334568999999765432111  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc----------hHH-HHHHHHhCCCcccCC
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----------EEW-FFDRIVRKRPVPIPG  260 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~----------~~~-~~~~~~~~~~~~~~~  260 (349)
                           ...+..+|.+++.+.+.       .|+++..+.||.+-.+.....+          ... +.+.+....+     
T Consensus       148 -----~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  217 (259)
T PRK08340        148 -----LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP-----  217 (259)
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC-----
Confidence                 11223456665554432       3788999999987655321100          000 0011111111     


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                          ...+...+|+|++++.++..+.. .+|+++.+.+|.
T Consensus       218 ----~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        218 ----LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             ----ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence                12256789999999999987543 456788777764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.23  E-value=9.6e-11  Score=105.97  Aligned_cols=180  Identities=17%  Similarity=0.175  Sum_probs=109.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|++|++++++|+++|++|++++|+.+..+.+..       ++ ....+.++.+|   .+++.+++
T Consensus         4 ~~~~vlIt----G~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~   72 (263)
T PRK09072          4 KDKRVLLT----GASGGIGQALAEALAAAGARLLLVGRNAEKLEALAA-------RLPYPGRHRWVVADLTSEAGREAVL   72 (263)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHhcCCceEEEEccCCCHHHHHHHH
Confidence            35789999    999999999999999999999999998654432211       11 01234455555   55555544


Q ss_pred             cC----CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEecccc-ccCCCCCCCC
Q 018900          149 GG----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       149 ~~----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                      +.    .++|+|||++|.                    |+.++.++++++    ++.+..++|++||.. .++...    
T Consensus        73 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  148 (263)
T PRK09072         73 ARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG----  148 (263)
T ss_pred             HHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC----
Confidence            32    237999999983                    334555555554    344456899998853 323211    


Q ss_pred             CCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...+..+|...+.+.+    +   .++.++.+.||.+..+....         ...  ..  ..  .....+...+
T Consensus       149 ----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~---------~~~--~~--~~--~~~~~~~~~~  209 (263)
T PRK09072        149 ----YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE---------AVQ--AL--NR--ALGNAMDDPE  209 (263)
T ss_pred             ----ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh---------hcc--cc--cc--cccCCCCCHH
Confidence                1112335555433332    2   37889999998875543111         000  00  00  0011356889


Q ss_pred             HHHHHHHHHhcCCC
Q 018900          273 DLSSMLTLAVENPE  286 (349)
Q Consensus       273 Dva~~~~~~~~~~~  286 (349)
                      |+|+.++.++++..
T Consensus       210 ~va~~i~~~~~~~~  223 (263)
T PRK09072        210 DVAAAVLQAIEKER  223 (263)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999999764

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.1e-10  Score=105.23  Aligned_cols=203  Identities=13%  Similarity=0.164  Sum_probs=120.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|.+|++++++|+++|++|++++|+.+...+....    +......++.++.+|   ++++.++++
T Consensus         6 ~~k~vlIt----G~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          6 AGKRVLIT----GASKGIGAAAAEAFAAEGCHLHLVARDADALEALAAD----LRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999986544321100    000011234444444   677777766


Q ss_pred             CC-CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      .. ++|.+||+++.                    |+.+..    .++..+++.+-.++|++||..-...     .  ...
T Consensus        78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-----~--~~~  150 (259)
T PRK06125         78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP-----D--ADY  150 (259)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC-----C--CCc
Confidence            54 38999999983                    233333    3444445555568999988543211     0  011


Q ss_pred             CCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc---------hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          205 VKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      ..+..+|.+.+.+.+.       .++++..++||.+..+.....+         .......+....+         ...+
T Consensus       151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  221 (259)
T PRK06125        151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP---------LGRP  221 (259)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCC---------cCCC
Confidence            1122356565444432       3799999999988665311000         0000001111000         1125


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|++++.++.+... .+|..+.+.+|.
T Consensus       222 ~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        222 ATPEEVADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             cCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence            6889999999999876543 466888888774

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.22  E-value=2.6e-10  Score=101.60  Aligned_cols=188  Identities=14%  Similarity=0.068  Sum_probs=112.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~~  147 (349)
                      ++++|+||    ||+|++|++++++|+++|++|++++|+.+..+.+...    +.......+..+..|     .+++.++
T Consensus         5 ~~k~vlIt----G~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK08703          5 SDKTILVT----GASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA----IVEAGHPEPFAIRFDLMSAEEKEFEQF   76 (239)
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH----HHHcCCCCcceEEeeecccchHHHHHH
Confidence            45799999    9999999999999999999999999987543321100    000000112223333     2233332


Q ss_pred             h----cC--CCccEEEeCCCC---------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCC
Q 018900          148 V----GG--VTFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~----~~--~~~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      +    ..  ..+|+|||+++.                     |+.+..++++    .+++.+..++|++||.....+.  
T Consensus        77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~--  154 (239)
T PRK08703         77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK--  154 (239)
T ss_pred             HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC--
Confidence            2    11  147999999983                     2334444444    4444556799999985322110  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh----h----CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE----N----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~----~----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                           .....+..+|.+++.+++.    .    ++++.+++||.++++.....         ..+         .....+
T Consensus       155 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---------~~~---------~~~~~~  211 (239)
T PRK08703        155 -----AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---------HPG---------EAKSER  211 (239)
T ss_pred             -----CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---------CCC---------CCcccc
Confidence                 1112345678887666543    2    58899999999988753211         011         111234


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEE
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIF  293 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~  293 (349)
                      ...+|++..+..++..... ..|++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        212 KSYGDVLPAFVWWASAESKGRSGEIV  237 (239)
T ss_pred             CCHHHHHHHHHHHhCccccCcCCeEe
Confidence            6889999999999985332 334544

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.22  E-value=3e-10  Score=103.47  Aligned_cols=190  Identities=14%  Similarity=0.121  Sum_probs=114.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+...++.........++.  ...+.++.+|   .+++.++
T Consensus         5 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          5 SGKTLFIT----GASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            35789999    9999999999999999999999999986543221100000000111  1234455565   5666665


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||++|.                    |+.++.++++++.    +.+-.++|++|+.......   .
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~  157 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---W  157 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---c
Confidence            5532     58999999983                    4556666666654    3334589999875321110   0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                      .  .....+..+|++++.+++..       ++++..+.|+.++...        +......+..        ....+...
T Consensus       158 ~--~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~--------~~~~~~~~~~--------~~~~~~~p  219 (273)
T PRK08278        158 F--APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA--------AVRNLLGGDE--------AMRRSRTP  219 (273)
T ss_pred             c--CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH--------HHHhcccccc--------cccccCCH
Confidence            0  11223456788887766542       7889999988432211        1111111111        11235688


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +|+|++++.++.....
T Consensus       220 ~~va~~~~~l~~~~~~  235 (273)
T PRK08278        220 EIMADAAYEILSRPAR  235 (273)
T ss_pred             HHHHHHHHHHhcCccc
Confidence            9999999999887543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.22  E-value=3e-10  Score=101.04  Aligned_cols=192  Identities=14%  Similarity=0.194  Sum_probs=116.7

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCccccee--cCCCeEEEcC---hhhHHhhhcC
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||||    ||+|+||.+++++|.++|++|+++.|..+. .+.+.       .++.  ..++.++.+|   .+++..+++.
T Consensus         1 vlIt----Gas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   69 (239)
T TIGR01831         1 VLVT----GASRGIGRAIANRLAADGFEICVHYHSGRSDAESVV-------SAIQAQGGNARLLQFDVADRVACRTLLEA   69 (239)
T ss_pred             CEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHHcCCeEEEEEccCCCHHHHHHHHHH
Confidence            6899    999999999999999999999999875421 11110       1111  1235555665   5555544432


Q ss_pred             ----C-CccEEEeCCCC--------------------ChhhHHHHHHHH-----HhCCCcEEEEecccc-ccCCCCCCCC
Q 018900          151 ----V-TFDVVLDNNGK--------------------NLDAVRPVADWA-----KSSGVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       151 ----~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a-----~~~gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                          . ++|.+||+++.                    |+.++.++++++     ++.+..+||++||.. .++....   
T Consensus        70 ~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---  146 (239)
T TIGR01831        70 DIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ---  146 (239)
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC---
Confidence                2 37999999882                    345566666654     234456899999954 4443221   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                           ..+..+|...+.+.+       +.+++++.++||.+..+.... ... ........-++         ..+...+
T Consensus       147 -----~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~~---------~~~~~~~  210 (239)
T TIGR01831       147 -----VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE-VEH-DLDEALKTVPM---------NRMGQPA  210 (239)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh-hhH-HHHHHHhcCCC---------CCCCCHH
Confidence                 123446766544332       238999999999987765432 111 12222222111         1234679


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      |++++++.++..+.. ..|.+..+.++
T Consensus       211 ~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       211 EVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEecCC
Confidence            999999999987543 34566666554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.2e-10  Score=105.97  Aligned_cols=186  Identities=15%  Similarity=0.058  Sum_probs=107.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~~~  151 (349)
                      |+++||    ||+|.||.+++++|+++|++|++++|+.+..++....    ........+..+.+   |++++.+++...
T Consensus         1 k~vlIt----Gas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (272)
T PRK07832          1 KRCFVT----GAASGIGRATALRLAAQGAELFLTDRDADGLAQTVAD----ARALGGTVPEHRALDISDYDAVAAFAADI   72 (272)
T ss_pred             CEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhcCCCcceEEEeeCCCHHHHHHHHHHH
Confidence            479999    9999999999999999999999999976433221100    00000111222334   455555444331


Q ss_pred             -----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhC-CCcEEEEeccccccCCCCCCCCCC
Q 018900          152 -----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSS-GVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       152 -----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~-gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                           ++|+|||++|.                    |+.+...+++++    ++. +..+||++||...+...   +   
T Consensus        73 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---~---  146 (272)
T PRK07832         73 HAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---P---  146 (272)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---C---
Confidence                 37999999983                    334455555554    232 24689999996532211   1   


Q ss_pred             CCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCc------hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          202 GDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDC------EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                       ....+..+|...+.+.       ...++++++++||.+.++......      ..........          ......
T Consensus       147 -~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  215 (272)
T PRK07832        147 -WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHA  215 (272)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCC
Confidence             1112334565443333       234899999999999876432100      0000011100          001124


Q ss_pred             eeHHHHHHHHHHHhcCC
Q 018900          269 AHVRDLSSMLTLAVENP  285 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~  285 (349)
                      +..+|+|+.++.+++..
T Consensus       216 ~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        216 VTPEKAAEKILAGVEKN  232 (272)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            78999999999999654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=4.8e-10  Score=103.91  Aligned_cols=211  Identities=15%  Similarity=0.113  Sum_probs=124.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .+++++|||    ||+|+||++++++|+++|++|++.+|.... .++..       .++.  ...+.++.+|   .+++.
T Consensus        10 l~~k~~lVT----Gas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~-------~~i~~~g~~~~~~~~Dv~d~~~~~   78 (306)
T PRK07792         10 LSGKVAVVT----GAAAGLGRAEALGLARLGATVVVNDVASALDASDVL-------DEIRAAGAKAVAVAGDISQRATAD   78 (306)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHH-------HHHHhcCCeEEEEeCCCCCHHHHH
Confidence            357899999    999999999999999999999999875421 11110       1111  1234455555   45555


Q ss_pred             hhhcC----CCccEEEeCCCC--------------------ChhhHHHHHHHHH----hC----C---CcEEEEeccccc
Q 018900          146 NVVGG----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SS----G---VKQFLFISSAGI  190 (349)
Q Consensus       146 ~~~~~----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~----g---v~~~i~~Ss~~v  190 (349)
                      ++++.    -++|+|||++|.                    |+.++.++++++.    +.    +   ..++|++||...
T Consensus        79 ~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         79 ELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            55432    148999999983                    3345556665542    11    1   248999998653


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      +....       ....|..+|.+++.+.+.       +|+++..+.|+.  ...    +    ...+....+.. ..   
T Consensus       159 ~~~~~-------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~----~----~~~~~~~~~~~-~~---  217 (306)
T PRK07792        159 LVGPV-------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTA----M----TADVFGDAPDV-EA---  217 (306)
T ss_pred             ccCCC-------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCc----h----hhhhccccchh-hh---
Confidence            32211       112344567776655432       478888888863  111    1    11111110000 00   


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeC------------------CCccCHHHHHHHHHHHh
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS------------------DRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~------------------~~~~t~~el~~~~~~~~  314 (349)
                      ....+++.+|++.++..++..... .+|++|.+.+                  +..++..|+.+.+.+++
T Consensus       218 ~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        218 GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence            112346889999999888876432 3456665543                  24578888888888873

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.21  E-value=1.8e-10  Score=104.20  Aligned_cols=199  Identities=14%  Similarity=0.200  Sum_probs=117.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+..+++...        ....+..+.+|   .+++.++++
T Consensus         4 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~~   71 (262)
T TIGR03325         4 KGEVVLVT----GGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--------HGDAVVGVEGDVRSLDDHKEAVA   71 (262)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--------cCCceEEEEeccCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544332211        01123444444   455555444


Q ss_pred             CC-----CccEEEeCCCC-------------------------ChhhHHHHHHHHH----hCCCcEEEEeccccccCCCC
Q 018900          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-------------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ..     ++|++||++|.                         |+.+...+++++.    +.+ .++|++||...+....
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~  150 (262)
T TIGR03325        72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNG  150 (262)
T ss_pred             HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCC
Confidence            32     47999999973                         1223444555443    223 4788888754332111


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCCch---H----HH-HHHHHhCCCcccCCC
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKDCE---E----WF-FDRIVRKRPVPIPGS  261 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~~~---~----~~-~~~~~~~~~~~~~~~  261 (349)
                             ....+..+|.+++.+.+..      .+++..+.||.+..+.......   .    .+ .....+. .++    
T Consensus       151 -------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p----  218 (262)
T TIGR03325       151 -------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP----  218 (262)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC----
Confidence                   1123445777776655432      3788899999987653221000   0    00 0111111 011    


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCC--ccCCCEEEeeCCC
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLVSDR  299 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~~~i~~~~  299 (349)
                         ...+...+|+|++++.++.+..  ...|+++.+.++.
T Consensus       219 ---~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       219 ---IGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             ---CCCCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence               1124578999999999887643  2356788887663

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.9e-10  Score=101.61  Aligned_cols=145  Identities=21%  Similarity=0.286  Sum_probs=92.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |++|+||    ||+|++|++++++|+++|++|++++|+.+....+..        +  .++.+..+|   +++++++++.
T Consensus         1 ~k~vlIt----G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--------~--~~~~~~~~D~~d~~~~~~~~~~   66 (225)
T PRK08177          1 KRTALII----GASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA--------L--PGVHIEKLDMNDPASLDQLLQR   66 (225)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh--------c--cccceEEcCCCCHHHHHHHHHH
Confidence            4789999    999999999999999999999999998755432211        1  133444444   5555555543


Q ss_pred             ---CCccEEEeCCCC----------------------ChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCCCC
Q 018900          151 ---VTFDVVLDNNGK----------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       151 ---~~~d~Vi~~a~~----------------------~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                         .++|+|||++|.                      |+.+...+++++...   +..+++++||.  ++.....+. + 
T Consensus        67 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~~~-~-  142 (225)
T PRK08177         67 LQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELPDG-G-  142 (225)
T ss_pred             hhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccCCC-C-
Confidence               358999999873                      233455555554322   23578888874  332211111 1 


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeC
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGS  236 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~  236 (349)
                      ....+..+|.+.+.+.+.       .++.+..++||.+-.+
T Consensus       143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            112344567776666543       2688999999987554

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.20  E-value=5.3e-10  Score=96.81  Aligned_cols=170  Identities=18%  Similarity=0.207  Sum_probs=109.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC-Cc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-TF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~-~~  153 (349)
                      |++|||    ||+|.||++++++|.++ ++|++++|+..                   .++++..|.++++++++.. ++
T Consensus         1 ~~vlIt----Gas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~i   56 (199)
T PRK07578          1 MKILVI----GASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKV   56 (199)
T ss_pred             CeEEEE----cCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCC
Confidence            479999    99999999999999999 99999998752                   1344555778888887765 48


Q ss_pred             cEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCCCCCh
Q 018900          154 DVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (349)
Q Consensus       154 d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k  211 (349)
                      |+|||++|.                    |+.+..++++++...  +..+|+++||.......   +    ....+..+|
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~---~----~~~~Y~~sK  129 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI---P----GGASAATVN  129 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC---C----CchHHHHHH
Confidence            999999983                    234455666655431  23579999985432111   0    111122345


Q ss_pred             HHHHHHHH------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCC
Q 018900          212 VQVEKYIS------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (349)
Q Consensus       212 ~~~ek~~~------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  285 (349)
                      .+++.+.+      ..++++..++||.+-.+..          ..  +..  +.+     ..++..+|+|++++.+++..
T Consensus       130 ~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~----------~~--~~~--~~~-----~~~~~~~~~a~~~~~~~~~~  190 (199)
T PRK07578        130 GALEGFVKAAALELPRGIRINVVSPTVLTESLE----------KY--GPF--FPG-----FEPVPAARVALAYVRSVEGA  190 (199)
T ss_pred             HHHHHHHHHHHHHccCCeEEEEEcCCcccCchh----------hh--hhc--CCC-----CCCCCHHHHHHHHHHHhccc
Confidence            55444332      2478899999998743211          00  000  111     23578999999999999864


Q ss_pred             CccCCCEEEee
Q 018900          286 EAASSNIFNLV  296 (349)
Q Consensus       286 ~~~~~~~~~i~  296 (349)
                      .  .|++|+++
T Consensus       191 ~--~g~~~~~~  199 (199)
T PRK07578        191 Q--TGEVYKVG  199 (199)
T ss_pred             e--eeEEeccC
Confidence            3  35777653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=1.4e-09  Score=97.79  Aligned_cols=198  Identities=10%  Similarity=0.090  Sum_probs=117.3

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||+  +.||+.++++|+++|++|++.+|+.+ ..+       ...++....+..+.+|   +++++++
T Consensus         6 ~~k~~lIt----Gas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~-------~~~~~~~~~~~~~~~Dl~~~~~v~~~   73 (252)
T PRK06079          6 SGKKIVVM----GVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKK-------SLQKLVDEEDLLVECDVASDESIERA   73 (252)
T ss_pred             CCCEEEEe----CCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHH-------HHHhhccCceeEEeCCCCCHHHHHHH
Confidence            46899999    999  79999999999999999999998732 111       1112212234455555   5555554


Q ss_pred             hcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++..     ++|++||++|.                        |+.+...+.+++...  +..++|++||.......  
T Consensus        74 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~--  151 (252)
T PRK06079         74 FATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI--  151 (252)
T ss_pred             HHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC--
Confidence            4321     38999999983                        122233333333221  12589999986532111  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                       +    ....|..+|.+.+.+.+.       .|+++..+.||.+-.+..... ......+......+.         ..+
T Consensus       152 -~----~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~  217 (252)
T PRK06079        152 -P----NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD---------GVG  217 (252)
T ss_pred             -C----cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc---------cCC
Confidence             1    112244567776555432       389999999999866532110 011122222222111         125


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ...+|+|+++..++..... ..|+++.+.++
T Consensus       218 ~~pedva~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        218 VTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             CCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence            6789999999999976533 45677777765

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.17  E-value=3.9e-10  Score=99.59  Aligned_cols=176  Identities=13%  Similarity=0.214  Sum_probs=111.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+++||    ||+|.||++++++|.++|++|++++|+.+...++..       ++   +++++.+|   .++++++++..
T Consensus         1 m~vlIt----Gas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~-------~~---~~~~~~~D~~~~~~v~~~~~~~   66 (223)
T PRK05884          1 VEVLVT----GGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAK-------EL---DVDAIVCDNTDPASLEEARGLF   66 (223)
T ss_pred             CeEEEE----eCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------hc---cCcEEecCCCCHHHHHHHHHHH
Confidence            479999    999999999999999999999999998654432211       11   23455555   66676666532


Q ss_pred             --CccEEEeCCCC-------------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          152 --TFDVVLDNNGK-------------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       152 --~~d~Vi~~a~~-------------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                        ++|.+||+++.                         |+.+...++++    +++  -.++|++||..-       +  
T Consensus        67 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~-------~--  135 (223)
T PRK05884         67 PHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP-------P--  135 (223)
T ss_pred             hhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC-------C--
Confidence              47999999762                         11122233332    332  258999998540       1  


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                        ....|..+|.+.+.+.+.       .++++..+.||.+..+.         .... ...+            .-..+|
T Consensus       136 --~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---------~~~~-~~~p------------~~~~~~  191 (223)
T PRK05884        136 --AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG---------YDGL-SRTP------------PPVAAE  191 (223)
T ss_pred             --CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh---------hhhc-cCCC------------CCCHHH
Confidence              012344567765554432       37899999999875431         1111 0000            126799


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++++..++..+.. .+|+++.+.+|.
T Consensus       192 ia~~~~~l~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        192 IARLALFLTTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             HHHHHHHHcCchhhccCCcEEEeCCCe
Confidence            99999998876543 456888877664

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.17  E-value=4.3e-10  Score=102.61  Aligned_cols=205  Identities=12%  Similarity=0.088  Sum_probs=117.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      |+|.++||    |+ |+||++++++|. +|++|++++|+.+..++..       .++..  ..+.++.+|   .+++.++
T Consensus         1 ~~k~~lIt----Ga-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~i~~~   67 (275)
T PRK06940          1 MKEVVVVI----GA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-------KTLREAGFDVSTQEVDVSSRESVKAL   67 (275)
T ss_pred             CCCEEEEE----CC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEeecCCHHHHHHH
Confidence            56788999    87 789999999996 8999999999865433221       11111  123344444   5666665


Q ss_pred             hcC----CCccEEEeCCCC-------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCC----------CC-
Q 018900          148 VGG----VTFDVVLDNNGK-------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD----------EP-  197 (349)
Q Consensus       148 ~~~----~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~----------~~-  197 (349)
                      ++.    .++|+|||+||.             |+.++.++++++...  ...++|++||........          .. 
T Consensus        68 ~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         68 AATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             HHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccc
Confidence            543    248999999983             455666666655332  113466777654321110          00 


Q ss_pred             -------CC-CC----CCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCc---hHHHHHHHHhCCC
Q 018900          198 -------PH-VE----GDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRP  255 (349)
Q Consensus       198 -------~~-~e----~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~  255 (349)
                             +. .+    .....|..+|.+.+.+.+       ..|+++..+.||.+..+.....+   .......+....+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p  227 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP  227 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC
Confidence                   00 00    012234456666444332       23799999999998766422110   0111222222111


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +         ..+...+|+|++++.++.+... .+|+++.+.++.
T Consensus       228 ~---------~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        228 A---------GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             c---------ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            1         1256789999999998875433 456788877664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.16  E-value=1.1e-10  Score=119.24  Aligned_cols=179  Identities=15%  Similarity=0.144  Sum_probs=115.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+...++....    .. ....+.++.+|   .+++.+++
T Consensus       369 ~~~k~vlIt----Gas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~Dv~~~~~~~~~~  439 (657)
T PRK07201        369 LVGKVVLIT----GASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI----RA-KGGTAHAYTCDLTDSAAVDHTV  439 (657)
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH----Hh-cCCcEEEEEecCCCHHHHHHHH
Confidence            346799999    99999999999999999999999999875443221100    00 01234445555   56666655


Q ss_pred             cCC-----CccEEEeCCCCC----------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGKN----------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~~----------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +..     ++|+|||++|..                      +.+    ++.++..+++.+..+||++||.+.|..... 
T Consensus       440 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  518 (657)
T PRK07201        440 KDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR-  518 (657)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC-
Confidence            432     489999999841                      122    233344556667789999999887754321 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...+..+|.+++.+.+.       .++++++++||.+..+.....            ..   +.    ....+.
T Consensus       519 ------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------------~~---~~----~~~~~~  573 (657)
T PRK07201        519 ------FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------------KR---YN----NVPTIS  573 (657)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------------cc---cc----CCCCCC
Confidence                  11233466666555432       389999999999876543211            00   00    122478


Q ss_pred             HHHHHHHHHHHhcCC
Q 018900          271 VRDLSSMLTLAVENP  285 (349)
Q Consensus       271 v~Dva~~~~~~~~~~  285 (349)
                      .+++|+.++..+.+.
T Consensus       574 ~~~~a~~i~~~~~~~  588 (657)
T PRK07201        574 PEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999988754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.15  E-value=1.1e-09  Score=98.79  Aligned_cols=202  Identities=11%  Similarity=0.094  Sum_probs=116.6

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccC---CCCCCCcc-cceec--CCCeEEEcC---h
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKM---KKPPFNRF-NEIVS--AGGKTVWGD---P  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~---~~~~~~~~-~~l~~--~~~~~~~~D---~  141 (349)
                      ++++||||    ||+|  .||++++++|+++|++|+++.|........   ........ .++..  ..+.++.+|   .
T Consensus         5 ~~k~vlVt----Gas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          5 KNKVAVVT----GVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CCcEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            46899999    9995  899999999999999998876542111000   00000000 11111  134455555   5


Q ss_pred             hhHHhhhcC----C-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccC
Q 018900          142 AEVGNVVGG----V-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       142 ~~l~~~~~~----~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      +++.+++..    . .+|+|||+++.                    |+.+    ++.++..+++.+..+||++||...+.
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            555555432    2 37999999983                    2333    33445555555556999999975432


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...       ....+..+|.+++.+.+.       .+++++.++||.+-.+....    .....+....+.         
T Consensus       161 ~~~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~~---------  220 (256)
T PRK12859        161 PMV-------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFPF---------  220 (256)
T ss_pred             CCC-------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCCC---------
Confidence            111       112233466666555432       47999999999886543221    111122211111         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ..+...+|++++++.++..... .+|+++.+.++
T Consensus       221 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        221 GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            1234679999999998876533 35677777665

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.13  E-value=1.1e-09  Score=101.71  Aligned_cols=156  Identities=13%  Similarity=0.051  Sum_probs=93.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .++++++||    ||+|.||++++++|+++|++|++++|+.+...+....    +.. .....+.++.+|   .+++.++
T Consensus        12 l~gk~~lIT----Gas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~sv~~~   83 (313)
T PRK05854         12 LSGKRAVVT----GASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAA----IRTAVPDAKLSLRALDLSSLASVAAL   83 (313)
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhCCCCceEEEEecCCCHHHHHHH
Confidence            357899999    9999999999999999999999999987544322110    000 011234555565   5555544


Q ss_pred             hcC----C-CccEEEeCCCC-------------------Chhh----HHHHHHHHHhCCCcEEEEeccccc-cCCCCCCC
Q 018900          148 VGG----V-TFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGI-YKPADEPP  198 (349)
Q Consensus       148 ~~~----~-~~d~Vi~~a~~-------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~~~  198 (349)
                      ++.    . ++|++||+||.                   |+.+    ++.++..+++. ..++|++||... ++.....+
T Consensus        84 ~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~  162 (313)
T PRK05854         84 GEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDD  162 (313)
T ss_pred             HHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccc
Confidence            432    1 38999999983                   2333    33344444443 458999998653 33222122


Q ss_pred             CCCCCCC----CCCCChHHHHHHHHh---------hCCcEEEEecCceeeC
Q 018900          199 HVEGDVV----KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGS  236 (349)
Q Consensus       199 ~~e~~~~----~~~~~k~~~ek~~~~---------~~~~~~ilR~~~v~g~  236 (349)
                      +.+....    .|..+|.+.+.+..+         .++.+..+.||.+..+
T Consensus       163 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        163 LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            2222211    223455554443322         2688999999988654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.13  E-value=4.1e-09  Score=93.53  Aligned_cols=185  Identities=15%  Similarity=0.120  Sum_probs=111.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+|+||    ||+|+||++++++|+++|  +.|....|+....             ....++.++.+|   .++++++.+
T Consensus         1 ~~vlIt----Gas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------------~~~~~~~~~~~Dls~~~~~~~~~~   63 (235)
T PRK09009          1 MNILIV----GGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------------FQHDNVQWHALDVTDEAEIKQLSE   63 (235)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------------cccCceEEEEecCCCHHHHHHHHH
Confidence            589999    999999999999999985  5566656644211             112244556666   455555544


Q ss_pred             CC-CccEEEeCCCCCh--------------------------h----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          150 GV-TFDVVLDNNGKNL--------------------------D----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~~~--------------------------~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      .. ++|+|||++|...                          .    .++.++..+++.+..+++++||..  +.....+
T Consensus        64 ~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~~  141 (235)
T PRK09009         64 QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDNR  141 (235)
T ss_pred             hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccCC
Confidence            33 3799999998421                          1    123344445555556899998732  1111111


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh---------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      .  .....+..+|.+++.+.+.         .++.+..+.||.+..+....         .....+         ...++
T Consensus       142 ~--~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~---------~~~~~~---------~~~~~  201 (235)
T PRK09009        142 L--GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP---------FQQNVP---------KGKLF  201 (235)
T ss_pred             C--CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc---------hhhccc---------cCCCC
Confidence            1  1122345577777665543         25778889999886654321         111111         12256


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ..+|+|++++.++..... ..|..+.+.++
T Consensus       202 ~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        202 TPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             CHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            889999999999988643 34566665544

>PRK05855 short chain dehydrogenase; Validated

Probab=99.12  E-value=1.9e-10  Score=115.52  Aligned_cols=193  Identities=17%  Similarity=0.096  Sum_probs=115.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ...+++|||    ||+|+||++++++|.++|++|++++|+.+..+++..       ++.  ..++.++.+|   .+++.+
T Consensus       313 ~~~~~~lv~----G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~Dv~~~~~~~~  381 (582)
T PRK05855        313 FSGKLVVVT----GAGSGIGRETALAFAREGAEVVASDIDEAAAERTAE-------LIRAAGAVAHAYRVDVSDADAMEA  381 (582)
T ss_pred             CCCCEEEEE----CCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHHhcCCeEEEEEcCCCCHHHHHH
Confidence            345789999    999999999999999999999999998654432211       111  1134455555   566655


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~g-v~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|+|||+||.                    |+.++.+++++    +++.+ ..+||++||...|.....
T Consensus       382 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  461 (582)
T PRK05855        382 FAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS  461 (582)
T ss_pred             HHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC
Confidence            55432     37999999983                    44455555543    44444 358999999877654321


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHH---HHHHHhCCCcccCCCCCcce
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWF---FDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  266 (349)
                             ...|..+|.+++.+.+       +.|++++.++||.+-.+..........   ............+.     .
T Consensus       462 -------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  529 (582)
T PRK05855        462 -------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQ-----R  529 (582)
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcc-----c
Confidence                   1224456766555443       238999999999885543211100000   00000000000010     1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      ..+..+|+|+.++.++..+..
T Consensus       530 ~~~~p~~va~~~~~~~~~~~~  550 (582)
T PRK05855        530 RGYGPEKVAKAIVDAVKRNKA  550 (582)
T ss_pred             cCCCHHHHHHHHHHHHHcCCC
Confidence            124679999999999987643

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.12  E-value=2.4e-09  Score=99.63  Aligned_cols=110  Identities=21%  Similarity=0.209  Sum_probs=72.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      |++++|||    ||++.||.+++++|+++| ++|++++|+.+...++....    . .....+.++.+|   .++++.++
T Consensus         2 ~~k~vlIT----Gas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l----~-~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         2 QKPTVIIT----GASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL----G-MPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh----c-CCCCeEEEEEcCCCCHHHHHHHH
Confidence            56789999    999999999999999999 99999999875443221110    0 011234445555   45555444


Q ss_pred             cC-----CCccEEEeCCCC---------------------Chhh----HHHHHHHHHhCC--CcEEEEecccccc
Q 018900          149 GG-----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIY  191 (349)
Q Consensus       149 ~~-----~~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~g--v~~~i~~Ss~~vy  191 (349)
                      ..     .++|++||+||.                     |+.+    ++.++..+++.+  ..++|++||...+
T Consensus        73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence            32     248999999983                     1222    344455665543  4699999997654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.10  E-value=7e-10  Score=100.63  Aligned_cols=201  Identities=12%  Similarity=0.096  Sum_probs=113.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhh----HHh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAE----VGN  146 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~----l~~  146 (349)
                      +.+|||    ||+|+||++++++|+++|++|+++.|.. +....+..    .+.......+..+.+|   .+.    +++
T Consensus         2 ~~~lIT----Gas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~   73 (267)
T TIGR02685         2 PAAVVT----GAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAA----ELNARRPNSAVTCQADLSNSATLFSRCEA   73 (267)
T ss_pred             CEEEEe----CCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH----HHHhccCCceEEEEccCCCchhhHHHHHH
Confidence            469999    9999999999999999999999987643 22221100    0000001122334455   332    233


Q ss_pred             hh----cCC-CccEEEeCCCCC-------------------------------hhhHHHHHHHH----HhCC------Cc
Q 018900          147 VV----GGV-TFDVVLDNNGKN-------------------------------LDAVRPVADWA----KSSG------VK  180 (349)
Q Consensus       147 ~~----~~~-~~d~Vi~~a~~~-------------------------------~~~~~~ll~~a----~~~g------v~  180 (349)
                      ++    +.. ++|+|||+||..                               +.+...+++++    +..+      ..
T Consensus        74 ~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~  153 (267)
T TIGR02685        74 IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNL  153 (267)
T ss_pred             HHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCe
Confidence            33    222 489999999831                               11233333332    2211      23


Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC
Q 018900          181 QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK  253 (349)
Q Consensus       181 ~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~  253 (349)
                      ++|.++|......     ..  ....+..+|.+++.+.+.       .|+++..++||.+..+....   ..........
T Consensus       154 ~iv~~~s~~~~~~-----~~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---~~~~~~~~~~  223 (267)
T TIGR02685       154 SIVNLCDAMTDQP-----LL--GFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---FEVQEDYRRK  223 (267)
T ss_pred             EEEEehhhhccCC-----Cc--ccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---hhHHHHHHHh
Confidence            6787777543211     11  112344578777665543       38999999999986553211   1112222221


Q ss_pred             CCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       254 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .++   +     ..+...+|++++++.++.+... .+|+.+.+.++..+
T Consensus       224 ~~~---~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       224 VPL---G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             CCC---C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence            111   0     1235789999999999986543 45688888777544

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.05  E-value=8.1e-10  Score=107.87  Aligned_cols=198  Identities=15%  Similarity=0.130  Sum_probs=116.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC--cccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +++++|||    ||+|.||..++++|.++|++|++++|....  ..++.       .++....+.++..|.+++.++++.
T Consensus       209 ~g~~vlIt----GasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~-------~~~~~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        209 AGKVALVT----GAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVA-------NRVGGTALALDITAPDAPARIAEH  277 (450)
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHH-------HHcCCeEEEEeCCCHHHHHHHHHH
Confidence            46899999    999999999999999999999999885321  11110       011101123334455665555542


Q ss_pred             C-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCC----CcEEEEeccccc-cCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG----VKQFLFISSAGI-YKPADEPPHV  200 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~g----v~~~i~~Ss~~v-y~~~~~~~~~  200 (349)
                      .     ++|+|||+++.                    |+.++.++.+++....    ..+||++||... ++....    
T Consensus       278 ~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~----  353 (450)
T PRK08261        278 LAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ----  353 (450)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC----
Confidence            2     47999999983                    4556777777775532    268999999653 332211    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                          ..|..+|...+.+.+       +.++.+..+.||.+-.+....  +........+.  .....      .....+|
T Consensus       354 ----~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~--~~~~~~~~~~~--~~~l~------~~~~p~d  419 (450)
T PRK08261        354 ----TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA--IPFATREAGRR--MNSLQ------QGGLPVD  419 (450)
T ss_pred             ----hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc--cchhHHHHHhh--cCCcC------CCCCHHH
Confidence                122334554433332       348899999999874322111  00001111111  00011      1124579


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++++..++..... .+|+++.++++.
T Consensus       420 va~~~~~l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        420 VAETIAWLASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             HHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            99999988875432 456888887654

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.04  E-value=2.6e-09  Score=97.96  Aligned_cols=197  Identities=15%  Similarity=0.178  Sum_probs=114.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC---------CCcccCCCCCCCcccceec--CCCeEEEcC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVS--AGGKTVWGD-  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~~~~~~~~~~~~~l~~--~~~~~~~~D-  140 (349)
                      +++++|||    ||++.||+.++++|+++|++|++++|+.         +...+.       ..++..  ..+.++.+| 
T Consensus         5 ~~k~~lIT----Gas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~Dv   73 (286)
T PRK07791          5 DGRVVIVT----GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAV-------VDEIVAAGGEAVANGDDI   73 (286)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHH-------HHHHHhcCCceEEEeCCC
Confidence            46899999    9999999999999999999999998764         111110       011111  123344445 


Q ss_pred             --hhhHHhhhcC----C-CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCC------CcEEE
Q 018900          141 --PAEVGNVVGG----V-TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSG------VKQFL  183 (349)
Q Consensus       141 --~~~l~~~~~~----~-~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~g------v~~~i  183 (349)
                        .+++.++++.    . ++|++||+||.                    |+.+...+.+    .+++.+      ..+||
T Consensus        74 ~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv  153 (286)
T PRK07791         74 ADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARII  153 (286)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEE
Confidence              5555554432    2 48999999983                    3344444443    333321      24899


Q ss_pred             EeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc
Q 018900          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV  256 (349)
Q Consensus       184 ~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~  256 (349)
                      ++||...+....       ....|..+|.+++.+.+       ..|+++..|.|+ +..+     +............+ 
T Consensus       154 ~isS~~~~~~~~-------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~~~~~~~~~~~~-  219 (286)
T PRK07791        154 NTSSGAGLQGSV-------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-----MTETVFAEMMAKPE-  219 (286)
T ss_pred             EeCchhhCcCCC-------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-----cchhhHHHHHhcCc-
Confidence            999854322111       11223446666554433       248999999997 4221     11111222211111 


Q ss_pred             ccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       257 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                          .+  ...+...+|++++++.++..... .+|+.+.+.++..
T Consensus       220 ----~~--~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        220 ----EG--EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             ----cc--ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence                01  11345789999999999876533 4568888877753

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.03  E-value=4.6e-09  Score=94.16  Aligned_cols=170  Identities=14%  Similarity=0.069  Sum_probs=100.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ..+++++|||    ||+|+||++++++|+++|++|++++|+.....+...       +.....+.++..|.+++.+.+..
T Consensus        11 ~l~~k~~lIT----Gas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~   79 (245)
T PRK12367         11 TWQGKRIGIT----GASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-------ESPNEWIKWECGKEESLDKQLAS   79 (245)
T ss_pred             hhCCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-------cCCCeEEEeeCCCHHHHHHhcCC
Confidence            4456899999    999999999999999999999999997622111000       00001123344456667666654


Q ss_pred             CCccEEEeCCCC-----------------ChhhHHHHHHHH----HhC---CCcEEEEeccccccCCCCCCCCCCCCCCC
Q 018900          151 VTFDVVLDNNGK-----------------NLDAVRPVADWA----KSS---GVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (349)
Q Consensus       151 ~~~d~Vi~~a~~-----------------~~~~~~~ll~~a----~~~---gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~  206 (349)
                        +|++||+||.                 |+.+..++++++    ++.   +-..++..||.+....    +    ....
T Consensus        80 --iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~----~----~~~~  149 (245)
T PRK12367         80 --LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP----A----LSPS  149 (245)
T ss_pred             --CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC----C----CCch
Confidence              6999999983                 455555555544    331   1123434444332211    1    1123


Q ss_pred             CCCChHHHHHHH---H-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          207 PDAGHVQVEKYI---S-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       207 ~~~~k~~~ek~~---~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      |..+|.+++.+.   +       ..++.+..+.||.+..+.                .+          ...+..+|+|+
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~----------------~~----------~~~~~~~~vA~  203 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL----------------NP----------IGIMSADFVAK  203 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc----------------Cc----------cCCCCHHHHHH
Confidence            455676653221   1       136667777776542110                00          11467899999


Q ss_pred             HHHHHhcCCCc
Q 018900          277 MLTLAVENPEA  287 (349)
Q Consensus       277 ~~~~~~~~~~~  287 (349)
                      .++.++++...
T Consensus       204 ~i~~~~~~~~~  214 (245)
T PRK12367        204 QILDQANLGLY  214 (245)
T ss_pred             HHHHHHhcCCc
Confidence            99999987654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.02  E-value=1.4e-08  Score=91.82  Aligned_cols=198  Identities=13%  Similarity=0.170  Sum_probs=114.9

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      +++.+|||    ||  ++.||++++++|+++|++|++..|.....+.+        .++..  .....+.+|   +++++
T Consensus         5 ~~k~~lIT----Ga~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~Dv~~~~~v~   72 (261)
T PRK08690          5 QGKKILIT----GMISERSIAYGIAKACREQGAELAFTYVVDKLEERV--------RKMAAELDSELVFRCDVASDDEIN   72 (261)
T ss_pred             CCcEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHH--------HHHHhccCCceEEECCCCCHHHHH
Confidence            46789999    97  67999999999999999999887653211111        11100  012234444   66666


Q ss_pred             hhhcCC-----CccEEEeCCCCC-------------------------hhhHHHHHH----HHHhCCCcEEEEecccccc
Q 018900          146 NVVGGV-----TFDVVLDNNGKN-------------------------LDAVRPVAD----WAKSSGVKQFLFISSAGIY  191 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~~-------------------------~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy  191 (349)
                      ++++..     ++|++||+||..                         +.+...+.+    .+++.+ .++|++||.+.+
T Consensus        73 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~  151 (261)
T PRK08690         73 QVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAV  151 (261)
T ss_pred             HHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccc
Confidence            555322     489999999842                         111112222    223222 589999986543


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCC
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      ...   |    ....|..+|.+++.+.+       ..|+++..+.||.+-.+...... .....+.+....++       
T Consensus       152 ~~~---~----~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-------  217 (261)
T PRK08690        152 RAI---P----NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL-------  217 (261)
T ss_pred             cCC---C----CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC-------
Confidence            211   1    12234557877665543       34899999999998654211100 01111112111111       


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                        ..+...+|+|++++.++.++.. ..|+++.+.+|.
T Consensus       218 --~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        218 --RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             --CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence              1256789999999999987543 456788877764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.01  E-value=5.3e-09  Score=94.47  Aligned_cols=200  Identities=10%  Similarity=0.104  Sum_probs=115.0

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      +++.+|||    ||+  +.||+.++++|.++|++|++..|+.+..+..     ....++..  ..+..+.+|   ++++.
T Consensus         5 ~~k~~lIt----Gas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~d~~~v~   75 (258)
T PRK07370          5 TGKKALVT----GIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFE-----KKVRELTEPLNPSLFLPCDVQDDAQIE   75 (258)
T ss_pred             CCcEEEEe----CCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHH-----HHHHHHHhccCcceEeecCcCCHHHHH
Confidence            46789999    986  7999999999999999998887654321100     00111111  112334444   56666


Q ss_pred             hhhcCC-----CccEEEeCCCCC------------------------hhh----HHHHHHHHHhCCCcEEEEeccccccC
Q 018900          146 NVVGGV-----TFDVVLDNNGKN------------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~~------------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ++++..     ++|++||++|..                        +.+    ++.++..+++.  .++|++||.....
T Consensus        76 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g~Iv~isS~~~~~  153 (258)
T PRK07370         76 ETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--GSIVTLTYLGGVR  153 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--CeEEEEecccccc
Confidence            555432     489999999831                        222    23344444442  5899999864321


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .     .  .....|..+|.+++.+.+.       .|+++..+.||.+-.+.... .-.....+.+....++        
T Consensus       154 ~-----~--~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------  218 (258)
T PRK07370        154 A-----I--PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL--------  218 (258)
T ss_pred             C-----C--cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc--------
Confidence            1     1  1112344567666554432       37899999999986653210 0001111111111111        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                       ..+...+|+++++..++.++.. ..|+++.+.++.
T Consensus       219 -~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        219 -RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             -CcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence             1355679999999999986543 455778777653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.01  E-value=6.9e-10  Score=103.44  Aligned_cols=179  Identities=15%  Similarity=0.130  Sum_probs=107.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----h---hhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----P---AEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~---~~l  144 (349)
                      .++.++||    ||+|.||++++++|.++|++|++++|+.+..+++.......+.   ...+..+.+|     .   +.+
T Consensus        52 ~g~~~lIT----GAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~~~~~~l  124 (320)
T PLN02780         52 YGSWALVT----GPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS---KTQIKTVVVDFSGDIDEGVKRI  124 (320)
T ss_pred             cCCEEEEe----CCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC---CcEEEEEEEECCCCcHHHHHHH
Confidence            36789999    9999999999999999999999999987654432211000000   0122233333     1   223


Q ss_pred             HhhhcCCCccEEEeCCCC----------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK----------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~----------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      .+.+.+..+|++||+||.                      |+.++..    ++..+++.+..++|++||...+.... .|
T Consensus       125 ~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~-~p  203 (320)
T PLN02780        125 KETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS-DP  203 (320)
T ss_pred             HHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-Cc
Confidence            334444456799999983                      2223333    44445556677999999976532110 01


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....|..+|..++.+.+.       .|+++..++||.+-.+...          . ....          .-.+..
T Consensus       204 ----~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----------~-~~~~----------~~~~~p  258 (320)
T PLN02780        204 ----LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----------I-RRSS----------FLVPSS  258 (320)
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----------c-cCCC----------CCCCCH
Confidence                112233456655444332       3899999999998654211          0 0000          113478


Q ss_pred             HHHHHHHHHHhcC
Q 018900          272 RDLSSMLTLAVEN  284 (349)
Q Consensus       272 ~Dva~~~~~~~~~  284 (349)
                      +++|+.++..+..
T Consensus       259 ~~~A~~~~~~~~~  271 (320)
T PLN02780        259 DGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999964

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.01  E-value=1.2e-08  Score=92.06  Aligned_cols=202  Identities=10%  Similarity=0.072  Sum_probs=113.5

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|.++||    ||+  +.||++++++|+++|++|++.+|+....+.+...    ..++...++..+.+|   +++++++
T Consensus         6 ~~k~~lIt----Ga~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~   77 (257)
T PRK08594          6 EGKTYVVM----GVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVREL----ADTLEGQESLLLPCDVTSDEEITAC   77 (257)
T ss_pred             CCCEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHH----HHHcCCCceEEEecCCCCHHHHHHH
Confidence            46789999    997  8999999999999999999988753211111000    011111234445555   5555554


Q ss_pred             hc----CC-CccEEEeCCCCC------------------------hhhHHHHHHHHHhC--CCcEEEEeccccccCCCCC
Q 018900          148 VG----GV-TFDVVLDNNGKN------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~----~~-~~d~Vi~~a~~~------------------------~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++    .. ++|++||+++..                        +.+...+++++...  .-.++|++||......   
T Consensus        78 ~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~---  154 (257)
T PRK08594         78 FETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV---  154 (257)
T ss_pred             HHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC---
Confidence            43    22 389999998731                        11222222322211  1258999998643211   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                        .  .....|..+|.+++.+.+.       .|+++..+.||.+-.+..... -.......+....+         ...+
T Consensus       155 --~--~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~  221 (257)
T PRK08594        155 --V--QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAP---------LRRT  221 (257)
T ss_pred             --C--CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCC---------cccc
Confidence              1  0112345577776655432       379999999998865421100 00011111111111         1124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ...+|++++++.++..... ..|+++.+.++
T Consensus       222 ~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        222 TTQEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             CCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence            6789999999999876543 45577777665

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.00  E-value=2e-08  Score=91.41  Aligned_cols=201  Identities=15%  Similarity=0.139  Sum_probs=114.9

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~l~~~~~  149 (349)
                      ++|.+|||    ||++  .||+.++++|+++|++|++..|+....+.+...    ..++.. ..+.++..|.++++++++
T Consensus         6 ~~k~~lVT----Gas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~----~~~~g~~~~~~~Dv~d~~~v~~~~~   77 (271)
T PRK06505          6 QGKRGLIM----GVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPL----AESLGSDFVLPCDVEDIASVDAVFE   77 (271)
T ss_pred             CCCEEEEe----CCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHH----HHhcCCceEEeCCCCCHHHHHHHHH
Confidence            35789999    9997  999999999999999999998864221111000    000000 012233334566655554


Q ss_pred             CC-----CccEEEeCCCCC------------------------hhhHHHHH----HHHHhCCCcEEEEeccccccCCCCC
Q 018900          150 GV-----TFDVVLDNNGKN------------------------LDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~~------------------------~~~~~~ll----~~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ..     ++|++||+||..                        +.+..+++    ..+++ + .++|++||......   
T Consensus        78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~-G~Iv~isS~~~~~~---  152 (271)
T PRK06505         78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G-GSMLTLTYGGSTRV---  152 (271)
T ss_pred             HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C-ceEEEEcCCCcccc---
Confidence            32     489999999831                        12222233    33332 2 58999998643211   


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      .|    ....|..+|.+++.+.+.       .|+++..|.||.+-.+..... -............++         ..+
T Consensus       153 ~~----~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~  219 (271)
T PRK06505        153 MP----NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRT  219 (271)
T ss_pred             CC----ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------ccc
Confidence            11    112345577775554432       389999999999866532110 000011111111111         124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|++++.++.+... .+|+++.+.++.
T Consensus       220 ~~peeva~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        220 VTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             CCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence            5789999999999876543 456788887764

>PRK06484 short chain dehydrogenase; Validated

Probab=98.98  E-value=5.7e-09  Score=103.76  Aligned_cols=185  Identities=13%  Similarity=0.154  Sum_probs=110.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~  149 (349)
                      +++++|||    ||++.||..++++|.++|++|++++|+.+...++...       + ...+..+.+   |++++.+++.
T Consensus         4 ~~k~~lIT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          4 QSRVVLVT----GAAGGIGRAACQRFARAGDQVVVADRNVERARERADS-------L-GPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCeEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h-CCceeEEEeccCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322111       1 112233444   4666666654


Q ss_pred             CC-----CccEEEeCCCC----------------------Chhh----HHHHHHHHHhCCCc-EEEEeccccccCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEP  197 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~----------------------~~~~----~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~  197 (349)
                      ..     ++|++||++|.                      |+.+    ++.++..+++.+.. ++|++||........  
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~--  149 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP--  149 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC--
Confidence            32     48999999884                      1222    33344444444443 899999865432211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-HHH-HHHHHhCCCcccCCCCCcceee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWF-FDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                           ....|..+|.+++.+.+.       .+++++.++||.+..+......- ... ...+....+         ...+
T Consensus       150 -----~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  215 (520)
T PRK06484        150 -----KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIP---------LGRL  215 (520)
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCC---------CCCC
Confidence                 112234567776665432       37999999999885543211000 000 000111000         0124


Q ss_pred             eeHHHHHHHHHHHhcCC
Q 018900          269 AHVRDLSSMLTLAVENP  285 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~  285 (349)
                      ...+|+++++..++...
T Consensus       216 ~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        216 GRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             cCHHHHHHHHHHHhCcc
Confidence            57899999999888753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.98  E-value=1.2e-08  Score=92.18  Aligned_cols=198  Identities=14%  Similarity=0.168  Sum_probs=113.7

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|.+|||    ||+  +.||++++++|+++|++|++++|+.+..+.+...    ..++.  ....+.+|   .++++++
T Consensus         9 ~~k~~lIt----Gas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~----~~~~~--~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          9 AGKRGLVV----GIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPL----AEELD--APIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----HHhhc--cceEEecCcCCHHHHHHH
Confidence            46899999    998  5999999999999999999999875321111000    00110  12234444   5555555


Q ss_pred             hcCC-----CccEEEeCCCC------------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCC
Q 018900          148 VGGV-----TFDVVLDNNGK------------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~------------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      ++..     ++|++||+||.                        |+.+.    +.++..+++ + .++|++||.+.... 
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-~-g~Ii~iss~~~~~~-  155 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-G-GSLLTMSYYGAEKV-  155 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-C-CEEEEEeccccccC-
Confidence            4322     48999999973                        12222    233334432 2 47999998643211 


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                          .  .....+..+|.+++.+.+       ..++++..+.||.+-.+.... .......+.+....+.         .
T Consensus       156 ----~--~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  220 (258)
T PRK07533        156 ----V--ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL---------R  220 (258)
T ss_pred             ----C--ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc---------C
Confidence                1  111223456766544433       247999999999886543211 0011122222222111         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCC
Q 018900          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSD  298 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~  298 (349)
                      .+...+|++++++.++.++. ...|+.+.+.++
T Consensus       221 r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        221 RLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             CCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence            24678999999999987653 345677877665

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.94  E-value=1.9e-08  Score=91.68  Aligned_cols=199  Identities=14%  Similarity=0.126  Sum_probs=115.1

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCC---CcccCCCCCCCcccceecCCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l  144 (349)
                      ++|++|||    ||+  +.||.+++++|+++|++|++..|+..   ..+++..       ++.  ....+.+|   ++++
T Consensus         9 ~~k~~lIt----Gas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~-------~~~--~~~~~~~Dl~~~~~v   75 (272)
T PRK08159          9 AGKRGLIL----GVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAA-------ELG--AFVAGHCDVTDEASI   75 (272)
T ss_pred             cCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHH-------hcC--CceEEecCCCCHHHH
Confidence            45789999    997  89999999999999999998887531   1111111       110  12234444   5666


Q ss_pred             HhhhcC----C-CccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          145 GNVVGG----V-TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~----~-~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                      +++++.    . ++|++||+||.                        |+.+...+++++...  +-.++|++||.+.+..
T Consensus        76 ~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~  155 (272)
T PRK08159         76 DAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV  155 (272)
T ss_pred             HHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC
Confidence            655442    2 38999999973                        223344444443321  2258999998643221


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      .   |    ....|..+|.+++.+.+.       .++++..+.||.+..+.....--.......... ..+       ..
T Consensus       156 ~---p----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p-------~~  220 (272)
T PRK08159        156 M---P----HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEY-NAP-------LR  220 (272)
T ss_pred             C---C----cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHh-CCc-------cc
Confidence            1   1    112344577776554432       378999999998865321100000001111110 111       01


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+...+|+|++++.++..... .+|+++.+.++.
T Consensus       221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             ccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence            246789999999999986543 456888888875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.94  E-value=6.5e-09  Score=93.51  Aligned_cols=135  Identities=21%  Similarity=0.220  Sum_probs=90.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC-CCeEEEcC---hhhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D---~~~l~~  146 (349)
                      ...+|.|+||    ||+..||.+++++|.++|..++.+.|.....+.+...    +.++... ++.++.+|   .+++.+
T Consensus         9 ~~~~kvVvIT----GASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~----l~~~~~~~~v~~~~~Dvs~~~~~~~   80 (282)
T KOG1205|consen    9 RLAGKVVLIT----GASSGIGEALAYELAKRGAKLVLVARRARRLERVAEE----LRKLGSLEKVLVLQLDVSDEESVKK   80 (282)
T ss_pred             HhCCCEEEEe----CCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHH----HHHhCCcCccEEEeCccCCHHHHHH
Confidence            3457899999    9999999999999999999888888876555443111    1112222 36666776   455554


Q ss_pred             hh----cCC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VV----GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~----~~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      .+    ... ++|++||+||.                    |+-|    |+.++..+++.+-.|+|.+||+.-+-.   .
T Consensus        81 ~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~---~  157 (282)
T KOG1205|consen   81 FVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP---L  157 (282)
T ss_pred             HHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC---C
Confidence            43    333 37999999993                    3333    666777778877779999999653221   2


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE  220 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~  220 (349)
                      |...    .|.++|++++.+.+-
T Consensus       158 P~~~----~Y~ASK~Al~~f~et  176 (282)
T KOG1205|consen  158 PFRS----IYSASKHALEGFFET  176 (282)
T ss_pred             Cccc----ccchHHHHHHHHHHH
Confidence            2222    455689888776653

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.93  E-value=5.9e-09  Score=87.54  Aligned_cols=143  Identities=15%  Similarity=0.190  Sum_probs=92.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++|+    ||+|++|.+++++|.++|+ .|+++.|+.+.......    ...++.  ...+.++.+|   ++++.+++
T Consensus         1 ~~~li~----Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (180)
T smart00822        1 GTYLIT----GGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE----LLAELEALGAEVTVVACDVADRAALAAAL   72 (180)
T ss_pred             CEEEEE----cCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH----HHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            479999    9999999999999999986 68888887643321100    001111  1233455565   44555554


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEG  202 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~e~  202 (349)
                      ...     .+|.|||+++.                    |+.+..++++++++.+.+++|++||.. .++...       
T Consensus        73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~-------  145 (180)
T smart00822       73 AAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPG-------  145 (180)
T ss_pred             HHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCC-------
Confidence            332     36999999972                    456788888888887888999999854 334321       


Q ss_pred             CCCCCCCChHHHHHHHH---hhCCcEEEEecCce
Q 018900          203 DVVKPDAGHVQVEKYIS---ENFSNWASFRPQYM  233 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~---~~~~~~~ilR~~~v  233 (349)
                       ...+..+|...+.+++   ..+++.+.+.||.+
T Consensus       146 -~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      146 -QANYAAANAFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             -chhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence             1123345666666654   34888888887765

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.93  E-value=4.6e-08  Score=81.76  Aligned_cols=198  Identities=15%  Similarity=0.186  Sum_probs=123.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHh-
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGN-  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~-  146 (349)
                      .+.+..+||    ||+..||+++++.|.++|++|.+.+++...++....       +|.. -+.-.+.+|   .++++. 
T Consensus        12 ~~sk~~~vt----Gg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~-------~L~g~~~h~aF~~DVS~a~~v~~~   80 (256)
T KOG1200|consen   12 LMSKVAAVT----GGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAG-------DLGGYGDHSAFSCDVSKAHDVQNT   80 (256)
T ss_pred             HhcceeEEe----cCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHh-------hcCCCCccceeeeccCcHHHHHHH
Confidence            356789999    999999999999999999999999998765443221       1111 112233344   344333 


Q ss_pred             ---hhcCC-CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC--CcEEEEeccc-cccCCCC
Q 018900          147 ---VVGGV-TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG--VKQFLFISSA-GIYKPAD  195 (349)
Q Consensus       147 ---~~~~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~g--v~~~i~~Ss~-~vy~~~~  195 (349)
                         ..+.. .++++++|||+                    |+.++.-+.+++-    ..+  --++|.+||+ +--|+-.
T Consensus        81 l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G  160 (256)
T KOG1200|consen   81 LEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG  160 (256)
T ss_pred             HHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc
Confidence               33333 38999999994                    3444333333332    222  2389999994 3223222


Q ss_pred             CCCCCCCCCCCCCCChH-------HHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          196 EPPHVEGDVVKPDAGHV-------QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~-------~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      +.        .|.++|.       .+.+.+...++++..+-||+|--|... .+.+...+.+...-|.-.+|        
T Consensus       161 Qt--------nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~-~mp~~v~~ki~~~iPmgr~G--------  223 (256)
T KOG1200|consen  161 QT--------NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE-AMPPKVLDKILGMIPMGRLG--------  223 (256)
T ss_pred             ch--------hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhh-hcCHHHHHHHHccCCccccC--------
Confidence            11        1112222       234455566899999999998776543 24556677777776665555        


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                       ..+|+|..++.+..+... ..|..+.+.+|
T Consensus       224 -~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  224 -EAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             -CHHHHHHHHHHHhccccccccceeEEEecc
Confidence             468999999888865543 24577877766

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.93  E-value=1.3e-08  Score=92.76  Aligned_cols=199  Identities=13%  Similarity=0.133  Sum_probs=114.0

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCC---CcccCCCCCCCcccceec-CCCeEEEcChhhHHh
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~---~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~l~~  146 (349)
                      ++|.||||    ||+  +.||+.++++|+++|++|++.+|+.+   ..+++..       ++.. ..+.++..|.+++.+
T Consensus         4 ~~k~~lIt----Gas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~   72 (274)
T PRK08415          4 KGKKGLIV----GVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQ-------ELGSDYVYELDVSKPEHFKS   72 (274)
T ss_pred             CCcEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHH-------hcCCceEEEecCCCHHHHHH
Confidence            46899999    997  79999999999999999999998742   1111110       1100 012333444555555


Q ss_pred             hhcCC-----CccEEEeCCCCC------------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          147 VVGGV-----TFDVVLDNNGKN------------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~~------------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +++..     ++|++||+||..                        +.+    ++.++..+++.  .++|++||.+-...
T Consensus        73 ~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~  150 (274)
T PRK08415         73 LAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKY  150 (274)
T ss_pred             HHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccC
Confidence            54322     489999999831                        222    33334444432  58999998643211


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                         .+    ....|..+|.+++.+.+.       .|+++..+.||.+..+.... . ..+ ...........+     ..
T Consensus       151 ---~~----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~-~~~-~~~~~~~~~~~p-----l~  215 (274)
T PRK08415        151 ---VP----HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-I-GDF-RMILKWNEINAP-----LK  215 (274)
T ss_pred             ---CC----cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-c-chh-hHHhhhhhhhCc-----hh
Confidence               11    112244567665444332       37899999999886542110 0 000 000000000001     11


Q ss_pred             eeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      .+...+|++++++.++.+.. ..+|+++.+.+|.
T Consensus       216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence            24678999999999998653 3456788887774

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.93  E-value=1.7e-08  Score=91.32  Aligned_cols=199  Identities=12%  Similarity=0.082  Sum_probs=114.1

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCC---cccCCCCCCCcccceecCCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDEN---SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~  147 (349)
                      ++|.+|||    ||++  .||+.++++|.++|++|++.+|+...   .+++...    ...  ...++++..|+++++++
T Consensus         7 ~~k~~lIT----Gas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~----~g~--~~~~~~Dv~~~~~v~~~   76 (260)
T PRK06603          7 QGKKGLIT----GIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE----IGC--NFVSELDVTNPKSISNL   76 (260)
T ss_pred             CCcEEEEE----CCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh----cCC--ceEEEccCCCHHHHHHH
Confidence            45789999    9997  79999999999999999988886311   1111100    000  00123334456666655


Q ss_pred             hcC----C-CccEEEeCCCCC------------------------hhhHHHHHH----HHHhCCCcEEEEeccccccCCC
Q 018900          148 VGG----V-TFDVVLDNNGKN------------------------LDAVRPVAD----WAKSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       148 ~~~----~-~~d~Vi~~a~~~------------------------~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      ++.    . ++|++||+++..                        +.+...+++    .+++  -.++|++||.......
T Consensus        77 ~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~  154 (260)
T PRK06603         77 FDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVI  154 (260)
T ss_pred             HHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCC
Confidence            532    2 389999998731                        112222222    2322  2589999986532111


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                         +    ....|..+|.+++.+.+       ..++++..+.||.+-.+.... .-.......+....|+         .
T Consensus       155 ---~----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  218 (260)
T PRK06603        155 ---P----NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL---------K  218 (260)
T ss_pred             ---C----cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc---------C
Confidence               1    11234567777655443       247999999999886542110 0001111222221111         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+...+|+|++++.++.++.. .+|+.+.+.+|.
T Consensus       219 r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        219 RNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcceEEEeCCcc
Confidence            246789999999999987543 356778777663

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.91  E-value=3e-08  Score=89.63  Aligned_cols=201  Identities=13%  Similarity=0.129  Sum_probs=112.7

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCC---CCcccCCCCCCCcccceecCCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~  147 (349)
                      ++++||||    ||  ++.||.+++++|+++|++|++..|..   +..+++...    +..  ...+.++..|+++++++
T Consensus         5 ~~k~vlIt----Gas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          5 AGKRILIT----GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE----FGS--DLVFPCDVASDEQIDAL   74 (260)
T ss_pred             CCcEEEEe----CCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHh----cCC--cceeeccCCCHHHHHHH
Confidence            46789999    96  67999999999999999999886542   211111100    000  00123344456666666


Q ss_pred             hcCC-----CccEEEeCCCCC-------------------------hhhHHHHHHHHHh--CCCcEEEEeccccccCCCC
Q 018900          148 VGGV-----TFDVVLDNNGKN-------------------------LDAVRPVADWAKS--SGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~--~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ++..     ++|++||+||..                         +.+...+.+++..  .+..++|++||......  
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~--  152 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV--  152 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC--
Confidence            5432     389999999741                         1112222222211  12258999998653211  


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCccee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                       .+    ....|..+|.+++.+.+.       .|+++..+.||.+-.+..... -.....+.+....++         ..
T Consensus       153 -~~----~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r  218 (260)
T PRK06997        153 -VP----NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL---------RR  218 (260)
T ss_pred             -CC----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc---------cc
Confidence             11    111244567665554432       378999999998865421110 001111111111111         12


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +...+|+++++..++.++.. .+|+++.+.++.
T Consensus       219 ~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        219 NVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             cCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence            46789999999999987533 456788777664

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.90  E-value=3.9e-08  Score=89.06  Aligned_cols=198  Identities=12%  Similarity=0.119  Sum_probs=112.9

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCC---CcccCCCCCCCcccceecCCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l  144 (349)
                      +++++|||    ||++  .||+.++++|+++|++|++.+|+..   ..+++...       .  .....+.+|   ++++
T Consensus         5 ~~k~~lIT----Gas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~-------~--~~~~~~~~Dl~~~~~v   71 (262)
T PRK07984          5 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ-------L--GSDIVLPCDVAEDASI   71 (262)
T ss_pred             CCCEEEEe----CCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc-------c--CCceEeecCCCCHHHH
Confidence            35789999    9985  8999999999999999998888631   11111100       0  112334444   6666


Q ss_pred             HhhhcC----C-CccEEEeCCCCC-------------------------hhhHHHHHHHHHhC--CCcEEEEeccccccC
Q 018900          145 GNVVGG----V-TFDVVLDNNGKN-------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYK  192 (349)
Q Consensus       145 ~~~~~~----~-~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~  192 (349)
                      ++++..    . ++|++||++|..                         +.+...+.+++...  +-.++|++||.+.+.
T Consensus        72 ~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~  151 (262)
T PRK07984         72 DAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER  151 (262)
T ss_pred             HHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC
Confidence            655532    2 389999999831                         11222233332211  125799999865321


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .     .  .....|..+|.+.+.+.+.       .++++..+.||.+.-+.... .-.......+....+.        
T Consensus       152 ~-----~--~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------  216 (262)
T PRK07984        152 A-----I--PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------  216 (262)
T ss_pred             C-----C--CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC--------
Confidence            1     1  1122344567776554432       37899999999885532110 0001111111111111        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                       ..+...+|++++++.++.+... ..|+++.+.++.
T Consensus       217 -~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        217 -RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             -cCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence             1246789999999999876533 455777777663

>PRK05599 hypothetical protein; Provisional

Probab=98.89  E-value=2e-08  Score=90.01  Aligned_cols=184  Identities=16%  Similarity=0.178  Sum_probs=109.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC-
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~-  150 (349)
                      |.||||    ||++.||+.++++|. +|++|++++|+.+..+++...    +.+.....+.++.+|   ++++++++.. 
T Consensus         1 ~~vlIt----Gas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   71 (246)
T PRK05599          1 MSILIL----GGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASD----LRQRGATSVHVLSFDAQDLDTHRELVKQT   71 (246)
T ss_pred             CeEEEE----eCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHH----HHhccCCceEEEEcccCCHHHHHHHHHHH
Confidence            579999    999999999999998 599999999987655432111    001111124445555   5555544332 


Q ss_pred             ---C-CccEEEeCCCCC--------------------hhhH----HHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCC
Q 018900          151 ---V-TFDVVLDNNGKN--------------------LDAV----RPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 ---~-~~d~Vi~~a~~~--------------------~~~~----~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                         . ++|++||++|..                    +.+.    +.++..+++.+ -.++|++||...+-..   +   
T Consensus        72 ~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---~---  145 (246)
T PRK05599         72 QELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR---R---  145 (246)
T ss_pred             HHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---c---
Confidence               2 489999999841                    1111    23334454443 3689999996432211   1   


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                       ....|..+|.+.+.+.+.       .++++..+.||.+..+....            ..+.+         -.+..+|+
T Consensus       146 -~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~------------~~~~~---------~~~~pe~~  203 (246)
T PRK05599        146 -ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG------------MKPAP---------MSVYPRDV  203 (246)
T ss_pred             -CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC------------CCCCC---------CCCCHHHH
Confidence             122344577776554432       37888999999876542110            00100         02468999


Q ss_pred             HHHHHHHhcCCCccCCCEEEeeC
Q 018900          275 SSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                      |+.++.++.....  ++.+.+..
T Consensus       204 a~~~~~~~~~~~~--~~~~~~~~  224 (246)
T PRK05599        204 AAAVVSAITSSKR--STTLWIPG  224 (246)
T ss_pred             HHHHHHHHhcCCC--CceEEeCc
Confidence            9999999998653  23455443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.88  E-value=2e-08  Score=95.94  Aligned_cols=169  Identities=12%  Similarity=0.099  Sum_probs=97.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++|+|+||    ||+|+||++++++|.++|++|++++|+.+.........     ......+.++..|.+++.+.+.+  
T Consensus       177 ~gK~VLIT----GASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-----~~~v~~v~~Dvsd~~~v~~~l~~--  245 (406)
T PRK07424        177 KGKTVAVT----GASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-----DLPVKTLHWQVGQEAALAELLEK--  245 (406)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-----CCCeEEEEeeCCCHHHHHHHhCC--
Confidence            56899999    99999999999999999999999999765432111000     00000122333456777777754  


Q ss_pred             ccEEEeCCCC-----------------ChhhHHHHHHHH----HhCCC----cEEEEeccccccCCCCCCCCCCCCCCCC
Q 018900          153 FDVVLDNNGK-----------------NLDAVRPVADWA----KSSGV----KQFLFISSAGIYKPADEPPHVEGDVVKP  207 (349)
Q Consensus       153 ~d~Vi~~a~~-----------------~~~~~~~ll~~a----~~~gv----~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  207 (349)
                      +|++||++|.                 |+.++.++++++    ++.+.    ..+|.+|+.+. .    .+    ....+
T Consensus       246 IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~----~~----~~~~Y  316 (406)
T PRK07424        246 VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-N----PA----FSPLY  316 (406)
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-c----CC----CchHH
Confidence            6999999983                 445555666554    33331    23455554321 1    01    11124


Q ss_pred             CCChHHHHHHHH----hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          208 DAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       208 ~~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      ..+|.+++.+..    +.+..+..+.||    |.... +           .          ....+..+|+|+.++.+++
T Consensus       317 ~ASKaAl~~l~~l~~~~~~~~I~~i~~g----p~~t~-~-----------~----------~~~~~spe~vA~~il~~i~  370 (406)
T PRK07424        317 ELSKRALGDLVTLRRLDAPCVVRKLILG----PFKSN-L-----------N----------PIGVMSADWVAKQILKLAK  370 (406)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEEEeC----CCcCC-C-----------C----------cCCCCCHHHHHHHHHHHHH
Confidence            456766655421    123333333333    22111 0           0          0124688999999999998


Q ss_pred             CCCc
Q 018900          284 NPEA  287 (349)
Q Consensus       284 ~~~~  287 (349)
                      +++.
T Consensus       371 ~~~~  374 (406)
T PRK07424        371 RDFR  374 (406)
T ss_pred             CCCC
Confidence            8654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.87  E-value=8.3e-08  Score=86.56  Aligned_cols=196  Identities=11%  Similarity=0.072  Sum_probs=112.1

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCC--CCcccCCCCCCCcccceecCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~  145 (349)
                      ++++++||    ||  ++.||.+++++|+++|++|++++|+.  +..+++..       ++ ...+..+.+|   +++++
T Consensus         6 ~~k~~lIt----Ga~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~i~   73 (256)
T PRK07889          6 EGKRILVT----GVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK-------RL-PEPAPVLELDVTNEEHLA   73 (256)
T ss_pred             cCCEEEEe----CCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHH-------hc-CCCCcEEeCCCCCHHHHH
Confidence            45789999    99  89999999999999999999998764  11121111       11 1133444555   55555


Q ss_pred             hhhcC-----CCccEEEeCCCCC------------------------hhhH----HHHHHHHHhCCCcEEEEeccccccC
Q 018900          146 NVVGG-----VTFDVVLDNNGKN------------------------LDAV----RPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       146 ~~~~~-----~~~d~Vi~~a~~~------------------------~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ++++.     -++|++||+||..                        +.+.    +.++..+++  -.++|++|+.+..+
T Consensus        74 ~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~~  151 (256)
T PRK07889         74 SLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATVA  151 (256)
T ss_pred             HHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeeccccc
Confidence            55432     2489999999842                        1122    223333332  24788887533211


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCc
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .    +    .+..+..+|.+.+.+.+       ..|+++..+.||.+-.+..... -.....+.+....++        
T Consensus       152 ~----~----~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------  215 (256)
T PRK07889        152 W----P----AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL--------  215 (256)
T ss_pred             C----C----ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc--------
Confidence            0    0    11122456766554433       2489999999998865432110 001111111111111        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      .+.+...+|+|++++.++.+... ..|+++.+.++
T Consensus       216 ~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        216 GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            01246789999999999987543 45577777665

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.87  E-value=1.2e-08  Score=91.91  Aligned_cols=192  Identities=16%  Similarity=0.117  Sum_probs=106.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHh----CCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhh
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLG----SGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~----~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .||||    ||++.||.+++++|.+    +|++|+++.|+.+...++...    +.. .....+.++.+|   .++++++
T Consensus         2 ~vlIt----Gas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~~~~~v~~~   73 (256)
T TIGR01500         2 VCLVT----GASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAE----IGAERSGLRVVRVSLDLGAEAGLEQL   73 (256)
T ss_pred             EEEEe----cCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHH----HHhcCCCceEEEEEeccCCHHHHHHH
Confidence            58999    9999999999999997    799999999987544322110    000 001134445555   5555554


Q ss_pred             hcCC---------CccEEEeCCCCC-----------------------hhh----HHHHHHHHHhC-C-CcEEEEecccc
Q 018900          148 VGGV---------TFDVVLDNNGKN-----------------------LDA----VRPVADWAKSS-G-VKQFLFISSAG  189 (349)
Q Consensus       148 ~~~~---------~~d~Vi~~a~~~-----------------------~~~----~~~ll~~a~~~-g-v~~~i~~Ss~~  189 (349)
                      ++..         ..|+|||+||..                       +.+    ++.++..+++. + -.++|++||..
T Consensus        74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~  153 (256)
T TIGR01500        74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC  153 (256)
T ss_pred             HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence            4321         236899999831                       112    23344444443 2 35899999975


Q ss_pred             ccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-----HHHHHHHHhCCCcc
Q 018900          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVP  257 (349)
Q Consensus       190 vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-----~~~~~~~~~~~~~~  257 (349)
                      .+....       ....+..+|.+++.+.+.       .++.+..+.||++-.+.... ..     ......+....+  
T Consensus       154 ~~~~~~-------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~--  223 (256)
T TIGR01500       154 AIQPFK-------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ-VREESVDPDMRKGLQELKA--  223 (256)
T ss_pred             hCCCCC-------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH-HHHhcCChhHHHHHHHHHh--
Confidence            432211       111233466665554433       37889999999885442110 00     000000100000  


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCE
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  292 (349)
                             ...+...+|+|+.++.++++.+...|+.
T Consensus       224 -------~~~~~~p~eva~~~~~l~~~~~~~~G~~  251 (256)
T TIGR01500       224 -------KGKLVDPKVSAQKLLSLLEKDKFKSGAH  251 (256)
T ss_pred             -------cCCCCCHHHHHHHHHHHHhcCCcCCcce
Confidence                   0125688999999999997543333343

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN00015 protochlorophyllide reductase

Probab=98.86  E-value=2.1e-08  Score=92.99  Aligned_cols=104  Identities=21%  Similarity=0.204  Sum_probs=67.3

Q ss_pred             EEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC---
Q 018900           78 LIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG---  150 (349)
Q Consensus        78 LVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~---  150 (349)
                      |||    ||++.||.+++++|+++| ++|++.+|+.+...+.....    .. ....+.++.+|   .+++++++..   
T Consensus         1 lIT----Gas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l----~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~   71 (308)
T PLN00015          1 IIT----GASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA----GM-PKDSYTVMHLDLASLDSVRQFVDNFRR   71 (308)
T ss_pred             CEe----CCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh----cC-CCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            689    999999999999999999 99999999765433221100    00 01123344444   5555555432   


Q ss_pred             --CCccEEEeCCCC---------------------Chhh----HHHHHHHHHhCC--CcEEEEeccccc
Q 018900          151 --VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGI  190 (349)
Q Consensus       151 --~~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~g--v~~~i~~Ss~~v  190 (349)
                        .++|++||+||.                     |+.+    ++.++..+++.+  ..++|++||...
T Consensus        72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~  140 (308)
T PLN00015         72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG  140 (308)
T ss_pred             cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Confidence              148999999983                     1222    445566666554  469999999654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.85  E-value=7.8e-08  Score=86.07  Aligned_cols=180  Identities=18%  Similarity=0.263  Sum_probs=119.3

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC-CCeEEEcC---hhhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D---~~~l~~  146 (349)
                      ...++.||||    ||++.+|+.++.++.++|..+.+.+.+.+...+..       +++... .+..+.+|   .+++..
T Consensus        35 ~v~g~~vLIT----Ggg~GlGr~ialefa~rg~~~vl~Din~~~~~etv-------~~~~~~g~~~~y~cdis~~eei~~  103 (300)
T KOG1201|consen   35 SVSGEIVLIT----GGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETV-------KEIRKIGEAKAYTCDISDREEIYR  103 (300)
T ss_pred             hccCCEEEEe----CCCchHHHHHHHHHHHhCCeEEEEeccccchHHHH-------HHHHhcCceeEEEecCCCHHHHHH
Confidence            3457899999    99999999999999999999999998876554321       222211 34555666   444443


Q ss_pred             hhc----CCC-ccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCcEEEEeccc-cccCCCCC
Q 018900          147 VVG----GVT-FDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSA-GIYKPADE  196 (349)
Q Consensus       147 ~~~----~~~-~d~Vi~~a~~--------------------~~----~~~~~ll~~a~~~gv~~~i~~Ss~-~vy~~~~~  196 (349)
                      ..+    +.+ +|++|++||+                    |+    .-+++++-.+.+.+-.|+|-++|. |..|...-
T Consensus       104 ~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl  183 (300)
T KOG1201|consen  104 LAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL  183 (300)
T ss_pred             HHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc
Confidence            332    223 8999999993                    22    347788888888888899999985 44443322


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHhh----------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~~----------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                              ..|.++|+++.-+.+..          |++.+.+.|+.+= .+        +++.   ..+.+      ...
T Consensus       184 --------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~-Tg--------mf~~---~~~~~------~l~  237 (300)
T KOG1201|consen  184 --------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN-TG--------MFDG---ATPFP------TLA  237 (300)
T ss_pred             --------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-cc--------ccCC---CCCCc------ccc
Confidence                    22345787765444321          6888999887652 11        1222   11111      235


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      +.+..+.+|+.++.+++....
T Consensus       238 P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  238 PLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             CCCCHHHHHHHHHHHHHcCCc
Confidence            678999999999999988755

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.78  E-value=1.8e-08  Score=89.21  Aligned_cols=145  Identities=9%  Similarity=0.087  Sum_probs=90.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~  149 (349)
                      +++++|||    ||++.||+.++++|.++|++|+++.|+.+..++....    ..+. ...+..+.+   |+++++++++
T Consensus         4 ~~k~~lVt----Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~----i~~~-~~~~~~~~~D~~~~~~~~~~~~   74 (227)
T PRK08862          4 KSSIILIT----SAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQ----CSAL-TDNVYSFQLKDFSQESIRHLFD   74 (227)
T ss_pred             CCeEEEEE----CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHhc-CCCeEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987654332110    0000 112233333   4666655543


Q ss_pred             ----C-C-CccEEEeCCCCC---------------------hhh----HHHHHHHHHhCC-CcEEEEeccccccCCCCCC
Q 018900          150 ----G-V-TFDVVLDNNGKN---------------------LDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       150 ----~-~-~~d~Vi~~a~~~---------------------~~~----~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~  197 (349)
                          . . ++|++||++|..                     +.+    .+.++..+++.+ -.++|++||...+.     
T Consensus        75 ~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----  149 (227)
T PRK08862         75 AIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-----  149 (227)
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-----
Confidence                2 1 489999999720                     111    223344454433 45899999854221     


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGS  236 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~  236 (349)
                           ....+..+|.+.+.+.+       ..++++..+.||.+-.+
T Consensus       150 -----~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        150 -----DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             -----CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                 11224456766555443       24899999999987665

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.76  E-value=3.5e-08  Score=88.13  Aligned_cols=184  Identities=10%  Similarity=0.020  Sum_probs=108.8

Q ss_pred             HHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC--CccEEEeCCCC---------
Q 018900           94 LAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--TFDVVLDNNGK---------  162 (349)
Q Consensus        94 l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~--~~d~Vi~~a~~---------  162 (349)
                      ++++|+++|++|++++|+.+...            + ..-++.+..|.+++.++++..  ++|+|||+||.         
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~-~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~   67 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------L-DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV   67 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------h-hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence            47899999999999999865321            0 012334445677777777653  58999999983         


Q ss_pred             ---ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCC----------------CC----CCCCCChHHHHHH
Q 018900          163 ---NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG----------------DV----VKPDAGHVQVEKY  217 (349)
Q Consensus       163 ---~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~----------------~~----~~~~~~k~~~ek~  217 (349)
                         |+.++..+++++...  +..+||++||...|+.....+..+.                .+    ..|..+|.+.+.+
T Consensus        68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~  147 (241)
T PRK12428         68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILW  147 (241)
T ss_pred             hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHH
Confidence               667777788776543  2369999999888763221111110                01    1122345554332


Q ss_pred             H--------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-c
Q 018900          218 I--------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  288 (349)
Q Consensus       218 ~--------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~  288 (349)
                      .        ...|+++..++||.+.++..... ....-.......  ..+     ...+...+|+|++++.++..+.. .
T Consensus       148 ~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~--~~~-----~~~~~~pe~va~~~~~l~s~~~~~~  219 (241)
T PRK12428        148 TMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSMLGQERVDSD--AKR-----MGRPATADEQAAVLVFLCSDAARWI  219 (241)
T ss_pred             HHHHHHHhhhccCeEEEEeecCCccCcccccc-hhhhhhHhhhhc--ccc-----cCCCCCHHHHHHHHHHHcChhhcCc
Confidence            2        22479999999999988753221 000000000000  000     11245789999999998865433 3


Q ss_pred             CCCEEEeeCC
Q 018900          289 SSNIFNLVSD  298 (349)
Q Consensus       289 ~~~~~~i~~~  298 (349)
                      +|+.+.+.++
T Consensus       220 ~G~~i~vdgg  229 (241)
T PRK12428        220 NGVNLPVDGG  229 (241)
T ss_pred             cCcEEEecCc
Confidence            4577777665

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.70  E-value=7.5e-07  Score=82.23  Aligned_cols=206  Identities=10%  Similarity=0.065  Sum_probs=112.7

Q ss_pred             ccceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC----CCcccceecC----CCeEEEcC-
Q 018900           72 AEKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP----FNRFNEIVSA----GGKTVWGD-  140 (349)
Q Consensus        72 ~~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~----~~~~~~l~~~----~~~~~~~D-  140 (349)
                      -++|.+|||    ||  +..||+++++.|.++|.+|++ .|..+.++.+....    ......+...    ....+.+| 
T Consensus         7 l~gk~alIT----Ga~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          7 LRGKRAFIA----GVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCCCEEEEe----CCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            457899999    99  799999999999999999988 66543332211000    0000000000    01122222 


Q ss_pred             ----------------------hhhHHhhhcC----C-CccEEEeCCCC----------------------Chhh----H
Q 018900          141 ----------------------PAEVGNVVGG----V-TFDVVLDNNGK----------------------NLDA----V  167 (349)
Q Consensus       141 ----------------------~~~l~~~~~~----~-~~d~Vi~~a~~----------------------~~~~----~  167 (349)
                                            .+++++++..    . ++|++||+||.                      |+.+    +
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence                                  1244554432    2 38999999952                      2223    3


Q ss_pred             HHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH----h----hCCcEEEEecCceeeCCCC
Q 018900          168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E----NFSNWASFRPQYMIGSGNN  239 (349)
Q Consensus       168 ~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~----~~~~~~ilR~~~v~g~~~~  239 (349)
                      +.++..+++.  .++|++||.......   |   .....|..+|.+++.+.+    |    .++++..|-||.+-.+...
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~~~~---p---~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~  233 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASERII---P---GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAK  233 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhcCCC---C---CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhh
Confidence            4444455543  589999986532211   1   111123456766555432    2    3688999999988655322


Q ss_pred             CC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          240 KD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .. .............++         ..+...+|++.+++.++..... ..|+++.+.++.
T Consensus       234 ~~~~~~~~~~~~~~~~pl---------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        234 AIGFIDDMIEYSYANAPL---------QKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             cccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            10 001111111111111         1235789999999999976543 355777776653

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.68  E-value=4.9e-07  Score=77.63  Aligned_cols=200  Identities=16%  Similarity=0.194  Sum_probs=120.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .+|+++||    ||.|.||+.+.++|+++|..+.++..+.++.+...     +++.+ ....+-++.+|   ..++++++
T Consensus         4 tGKna~vt----ggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-----kL~ai~p~~~v~F~~~DVt~~~~~~~~f   74 (261)
T KOG4169|consen    4 TGKNALVT----GGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-----KLQAINPSVSVIFIKCDVTNRGDLEAAF   74 (261)
T ss_pred             cCceEEEe----cCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-----HHhccCCCceEEEEEeccccHHHHHHHH
Confidence            47899999    99999999999999999998888877666544322     11111 12244556666   44444444


Q ss_pred             ----cCCC-ccEEEeCCCC------------C----hhhHHHHHHHHHhC-C--CcEEEEeccccccCCCCCCCCCCCCC
Q 018900          149 ----GGVT-FDVVLDNNGK------------N----LDAVRPVADWAKSS-G--VKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       149 ----~~~~-~d~Vi~~a~~------------~----~~~~~~ll~~a~~~-g--v~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                          ...+ +|++|+.||+            |    +.++...+.++.+. |  -.-+|.+||  |+|-.. .|..+   
T Consensus        75 ~ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsS--v~GL~P-~p~~p---  148 (261)
T KOG4169|consen   75 DKILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSS--VAGLDP-MPVFP---  148 (261)
T ss_pred             HHHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecc--ccccCc-cccch---
Confidence                3334 8999999994            2    34566677777543 2  246899999  444321 12111   


Q ss_pred             CCCCCChHH---------HHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCC----CCcceeeeeH
Q 018900          205 VKPDAGHVQ---------VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS----GMQFTNIAHV  271 (349)
Q Consensus       205 ~~~~~~k~~---------~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~v  271 (349)
                       -|.++|.+         -+.+.+..|+++..++||..--         .+++.+...+...-+.+    --....--+.
T Consensus       149 -VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t---------~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~  218 (261)
T KOG4169|consen  149 -VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT---------DLAENIDASGGYLEYSDSIKEALERAPKQSP  218 (261)
T ss_pred             -hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchH---------HHHHHHHhcCCcccccHHHHHHHHHcccCCH
Confidence             12234433         3567777899999999986411         11222221111100000    0001112356


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      .+++..++.++|.+..  |.+|-+..+.
T Consensus       219 ~~~a~~~v~aiE~~~N--Gaiw~v~~g~  244 (261)
T KOG4169|consen  219 ACCAINIVNAIEYPKN--GAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHHHHHhhccC--CcEEEEecCc
Confidence            7999999999999654  6788888764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.66  E-value=2.4e-07  Score=83.28  Aligned_cols=181  Identities=18%  Similarity=0.237  Sum_probs=115.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~~~  151 (349)
                      .+|+||    ||+..+|..++..+..+|++|+++.|+.++..+........ ..+.  .+.+..+   |.+.+...+++.
T Consensus        34 ~hi~it----ggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~-~~~~--~v~~~S~d~~~Y~~v~~~~~~l  106 (331)
T KOG1210|consen   34 RHILIT----GGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELL-TQVE--DVSYKSVDVIDYDSVSKVIEEL  106 (331)
T ss_pred             ceEEEe----cCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhh-hccc--eeeEeccccccHHHHHHHHhhh
Confidence            689999    99999999999999999999999999986665543221100 0111  1333333   466777776665


Q ss_pred             -----CccEEEeCCC--------------------CChhhHHHHHHHH----HhCC-CcEEEEeccc----cccCCCCCC
Q 018900          152 -----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSG-VKQFLFISSA----GIYKPADEP  197 (349)
Q Consensus       152 -----~~d~Vi~~a~--------------------~~~~~~~~ll~~a----~~~g-v~~~i~~Ss~----~vy~~~~~~  197 (349)
                           .+|.+++|||                    +|+.++.|++.++    ++.. ..+|+++||.    ++||.... 
T Consensus       107 ~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY-  185 (331)
T KOG1210|consen  107 RDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY-  185 (331)
T ss_pred             hhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc-
Confidence                 4899999999                    3566777766644    3332 3488888873    34443322 


Q ss_pred             CCCCCCCCCCCCChHHHHH-------HHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc---ccCCCCCccee
Q 018900          198 PHVEGDVVKPDAGHVQVEK-------YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV---PIPGSGMQFTN  267 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek-------~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  267 (349)
                                ..+|++..-       .+.++++.++..-|+.+--|+-...         ...+|.   .+-|.    .+
T Consensus       186 ----------s~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---------n~tkP~~t~ii~g~----ss  242 (331)
T KOG1210|consen  186 ----------SPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE---------NKTKPEETKIIEGG----SS  242 (331)
T ss_pred             ----------ccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc---------cccCchheeeecCC----CC
Confidence                      225655333       2333488888888888877763321         111221   12221    23


Q ss_pred             eeeHHHHHHHHHHHhcCCC
Q 018900          268 IAHVRDLSSMLTLAVENPE  286 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~  286 (349)
                      .+..+|+|.+++.-+...+
T Consensus       243 ~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  243 VIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             CcCHHHHHHHHHhHHhhcC
Confidence            4788999999998887754

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.66  E-value=9.9e-07  Score=80.02  Aligned_cols=210  Identities=15%  Similarity=0.123  Sum_probs=122.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhH----H
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV----G  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l----~  145 (349)
                      .+|.+|||    ||+..||+.++++|.+.|.+|++.+|+.+...........  .......+..+.+|   .++.    .
T Consensus         7 ~gkvalVT----G~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~l~~   80 (270)
T KOG0725|consen    7 AGKVALVT----GGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKEVDVEKLVE   80 (270)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999988654332111000  00112234556666   2332    2


Q ss_pred             hhhcC--CCccEEEeCCCC---------------------Chhh-HHHHHH----HHHhCCCcEEEEeccccccCCCCCC
Q 018900          146 NVVGG--VTFDVVLDNNGK---------------------NLDA-VRPVAD----WAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       146 ~~~~~--~~~d~Vi~~a~~---------------------~~~~-~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ...+.  -++|++|+++|.                     |+.+ ...+..    .+++.+-..++++||..-+......
T Consensus        81 ~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~  160 (270)
T KOG0725|consen   81 FAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS  160 (270)
T ss_pred             HHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC
Confidence            33333  248999999993                     3332 233333    3344455689999986543322111


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC--CCcccCCCCCcceee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK--RPVPIPGSGMQFTNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  268 (349)
                            ...|..+|.+++.+.+.       +|+++..+-||.+..+.....+.........+.  .+..++     .-.+
T Consensus       161 ------~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-----~gr~  229 (270)
T KOG0725|consen  161 ------GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-----LGRV  229 (270)
T ss_pred             ------cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-----cCCc
Confidence                  02344578777766543       389999999999888752111111111111111  111111     1224


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|++..+..++..... ..|+.+.+.++.
T Consensus       230 g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             cCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            5678999999888877533 345677776664

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.62  E-value=1.7e-07  Score=86.78  Aligned_cols=196  Identities=14%  Similarity=0.131  Sum_probs=107.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCC--CCCCCc-ccceec--CCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK--KPPFNR-FNEIVS--AGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~--~~~~~~-~~~l~~--~~~~~~~~D---~~~l  144 (349)
                      ++|.+|||    ||++.||.+++++|+++|++|++++|+.....+..  ...... ..++..  ..+..+.+|   ++++
T Consensus         7 ~~k~~lIT----Ggs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          7 RGKVALVA----GATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            46899999    99999999999999999999999999753211000  000000 011111  123345555   5555


Q ss_pred             HhhhcCC-----CccEEEeCC-CC------------------------Chhh----HHHHHHHHHhCCCcEEEEeccccc
Q 018900          145 GNVVGGV-----TFDVVLDNN-GK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGI  190 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a-~~------------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~v  190 (349)
                      +.+++..     ++|++||++ +.                        |+.+    ++.++..+++.+-.++|++||...
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            5554332     489999999 52                        1111    233444454444468999998432


Q ss_pred             -cCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHh--CCCc-ccC
Q 018900          191 -YKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPV-PIP  259 (349)
Q Consensus       191 -y~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~-~~~  259 (349)
                       ++...   .  .....|..+|.++..+.+       ..|+++..|.||.+-.+.         ......  .... ...
T Consensus       163 ~~~~~~---~--~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~---------~~~~~~~~~~~~~~~~  228 (305)
T PRK08303        163 EYNATH---Y--RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM---------MLDAFGVTEENWRDAL  228 (305)
T ss_pred             cccCcC---C--CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH---------HHHhhccCccchhhhh
Confidence             22111   0  011224456766555443       237899999999875432         111000  0000 000


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCCC
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENPE  286 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~~  286 (349)
                      ...-...-+...+|+|++++.++.++.
T Consensus       229 ~~~p~~~~~~~peevA~~v~fL~s~~~  255 (305)
T PRK08303        229 AKEPHFAISETPRYVGRAVAALAADPD  255 (305)
T ss_pred             ccccccccCCCHHHHHHHHHHHHcCcc
Confidence            000000113368999999999998763

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.56  E-value=5.3e-07  Score=83.26  Aligned_cols=161  Identities=18%  Similarity=0.107  Sum_probs=98.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhh---
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV---  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~---  147 (349)
                      ....+.++||    |||..||.+++++|..+|.+|+...|+.+...+.......   +.....+.+..+|..++..+   
T Consensus        32 ~~~~~~~vVT----GansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl~SV~~f  104 (314)
T KOG1208|consen   32 DLSGKVALVT----GATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSLKSVRKF  104 (314)
T ss_pred             cCCCcEEEEE----CCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCHHHHHHH
Confidence            3345899999    9999999999999999999999999997544332211110   22234556677774333322   


Q ss_pred             h---c--CCCccEEEeCCCC------------------Chh----hHHHHHHHHHhCCCcEEEEeccccc-cCCCCCCCC
Q 018900          148 V---G--GVTFDVVLDNNGK------------------NLD----AVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPH  199 (349)
Q Consensus       148 ~---~--~~~~d~Vi~~a~~------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~~~~  199 (349)
                      .   .  ..+.|++|++||+                  |..    -+..++..++.....|+|++||..- .........
T Consensus       105 a~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~  184 (314)
T KOG1208|consen  105 AEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLS  184 (314)
T ss_pred             HHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhcc
Confidence            2   1  2248999999994                  332    3667777788766579999999543 111111111


Q ss_pred             CCCC--CC---CCCCChHHH----HHHHHhh--CCcEEEEecCceeeCCC
Q 018900          200 VEGD--VV---KPDAGHVQV----EKYISEN--FSNWASFRPQYMIGSGN  238 (349)
Q Consensus       200 ~e~~--~~---~~~~~k~~~----ek~~~~~--~~~~~ilR~~~v~g~~~  238 (349)
                      .|..  ..   .+..+|.+.    .++.++.  |+....+.||.+..+..
T Consensus       185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             chhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccce
Confidence            1111  00   122334332    2222222  78999999999887743

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.54  E-value=1.4e-07  Score=80.59  Aligned_cols=136  Identities=18%  Similarity=0.202  Sum_probs=86.5

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCC-CCcccCCCCCCCcccceecCC--CeEEEcC---hhhHHhhh
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD-ENSDKMKKPPFNRFNEIVSAG--GKTVWGD---PAEVGNVV  148 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~--~~~~~~D---~~~l~~~~  148 (349)
                      .+|||    ||+|.+|..+++.|.++|. +|+++.|.. .....     ...+.++...+  +.+..+|   ++++.+++
T Consensus         2 tylit----GG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~-----~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~   72 (181)
T PF08659_consen    2 TYLIT----GGLGGLGQSLARWLAERGARRLILLGRSGAPSAEA-----EAAIRELESAGARVEYVQCDVTDPEAVAAAL   72 (181)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTH-----HHHHHHHHHTT-EEEEEE--TTSHHHHHHHH
T ss_pred             EEEEE----CCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHH-----HHHHHHHHhCCCceeeeccCccCHHHHHHHH
Confidence            48999    9999999999999999975 799999983 11110     01222333333  4444555   77777777


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEG  202 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~e~  202 (349)
                      ...     +++.|||+++.                    .+.+..++.++......+.||++||+. ++|....      
T Consensus        73 ~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq------  146 (181)
T PF08659_consen   73 AQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ------  146 (181)
T ss_dssp             HTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB------
T ss_pred             HHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch------
Confidence            654     48999999993                    256788999999888899999999964 6665542      


Q ss_pred             CCCCCCCChHHHHHHH--------HhhCCcEEEEecCce
Q 018900          203 DVVKPDAGHVQVEKYI--------SENFSNWASFRPQYM  233 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~--------~~~~~~~~ilR~~~v  233 (349)
                             .-|.+....        +..+.+++.+.-+.+
T Consensus       147 -------~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 -------SAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             -------HhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence                   344433222        233788888875543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.51  E-value=3.8e-06  Score=75.77  Aligned_cols=143  Identities=19%  Similarity=0.178  Sum_probs=96.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe---EEEcChhhHHhh-
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEVGNV-  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~D~~~l~~~-  147 (349)
                      ...|-||||    |+....|+.++++|.++|+.|.+-.-.++..+.+...-       ..+...   .+..++++++++ 
T Consensus        27 ~~~k~VlIT----GCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~-------~s~rl~t~~LDVT~~esi~~a~   95 (322)
T KOG1610|consen   27 LSDKAVLIT----GCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET-------KSPRLRTLQLDVTKPESVKEAA   95 (322)
T ss_pred             cCCcEEEEe----cCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh-------cCCcceeEeeccCCHHHHHHHH
Confidence            346779999    99999999999999999999999997766655443222       022333   334445555444 


Q ss_pred             ------hcCCCccEEEeCCCC---------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCC
Q 018900          148 ------VGGVTFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ------~~~~~~d~Vi~~a~~---------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                            +++.+.=.|||+||+                     |+-    -+++++-..|+++ .|+|++||++-  ... 
T Consensus        96 ~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G--R~~-  171 (322)
T KOG1610|consen   96 QWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG--RVA-  171 (322)
T ss_pred             HHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc--Ccc-
Confidence                  445557889999993                     333    3666666777766 49999999652  111 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCce
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYM  233 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v  233 (349)
                      .|    .-..+..+|+++|.+...       +|+++.++-||.+
T Consensus       172 ~p----~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  172 LP----ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             Cc----ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            11    111233589998886543       4999999999943

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.48  E-value=1.3e-07  Score=84.38  Aligned_cols=189  Identities=14%  Similarity=0.235  Sum_probs=112.4

Q ss_pred             Ccc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhhcC------CC
Q 018900           85 GGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVVGG------VT  152 (349)
Q Consensus        85 Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~~~------~~  152 (349)
                      |++  +.||+.++++|+++|++|++++|+.+...+       ...++. ..+.+++.+|   +++++.+++.      -+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~-------~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~   73 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLAD-------ALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGR   73 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHH-------HHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSS
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHH-------HHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCC
Confidence            455  999999999999999999999998864211       011111 1134456666   5555555432      24


Q ss_pred             ccEEEeCCCCC------------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          153 FDVVLDNNGKN------------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       153 ~d~Vi~~a~~~------------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      +|++||+++..                        +.+    ++.++..+++.  .++|++||........      .. 
T Consensus        74 iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~------~~-  144 (241)
T PF13561_consen   74 IDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMP------GY-  144 (241)
T ss_dssp             ESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBST------TT-
T ss_pred             eEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCc------cc-
Confidence            89999987731                        122    33333334443  5799999875433211      11 


Q ss_pred             CCCCCChHHHHHH-------HHh-hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          205 VKPDAGHVQVEKY-------ISE-NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       205 ~~~~~~k~~~ek~-------~~~-~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ..+..+|.+++.+       +.. +|+++..|.||.+..+..... ....+.+......|+.         .+...+|+|
T Consensus       145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------r~~~~~evA  215 (241)
T PF13561_consen  145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG---------RLGTPEEVA  215 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS---------SHBEHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC---------CCcCHHHHH
Confidence            1222345444333       233 689999999998875431100 1122333343343331         235789999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ++++.++.+... .+|+++.+.+|
T Consensus       216 ~~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  216 NAVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHHhCccccCccCCeEEECCC
Confidence            999999987633 46688888876

...

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.44  E-value=4.9e-07  Score=76.77  Aligned_cols=155  Identities=11%  Similarity=0.171  Sum_probs=98.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~~~  151 (349)
                      |+++||    ||+|++|. +++.|.++|++|++++|+++....+....    .  ....+..+.+   |.+++..++++.
T Consensus         1 m~vlVt----GGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l----~--~~~~i~~~~~Dv~d~~sv~~~i~~~   69 (177)
T PRK08309          1 MHALVI----GGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRES----T--TPESITPLPLDYHDDDALKLAIKST   69 (177)
T ss_pred             CEEEEE----CcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHh----h--cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            579999    99998876 99999999999999999865443221100    0  0113344444   466666655432


Q ss_pred             -----CccEEEeCCCCChhhHHHHHHHHHhCCCc----EEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhC
Q 018900          152 -----TFDVVLDNNGKNLDAVRPVADWAKSSGVK----QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF  222 (349)
Q Consensus       152 -----~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~----~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~  222 (349)
                           .+|.+|+..-  ..+..++..+|++.|++    +|+++=....-.+                 +...++... ..
T Consensus        70 l~~~g~id~lv~~vh--~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------~~~~~~~~~-~~  129 (177)
T PRK08309         70 IEKNGPFDLAVAWIH--SSAKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------RIPSEKIGP-AR  129 (177)
T ss_pred             HHHcCCCeEEEEecc--ccchhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------hhhhhhhhh-cC
Confidence                 3677775443  56899999999999998    8887653222100                 112223222 45


Q ss_pred             CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 018900          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      ..|.=+.+|++.-..                           .--|+.=+.+++.++++++.+..
T Consensus       130 ~~~~~i~lgf~~~~~---------------------------~~rwlt~~ei~~gv~~~~~~~~~  167 (177)
T PRK08309        130 CSYRRVILGFVLEDT---------------------------YSRWLTHEEISDGVIKAIESDAD  167 (177)
T ss_pred             CceEEEEEeEEEeCC---------------------------ccccCchHHHHHHHHHHHhcCCC
Confidence            577777777654321                           12356667888888888877654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.43  E-value=2.4e-06  Score=72.35  Aligned_cols=144  Identities=20%  Similarity=0.190  Sum_probs=92.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hh----hHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA----EVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~----~l~  145 (349)
                      .+.+||||    ||+..||..+++++++.|.+|++..|+.+.+.+.+...         +++....+|   .+    -++
T Consensus         4 tgnTiLIT----GG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---------p~~~t~v~Dv~d~~~~~~lve   70 (245)
T COG3967           4 TGNTILIT----GGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---------PEIHTEVCDVADRDSRRELVE   70 (245)
T ss_pred             cCcEEEEe----CCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---------cchheeeecccchhhHHHHHH
Confidence            35689999    99999999999999999999999999987665443221         233334444   33    334


Q ss_pred             hhhcCCC-ccEEEeCCCC----------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          146 NVVGGVT-FDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       146 ~~~~~~~-~d~Vi~~a~~----------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      .+.+++. .+++|++||.                      |+.+    +..++....+..-..+|.+||.-.+-+.    
T Consensus        71 wLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm----  146 (245)
T COG3967          71 WLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM----  146 (245)
T ss_pred             HHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc----
Confidence            4444554 7999999993                      2223    4445555666655689999985433222    


Q ss_pred             CCCCCCCCCCCChHHHH---H----HHHhhCCcEEEEecCceeeC
Q 018900          199 HVEGDVVKPDAGHVQVE---K----YISENFSNWASFRPQYMIGS  236 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~e---k----~~~~~~~~~~ilR~~~v~g~  236 (349)
                         ...+.|..+|.+.-   .    .+++.++++.=+-|+.|--+
T Consensus       147 ---~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         147 ---ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ---cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence               22233344565532   2    23344788888888887654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.41  E-value=1.9e-06  Score=77.27  Aligned_cols=95  Identities=20%  Similarity=0.270  Sum_probs=73.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc--ChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--DPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D~~~l~~~~~~~~  152 (349)
                      |+|||+    ||||+ |+.+++.|.++||+|++.+|+......+....          ...+..+  |.+++.+.+.+.+
T Consensus         1 m~ILvl----GGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g----------~~~v~~g~l~~~~l~~~l~~~~   65 (256)
T TIGR00715         1 MTVLLM----GGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ----------ALTVHTGALDPQELREFLKRHS   65 (256)
T ss_pred             CeEEEE----echHH-HHHHHHHHHhCCCeEEEEEccCCccccccccC----------CceEEECCCCHHHHHHHHHhcC
Confidence            589999    99999 99999999999999999999886543322110          1223322  5777888998888


Q ss_pred             ccEEEeCCCCC-hhhHHHHHHHHHhCCCcEEEE
Q 018900          153 FDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       153 ~d~Vi~~a~~~-~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      +|+||+.+-.. .....|+.++|++.|+..+=|
T Consensus        66 i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        66 IDILVDATHPFAAQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             CCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEE
Confidence            99999988854 467889999999999865544

This enzyme was found to be a monomer by gel filtration.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.41  E-value=5.8e-07  Score=84.55  Aligned_cols=95  Identities=20%  Similarity=0.282  Sum_probs=74.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeE---EEcChhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT---VWGDPAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~D~~~l~~~~~  149 (349)
                      ||+|||+    |+ |++|+.++..|.++| ++|++.+|+.++.+++....        ..+++.   +..|.+.+.++++
T Consensus         1 m~~ilvi----Ga-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--------~~~v~~~~vD~~d~~al~~li~   67 (389)
T COG1748           1 MMKILVI----GA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--------GGKVEALQVDAADVDALVALIK   67 (389)
T ss_pred             CCcEEEE----CC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--------cccceeEEecccChHHHHHHHh
Confidence            6899999    77 999999999999998 89999999987776543221        113444   4445788999998


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +.  |+||+++...+..  +++++|.+.|+ +++=+|
T Consensus        68 ~~--d~VIn~~p~~~~~--~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          68 DF--DLVINAAPPFVDL--TILKACIKTGV-DYVDTS   99 (389)
T ss_pred             cC--CEEEEeCCchhhH--HHHHHHHHhCC-CEEEcc
Confidence            87  9999999976655  88899999887 455333

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.39  E-value=1.2e-07  Score=79.25  Aligned_cols=106  Identities=26%  Similarity=0.318  Sum_probs=70.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcC--CCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVG--DENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~--~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      |.||||    ||+|-||+.++++|+++| +.|+++.|+  .+...++       ..++.  ..++.++.+|   .++++.
T Consensus         1 k~~lIt----Ga~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l-------~~~l~~~~~~~~~~~~D~~~~~~~~~   69 (167)
T PF00106_consen    1 KTVLIT----GASSGIGRALARALARRGARVVILTSRSEDSEGAQEL-------IQELKAPGAKITFIECDLSDPESIRA   69 (167)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHH-------HHHHHHTTSEEEEEESETTSHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCceEEEEeeecccccccccc-------cccccccccccccccccccccccccc
Confidence            679999    999999999999999995 578888888  2222211       01111  1344566665   455555


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEecccccc
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy  191 (349)
                      +++..     .+|++||++|.                    |+.+...+.+++...+-.++|++||....
T Consensus        70 ~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~  139 (167)
T PF00106_consen   70 LIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV  139 (167)
T ss_dssp             HHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT
T ss_pred             cccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc
Confidence            44322     48999999993                    34455566666655556799999996643

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.37  E-value=3e-06  Score=72.10  Aligned_cols=142  Identities=21%  Similarity=0.134  Sum_probs=86.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV-  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~-  148 (349)
                      ..++||||   +++.|.||.++++++.+.|+.|++..|..+.-..+..          +.+++....|   ++++.... 
T Consensus         6 ~~k~VlIt---gcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~----------~~gl~~~kLDV~~~~~V~~v~~   72 (289)
T KOG1209|consen    6 QPKKVLIT---GCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI----------QFGLKPYKLDVSKPEEVVTVSG   72 (289)
T ss_pred             CCCeEEEe---ecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH----------hhCCeeEEeccCChHHHHHHHH
Confidence            46789999   2356999999999999999999999998865543321          2344444444   44444332 


Q ss_pred             -----cCCCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 -----GGVTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 -----~~~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                           ..-+.|+++++||.                    |+-|..++.++.    .+++ ..+|++.|...|-+-   |+
T Consensus        73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpf---pf  148 (289)
T KOG1209|consen   73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPF---PF  148 (289)
T ss_pred             HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEecc---ch
Confidence                 22358999999992                    444444444433    3332 479999997765432   22


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIG  235 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g  235 (349)
                      .    ..+.++|.+.-.|..-       +|++++-+-+|+|--
T Consensus       149 ~----~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  149 G----SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             h----hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            1    0112234443333221       277777777777644

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.34  E-value=1.7e-05  Score=73.15  Aligned_cols=36  Identities=25%  Similarity=0.213  Sum_probs=31.7

Q ss_pred             ccceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcC
Q 018900           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVG  111 (349)
Q Consensus        72 ~~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~  111 (349)
                      .++|.+|||    |++  ..||++++++|.++|++|++.+|.
T Consensus         6 ~~gk~alIT----Ga~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          6 LTGKIAFIA----GIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCCCEEEEe----CCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            357899999    995  899999999999999999997653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.31  E-value=3.2e-06  Score=75.61  Aligned_cols=144  Identities=18%  Similarity=0.188  Sum_probs=83.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc--ccCCCCCCCcccceec-CCCeEEEcC----hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVS-AGGKTVWGD----PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~D----~~~l  144 (349)
                      .++++||||    ||++.||..+++.|.++|+.|+++.|..+..  +......     .... ..+.....|    .+++
T Consensus         3 ~~~~~ilIT----Gas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dvs~~~~~v   73 (251)
T COG1028           3 LSGKVALVT----GASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAI-----KEAGGGRAAAVAADVSDDEESV   73 (251)
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHH-----HhcCCCcEEEEEecCCCCHHHH
Confidence            357899999    9999999999999999999999888876431  1110000     0000 123333334    3333


Q ss_pred             Hhhh----cCCC-ccEEEeCCCC---------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCC
Q 018900          145 GNVV----GGVT-FDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       145 ~~~~----~~~~-~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      ..++    ...+ +|++|++||.                     |+.+...+.+    .+++   +++|++||.... ..
T Consensus        74 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~~Iv~isS~~~~-~~  149 (251)
T COG1028          74 EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---QRIVNISSVAGL-GG  149 (251)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---CeEEEECCchhc-CC
Confidence            3333    2222 7999999994                     2223333333    2231   199999997644 22


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCcee
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMI  234 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~  234 (349)
                      ...      ...|..+|.+++.+.+       +.|+.+..+.||.+-
T Consensus       150 ~~~------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         150 PPG------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             CCC------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            211      2333456766544332       347899999999544

>PRK09620 hypothetical protein; Provisional

Probab=98.28  E-value=2.5e-06  Score=75.32  Aligned_cols=77  Identities=22%  Similarity=0.241  Sum_probs=52.5

Q ss_pred             cceEEEEEecCCCcc----------------cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE
Q 018900           73 EKKKVLIVNTNSGGH----------------AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt----------------G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~  136 (349)
                      .+++||||    +|.                ||+|++|+++|+++|++|+++++.......  .     ..  ....+..
T Consensus         2 ~gk~vlIT----aG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~--~-----~~--~~~~~~~   68 (229)
T PRK09620          2 KGKKVLIT----SGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN--D-----IN--NQLELHP   68 (229)
T ss_pred             CCCEEEEe----CCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc--c-----cC--CceeEEE
Confidence            46899999    775                999999999999999999999864321110  0     00  0011223


Q ss_pred             EEcC---hhhHHhhhcCCCccEEEeCCCC
Q 018900          137 VWGD---PAEVGNVVGGVTFDVVLDNNGK  162 (349)
Q Consensus       137 ~~~D---~~~l~~~~~~~~~d~Vi~~a~~  162 (349)
                      +.++   .+.+.+++...++|+|||+|+.
T Consensus        69 V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         69 FEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             EecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            4443   3556667765568999999995

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.26  E-value=7.5e-06  Score=75.88  Aligned_cols=153  Identities=19%  Similarity=0.176  Sum_probs=95.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEE-EcChhhHH
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTV-WGDPAEVG  145 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~-~~D~~~l~  145 (349)
                      .-+|+||+|+    |+.|.+|+.++..|..++  ++++.+++.......         .++.+.  ...+. ..|..++.
T Consensus         5 ~~~~~KI~Ii----GaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a---------~Dl~~~~~~~~v~~~td~~~~~   71 (321)
T PTZ00325          5 ALKMFKVAVL----GAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA---------ADLSHIDTPAKVTGYADGELWE   71 (321)
T ss_pred             CCCCCEEEEE----CCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc---------cchhhcCcCceEEEecCCCchH
Confidence            3467899999    999999999999998655  689999983211110         111111  22222 33556656


Q ss_pred             hhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCC--CCCCCCCCCCC-
Q 018900          146 NVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPD-  208 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~--~~~e~~~~~~~-  208 (349)
                      +.++++  |+||+++|.              |+..++++++++++.+.+++|+++|-.+..-..-.  .+.+.....+. 
T Consensus        72 ~~l~ga--DvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~  149 (321)
T PTZ00325         72 KALRGA--DLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRK  149 (321)
T ss_pred             HHhCCC--CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhh
Confidence            778776  999999994              45678999999999999999999996543221000  00011111110 


Q ss_pred             ---CChHH---HHHHHH-hhCCcEEEEecCceeeCCCC
Q 018900          209 ---AGHVQ---VEKYIS-ENFSNWASFRPQYMIGSGNN  239 (349)
Q Consensus       209 ---~~k~~---~ek~~~-~~~~~~~ilR~~~v~g~~~~  239 (349)
                         .+-..   ...++. ..+++..-++ ++|+|.+.+
T Consensus       150 viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        150 LFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             eeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence               01111   222333 3477777777 888998776

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.25  E-value=1.8e-06  Score=71.04  Aligned_cols=198  Identities=16%  Similarity=0.144  Sum_probs=116.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG---  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~---  149 (349)
                      .++.||||    |+.-.||+.++++|.+.|.+|+++.|++.....+-...        ..-++.+.+|...++.+++   
T Consensus         6 aG~~vlvT----gagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------p~~I~Pi~~Dls~wea~~~~l~   73 (245)
T KOG1207|consen    6 AGVIVLVT----GAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------PSLIIPIVGDLSAWEALFKLLV   73 (245)
T ss_pred             cceEEEee----cccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------CcceeeeEecccHHHHHHHhhc
Confidence            47899999    99999999999999999999999999987665432211        1126677778655555544   


Q ss_pred             CCC-ccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CcEEEEeccccccCCCCCCCCCCCC
Q 018900          150 GVT-FDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       150 ~~~-~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      ... +|.++++||+                    |+.+..++.+.    ....+ ...+|.+||.+..     .+++...
T Consensus        74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-----R~~~nHt  148 (245)
T KOG1207|consen   74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-----RPLDNHT  148 (245)
T ss_pred             ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-----cccCCce
Confidence            333 7999999983                    34443333333    22222 2458999986532     2222111


Q ss_pred             CCCCCCChHHHHHH----HHhh---CCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          204 VVKPDAGHVQVEKY----ISEN---FSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       204 ~~~~~~~k~~~ek~----~~~~---~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                        -|..+|.+..-+    ..|.   .+++..+.|..+.-.....++- +.--..++...|+         --|..++.++
T Consensus       149 --vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl---------~rFaEV~eVV  217 (245)
T KOG1207|consen  149 --VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL---------KRFAEVDEVV  217 (245)
T ss_pred             --EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch---------hhhhHHHHHH
Confidence              122345443222    2233   4677788888776543222100 0001112222221         2366789999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +++..++.+... .+|....+.+|
T Consensus       218 nA~lfLLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  218 NAVLFLLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             hhheeeeecCcCcccCceeeecCC
Confidence            999988887654 34566666655

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.21  E-value=5e-05  Score=65.45  Aligned_cols=185  Identities=21%  Similarity=0.225  Sum_probs=104.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEE-cCCCCcccCCCCCCCcccceecCCCeEEEcC----------h
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----------P  141 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----------~  141 (349)
                      ++.|+||    ||+..||..|+++|++. |.++.+.+ |+++.+.+..     ......+.++.++..|          .
T Consensus         3 pksv~It----GaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l-----~~k~~~d~rvHii~Ldvt~deS~~~~~   73 (249)
T KOG1611|consen    3 PKSVFIT----GANRGIGLGLVKELLKDKGIEVIIATARDPEKAATEL-----ALKSKSDSRVHIIQLDVTCDESIDNFV   73 (249)
T ss_pred             CccEEEe----ccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHH-----HHhhccCCceEEEEEecccHHHHHHHH
Confidence            4569999    99999999999999986 66655555 5465532110     0011234566666655          2


Q ss_pred             hhHHhhhcCCCccEEEeCCCC---------------------Ch----hhHHHHHHHHHhCCCc-----------EEEEe
Q 018900          142 AEVGNVVGGVTFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVK-----------QFLFI  185 (349)
Q Consensus       142 ~~l~~~~~~~~~d~Vi~~a~~---------------------~~----~~~~~ll~~a~~~gv~-----------~~i~~  185 (349)
                      ++++++....+.+++|++||+                     |.    ..++.++-.++++..+           .+|++
T Consensus        74 ~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIini  153 (249)
T KOG1611|consen   74 QEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINI  153 (249)
T ss_pred             HHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEe
Confidence            445555445568999999993                     21    2244444444444333           68889


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCccc
Q 018900          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI  258 (349)
Q Consensus       186 Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  258 (349)
                      ||.+--  ..+  ..+.....|..+|.+.-.+.++       .++-++.+.||||--...+                   
T Consensus       154 sS~~~s--~~~--~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-------------------  210 (249)
T KOG1611|consen  154 SSSAGS--IGG--FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-------------------  210 (249)
T ss_pred             eccccc--cCC--CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-------------------
Confidence            885421  111  0111122223345444333332       2556788888887432211                   


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEee
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  296 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~  296 (349)
                            .-..+.+++-+.-+++.+.+-.. .+|..||..
T Consensus       211 ------~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~d  243 (249)
T KOG1611|consen  211 ------KKAALTVEESTSKLLASINKLKNEHNGGFFNRD  243 (249)
T ss_pred             ------CCcccchhhhHHHHHHHHHhcCcccCcceEccC
Confidence                  12236778888888888776544 455666653

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.10  E-value=1e-05  Score=71.65  Aligned_cols=64  Identities=19%  Similarity=0.227  Sum_probs=43.3

Q ss_pred             CcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHhhhcCCCccEEEeC
Q 018900           85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNVVGGVTFDVVLDN  159 (349)
Q Consensus        85 GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~~~~~~~~d~Vi~~  159 (349)
                      .++|++|++|+++|+++|++|+++.|...... .           ...+++++..+     .+.+.+.+.+  +|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~-----------~~~~v~~i~v~s~~~m~~~l~~~~~~--~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-E-----------PHPNLSIIEIENVDDLLETLEPLVKD--HDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC-C-----------CCCCeEEEEEecHHHHHHHHHHHhcC--CCEEEeC
Confidence            57899999999999999999999997642110 0           01234444333     2344455544  5999999


Q ss_pred             CCC
Q 018900          160 NGK  162 (349)
Q Consensus       160 a~~  162 (349)
                      |+.
T Consensus        89 AAv   91 (229)
T PRK06732         89 MAV   91 (229)
T ss_pred             Ccc
Confidence            995

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.09  E-value=1.8e-05  Score=90.44  Aligned_cols=152  Identities=17%  Similarity=0.190  Sum_probs=94.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCc--cc---------CCC--------C-----C---CC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENS--DK---------MKK--------P-----P---FN  124 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~--~~---------~~~--------~-----~---~~  124 (349)
                      +++.||||    ||++.||..++++|.++ |.+|++++|+....  ..         ++.        .     +   ..
T Consensus      1996 ~g~vvLVT----GGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813      1996 SDDVFLVT----GGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence            46799999    99999999999999998 69999999983100  00         000        0     0   00


Q ss_pred             -------------cccceec--CCCeEEEcC---hhhHHhhhcCC----CccEEEeCCCC--------------------
Q 018900          125 -------------RFNEIVS--AGGKTVWGD---PAEVGNVVGGV----TFDVVLDNNGK--------------------  162 (349)
Q Consensus       125 -------------~~~~l~~--~~~~~~~~D---~~~l~~~~~~~----~~d~Vi~~a~~--------------------  162 (349)
                                   ....+..  ..+.++.+|   .+.+.+++...    ++|.|||+||.                    
T Consensus      2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence                         0001111  124445555   55555554332    48999999993                    


Q ss_pred             ChhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----h-CCcEEEEecCceeeC
Q 018900          163 NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE----N-FSNWASFRPQYMIGS  236 (349)
Q Consensus       163 ~~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~----~-~~~~~ilR~~~v~g~  236 (349)
                      |+.++.++++++.....++||++||.. .||.....        .|..+|....++...    . ++++..+.+|.+-+.
T Consensus      2152 nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs--------~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAENIKLLALFSSAAGFYGNTGQS--------DYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCCcH--------HHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            577888999998877777899999964 55543221        122234333333222    1 577888998887654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN00106 malate dehydrogenase

Probab=98.05  E-value=3.8e-05  Score=71.31  Aligned_cols=99  Identities=16%  Similarity=0.192  Sum_probs=72.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEE-cChhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVW-GDPAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~-~D~~~l~~~~  148 (349)
                      ..||+||    |++|.+|..++..|..++  .+++.+++++.....         .++.+.  ...+.. .+.+++.+.+
T Consensus        18 ~~KV~Ii----GaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a---------~Dl~~~~~~~~i~~~~~~~d~~~~l   84 (323)
T PLN00106         18 GFKVAVL----GAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA---------ADVSHINTPAQVRGFLGDDQLGDAL   84 (323)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE---------chhhhCCcCceEEEEeCCCCHHHHc
Confidence            4699999    999999999999998766  489999987611111         121111  112211 2455677788


Q ss_pred             cCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+.  |+|||+||.              |...++++.+.+++.+.+.+|+++|
T Consensus        85 ~~a--DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvS  135 (323)
T PLN00106         85 KGA--DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIIS  135 (323)
T ss_pred             CCC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            886  999999993              6778999999999999989998888

>PRK06720 hypothetical protein; Provisional

Probab=97.99  E-value=2.3e-05  Score=66.00  Aligned_cols=78  Identities=23%  Similarity=0.311  Sum_probs=53.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      +++.++||    ||+|.||..++++|.++|++|++++|+.+...+..       .++.  ......+.+|   .+++.++
T Consensus        15 ~gk~~lVT----Ga~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~v~~~   83 (169)
T PRK06720         15 AGKVAIVT----GGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV-------EEITNLGGEALFVSYDMEKQGDWQRV   83 (169)
T ss_pred             CCCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            46789999    99999999999999999999999998764332110       1111  1123344555   4555543


Q ss_pred             h----cCC-CccEEEeCCC
Q 018900          148 V----GGV-TFDVVLDNNG  161 (349)
Q Consensus       148 ~----~~~-~~d~Vi~~a~  161 (349)
                      +    +.. ++|.+||++|
T Consensus        84 v~~~~~~~G~iDilVnnAG  102 (169)
T PRK06720         84 ISITLNAFSRIDMLFQNAG  102 (169)
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            3    222 4899999998

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.95  E-value=2.1e-05  Score=70.94  Aligned_cols=146  Identities=15%  Similarity=0.110  Sum_probs=93.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-------hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-------PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-------~~~l~  145 (349)
                      .+.=..||    |||..||+..+++|.++|++|+.+.|+.++++..++...+...    ..++++..|       .+.+.
T Consensus        48 ~g~WAVVT----GaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~----vev~~i~~Dft~~~~~ye~i~  119 (312)
T KOG1014|consen   48 LGSWAVVT----GATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK----VEVRIIAIDFTKGDEVYEKLL  119 (312)
T ss_pred             cCCEEEEE----CCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC----cEEEEEEEecCCCchhHHHHH
Confidence            34568899    9999999999999999999999999999877665433222221    123333334       45577


Q ss_pred             hhhcCCCccEEEeCCCC----------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK----------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~----------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +.+.+..+.++|+++|.                      |..    -++-++--+.+.+-.-+|++||..--     .|.
T Consensus       120 ~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----~p~  194 (312)
T KOG1014|consen  120 EKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----IPT  194 (312)
T ss_pred             HHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----ccC
Confidence            77778888999999993                      222    24444445555555679999985421     111


Q ss_pred             CCCCCCCCCCChHHHHHH------------HHhhCCcEEEEecCceeeCCC
Q 018900          200 VEGDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~------------~~~~~~~~~ilR~~~v~g~~~  238 (349)
                             |.-+.|.+.|.            .+..|+.+-.+-|..|-.+..
T Consensus       195 -------p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  195 -------PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             -------hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence                   11134444332            223378888888887766543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.89  E-value=1.7e-05  Score=76.03  Aligned_cols=92  Identities=25%  Similarity=0.428  Sum_probs=65.1

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCC-C-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSG-H-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g-~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+|.    || |++|+.+++.|++++ + +|++.+|+.+..+++...       +...+++....|   .+++.+++++.
T Consensus         1 Ilvl----G~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~l~~~~~~~   68 (386)
T PF03435_consen    1 ILVL----GA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEK-------LLGDRVEAVQVDVNDPESLAELLRGC   68 (386)
T ss_dssp             EEEE-------SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHTTS
T ss_pred             CEEE----cC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhh-------ccccceeEEEEecCCHHHHHHHHhcC
Confidence            7999    99 999999999999986 4 899999998765443211       122345555554   67788999887


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEe
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                        |+|||+++..  ....++++|.+.|+ ++|=+
T Consensus        69 --dvVin~~gp~--~~~~v~~~~i~~g~-~yvD~   97 (386)
T PF03435_consen   69 --DVVINCAGPF--FGEPVARACIEAGV-HYVDT   97 (386)
T ss_dssp             --SEEEE-SSGG--GHHHHHHHHHHHT--EEEES
T ss_pred             --CEEEECCccc--hhHHHHHHHHHhCC-Ceecc
Confidence              9999999966  56688888888886 66653

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.85  E-value=9.9e-05  Score=68.83  Aligned_cols=101  Identities=11%  Similarity=0.126  Sum_probs=62.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-------CeEEEEEcCCCCcccCCCCCCCcccceecC----CCeEEEcChh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDENSDKMKKPPFNRFNEIVSA----GGKTVWGDPA  142 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-------~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~D~~  142 (349)
                      ..||+||    |++|++|++++..|+..+       .+|+++++++.. +......    .++.+.    ..++  .+..
T Consensus         2 ~~kV~I~----GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~----~Dl~d~~~~~~~~~--~~~~   70 (325)
T cd01336           2 PIRVLVT----GAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVV----MELQDCAFPLLKSV--VATT   70 (325)
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-cccccee----eehhhccccccCCc--eecC
Confidence            4689999    999999999999998844       589999996531 1111110    111110    0011  1134


Q ss_pred             hHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC--CcEEEEecc
Q 018900          143 EVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG--VKQFLFISS  187 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g--v~~~i~~Ss  187 (349)
                      ++.+.++++  |+|||+||.              |+.-.+.+...+++..  -..+|.+|.
T Consensus        71 ~~~~~l~~a--DiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          71 DPEEAFKDV--DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             CHHHHhCCC--CEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            566667775  999999994              3444567777776663  334555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.76  E-value=0.00015  Score=67.26  Aligned_cols=99  Identities=21%  Similarity=0.263  Sum_probs=68.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHh---CCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEc-ChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWG-DPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~-D~~~l~~~~~  149 (349)
                      |||+|+    ||+|.+|++++..|..   .++++++++|++. ....      . -++.+ .....+.+ +.+++.+.++
T Consensus         1 ~KI~II----GAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~------a-lDl~~~~~~~~i~~~~~~d~~~~l~   68 (312)
T PRK05086          1 MKVAVL----GAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGV------A-VDLSHIPTAVKIKGFSGEDPTPALE   68 (312)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccce------e-hhhhcCCCCceEEEeCCCCHHHHcC
Confidence            689999    9999999999988854   3578999998743 2110      0 01211 11122332 2345555666


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +.  |+||.++|.              |....+++++.+++.+.+++|.+.|
T Consensus        69 ~~--DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         69 GA--DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            65  999999994              4557889999999999889988887

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.65  E-value=3.3e-05  Score=70.65  Aligned_cols=97  Identities=14%  Similarity=0.210  Sum_probs=69.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHh----CCCeEEEEEcCCCCcccCCCCCCC-cccceecCCCeEEEcC---hhhHHh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLG----SGHEVTIMTVGDENSDKMKKPPFN-RFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~----~g~~V~~l~R~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      -.++|.    ||+||.|.++++++++    +|...-+..|+++++.+....... .-.++. ..+ ++.+|   ++++.+
T Consensus         6 yDvVIy----GASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls-~~~-i~i~D~~n~~Sl~e   79 (423)
T KOG2733|consen    6 YDVVIY----GASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLS-SSV-ILIADSANEASLDE   79 (423)
T ss_pred             eeEEEE----ccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcc-cce-EEEecCCCHHHHHH
Confidence            469999    9999999999999999    688888899998766543211000 001111 122 44444   889999


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      ..+.+  .+|++|+|..-.--.+++.+|.++|.
T Consensus        80 mak~~--~vivN~vGPyR~hGE~VVkacienG~  110 (423)
T KOG2733|consen   80 MAKQA--RVIVNCVGPYRFHGEPVVKACIENGT  110 (423)
T ss_pred             HHhhh--EEEEeccccceecCcHHHHHHHHcCC
Confidence            98876  99999999766666777777777775

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.64  E-value=6.7e-05  Score=68.13  Aligned_cols=92  Identities=16%  Similarity=0.215  Sum_probs=63.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-hhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~l~~~~~~~  151 (349)
                      +...++|-    ||+||.|..++++|..+|..-..-.|+..+...+.        ....+....+... ++.+++.....
T Consensus         5 ~e~d~iiY----GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~--------~~LG~~~~~~p~~~p~~~~~~~~~~   72 (382)
T COG3268           5 REYDIIIY----GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALR--------ASLGPEAAVFPLGVPAALEAMASRT   72 (382)
T ss_pred             cceeEEEE----ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHH--------HhcCccccccCCCCHHHHHHHHhcc
Confidence            45679999    99999999999999999998877788876554322        2223344444444 88888888776


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSG  178 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~g  178 (349)
                        ++|+||+|.....-..++++|..+|
T Consensus        73 --~VVlncvGPyt~~g~plv~aC~~~G   97 (382)
T COG3268          73 --QVVLNCVGPYTRYGEPLVAACAAAG   97 (382)
T ss_pred             --eEEEeccccccccccHHHHHHHHhC
Confidence              9999999954333333333333333

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.59  E-value=0.00027  Score=62.44  Aligned_cols=93  Identities=22%  Similarity=0.318  Sum_probs=70.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh-hcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~-~~~  150 (349)
                      |+++|.     |.|.+|..+++.|.++||+|++++++++...+....         .....++.+|   ++.|.++ +.+
T Consensus         1 m~iiIi-----G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~~   66 (225)
T COG0569           1 MKIIII-----GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGIDD   66 (225)
T ss_pred             CEEEEE-----CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCCc
Confidence            578899     789999999999999999999999998655431110         1245666666   6667666 444


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        .|+++-..+.|.....-..-+++..|++++|
T Consensus        67 --aD~vva~t~~d~~N~i~~~la~~~~gv~~vi   97 (225)
T COG0569          67 --ADAVVAATGNDEVNSVLALLALKEFGVPRVI   97 (225)
T ss_pred             --CCEEEEeeCCCHHHHHHHHHHHHhcCCCcEE
Confidence              5999999998777666666677778988887

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.58  E-value=0.00039  Score=55.41  Aligned_cols=93  Identities=24%  Similarity=0.283  Sum_probs=58.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCC-CcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +||.|+    |.+|.+|+.+++.+.+ .++++.+.....+ ....   .....+......++.+    .+++++++..  
T Consensus         1 mrV~i~----G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g---~d~g~~~~~~~~~~~v----~~~l~~~~~~--   67 (124)
T PF01113_consen    1 MRVGIV----GASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG---KDVGELAGIGPLGVPV----TDDLEELLEE--   67 (124)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT---SBCHHHCTSST-SSBE----BS-HHHHTTH--
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc---chhhhhhCcCCccccc----chhHHHhccc--
Confidence            689999    9999999999999999 6888666654332 1110   0000000111112221    2667777766  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +|+||++.  +.+.+...++.|.+.|+ ++|
T Consensus        68 ~DVvIDfT--~p~~~~~~~~~~~~~g~-~~V   95 (124)
T PF01113_consen   68 ADVVIDFT--NPDAVYDNLEYALKHGV-PLV   95 (124)
T ss_dssp             -SEEEEES---HHHHHHHHHHHHHHT--EEE
T ss_pred             CCEEEEcC--ChHHhHHHHHHHHhCCC-CEE
Confidence            59999999  67888889999988886 444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.56  E-value=0.00066  Score=64.59  Aligned_cols=103  Identities=15%  Similarity=0.208  Sum_probs=65.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHh-hhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN-VVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~-~~~~  150 (349)
                      +++||.|+    ||||++|..+++.|.++ +++|+.+.+.....+.+...    +..+......    +.++++. .+++
T Consensus        37 ~~~kVaIv----GATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~----~~~l~~~~~~----~~~~~~~~~~~~  104 (381)
T PLN02968         37 EKKRIFVL----GASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV----FPHLITQDLP----NLVAVKDADFSD  104 (381)
T ss_pred             cccEEEEE----CCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh----CccccCcccc----ceecCCHHHhcC
Confidence            67899999    99999999999999998 67999999865433221111    1111111110    1112221 1444


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                        .|+|+.+.+.  ....+++..++ .| .++|-+|+..-+.+
T Consensus       105 --~DvVf~Alp~--~~s~~i~~~~~-~g-~~VIDlSs~fRl~~  141 (381)
T PLN02968        105 --VDAVFCCLPH--GTTQEIIKALP-KD-LKIVDLSADFRLRD  141 (381)
T ss_pred             --CCEEEEcCCH--HHHHHHHHHHh-CC-CEEEEcCchhccCC
Confidence              5999998775  46677777764 45 58999998765443

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.49  E-value=0.00011  Score=68.33  Aligned_cols=71  Identities=18%  Similarity=0.210  Sum_probs=51.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhC-C-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-G-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ..+++||||    ||+|++|+.++++|.++ | .+++++.|+.+....+..              ++..++..++++.+.
T Consensus       153 l~~k~VLVt----GAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~--------------el~~~~i~~l~~~l~  214 (340)
T PRK14982        153 LSKATVAVV----GATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA--------------ELGGGKILSLEEALP  214 (340)
T ss_pred             cCCCEEEEE----ccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH--------------HhccccHHhHHHHHc
Confidence            456899999    99999999999999865 5 689999997654432211              111234456777777


Q ss_pred             CCCccEEEeCCCC
Q 018900          150 GVTFDVVLDNNGK  162 (349)
Q Consensus       150 ~~~~d~Vi~~a~~  162 (349)
                      +.  |+|||+++.
T Consensus       215 ~a--DiVv~~ts~  225 (340)
T PRK14982        215 EA--DIVVWVASM  225 (340)
T ss_pred             cC--CEEEECCcC
Confidence            65  999999985

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.42  E-value=0.00014  Score=62.63  Aligned_cols=81  Identities=21%  Similarity=0.270  Sum_probs=55.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE---cChhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~D~~~l~~~~  148 (349)
                      .+.++++|+    ||+|.+|+.+++.|.+.|++|+++.|+.+....+...    +.+.  .+.++..   .|.+++.+.+
T Consensus        26 l~~~~vlVl----GgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~----l~~~--~~~~~~~~~~~~~~~~~~~~   95 (194)
T cd01078          26 LKGKTAVVL----GGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADS----LRAR--FGEGVGAVETSDDAARAAAI   95 (194)
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHhh--cCCcEEEeeCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999986544322110    0000  0222222   2456677777


Q ss_pred             cCCCccEEEeCCCCCh
Q 018900          149 GGVTFDVVLDNNGKNL  164 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~  164 (349)
                      .+.  |+||++.....
T Consensus        96 ~~~--diVi~at~~g~  109 (194)
T cd01078          96 KGA--DVVFAAGAAGV  109 (194)
T ss_pred             hcC--CEEEECCCCCc
Confidence            665  99998776443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.40  E-value=0.0013  Score=61.59  Aligned_cols=93  Identities=18%  Similarity=0.229  Sum_probs=61.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      |++|+|+    ||||++|+.+++.|.++||   +++++.+.......+.         +  .+.+....|.+..  .+.+
T Consensus         1 ~~~V~Iv----GAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~---------~--~g~~i~v~d~~~~--~~~~   63 (334)
T PRK14874          1 GYNVAVV----GATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS---------F--KGKELKVEDLTTF--DFSG   63 (334)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee---------e--CCceeEEeeCCHH--HHcC
Confidence            4689999    9999999999999999877   4588887654333221         1  1233444444322  2344


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                        +|+||.+.+..  ..+.++..+.+.|. .+|=+|+.
T Consensus        64 --vDvVf~A~g~g--~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         64 --VDIALFSAGGS--VSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             --CCEEEECCChH--HHHHHHHHHHhCCC-EEEECCch
Confidence              59999988744  45566666666776 56656653

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.39  E-value=0.0017  Score=61.26  Aligned_cols=107  Identities=21%  Similarity=0.221  Sum_probs=61.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCC--CCCcccceec--CCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKP--PFNRFNEIVS--AGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~--~~~~~~~l~~--~~~~~~~~D~~~l~~~  147 (349)
                      |++||+|+    ||+|++|+.+++.|.+..+ +++++.+...+..+....  +...+..+..  ..+.+...|++.+   
T Consensus         2 ~~~~V~I~----GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---   74 (349)
T PRK08664          2 MKLKVGIL----GATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAV---   74 (349)
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHh---
Confidence            56899999    9999999999999998754 888886654333221110  0000000110  1222322344432   


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy  191 (349)
                       .+  .|+|+.+.+.++  ...+++.+.+.|++.|.+.++...+
T Consensus        75 -~~--~DvVf~a~p~~~--s~~~~~~~~~~G~~vIDls~~fR~~  113 (349)
T PRK08664         75 -DD--VDIVFSALPSDV--AGEVEEEFAKAGKPVFSNASAHRMD  113 (349)
T ss_pred             -cC--CCEEEEeCChhH--HHHHHHHHHHCCCEEEECCchhcCC
Confidence             33  599988777653  3556677777887555544444444

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.39  E-value=0.00021  Score=66.34  Aligned_cols=105  Identities=19%  Similarity=0.225  Sum_probs=66.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCC-------------CeEEEcCh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG-------------GKTVWGDP  141 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~D~  141 (349)
                      ++|.|+    | .|.+|..++..|++.|++|++.+|+++..+.........+..+...+             ++ ..   
T Consensus         3 ~~V~VI----G-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~-~~---   73 (308)
T PRK06129          3 GSVAII----G-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIR-VT---   73 (308)
T ss_pred             cEEEEE----C-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeE-EE---
Confidence            579999    5 99999999999999999999999987543321100000000011111             11 11   


Q ss_pred             hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccc
Q 018900          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (349)
Q Consensus       142 ~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~v  190 (349)
                      .++.+++.++  |+|+.+...+......++..+........|+.|+...
T Consensus        74 ~~~~~a~~~a--d~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~  120 (308)
T PRK06129         74 DSLADAVADA--DYVQESAPENLELKRALFAELDALAPPHAILASSTSA  120 (308)
T ss_pred             CcHHHhhCCC--CEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCC
Confidence            2455556555  9999999888777777777666554445666666554

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.31  E-value=0.0022  Score=60.18  Aligned_cols=112  Identities=22%  Similarity=0.354  Sum_probs=72.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCc-----------------ccceecCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR-----------------FNEIVSAG  133 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~-----------------~~~l~~~~  133 (349)
                      -+.++|||+    | .|-+|+++++.|...|. ++++++++.-+...+..+.+-.                 +.++ .++
T Consensus        22 L~~~~VlIi----G-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-np~   95 (338)
T PRK12475         22 IREKHVLIV----G-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-NSE   95 (338)
T ss_pred             hcCCcEEEE----C-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH-CCC
Confidence            356789999    5 57799999999999997 8999998763333322211110                 0111 123


Q ss_pred             C--eEEEcC--hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          134 G--KTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       134 ~--~~~~~D--~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +  +.+..|  .+.+++++.+.  |+||.+.. |...-..+-++|++.++ .+|+.+..+.+|.
T Consensus        96 v~i~~~~~~~~~~~~~~~~~~~--DlVid~~D-~~~~r~~in~~~~~~~i-p~i~~~~~g~~G~  155 (338)
T PRK12475         96 VEIVPVVTDVTVEELEELVKEV--DLIIDATD-NFDTRLLINDLSQKYNI-PWIYGGCVGSYGV  155 (338)
T ss_pred             cEEEEEeccCCHHHHHHHhcCC--CEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEEecccEEE
Confidence            3  334333  46677788775  99999885 55544556678888886 6888777666653

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.30  E-value=0.0019  Score=60.52  Aligned_cols=112  Identities=23%  Similarity=0.388  Sum_probs=73.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------e--cCCC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------V--SAGG-  134 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~--~~~~-  134 (349)
                      +..+|+|+    | .|.+|+.+++.|...|. ++++++++.-+...+..+.+....++              .  .+.+ 
T Consensus        23 ~~~~VlVv----G-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~   97 (339)
T PRK07688         23 REKHVLII----G-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVR   97 (339)
T ss_pred             cCCcEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcE
Confidence            46789999    5 59999999999999997 89999987533322222211110111              0  1233 


Q ss_pred             -eEEEcC--hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          135 -KTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       135 -~~~~~D--~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                       +.+..+  .+.+.+++.+.  |+||.+.. |...-..+-++|.+.++ .+|+.+..+.||.
T Consensus        98 v~~~~~~~~~~~~~~~~~~~--DlVid~~D-n~~~r~~ln~~~~~~~i-P~i~~~~~g~~G~  155 (339)
T PRK07688         98 VEAIVQDVTAEELEELVTGV--DLIIDATD-NFETRFIVNDAAQKYGI-PWIYGACVGSYGL  155 (339)
T ss_pred             EEEEeccCCHHHHHHHHcCC--CEEEEcCC-CHHHHHHHHHHHHHhCC-CEEEEeeeeeeeE
Confidence             233333  56677777775  99999866 55666667778888886 6888887776664

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.26  E-value=0.00035  Score=58.43  Aligned_cols=103  Identities=20%  Similarity=0.291  Sum_probs=63.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccc---ceecCCCeEEE---cChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EIVSAGGKTVW---GDPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~---~l~~~~~~~~~---~D~~~l~~~  147 (349)
                      |++|-++     |.|-+|+.+++.|++.||+|++.+|+++..+++.........   ++. ...+++.   .|.+.++++
T Consensus         1 m~~Ig~I-----GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~-~~~dvvi~~v~~~~~v~~v   74 (163)
T PF03446_consen    1 MMKIGFI-----GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAA-EQADVVILCVPDDDAVEAV   74 (163)
T ss_dssp             -BEEEEE-------SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHH-HHBSEEEE-SSSHHHHHHH
T ss_pred             CCEEEEE-----chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHh-hcccceEeecccchhhhhh
Confidence            6899999     679999999999999999999999987655433222111111   111 1112222   244445444


Q ss_pred             hcC-------CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          148 VGG-------VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       148 ~~~-------~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +.+       .+-.++|++...+....+.+.+.+.+.|+ +||
T Consensus        75 ~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~-~~v  116 (163)
T PF03446_consen   75 LFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGV-RYV  116 (163)
T ss_dssp             HHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTE-EEE
T ss_pred             hhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccc-eee
Confidence            433       13578888999899999999999888884 454

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.22  E-value=0.0011  Score=63.39  Aligned_cols=73  Identities=25%  Similarity=0.308  Sum_probs=51.3

Q ss_pred             ccceEEEEEecCCCc----------------ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe
Q 018900           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK  135 (349)
Q Consensus        72 ~~~~~VLVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~  135 (349)
                      .++++||||    ||                +|.+|.+++++|.++|++|++++++.+ ..    .+         .++.
T Consensus       186 l~gk~vlIT----gG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~----~~---------~~~~  247 (399)
T PRK05579        186 LAGKRVLIT----AGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP----TP---------AGVK  247 (399)
T ss_pred             cCCCEEEEe----CCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc----CC---------CCcE
Confidence            467899999    99                999999999999999999999998652 11    00         0122


Q ss_pred             -EEEcChhhHHhhhcC-C-CccEEEeCCCC
Q 018900          136 -TVWGDPAEVGNVVGG-V-TFDVVLDNNGK  162 (349)
Q Consensus       136 -~~~~D~~~l~~~~~~-~-~~d~Vi~~a~~  162 (349)
                       +...+.+++.+.+.. . ++|++||+||+
T Consensus       248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav  277 (399)
T PRK05579        248 RIDVESAQEMLDAVLAALPQADIFIMAAAV  277 (399)
T ss_pred             EEccCCHHHHHHHHHHhcCCCCEEEEcccc
Confidence             222345555554432 1 37999999994

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.18  E-value=0.0056  Score=49.38  Aligned_cols=110  Identities=19%  Similarity=0.313  Sum_probs=73.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeEE-
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKTV-  137 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~~-  137 (349)
                      .++|+|+     |.|-+|+.+++.|...|. ++++++.+.-+...+..+.+....++              ..+.+++. 
T Consensus         2 ~~~v~ii-----G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~   76 (135)
T PF00899_consen    2 NKRVLII-----GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEA   76 (135)
T ss_dssp             T-EEEEE-----STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEE
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeee
Confidence            4689999     789999999999999997 79999887644444433322111111              12333333 


Q ss_pred             -EcC--hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          138 -WGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       138 -~~D--~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                       ..+  .+.+.+.+++.  |+||.+.. +......+-+.|++.++ +||..+..+.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~--d~vi~~~d-~~~~~~~l~~~~~~~~~-p~i~~~~~g~~G  130 (135)
T PF00899_consen   77 IPEKIDEENIEELLKDY--DIVIDCVD-SLAARLLLNEICREYGI-PFIDAGVNGFYG  130 (135)
T ss_dssp             EESHCSHHHHHHHHHTS--SEEEEESS-SHHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             eecccccccccccccCC--CEEEEecC-CHHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence             222  46677778665  99998766 46667778889999887 788888766655

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.17  E-value=0.00091  Score=62.27  Aligned_cols=170  Identities=9%  Similarity=0.034  Sum_probs=92.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcCCCC--cccCCCCCCCcccceecCCCeEEEcChhhH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l  144 (349)
                      .+||.|+    |++|.+|..++..|+.+|.       +++.++++++.  +.........-...+. .++.+..+|    
T Consensus         2 p~KV~Ii----Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~~~~----   72 (322)
T cd01338           2 PVRVAVT----GAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLL-AEIVITDDP----   72 (322)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccccc-CceEEecCc----
Confidence            5699999    9999999999999998874       79999885432  2221110000000000 122322222    


Q ss_pred             HhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC--CcEEEEecccc---ccCCCCCCC-CCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG--VKQFLFISSAG---IYKPADEPP-HVEGDV  204 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~---vy~~~~~~~-~~e~~~  204 (349)
                      .+.+.+.  |+||.+||.              |..-.+.+...+++.+  -..+|.+|-..   +|-.....+ +.....
T Consensus        73 ~~~~~da--DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~V  150 (322)
T cd01338          73 NVAFKDA--DWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNF  150 (322)
T ss_pred             HHHhCCC--CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHhe
Confidence            3445555  999999994              3455777777777765  33556565321   110000000 111111


Q ss_pred             CCCCCChHHHHHHH----HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcc
Q 018900          205 VKPDAGHVQVEKYI----SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (349)
Q Consensus       205 ~~~~~~k~~~ek~~----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~  257 (349)
                      .  ..++...+++.    +..+++...+|..+|||++.+ ..+..|......|.++.
T Consensus       151 i--G~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~  204 (322)
T cd01338         151 T--AMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAA  204 (322)
T ss_pred             E--EehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHH
Confidence            1  11444444432    334889899998889999854 34444444444555543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.15  E-value=0.003  Score=49.97  Aligned_cols=96  Identities=19%  Similarity=0.193  Sum_probs=54.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCC-CcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      ||.|+    |+||++|+.+++.|.+.. +++..+..... ....+.... ......  ..+.+...|.+.+    .+  .
T Consensus         1 rV~Iv----GAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~-~~~~~~--~~~~~~~~~~~~~----~~--~   67 (121)
T PF01118_consen    1 RVAIV----GATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVF-PHPKGF--EDLSVEDADPEEL----SD--V   67 (121)
T ss_dssp             EEEEE----STTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTT-GGGTTT--EEEBEEETSGHHH----TT--E
T ss_pred             CEEEE----CCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhc-cccccc--cceeEeecchhHh----hc--C
Confidence            69999    999999999999999863 46666555444 222111110 000000  1122222233333    33  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      |+|+.|.+  -.....+...+.+.|+ ++|=.|+
T Consensus        68 Dvvf~a~~--~~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   68 DVVFLALP--HGASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             SEEEE-SC--HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred             CEEEecCc--hhHHHHHHHHHhhCCc-EEEeCCH
Confidence            99999976  3445677777777787 6665554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.13  E-value=0.0049  Score=53.27  Aligned_cols=112  Identities=21%  Similarity=0.296  Sum_probs=72.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcc--cc--------------eecCCCe
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRF--NE--------------IVSAGGK  135 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~--~~--------------l~~~~~~  135 (349)
                      +..+|+|+    |+.| +|.++++.|...|. ++++++.+.-....+..+.+...  .+              -..+.++
T Consensus        18 ~~s~Vlvi----G~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~   92 (198)
T cd01485          18 RSAKVLII----GAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVK   92 (198)
T ss_pred             hhCcEEEE----CCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCE
Confidence            45789999    7777 99999999999995 69899876533322222111000  00              0123343


Q ss_pred             EEE--cC----hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          136 TVW--GD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       136 ~~~--~D----~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +..  .+    .+...+.+..  +|+||.+.. +......+-+.|++.++ .||+.++.+.||.
T Consensus        93 i~~~~~~~~~~~~~~~~~~~~--~dvVi~~~d-~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~  152 (198)
T cd01485          93 LSIVEEDSLSNDSNIEEYLQK--FTLVIATEE-NYERTAKVNDVCRKHHI-PFISCATYGLIGY  152 (198)
T ss_pred             EEEEecccccchhhHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence            322  22    2344556665  499997744 56666777889999886 7888888777775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.12  E-value=0.0018  Score=55.28  Aligned_cols=61  Identities=20%  Similarity=0.237  Sum_probs=38.0

Q ss_pred             cccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHhhhcCCCccEEEeCC
Q 018900           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNVVGGVTFDVVLDNN  160 (349)
Q Consensus        86 gtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~~~~~~~~d~Vi~~a  160 (349)
                      .||..|..|++++..+|++|+.+..... ..             ...+++.+...     .+.+.+.+.+.  |++||+|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-------------~p~~~~~i~v~sa~em~~~~~~~~~~~--Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LP-------------PPPGVKVIRVESAEEMLEAVKELLPSA--DIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGGGG--SEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-------------ccccceEEEecchhhhhhhhccccCcc--eeEEEec
Confidence            4789999999999999999999998742 11             01255555554     34444555554  9999999


Q ss_pred             CC
Q 018900          161 GK  162 (349)
Q Consensus       161 ~~  162 (349)
                      ++
T Consensus        91 AV   92 (185)
T PF04127_consen   91 AV   92 (185)
T ss_dssp             B-
T ss_pred             ch
Confidence            94

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.09  E-value=0.0044  Score=51.29  Aligned_cols=195  Identities=13%  Similarity=0.201  Sum_probs=107.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++...|||    ||...+|+..++.|.++|..|..++....+.....       +++- .++-+...|   ++++..++.
T Consensus         8 kglvalvt----ggasglg~ataerlakqgasv~lldlp~skg~~va-------kelg-~~~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    8 KGLVALVT----GGASGLGKATAERLAKQGASVALLDLPQSKGADVA-------KELG-GKVVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             cCeeEEee----cCcccccHHHHHHHHhcCceEEEEeCCcccchHHH-------HHhC-CceEEeccccCcHHHHHHHHH
Confidence            45568999    99999999999999999999999998664433211       2221 123334444   666666654


Q ss_pred             CC-----CccEEEeCCCC--------------------------ChhhHHHHHHHHHh----C----CCcE--EEEeccc
Q 018900          150 GV-----TFDVVLDNNGK--------------------------NLDAVRPVADWAKS----S----GVKQ--FLFISSA  188 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------------~~~~~~~ll~~a~~----~----gv~~--~i~~Ss~  188 (349)
                      ..     +.|+.++|+|.                          |+.++.|+++....    .    +-+|  +|..-|.
T Consensus        76 ~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv  155 (260)
T KOG1199|consen   76 KAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV  155 (260)
T ss_pred             HHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence            33     37999999992                          34555566553211    1    1122  4444454


Q ss_pred             cccCCCCCCCCCCCCCCCCCCChHH-------HHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHH-hCCCcccCC
Q 018900          189 GIYKPADEPPHVEGDVVKPDAGHVQ-------VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV-RKRPVPIPG  260 (349)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~k~~-------~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~  260 (349)
                      ..|....+..       .+..+|.+       ..+-+.-.|+++..+-||.+--|.... +.+ -+...+ +.-|  .+.
T Consensus       156 aafdgq~gqa-------aysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss-lpe-kv~~fla~~ip--fps  224 (260)
T KOG1199|consen  156 AAFDGQTGQA-------AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS-LPE-KVKSFLAQLIP--FPS  224 (260)
T ss_pred             eeecCccchh-------hhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh-hhH-HHHHHHHHhCC--Cch
Confidence            4444332210       01112222       122222337888888887654443221 111 122222 2222  221


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                            ..-|..+-+..+-.+++++-- ||+++.+.+
T Consensus       225 ------rlg~p~eyahlvqaiienp~l-ngevir~dg  254 (260)
T KOG1199|consen  225 ------RLGHPHEYAHLVQAIIENPYL-NGEVIRFDG  254 (260)
T ss_pred             ------hcCChHHHHHHHHHHHhCccc-CCeEEEecc
Confidence                  123556777888888888765 347776654

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.08  E-value=0.0028  Score=59.69  Aligned_cols=101  Identities=20%  Similarity=0.132  Sum_probs=60.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ||+||+|+    ||||++|+.+++.|.+. +++++++.+..+....+...    +..+... ......+.+..  .+.+ 
T Consensus         1 ~m~kVaIi----GAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~----~~~~~~~-~~~~~~~~~~~--~~~~-   68 (343)
T PRK00436          1 MMIKVGIV----GASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDV----HPHLRGL-VDLVLEPLDPE--ILAG-   68 (343)
T ss_pred             CCeEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHh----Ccccccc-cCceeecCCHH--HhcC-
Confidence            56899999    99999999999999887 67888877743322211110    0001100 01111122222  2333 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                       +|+|+.+...  ....+++..+.+.|+ ++|=.|+..
T Consensus        69 -vD~Vf~alP~--~~~~~~v~~a~~aG~-~VID~S~~f  102 (343)
T PRK00436         69 -ADVVFLALPH--GVSMDLAPQLLEAGV-KVIDLSADF  102 (343)
T ss_pred             -CCEEEECCCc--HHHHHHHHHHHhCCC-EEEECCccc
Confidence             6999987775  345666776766774 788777643

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.05  E-value=0.0019  Score=63.15  Aligned_cols=89  Identities=29%  Similarity=0.383  Sum_probs=60.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      +.++|+|+    |+++ +|..+++.|+++|++|++.++.... ..+       ...++...+++++.+|..+  ....+ 
T Consensus         4 ~~k~v~ii----G~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~--~~~~~-   68 (450)
T PRK14106          4 KGKKVLVV----GAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKE-------ALEELGELGIELVLGEYPE--EFLEG-   68 (450)
T ss_pred             CCCEEEEE----CCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHH-------HHHHHHhcCCEEEeCCcch--hHhhc-
Confidence            46899999    8888 9999999999999999999987521 110       1123333467777777443  23333 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                       +|+||++++..  ....++.+|++.|+
T Consensus        69 -~d~vv~~~g~~--~~~~~~~~a~~~~i   93 (450)
T PRK14106         69 -VDLVVVSPGVP--LDSPPVVQAHKKGI   93 (450)
T ss_pred             -CCEEEECCCCC--CCCHHHHHHHHCCC
Confidence             59999998853  22346666666554

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.97  E-value=0.0049  Score=57.13  Aligned_cols=103  Identities=20%  Similarity=0.328  Sum_probs=61.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCC--CeEEEcChhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~D~~~l~~~~~~  150 (349)
                      |||.|+    |++|++|..++..|+..|+  +|++++|.. ..+++.....+-.+.+...+  .++..+  .+.+. +.+
T Consensus         1 ~kI~Ii----GatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d~~~-l~~   72 (309)
T cd05294           1 MKVSII----GASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYDALAAAGIDAEIKIS--SDLSD-VAG   72 (309)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhhchhccCCCcEEEEC--CCHHH-hCC
Confidence            689999    9999999999999999986  599999954 22222211111111111111  222222  12333 666


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEecc
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~Ss  187 (349)
                      .  |+||-++|.              |....+.+++.+.+.+- ..+|.+++
T Consensus        73 a--DiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          73 S--DIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             C--CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            5  999999883              23446666666665543 35666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.96  E-value=0.0064  Score=56.92  Aligned_cols=94  Identities=16%  Similarity=0.237  Sum_probs=57.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe---EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~---V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +|++|.|+    ||||++|..+++.|.+++|.   ++.+... ++..+...        +  .+.+....+.+..+  +.
T Consensus         3 ~~~~IaIv----GATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~--------~--~~~~l~~~~~~~~~--~~   65 (336)
T PRK05671          3 QPLDIAVV----GATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP--------F--AGKNLRVREVDSFD--FS   65 (336)
T ss_pred             CCCEEEEE----ccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec--------c--CCcceEEeeCChHH--hc
Confidence            35799999    99999999999999987764   3344333 22211100        1  11122222222221  34


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +  +|.|+.+.+.  .....++..+.+.|+ ++|=.|+.
T Consensus        66 ~--vD~vFla~p~--~~s~~~v~~~~~~G~-~VIDlS~~   99 (336)
T PRK05671         66 Q--VQLAFFAAGA--AVSRSFAEKARAAGC-SVIDLSGA   99 (336)
T ss_pred             C--CCEEEEcCCH--HHHHHHHHHHHHCCC-eEEECchh
Confidence            4  5999998874  345668888888886 57766664

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=96.94  E-value=0.0016  Score=57.65  Aligned_cols=64  Identities=17%  Similarity=0.277  Sum_probs=40.7

Q ss_pred             CcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh----cCC-CccEEEeC
Q 018900           85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV----GGV-TFDVVLDN  159 (349)
Q Consensus        85 GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~----~~~-~~d~Vi~~  159 (349)
                      .++|.+|++++++|.++|++|+++.|... ...   ..          ...+...|.+++.+++    +.. ++|++||+
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~---~~----------~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRA-LKP---EP----------HPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhh-ccc---cc----------CCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            56889999999999999999999876321 100   00          1122333544444332    222 37999999


Q ss_pred             CCC
Q 018900          160 NGK  162 (349)
Q Consensus       160 a~~  162 (349)
                      ||.
T Consensus        88 Agv   90 (227)
T TIGR02114        88 MAV   90 (227)
T ss_pred             CEe
Confidence            995

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd00704 MDH Malate dehydrogenase

Probab=96.88  E-value=0.0071  Score=56.37  Aligned_cols=94  Identities=15%  Similarity=0.188  Sum_probs=61.3

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCC-------CeEEEEEcCC--CCcccCCCCCCCcccceecC------CCeEEEcC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGD--ENSDKMKKPPFNRFNEIVSA------GGKTVWGD  140 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g-------~~V~~l~R~~--~~~~~~~~~~~~~~~~l~~~------~~~~~~~D  140 (349)
                      ||.|+    |++|.+|+.++..|..+|       ++++.+++++  +......       .++.+.      +.. +.  
T Consensus         2 KV~Ii----GAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~-------~Dl~d~~~~~~~~~~-i~--   67 (323)
T cd00704           2 HVLIT----GAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVV-------MELQDCAFPLLKGVV-IT--   67 (323)
T ss_pred             EEEEE----CCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceee-------eehhhhcccccCCcE-Ee--
Confidence            79999    999999999999998765       2599999876  3222111       111111      121 11  


Q ss_pred             hhhHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC-C-cEEEEec
Q 018900          141 PAEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-V-KQFLFIS  186 (349)
Q Consensus       141 ~~~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g-v-~~~i~~S  186 (349)
                       .+..+.++++  |+|||+||.              |..-.+.+...+++.. - ..+|.+|
T Consensus        68 -~~~~~~~~~a--DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 -TDPEEAFKDV--DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             -cChHHHhCCC--CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence             2345566666  999999994              4566788888887773 3 3455555

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.86  E-value=0.015  Score=47.38  Aligned_cols=108  Identities=20%  Similarity=0.330  Sum_probs=67.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE--EE
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT--VW  138 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~--~~  138 (349)
                      +|+|+    | .|-+|.++++.|...|. ++++++.+.-....+..+.+....++              ..+++++  +.
T Consensus         1 ~Vlii----G-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~   75 (143)
T cd01483           1 RVLLV----G-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVP   75 (143)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEe
Confidence            58999    6 59999999999999997 69998876533333322211111111              0123333  22


Q ss_pred             cC--hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          139 GD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       139 ~D--~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      .+  .....+.+..  +|+||.+... ......+.++|++.++ .||..++.+.+|
T Consensus        76 ~~~~~~~~~~~~~~--~diVi~~~d~-~~~~~~l~~~~~~~~i-~~i~~~~~g~~g  127 (143)
T cd01483          76 EGISEDNLDDFLDG--VDLVIDAIDN-IAVRRALNRACKELGI-PVIDAGGLGLGG  127 (143)
T ss_pred             eecChhhHHHHhcC--CCEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEcCCCcEE
Confidence            22  2223455555  4999998875 6677788889999886 688777655433

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.85  E-value=0.011  Score=51.31  Aligned_cols=112  Identities=19%  Similarity=0.242  Sum_probs=72.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCC---------------cccceecCCCe
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGK  135 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~---------------~~~~l~~~~~~  135 (349)
                      -...+|+|+     |.|-+|.++++.|...|. ++++++++.-+...+..+.+-               ++.++ .+.++
T Consensus        19 l~~~~Vlvi-----G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~   92 (202)
T TIGR02356        19 LLNSHVLII-----GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL-NSDIQ   92 (202)
T ss_pred             hcCCCEEEE-----CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh-CCCCE
Confidence            346789999     689999999999999996 899999874322222211100               00111 12333


Q ss_pred             EEEc----ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          136 TVWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       136 ~~~~----D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +...    +.+.+.+.+.+.  |+||.+.. +...-..+-+.|++.++ .||+.+..+.+|.
T Consensus        93 i~~~~~~i~~~~~~~~~~~~--D~Vi~~~d-~~~~r~~l~~~~~~~~i-p~i~~~~~g~~G~  150 (202)
T TIGR02356        93 VTALKERVTAENLELLINNV--DLVLDCTD-NFATRYLINDACVALGT-PLISAAVVGFGGQ  150 (202)
T ss_pred             EEEehhcCCHHHHHHHHhCC--CEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCeEE
Confidence            3222    245567777765  99998864 55666667778888886 6888877666554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.82  E-value=0.013  Score=51.84  Aligned_cols=113  Identities=15%  Similarity=0.208  Sum_probs=71.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      -+..+|+|+     |.|-+|.++++.|...|. ++++++.+.-....+..+.+....++              ..+.+++
T Consensus        19 L~~~~Vliv-----G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i   93 (228)
T cd00757          19 LKNARVLVV-----GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEI   93 (228)
T ss_pred             HhCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEE
Confidence            346799999     689999999999999996 78888765432222222111111011              0122332


Q ss_pred             --EEcC--hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          137 --VWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       137 --~~~D--~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                        +..+  .+.+.+.+.+.  |+||.+.. +...-..+-++|++.++ .+|+.+..+.+|.
T Consensus        94 ~~~~~~i~~~~~~~~~~~~--DvVi~~~d-~~~~r~~l~~~~~~~~i-p~i~~g~~g~~g~  150 (228)
T cd00757          94 EAYNERLDAENAEELIAGY--DLVLDCTD-NFATRYLINDACVKLGK-PLVSGAVLGFEGQ  150 (228)
T ss_pred             EEecceeCHHHHHHHHhCC--CEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCEEE
Confidence              2222  45667777665  99999877 55666667778888885 7888776555543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.82  E-value=0.0011  Score=53.69  Aligned_cols=77  Identities=18%  Similarity=0.275  Sum_probs=53.7

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ...+++|||+    |+ |..|+.++++|.+.|.+ |+++.|+.++..++..       .+  .+..+-..+.+++...+.
T Consensus         9 ~l~~~~vlvi----Ga-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~-------~~--~~~~~~~~~~~~~~~~~~   74 (135)
T PF01488_consen    9 DLKGKRVLVI----GA-GGAARAVAAALAALGAKEITIVNRTPERAEALAE-------EF--GGVNIEAIPLEDLEEALQ   74 (135)
T ss_dssp             TGTTSEEEEE----SS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHH-------HH--TGCSEEEEEGGGHCHHHH
T ss_pred             CcCCCEEEEE----CC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHH-------Hc--CccccceeeHHHHHHHHh
Confidence            3467899999    65 88999999999999975 9999998765543211       11  122233335566777777


Q ss_pred             CCCccEEEeCCCCC
Q 018900          150 GVTFDVVLDNNGKN  163 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~  163 (349)
                      +.  |+||++.+..
T Consensus        75 ~~--DivI~aT~~~   86 (135)
T PF01488_consen   75 EA--DIVINATPSG   86 (135)
T ss_dssp             TE--SEEEE-SSTT
T ss_pred             hC--CeEEEecCCC
Confidence            65  9999987744

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.82  E-value=0.0037  Score=61.13  Aligned_cols=92  Identities=22%  Similarity=0.355  Sum_probs=61.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhh-hcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-VGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~-~~~  150 (349)
                      |+|+|+    |+ |.+|+.+++.|.++|++|++++++++....+..          ..+++++.+|.   ..+.++ +.+
T Consensus         1 m~viIi----G~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~~   65 (453)
T PRK09496          1 MKIIIV----GA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAED   65 (453)
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCCc
Confidence            589999    76 999999999999999999999998754432211          13577888873   445554 444


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~  184 (349)
                        .|.||-+...+. ....++..+++. +..++|.
T Consensus        66 --a~~vi~~~~~~~-~n~~~~~~~r~~~~~~~ii~   97 (453)
T PRK09496         66 --ADLLIAVTDSDE-TNMVACQIAKSLFGAPTTIA   97 (453)
T ss_pred             --CCEEEEecCChH-HHHHHHHHHHHhcCCCeEEE
Confidence              588888766432 223344556665 6555543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.82  E-value=0.0054  Score=58.55  Aligned_cols=73  Identities=25%  Similarity=0.334  Sum_probs=49.6

Q ss_pred             ccceEEEEEecCCCc----------------ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe
Q 018900           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK  135 (349)
Q Consensus        72 ~~~~~VLVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~  135 (349)
                      .++++||||    ||                +|.+|..++++|..+|++|+.+.+......              ..++.
T Consensus       183 ~~~~~vlit----~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--------------~~~~~  244 (390)
T TIGR00521       183 LEGKRVLIT----AGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--------------PPGVK  244 (390)
T ss_pred             cCCceEEEe----cCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--------------CCCcE
Confidence            467899999    87                478999999999999999999887653210              01122


Q ss_pred             -EEEcChhhH-HhhhcC-C-CccEEEeCCCC
Q 018900          136 -TVWGDPAEV-GNVVGG-V-TFDVVLDNNGK  162 (349)
Q Consensus       136 -~~~~D~~~l-~~~~~~-~-~~d~Vi~~a~~  162 (349)
                       ....+.+++ +.+++. . +.|++|++|++
T Consensus       245 ~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aav  275 (390)
T TIGR00521       245 SIKVSTAEEMLEAALNELAKDFDIFISAAAV  275 (390)
T ss_pred             EEEeccHHHHHHHHHHhhcccCCEEEEcccc
Confidence             222245555 444421 1 36999999994

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.81  E-value=0.015  Score=51.99  Aligned_cols=94  Identities=16%  Similarity=0.261  Sum_probs=71.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~  149 (349)
                      ||++|||.    |||+ =|+.|++.|.+.|++|++.+-......             ...++++..|   |.+++.+.+.
T Consensus         1 ~~~~Ilvl----gGT~-egr~la~~L~~~g~~v~~Svat~~g~~-------------~~~~~~v~~G~l~~~~~l~~~l~   62 (248)
T PRK08057          1 MMPRILLL----GGTS-EARALARALAAAGVDIVLSLAGRTGGP-------------ADLPGPVRVGGFGGAEGLAAYLR   62 (248)
T ss_pred             CCceEEEE----echH-HHHHHHHHHHhCCCeEEEEEccCCCCc-------------ccCCceEEECCCCCHHHHHHHHH
Confidence            57889999    8887 499999999999999888776653221             0123444444   6799999999


Q ss_pred             CCCccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEE
Q 018900          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      +.++++||+..=. .....+++.++|++.++..+=|
T Consensus        63 ~~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         63 EEGIDLVIDATHPYAAQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             HCCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEE
Confidence            9899999986553 3567889999999999865544

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.78  E-value=0.014  Score=50.45  Aligned_cols=112  Identities=18%  Similarity=0.268  Sum_probs=69.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccc--------------eecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~--------------l~~~~~~~~  137 (349)
                      +..+|||+    |+.| +|.++++.|...|. ++++++.+.-....+..+-+..-.+              -..+.+++.
T Consensus        20 ~~s~VlIi----G~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~   94 (197)
T cd01492          20 RSARILLI----GLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVS   94 (197)
T ss_pred             HhCcEEEE----cCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEE
Confidence            46789999    7666 99999999999996 6888887643332222211111011              012233322


Q ss_pred             --EcCh-hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          138 --WGDP-AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       138 --~~D~-~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                        .... +...+.+.+  +|+||.+.. +......+-++|++.++ .||+.++.+.||.
T Consensus        95 ~~~~~~~~~~~~~~~~--~dvVi~~~~-~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~  149 (197)
T cd01492          95 VDTDDISEKPEEFFSQ--FDVVVATEL-SRAELVKINELCRKLGV-KFYATGVHGLFGF  149 (197)
T ss_pred             EEecCccccHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEecCCEEE
Confidence              2221 223445555  499998755 56667777889999887 6888887776664

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.76  E-value=0.0076  Score=56.60  Aligned_cols=90  Identities=19%  Similarity=0.254  Sum_probs=57.2

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEE---EEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVT---IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~---~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +|+|+    ||||++|..+++.|.+++|.+.   .+.+.......+.           ..+.+....|.+ . ..+.+  
T Consensus         1 ~VaIv----GAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-----------~~~~~~~~~~~~-~-~~~~~--   61 (339)
T TIGR01296         1 NVAIV----GATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-----------FKGKELEVNEAK-I-ESFEG--   61 (339)
T ss_pred             CEEEE----cCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-----------eCCeeEEEEeCC-h-HHhcC--
Confidence            58999    9999999999999999888644   4446543332211           113344444443 1 23444  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +|+|+.+++..  ....++..+.+.|+ ++|=.|+
T Consensus        62 ~D~v~~a~g~~--~s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        62 IDIALFSAGGS--VSKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             CCEEEECCCHH--HHHHHHHHHHHCCC-EEEECCH
Confidence            59999999855  44555666666776 5665555

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.71  E-value=0.032  Score=49.37  Aligned_cols=108  Identities=18%  Similarity=0.300  Sum_probs=67.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCC--------c-------ccceecCCCeE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN--------R-------FNEIVSAGGKT  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~--------~-------~~~l~~~~~~~  136 (349)
                      +..+|+|+     |.|.+|+++++.|...|. ++++++.+.-....+..+...        +       +.++ .+.+++
T Consensus        10 ~~~~VlVv-----G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i-nP~~~V   83 (231)
T cd00755          10 RNAHVAVV-----GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDI-NPECEV   83 (231)
T ss_pred             hCCCEEEE-----CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHH-CCCcEE
Confidence            46789999     789999999999999996 788888654222222111100        0       0011 223333


Q ss_pred             EEcC----hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          137 VWGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       137 ~~~D----~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      ...+    ++.+..++.. ++|+||.+.. ++.....+.++|++.++ .||...+.+
T Consensus        84 ~~~~~~i~~~~~~~l~~~-~~D~VvdaiD-~~~~k~~L~~~c~~~~i-p~I~s~g~g  137 (231)
T cd00755          84 DAVEEFLTPDNSEDLLGG-DPDFVVDAID-SIRAKVALIAYCRKRKI-PVISSMGAG  137 (231)
T ss_pred             EEeeeecCHhHHHHHhcC-CCCEEEEcCC-CHHHHHHHHHHHHHhCC-CEEEEeCCc
Confidence            3222    4556666633 3799999876 45666778899999886 566554433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.70  E-value=0.0019  Score=60.97  Aligned_cols=35  Identities=26%  Similarity=0.433  Sum_probs=31.1

Q ss_pred             cceEEEEEecCCCcccchHHH--HHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFY--LAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~--l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .+|++|||    |+++.+|.+  ++++| +.|.+|.++++..
T Consensus        40 ggK~aLVT----GaSsGIGlA~~IA~al-~~GA~Vi~v~~~~   76 (398)
T PRK13656         40 GPKKVLVI----GASSGYGLASRIAAAF-GAGADTLGVFFEK   76 (398)
T ss_pred             CCCEEEEE----CCCchHhHHHHHHHHH-HcCCeEEEEecCc
Confidence            36899999    999999999  89999 9999999998643

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.69  E-value=0.02  Score=51.02  Aligned_cols=113  Identities=16%  Similarity=0.206  Sum_probs=71.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      -+..+|+|+     |.|.+|..+++.|...|. ++++++++.-....+..+.+....++              ..+.+++
T Consensus        22 L~~~~Vlvv-----G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i   96 (240)
T TIGR02355        22 LKASRVLIV-----GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAI   96 (240)
T ss_pred             HhCCcEEEE-----CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEE
Confidence            345789999     789999999999999995 78888877644333322211100011              1233333


Q ss_pred             EEc----ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       137 ~~~----D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      ...    +.+.+.+++.+.  |+||.+.. +...-..+-++|++.++ .||+-+..+.+|.
T Consensus        97 ~~~~~~i~~~~~~~~~~~~--DlVvd~~D-~~~~r~~ln~~~~~~~i-p~v~~~~~g~~G~  153 (240)
T TIGR02355        97 NPINAKLDDAELAALIAEH--DIVVDCTD-NVEVRNQLNRQCFAAKV-PLVSGAAIRMEGQ  153 (240)
T ss_pred             EEEeccCCHHHHHHHhhcC--CEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEEecccEeE
Confidence            222    245567777775  99999886 45555556678888886 6887766655553

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08328 hypothetical protein; Provisional

Probab=96.67  E-value=0.02  Score=50.72  Aligned_cols=112  Identities=20%  Similarity=0.315  Sum_probs=71.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccc---------------eecCCCeE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE---------------IVSAGGKT  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~---------------l~~~~~~~  136 (349)
                      +..+|+|+     |.|.+|.++++.|...|. ++++++.+.-....+..+......+               ...+++++
T Consensus        26 ~~~~VlIi-----G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v  100 (231)
T PRK08328         26 KKAKVAVV-----GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKI  100 (231)
T ss_pred             hCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEE
Confidence            46789999     788999999999999995 6888887653333222111100000               01223333


Q ss_pred             E--Ec--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          137 V--WG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       137 ~--~~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      .  ..  +.+.+.+++++.  |+||.+... ...-..+-++|++.++ .+|+-+..+.||.
T Consensus       101 ~~~~~~~~~~~~~~~l~~~--D~Vid~~d~-~~~r~~l~~~~~~~~i-p~i~g~~~g~~G~  157 (231)
T PRK08328        101 ETFVGRLSEENIDEVLKGV--DVIVDCLDN-FETRYLLDDYAHKKGI-PLVHGAVEGTYGQ  157 (231)
T ss_pred             EEEeccCCHHHHHHHHhcC--CEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEeeccCEEE
Confidence            2  22  245566777765  999998775 4444445567888885 6888887777765

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.62  E-value=0.024  Score=50.68  Aligned_cols=112  Identities=14%  Similarity=0.236  Sum_probs=69.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCC--------ccc----ce--ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN--------RFN----EI--VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~--------~~~----~l--~~~~~~~  136 (349)
                      -...+|+|+    |+ |-+|..+++.|...|. ++++++.+.-....+..+.+.        +..    .+  ..+.+++
T Consensus        30 L~~~~Vlii----G~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i  104 (245)
T PRK05690         30 LKAARVLVV----GL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAI  104 (245)
T ss_pred             hcCCeEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEE
Confidence            356799999    66 9999999999999995 788888764333222211110        100    00  1223333


Q ss_pred             --EEc--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 --VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 --~~~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                        +..  +.+.+.+++.++  |+||.+.. +...-..+-++|++.++ .||+.+..+.+|
T Consensus       105 ~~~~~~i~~~~~~~~~~~~--DiVi~~~D-~~~~r~~ln~~~~~~~i-p~v~~~~~g~~G  160 (245)
T PRK05690        105 ETINARLDDDELAALIAGH--DLVLDCTD-NVATRNQLNRACFAAKK-PLVSGAAIRMEG  160 (245)
T ss_pred             EEEeccCCHHHHHHHHhcC--CEEEecCC-CHHHHHHHHHHHHHhCC-EEEEeeeccCCc
Confidence              222  245566677765  99999875 55555557778888885 677766555444

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.62  E-value=0.04  Score=49.82  Aligned_cols=108  Identities=16%  Similarity=0.316  Sum_probs=68.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCC---------------cccceecCCCeE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGKT  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~---------------~~~~l~~~~~~~  136 (349)
                      ...+|+|+     |.|.+|+++++.|...| -++++++.+.-....+..+...               ++.++ .+.+++
T Consensus        29 ~~s~VlVv-----G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I-NP~~~V  102 (268)
T PRK15116         29 ADAHICVV-----GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQI-NPECRV  102 (268)
T ss_pred             cCCCEEEE-----CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhH-CCCcEE
Confidence            46789999     78999999999999999 5899998765333222211100               00011 233333


Q ss_pred             EEc----ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       137 ~~~----D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      ...    +++...+++.. ++|+||.+.. ++..-..+.++|++.++ .||....++
T Consensus       103 ~~i~~~i~~e~~~~ll~~-~~D~VIdaiD-~~~~k~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116        103 TVVDDFITPDNVAEYMSA-GFSYVIDAID-SVRPKAALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             EEEecccChhhHHHHhcC-CCCEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEECCcc
Confidence            222    24556666632 3699999887 45556678889999886 677665544

>PLN02775 Probable dihydrodipicolinate reductase

Probab=96.58  E-value=0.031  Score=50.72  Aligned_cols=96  Identities=18%  Similarity=0.242  Sum_probs=61.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~-  151 (349)
                      +..+|+|.    |++|.+|+.+++.+++.+.++++..-.......+.       -++...++.+.  .+.++++++... 
T Consensus        10 ~~i~V~V~----Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~-------~~~~g~~v~~~--~~~dl~~~l~~~~   76 (286)
T PLN02775         10 SAIPIMVN----GCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVT-------VEVCGVEVRLV--GPSEREAVLSSVK   76 (286)
T ss_pred             CCCeEEEE----CCCChHHHHHHHHHhcCCCEEEEEecccccccccc-------ceeccceeeee--cCccHHHHHHHhh
Confidence            44699999    99999999999999998899777543222111110       02221123322  234555555333 


Q ss_pred             --Ccc-EEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          152 --TFD-VVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       152 --~~d-~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        .+| ++|++.-  .+.+...++.|.+.|+.-+|
T Consensus        77 ~~~~~~VvIDFT~--P~a~~~~~~~~~~~g~~~Vv  109 (286)
T PLN02775         77 AEYPNLIVVDYTL--PDAVNDNAELYCKNGLPFVM  109 (286)
T ss_pred             ccCCCEEEEECCC--hHHHHHHHHHHHHCCCCEEE
Confidence              588 8999876  45677888999999974333

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.56  E-value=0.02  Score=51.62  Aligned_cols=86  Identities=15%  Similarity=0.129  Sum_probs=56.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEc-CCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++||.|+    |++|.+|+.+++.+.+. +.+++++.. +.+.....           ...++.    ..+++++++.+ 
T Consensus         1 ~mkV~Ii----G~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------~~~~i~----~~~dl~~ll~~-   60 (257)
T PRK00048          1 MIKVAVA----GASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------GALGVA----ITDDLEAVLAD-   60 (257)
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------CCCCcc----ccCCHHHhccC-
Confidence            4689999    99999999999988864 688777554 43322211           011221    23556666653 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                       +|+||+++..+.  ...++..|.++|+ ++|
T Consensus        61 -~DvVid~t~p~~--~~~~~~~al~~G~-~vv   88 (257)
T PRK00048         61 -ADVLIDFTTPEA--TLENLEFALEHGK-PLV   88 (257)
T ss_pred             -CCEEEECCCHHH--HHHHHHHHHHcCC-CEE
Confidence             699999986443  4677777878886 555

>PRK08223 hypothetical protein; Validated

Probab=96.56  E-value=0.028  Score=51.12  Aligned_cols=112  Identities=18%  Similarity=0.139  Sum_probs=70.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~~  137 (349)
                      ...+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+......++              ..+.+++.
T Consensus        26 ~~s~VlIv-----G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~  100 (287)
T PRK08223         26 RNSRVAIA-----GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR  100 (287)
T ss_pred             hcCCEEEE-----CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence            45789999     688999999999999995 68888876533332221111111111              12344433


Q ss_pred             Ec----ChhhHHhhhcCCCccEEEeCCCCC-hhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          138 WG----DPAEVGNVVGGVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       138 ~~----D~~~l~~~~~~~~~d~Vi~~a~~~-~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ..    +.+.+.+++.++  |+||++.... +..-..+-++|++.++ .||+.+..+..|
T Consensus       101 ~~~~~l~~~n~~~ll~~~--DlVvD~~D~~~~~~r~~ln~~c~~~~i-P~V~~~~~g~~g  157 (287)
T PRK08223        101 AFPEGIGKENADAFLDGV--DVYVDGLDFFEFDARRLVFAACQQRGI-PALTAAPLGMGT  157 (287)
T ss_pred             EEecccCccCHHHHHhCC--CEEEECCCCCcHHHHHHHHHHHHHcCC-CEEEEeccCCeE
Confidence            22    256677788775  9999776542 3555556678888886 688776554333

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.49  E-value=0.013  Score=57.33  Aligned_cols=98  Identities=24%  Similarity=0.311  Sum_probs=64.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~~~  149 (349)
                      .+++|+|+    |+ |.+|+.+++.|.+.|++|++++++++....+...         ..++.++.||.   +.+.++--
T Consensus       230 ~~~~iiIi----G~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~---------~~~~~~i~gd~~~~~~L~~~~~  295 (453)
T PRK09496        230 PVKRVMIV----GG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE---------LPNTLVLHGDGTDQELLEEEGI  295 (453)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---------CCCCeEEECCCCCHHHHHhcCC
Confidence            46889999    65 9999999999999999999999987544321110         12567788884   44433321


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                       .+.|+||-+...+ .....+...+++.+.+++|...
T Consensus       296 -~~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~ii~~~  330 (453)
T PRK09496        296 -DEADAFIALTNDD-EANILSSLLAKRLGAKKVIALV  330 (453)
T ss_pred             -ccCCEEEECCCCc-HHHHHHHHHHHHhCCCeEEEEE
Confidence             1368888776644 2223344466777877766544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.48  E-value=0.012  Score=51.01  Aligned_cols=36  Identities=22%  Similarity=0.254  Sum_probs=28.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      +.+-+|||    |++-.||..+++.+.+++-+.....+..
T Consensus         5 ~r~villT----GaSrgiG~~~v~~i~aed~e~~r~g~~r   40 (253)
T KOG1204|consen    5 MRKVILLT----GASRGIGTGSVATILAEDDEALRYGVAR   40 (253)
T ss_pred             cceEEEEe----cCCCCccHHHHHHHHhcchHHHHHhhhc
Confidence            45678999    9999999999999999987755555443

>PRK04148 hypothetical protein; Provisional

Probab=96.45  E-value=0.011  Score=47.45  Aligned_cols=91  Identities=19%  Similarity=0.237  Sum_probs=64.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhH-HhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV-GNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l-~~~~~~~  151 (349)
                      ++++|+++     |.| .|..+++.|.+.|++|++++.+++..+.           ....+++++.+|.-+- -++-+++
T Consensus        16 ~~~kileI-----G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~-----------a~~~~~~~v~dDlf~p~~~~y~~a   78 (134)
T PRK04148         16 KNKKIVEL-----GIG-FYFKVAKKLKESGFDVIVIDINEKAVEK-----------AKKLGLNAFVDDLFNPNLEIYKNA   78 (134)
T ss_pred             cCCEEEEE-----Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHH-----------HHHhCCeEEECcCCCCCHHHHhcC
Confidence            35789999     677 9999999999999999999998854321           2223567777773222 2223333


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        |.|+.. -...+.+..+++.|++.++.-+|
T Consensus        79 --~liysi-rpp~el~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         79 --KLIYSI-RPPRDLQPFILELAKKINVPLII  107 (134)
T ss_pred             --CEEEEe-CCCHHHHHHHHHHHHHcCCCEEE
Confidence              766654 33567888999999999986555

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.43  E-value=0.035  Score=52.17  Aligned_cols=94  Identities=18%  Similarity=0.201  Sum_probs=56.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +.++|.|+    ||||++|..+++.|.+++|   ++..+.........+.        .   .+.++...+.+ . ..+.
T Consensus         6 ~~~kVaVv----GAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~--------~---~~~~~~v~~~~-~-~~~~   68 (344)
T PLN02383          6 NGPSVAIV----GVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVT--------F---EGRDYTVEELT-E-DSFD   68 (344)
T ss_pred             CCCeEEEE----cCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeee--------e---cCceeEEEeCC-H-HHHc
Confidence            45789999    9999999999999998887   4444443322111110        0   12222222221 1 2234


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +  +|+|+.+++..  ....++..+.+.|+ ++|=.|+.
T Consensus        69 ~--~D~vf~a~p~~--~s~~~~~~~~~~g~-~VIDlS~~  102 (344)
T PLN02383         69 G--VDIALFSAGGS--ISKKFGPIAVDKGA-VVVDNSSA  102 (344)
T ss_pred             C--CCEEEECCCcH--HHHHHHHHHHhCCC-EEEECCch
Confidence            4  59999888755  44555655655674 67767763

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.40  E-value=0.042  Score=43.10  Aligned_cols=102  Identities=20%  Similarity=0.187  Sum_probs=62.4

Q ss_pred             eEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+|.|+    |++   +..|..+++.|.+.|++|+.+.-+.+...                |.+.    ..++.+.  -.
T Consensus         1 ksiAVv----GaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~----------------G~~~----y~sl~e~--p~   54 (116)
T PF13380_consen    1 KSIAVV----GASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL----------------GIKC----YPSLAEI--PE   54 (116)
T ss_dssp             -EEEEE----T--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET----------------TEE-----BSSGGGC--SS
T ss_pred             CEEEEE----cccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC----------------cEEe----eccccCC--CC
Confidence            579999    987   77899999999999999998865442221                1111    2333331  23


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                      .+|.++-+..  -..+..+++.|.+.|++.+++.++.                     ....+.+++++.|+++
T Consensus        55 ~iDlavv~~~--~~~~~~~v~~~~~~g~~~v~~~~g~---------------------~~~~~~~~a~~~gi~v  105 (116)
T PF13380_consen   55 PIDLAVVCVP--PDKVPEIVDEAAALGVKAVWLQPGA---------------------ESEELIEAAREAGIRV  105 (116)
T ss_dssp             T-SEEEE-S---HHHHHHHHHHHHHHT-SEEEE-TTS-----------------------HHHHHHHHHTT-EE
T ss_pred             CCCEEEEEcC--HHHHHHHHHHHHHcCCCEEEEEcch---------------------HHHHHHHHHHHcCCEE
Confidence            4688877654  5567788888888899999988860                     2336677788877754

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.39  E-value=0.0082  Score=55.01  Aligned_cols=71  Identities=14%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+    | .|.+|+.+++.|...|.+|++..|+.+.....           ...+.+.+  +.+++.+.+.+. 
T Consensus       150 ~gk~v~Ii----G-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-----------~~~g~~~~--~~~~l~~~l~~a-  210 (287)
T TIGR02853       150 HGSNVMVL----G-FGRTGMTIARTFSALGARVFVGARSSADLARI-----------TEMGLIPF--PLNKLEEKVAEI-  210 (287)
T ss_pred             CCCEEEEE----c-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHCCCeee--cHHHHHHHhccC-
Confidence            46899999    5 58899999999999999999999986432211           11122221  345667777665 


Q ss_pred             ccEEEeCCCCC
Q 018900          153 FDVVLDNNGKN  163 (349)
Q Consensus       153 ~d~Vi~~a~~~  163 (349)
                       |+||++....
T Consensus       211 -DiVint~P~~  220 (287)
T TIGR02853       211 -DIVINTIPAL  220 (287)
T ss_pred             -CEEEECCChH
Confidence             9999877643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.37  E-value=0.018  Score=50.42  Aligned_cols=113  Identities=19%  Similarity=0.345  Sum_probs=78.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCc---c----cceecCCCeEEE---cC----
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---F----NEIVSAGGKTVW---GD----  140 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~---~----~~l~~~~~~~~~---~D----  140 (349)
                      |+|-++     |-|..|..++++|++.||+|++.+++++..+.+.......   .    ..+..++.-++.   +|    
T Consensus         1 M~iGmi-----GLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~   75 (300)
T COG1023           1 MQIGMI-----GLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDA   75 (300)
T ss_pred             Ccceee-----ccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHH
Confidence            356677     7899999999999999999999999875554443222111   1    123334433332   23    


Q ss_pred             -hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc-cccCCCC
Q 018900          141 -PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA-GIYKPAD  195 (349)
Q Consensus       141 -~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~-~vy~~~~  195 (349)
                       .+++...+..-  |+||.-...|+.-..+-.+.+++.|+ +|+=+++. ++.|...
T Consensus        76 vi~~la~~L~~G--DivIDGGNS~y~Ds~rr~~~l~~kgi-~flD~GTSGG~~G~~~  129 (300)
T COG1023          76 VIDDLAPLLSAG--DIVIDGGNSNYKDSLRRAKLLAEKGI-HFLDVGTSGGVWGAER  129 (300)
T ss_pred             HHHHHHhhcCCC--CEEEECCccchHHHHHHHHHHHhcCC-eEEeccCCCCchhhhc
Confidence             56677777665  99999888888888888888888888 78877764 4655443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.35  E-value=0.037  Score=52.32  Aligned_cols=112  Identities=18%  Similarity=0.204  Sum_probs=69.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      -+..+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+.+....++              ..+.+++
T Consensus        26 L~~~~Vliv-----G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v  100 (355)
T PRK05597         26 LFDAKVAVI-----GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKV  100 (355)
T ss_pred             HhCCeEEEE-----CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEE
Confidence            356799999     569999999999999996 68888876533333322211110100              1233433


Q ss_pred             EE--c--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 VW--G--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 ~~--~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ..  .  +.+...+++.++  |+||.+.. |+..-..+-++|++.++ .||+.+..+.+|
T Consensus       101 ~~~~~~i~~~~~~~~~~~~--DvVvd~~d-~~~~r~~~n~~c~~~~i-p~v~~~~~g~~g  156 (355)
T PRK05597        101 TVSVRRLTWSNALDELRDA--DVILDGSD-NFDTRHLASWAAARLGI-PHVWASILGFDA  156 (355)
T ss_pred             EEEEeecCHHHHHHHHhCC--CEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEEecCeE
Confidence            22  2  245566677765  99999886 44444445568888886 688877655544

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.31  E-value=0.047  Score=48.61  Aligned_cols=95  Identities=16%  Similarity=0.094  Sum_probs=56.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEE-EEEcCCCCcccCCCCCCCcccceecC-CCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVT-IMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~-~l~R~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D~~~l~~~~~  149 (349)
                      +|+||.|.    |++|.+|+.+++.+.+.+ +++. +++|........      ...++... .+.+...  +++.  +.
T Consensus         1 ~~iki~V~----Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~------d~ge~~g~~~~gv~v~--~~~~--~~   66 (266)
T COG0289           1 SMIKVAVA----GASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGS------DAGELAGLGLLGVPVT--DDLL--LV   66 (266)
T ss_pred             CCceEEEE----cCCChHHHHHHHHHhcCCCceEEEEEecCCcccccc------chhhhccccccCceee--cchh--hc
Confidence            47899999    999999999999999875 5644 445554322100      00011100 0111111  1122  22


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ...+|++|++...  +++...++.|.+.++..+|
T Consensus        67 ~~~~DV~IDFT~P--~~~~~~l~~~~~~~~~lVI   98 (266)
T COG0289          67 KADADVLIDFTTP--EATLENLEFALEHGKPLVI   98 (266)
T ss_pred             ccCCCEEEECCCc--hhhHHHHHHHHHcCCCeEE
Confidence            2346999999885  6778888888888864444

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.30  E-value=0.023  Score=53.61  Aligned_cols=99  Identities=18%  Similarity=0.107  Sum_probs=59.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecC-CCeEEEcChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++|.|+    ||||++|..+++.|.+. +++++.+ ++.....+.+..    .+..+... ...+...|   .+++..+ 
T Consensus         1 ~kVaIi----GATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~----~~~~l~~~~~~~~~~~~---~~~~~~~-   68 (346)
T TIGR01850         1 IKVAIV----GASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSE----VHPHLRGLVDLNLEPID---EEEIAED-   68 (346)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHH----hCccccccCCceeecCC---HHHhhcC-
Confidence            489999    99999999999999987 5688855 443322211110    01111100 11111112   2333333 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                       +|+|+.+.+..  ....++..+.+.| +++|=.|+..
T Consensus        69 -~DvVf~alP~~--~s~~~~~~~~~~G-~~VIDlS~~f  102 (346)
T TIGR01850        69 -ADVVFLALPHG--VSAELAPELLAAG-VKVIDLSADF  102 (346)
T ss_pred             -CCEEEECCCch--HHHHHHHHHHhCC-CEEEeCChhh
Confidence             59999888744  5567777776777 5888888743

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.28  E-value=0.035  Score=48.69  Aligned_cols=114  Identities=18%  Similarity=0.257  Sum_probs=72.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCC--------CCCCCccc---c---eecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMK--------KPPFNRFN---E---IVSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~--------~~~~~~~~---~---l~~~~~~~~  137 (349)
                      +..+|+|+     |-|.+|++.+++|...|. ++++++-+.-....+-        .....+..   +   .-.+..++.
T Consensus        29 ~~~~V~Vv-----GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~  103 (263)
T COG1179          29 KQAHVCVV-----GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVT  103 (263)
T ss_pred             hhCcEEEE-----ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEe
Confidence            35689999     688899999999999986 5777765432111110        00000000   0   112334443


Q ss_pred             EcC----hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC
Q 018900          138 WGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       138 ~~D----~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ..+    ++.+++++.. .+|+||++.. ++..-..|+.+|++.++ .  ++||+|.-+..++
T Consensus       104 ~~~~f~t~en~~~~~~~-~~DyvIDaiD-~v~~Kv~Li~~c~~~ki-~--vIss~Gag~k~DP  161 (263)
T COG1179         104 AINDFITEENLEDLLSK-GFDYVIDAID-SVRAKVALIAYCRRNKI-P--VISSMGAGGKLDP  161 (263)
T ss_pred             ehHhhhCHhHHHHHhcC-CCCEEEEchh-hhHHHHHHHHHHHHcCC-C--EEeeccccCCCCC
Confidence            333    7788888776 6899999776 67777889999999887 4  4577776555443

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.25  E-value=0.0046  Score=57.49  Aligned_cols=104  Identities=13%  Similarity=0.123  Sum_probs=64.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC---------CCeEEEcChhhH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA---------GGKTVWGDPAEV  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~D~~~l  144 (349)
                      .++|.|+     |.|.+|..++..|+..|++|++.++.++..+.........+..+...         .++.    ..++
T Consensus         7 i~~VaVI-----GaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~----~~~l   77 (321)
T PRK07066          7 IKTFAAI-----GSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF----VATI   77 (321)
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee----cCCH
Confidence            4689999     67999999999999999999999998754332111000000011101         1111    2346


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEeccc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSA  188 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~Ss~  188 (349)
                      ++++.++  |+|+-+...+++.-+.+.+.+.+. +-..+|-.||.
T Consensus        78 ~~av~~a--DlViEavpE~l~vK~~lf~~l~~~~~~~aIlaSnTS  120 (321)
T PRK07066         78 EACVADA--DFIQESAPEREALKLELHERISRAAKPDAIIASSTS  120 (321)
T ss_pred             HHHhcCC--CEEEECCcCCHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence            6777776  999999998888777777655443 32334444443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.24  E-value=0.027  Score=52.52  Aligned_cols=96  Identities=13%  Similarity=0.159  Sum_probs=59.0

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcCCCC--cccCCCCCCCcccceecCC----CeEEEcChh
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDEN--SDKMKKPPFNRFNEIVSAG----GKTVWGDPA  142 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~----~~~~~~D~~  142 (349)
                      ||.|+    |++|.+|..++..|..++.       +++.++++++.  +...       ..++.+..    ...+..  .
T Consensus         1 ~V~Ii----GaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~-------~~Dl~d~~~~~~~~~~~~--~   67 (324)
T TIGR01758         1 RVVVT----GAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGV-------VMELMDCAFPLLDGVVPT--H   67 (324)
T ss_pred             CEEEE----CCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccccccee-------EeehhcccchhcCceecc--C
Confidence            68999    9999999999999987543       69999986532  2111       01111111    011111  1


Q ss_pred             hHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC-C-cEEEEec
Q 018900          143 EVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-V-KQFLFIS  186 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g-v-~~~i~~S  186 (349)
                      +..+.+.+.  |+||++||.              |+.-.+.+...+++.. - ..+|.+|
T Consensus        68 ~~~~~~~~a--DiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        68 DPAVAFTDV--DVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             ChHHHhCCC--CEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            234556665  999999994              3445777777777763 3 4555555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.24  E-value=0.042  Score=50.17  Aligned_cols=112  Identities=20%  Similarity=0.304  Sum_probs=72.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~~  137 (349)
                      +..+|||+     |.|.+|..+++.|...|. +|++++.+.-....+..+-+-+-.++              ..+.+++.
T Consensus        18 ~~s~VLIv-----G~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~   92 (286)
T cd01491          18 QKSNVLIS-----GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVT   92 (286)
T ss_pred             hcCcEEEE-----cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEE
Confidence            45689999     678899999999999996 68888876533333322211110110              12334433


Q ss_pred             EcChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       138 ~~D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      ..+.....+.+.+  +|+||.+.. ++.....+-++|++.++ .||...+.+.+|.
T Consensus        93 ~~~~~~~~~~l~~--fdvVV~~~~-~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~  144 (286)
T cd01491          93 VSTGPLTTDELLK--FQVVVLTDA-SLEDQLKINEFCHSPGI-KFISADTRGLFGS  144 (286)
T ss_pred             EEeccCCHHHHhc--CCEEEEecC-CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence            3322222345555  499988865 77777888889999886 7999888887775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.23  E-value=0.022  Score=55.59  Aligned_cols=89  Identities=28%  Similarity=0.433  Sum_probs=59.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-hhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~l~~~~~~~  151 (349)
                      ++++|+|+    |++| +|..+++.|.++|++|++.++.......       ...++...++++..+. ..++   +.. 
T Consensus         4 ~~k~v~v~----G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~-------~~~~l~~~g~~~~~~~~~~~~---~~~-   67 (447)
T PRK02472          4 QNKKVLVL----GLAK-SGYAAAKLLHKLGANVTVNDGKPFSENP-------EAQELLEEGIKVICGSHPLEL---LDE-   67 (447)
T ss_pred             CCCEEEEE----eeCH-HHHHHHHHHHHCCCEEEEEcCCCccchh-------HHHHHHhcCCEEEeCCCCHHH---hcC-
Confidence            46789999    9888 9999999999999999999876532211       1123334466666543 3322   222 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      .+|.||..+|+..+  ..++++|++.|+
T Consensus        68 ~~d~vV~s~gi~~~--~~~~~~a~~~~i   93 (447)
T PRK02472         68 DFDLMVKNPGIPYT--NPMVEKALEKGI   93 (447)
T ss_pred             cCCEEEECCCCCCC--CHHHHHHHHCCC
Confidence            26999999986543  356667776664

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.22  E-value=0.022  Score=52.72  Aligned_cols=96  Identities=19%  Similarity=0.230  Sum_probs=61.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC-C
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-V  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~-~  151 (349)
                      ...+|||+    ||+|.+|..+++.+...|.+|++++|+.+....+           ...+.+.+. +.+++.+.+.. .
T Consensus       162 ~~~~vlI~----ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~  225 (332)
T cd08259         162 KGDTVLVT----GAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-----------KELGADYVI-DGSKFSEDVKKLG  225 (332)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-----------HHcCCcEEE-ecHHHHHHHHhcc
Confidence            45789999    9999999999999999999999999876433211           111222221 11112222221 1


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ++|.|+++++..  .....++.++..|  +||.++..
T Consensus       226 ~~d~v~~~~g~~--~~~~~~~~~~~~g--~~v~~g~~  258 (332)
T cd08259         226 GADVVIELVGSP--TIEESLRSLNKGG--RLVLIGNV  258 (332)
T ss_pred             CCCEEEECCChH--HHHHHHHHhhcCC--EEEEEcCC
Confidence            479999998843  2455566665544  68877753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.21  E-value=0.0028  Score=51.67  Aligned_cols=98  Identities=18%  Similarity=0.295  Sum_probs=60.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccce---ecCCCeEEEcChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D~~~l~~~~~  149 (349)
                      |||.|+    |++|.+|.+++..|...+  .+++.++++++.......    .+.+.   ......+..++++    .++
T Consensus         1 ~KV~Ii----Ga~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~----Dl~~~~~~~~~~~~i~~~~~~----~~~   68 (141)
T PF00056_consen    1 MKVAII----GAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEAL----DLSHASAPLPSPVRITSGDYE----ALK   68 (141)
T ss_dssp             SEEEEE----STTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH----HHHHHHHGSTEEEEEEESSGG----GGT
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeeh----hhhhhhhhccccccccccccc----ccc
Confidence            589999    999999999999999886  589999998643321100    00000   0011222333333    344


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                      +.  |+||-++|.              |....+.+.+.+++.+-+ .++.+|
T Consensus        69 ~a--Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   69 DA--DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             TE--SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             cc--cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            44  999999984              445567777777776533 455444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.19  E-value=0.019  Score=53.16  Aligned_cols=100  Identities=23%  Similarity=0.371  Sum_probs=62.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +||.|+    | +|.+|+.++..|+..|  ++|++++|+.+....+........ ...........++.++    +.+. 
T Consensus         1 ~kI~II----G-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~-~~~~~~~~i~~~~~~~----l~~a-   69 (306)
T cd05291           1 RKVVII----G-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDAL-AFLPSPVKIKAGDYSD----CKDA-   69 (306)
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHh-hccCCCeEEEcCCHHH----hCCC-
Confidence            479999    7 5999999999999998  689999998766543321100000 0001122333334332    3454 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                       |+||.++|.              |..-.+.+.+.+++.+- ..+|.+|
T Consensus        70 -DIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          70 -DIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             -CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence             999999994              44557777777777653 3455555

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.16  E-value=0.026  Score=43.94  Aligned_cols=89  Identities=20%  Similarity=0.266  Sum_probs=61.2

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhhhcCCCc
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNVVGGVTF  153 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~~~~~~~  153 (349)
                      |+|.     |.|.+|..+++.|.+.+.+|++++++++..           ..+...++.++.||.   +.+.++-- .+.
T Consensus         1 vvI~-----G~g~~~~~i~~~L~~~~~~vvvid~d~~~~-----------~~~~~~~~~~i~gd~~~~~~l~~a~i-~~a   63 (116)
T PF02254_consen    1 VVII-----GYGRIGREIAEQLKEGGIDVVVIDRDPERV-----------EELREEGVEVIYGDATDPEVLERAGI-EKA   63 (116)
T ss_dssp             EEEE-----S-SHHHHHHHHHHHHTTSEEEEEESSHHHH-----------HHHHHTTSEEEES-TTSHHHHHHTTG-GCE
T ss_pred             eEEE-----cCCHHHHHHHHHHHhCCCEEEEEECCcHHH-----------HHHHhcccccccccchhhhHHhhcCc-ccc
Confidence            6788     568999999999999877999999987543           344556788999984   44544421 135


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHh-CCCcEEE
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKS-SGVKQFL  183 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~-~gv~~~i  183 (349)
                      +.|+-+...+ .....++..+++ .+..+++
T Consensus        64 ~~vv~~~~~d-~~n~~~~~~~r~~~~~~~ii   93 (116)
T PF02254_consen   64 DAVVILTDDD-EENLLIALLARELNPDIRII   93 (116)
T ss_dssp             SEEEEESSSH-HHHHHHHHHHHHHTTTSEEE
T ss_pred             CEEEEccCCH-HHHHHHHHHHHHHCCCCeEE
Confidence            8888777744 555666677777 4445655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.16  E-value=0.051  Score=52.64  Aligned_cols=103  Identities=9%  Similarity=-0.010  Sum_probs=64.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-------CC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-------GH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-------g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l  144 (349)
                      .-||.|+    |++|.+|.+++..|+..       |.  +++.++++++.+........+....+. .++.+..+|.   
T Consensus       100 ~~KV~II----GAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~-~~v~i~~~~y---  171 (444)
T PLN00112        100 LINVAVS----GAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLL-REVSIGIDPY---  171 (444)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhc-CceEEecCCH---
Confidence            4589999    99999999999999887       64  788889887665432211100000011 1222222333   


Q ss_pred             HhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHh-CC-CcEEEEecc
Q 018900          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKS-SG-VKQFLFISS  187 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~-~g-v~~~i~~Ss  187 (349)
                       +.+++.  |+||-.+|.              |....+.+...+++ ++ -..+|.+|-
T Consensus       172 -e~~kda--DiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        172 -EVFQDA--EWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             -HHhCcC--CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence             334454  999999994              45567788888877 44 335665553

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.15  E-value=0.014  Score=62.06  Aligned_cols=92  Identities=17%  Similarity=0.167  Sum_probs=60.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhC-CCe-------------EEEEEcCCCCcccCCCCCCCcccceecCCC---
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHE-------------VTIMTVGDENSDKMKKPPFNRFNEIVSAGG---  134 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~-------------V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~---  134 (349)
                      ..+++|+|+    | .|++|+.+++.|.+. +++             |++.+++.+..+++...       +  +++   
T Consensus       567 ~~~~rIlVL----G-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~-------~--~~~~~v  632 (1042)
T PLN02819        567 KKSQNVLIL----G-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG-------I--ENAEAV  632 (1042)
T ss_pred             ccCCcEEEE----C-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh-------c--CCCceE
Confidence            347899999    6 599999999999875 333             77777776544332211       1  133   


Q ss_pred             eEEEcChhhHHhhhcCCCccEEEeCCCC----------------------ChhhHHHHHHHHHhCCC
Q 018900          135 KTVWGDPAEVGNVVGGVTFDVVLDNNGK----------------------NLDAVRPVADWAKSSGV  179 (349)
Q Consensus       135 ~~~~~D~~~l~~~~~~~~~d~Vi~~a~~----------------------~~~~~~~ll~~a~~~gv  179 (349)
                      .++..|.+++.+++.+  +|+||.+...                      ....+..+.+.|+++|+
T Consensus       633 ~lDv~D~e~L~~~v~~--~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV  697 (1042)
T PLN02819        633 QLDVSDSESLLKYVSQ--VDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGI  697 (1042)
T ss_pred             EeecCCHHHHHHhhcC--CCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCC
Confidence            3334467777777666  5999988773                      23456667777777775

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.07  E-value=0.005  Score=56.56  Aligned_cols=35  Identities=20%  Similarity=0.327  Sum_probs=31.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~  112 (349)
                      ++++++|+    |+ |.+|+.++..|.+.|.+ |+++.|+.
T Consensus       125 ~~k~vlI~----GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVI----GA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            46789999    88 89999999999999985 99999986

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.03  E-value=0.039  Score=51.96  Aligned_cols=100  Identities=13%  Similarity=0.172  Sum_probs=55.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCc-ccCCCC-CCCcccceec--CCCeEEEcChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS-DKMKKP-PFNRFNEIVS--AGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~-~~~~~~-~~~~~~~l~~--~~~~~~~~D~~~l~~~~~  149 (349)
                      +||.|+    |++|++|+++++.|.+++ .+|+.+.+...+. ..+... +...+..+..  .++.+...+++    .+.
T Consensus         1 ~kVaIv----GatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   72 (341)
T TIGR00978         1 MRVAVL----GATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----ASK   72 (341)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----Hhc
Confidence            479999    999999999999998876 5888885443222 111110 0000000100  01111111222    233


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +  +|+|+.+...++..  .+.+.+.+.|. ++|-.|+
T Consensus        73 ~--~DvVf~a~p~~~s~--~~~~~~~~~G~-~VIDlsg  105 (341)
T TIGR00978        73 D--VDIVFSALPSEVAE--EVEPKLAEAGK-PVFSNAS  105 (341)
T ss_pred             c--CCEEEEeCCHHHHH--HHHHHHHHCCC-EEEECCh
Confidence            3  59999988866433  34466666787 4555554

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.02  E-value=0.028  Score=53.56  Aligned_cols=37  Identities=38%  Similarity=0.541  Sum_probs=33.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      +.+++|.|+    ||.|.+|..+++.|.+.||+|++.+|+.
T Consensus        96 ~~~~~I~Ii----GG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         96 PDLRPVVIV----GGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cccceEEEE----cCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            356899999    9999999999999999999999999853

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.00  E-value=0.063  Score=51.51  Aligned_cols=112  Identities=16%  Similarity=0.204  Sum_probs=70.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT-  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~-  136 (349)
                      +..+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+.+....++              ..+.+++ 
T Consensus        41 ~~~~Vlvi-----G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~  115 (392)
T PRK07878         41 KNARVLVI-----GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVR  115 (392)
T ss_pred             hcCCEEEE-----CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEE
Confidence            46689999     788999999999999996 68888765433322222111011111              1233443 


Q ss_pred             -EEc--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       137 -~~~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                       ...  +.+...+++.++  |+||.+.. |...-..+-++|++.++ .||+.+..+.+|.
T Consensus       116 ~~~~~i~~~~~~~~~~~~--D~Vvd~~d-~~~~r~~ln~~~~~~~~-p~v~~~~~g~~G~  171 (392)
T PRK07878        116 LHEFRLDPSNAVELFSQY--DLILDGTD-NFATRYLVNDAAVLAGK-PYVWGSIYRFEGQ  171 (392)
T ss_pred             EEeccCChhHHHHHHhcC--CEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCEEE
Confidence             222  244566677765  99999865 45444445568888885 6888877776664

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.99  E-value=0.061  Score=51.33  Aligned_cols=112  Identities=14%  Similarity=0.195  Sum_probs=68.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCC--------ccc----ce--ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN--------RFN----EI--VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~--------~~~----~l--~~~~~~~  136 (349)
                      .+.++|+|+     |.|.+|+++++.|...|. ++++++++.-....+..+.+.        +..    .+  ..+.+++
T Consensus       133 l~~~~Vlvv-----G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v  207 (376)
T PRK08762        133 LLEARVLLI-----GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQV  207 (376)
T ss_pred             HhcCcEEEE-----CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEE
Confidence            356789999     568899999999999997 788888874222222111110        000    01  1123333


Q ss_pred             EE--c--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 VW--G--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 ~~--~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ..  .  +.+.+.+++.+.  |+||++... ...-..+-++|++.++ .||+.+..+.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~--D~Vv~~~d~-~~~r~~ln~~~~~~~i-p~i~~~~~g~~g  263 (376)
T PRK08762        208 EAVQERVTSDNVEALLQDV--DVVVDGADN-FPTRYLLNDACVKLGK-PLVYGAVFRFEG  263 (376)
T ss_pred             EEEeccCChHHHHHHHhCC--CEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence            22  1  244566677665  999998774 4444456678888886 788877655544

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.97  E-value=0.025  Score=47.51  Aligned_cols=56  Identities=29%  Similarity=0.361  Sum_probs=45.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..+++|||+    |+++.+|..+++.|.++|.+|+++.|..                             +++.+.+.+.
T Consensus        42 l~gk~vlVi----G~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~a   88 (168)
T cd01080          42 LAGKKVVVV----GRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQA   88 (168)
T ss_pred             CCCCEEEEE----CCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhC
Confidence            467899999    8877789999999999999999999853                             3455667666


Q ss_pred             CccEEEeCCCC
Q 018900          152 TFDVVLDNNGK  162 (349)
Q Consensus       152 ~~d~Vi~~a~~  162 (349)
                        |+||.+.+.
T Consensus        89 --DiVIsat~~   97 (168)
T cd01080          89 --DIVIVAVGK   97 (168)
T ss_pred             --CEEEEcCCC
Confidence              999988774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.93  E-value=0.023  Score=53.15  Aligned_cols=97  Identities=21%  Similarity=0.255  Sum_probs=62.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE----cC-hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----GD-PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~D-~~~l~~~~  148 (349)
                      +.+|||+    ||+|-+|...++-+...|+.+++++...++.+.+           ...+.+.+.    .| .+.+.++.
T Consensus       143 g~~VLV~----gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~-----------~~lGAd~vi~y~~~~~~~~v~~~t  207 (326)
T COG0604         143 GETVLVH----GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELL-----------KELGADHVINYREEDFVEQVRELT  207 (326)
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-----------HhcCCCEEEcCCcccHHHHHHHHc
Confidence            6899999    9999999999999999997766666655433311           122332222    22 34556666


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      .+.++|+|++..|-..  ....+++++..  .+++.+...+
T Consensus       208 ~g~gvDvv~D~vG~~~--~~~~l~~l~~~--G~lv~ig~~~  244 (326)
T COG0604         208 GGKGVDVVLDTVGGDT--FAASLAALAPG--GRLVSIGALS  244 (326)
T ss_pred             CCCCceEEEECCCHHH--HHHHHHHhccC--CEEEEEecCC
Confidence            6666899999887432  22345555544  4788776543

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=95.90  E-value=0.035  Score=54.30  Aligned_cols=101  Identities=13%  Similarity=0.106  Sum_probs=60.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCe-EEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGK-TVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~-~~~~D~~~l~~~~~  149 (349)
                      |||||||.     |.|.+|..+++++.+.|++|++++...+....-.    ...++..  .+... -...|.+.+.++.+
T Consensus         1 ~~k~iLi~-----g~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~----~~ad~~~~~~~~~~~~~y~d~~~l~~~a~   71 (451)
T PRK08591          1 MFDKILIA-----NRGEIALRIIRACKELGIKTVAVHSTADRDALHV----QLADEAVCIGPAPSKKSYLNIPAIISAAE   71 (451)
T ss_pred             CcceEEEE-----CCCHHHHHHHHHHHHcCCeEEEEcChhhccCCCH----hHCCEEEEeCCCCcccccCCHHHHHHHHH
Confidence            57899999     7899999999999999999999866543211000    0000100  01100 01124556666666


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      ..++|+|+-..+...+.. .+.+.+.+.|+ +++.
T Consensus        72 ~~~id~I~p~~~~~~e~~-~~~~~~e~~gi-~~~g  104 (451)
T PRK08591         72 ITGADAIHPGYGFLSENA-DFAEICEDSGF-TFIG  104 (451)
T ss_pred             HhCCCEEEECCCccccCH-HHHHHHHHCCC-ceEC
Confidence            667899987654222221 45667777785 4443

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.87  E-value=0.062  Score=49.75  Aligned_cols=97  Identities=26%  Similarity=0.265  Sum_probs=62.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEc-ChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWG-DPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~-D~~~l~~~~~  149 (349)
                      |||.|+    |++|.+|..++..|..+|  .+++.++.+  .+...       .-++.+.  ...+... ..+++.+.++
T Consensus         1 ~KI~II----GaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~-------alDL~~~~~~~~i~~~~~~~~~y~~~~   67 (310)
T cd01337           1 VKVAVL----GAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGV-------AADLSHINTPAKVTGYLGPEELKKALK   67 (310)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEecC--cccee-------ehHhHhCCCcceEEEecCCCchHHhcC
Confidence            589999    999999999999998887  489999886  22111       1112211  1222221 2233555666


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                      +.  |+||-+||.              |....+.+.+..++.+-+ .+|.+|
T Consensus        68 da--DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt  117 (310)
T cd01337          68 GA--DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS  117 (310)
T ss_pred             CC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            66  999999993              456677777777776643 455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.87  E-value=0.074  Score=46.46  Aligned_cols=112  Identities=15%  Similarity=0.211  Sum_probs=68.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCC-------Cccc----c--eecCCCeEEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPF-------NRFN----E--IVSAGGKTVW  138 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~-------~~~~----~--l~~~~~~~~~  138 (349)
                      ...+|+|+     |.|-+|..+++.|...|. ++++++.+.-....+..+.+       .+..    .  -..+.+++..
T Consensus        27 ~~~~V~Vi-----G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~  101 (212)
T PRK08644         27 KKAKVGIA-----GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEA  101 (212)
T ss_pred             hCCCEEEE-----CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            46789999     579999999999999996 59999887422222221100       0000    0  0112333322


Q ss_pred             c----ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEeccccccCC
Q 018900          139 G----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP  193 (349)
Q Consensus       139 ~----D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~  193 (349)
                      .    +.+.+.+.+.++  |+||.+. .+...-..+.+.|.+. ++ .+|+.+..+-|+.
T Consensus       102 ~~~~i~~~~~~~~~~~~--DvVI~a~-D~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~  157 (212)
T PRK08644        102 HNEKIDEDNIEELFKDC--DIVVEAF-DNAETKAMLVETVLEHPGK-KLVAASGMAGYGD  157 (212)
T ss_pred             EeeecCHHHHHHHHcCC--CEEEECC-CCHHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence            1    245566677665  9999984 4666666777888887 64 6777765444443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.83  E-value=0.081  Score=50.31  Aligned_cols=112  Identities=16%  Similarity=0.247  Sum_probs=69.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      -+..+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+......++              ..+++++
T Consensus        39 l~~~~Vlii-----G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i  113 (370)
T PRK05600         39 LHNARVLVI-----GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRV  113 (370)
T ss_pred             hcCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCee
Confidence            356789999     688999999999999995 89999886433322222111110111              1123332


Q ss_pred             EEc----ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 ~~~----D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ...    +.+.+.++++++  |+||.+... +..-..+-++|.+.++ .+|+.+..+.+|
T Consensus       114 ~~~~~~i~~~~~~~~~~~~--DlVid~~Dn-~~~r~~in~~~~~~~i-P~v~~~~~g~~G  169 (370)
T PRK05600        114 NALRERLTAENAVELLNGV--DLVLDGSDS-FATKFLVADAAEITGT-PLVWGTVLRFHG  169 (370)
T ss_pred             EEeeeecCHHHHHHHHhCC--CEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEEEecCEE
Confidence            222    245667778775  999988774 5544455567888886 677776655444

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=95.83  E-value=0.61  Score=45.63  Aligned_cols=87  Identities=20%  Similarity=0.248  Sum_probs=58.4

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~  147 (349)
                      ..++|.|+    |++   |.+|..+++.|++.||  +|+.+..+.....                ++.+    ..+++++
T Consensus         6 ~p~siavv----GaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i~----------------G~~~----~~sl~~l   61 (447)
T TIGR02717         6 NPKSVAVI----GASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEIL----------------GVKA----YPSVLEI   61 (447)
T ss_pred             CCCEEEEE----ccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCccC----------------Cccc----cCCHHHC
Confidence            35789999    998   7789999999999998  5766654432221                2221    1233333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      -.  .+|.++-+..  -..+..+++.|.+.|++.+|.+|+
T Consensus        62 p~--~~Dlavi~vp--~~~~~~~l~e~~~~gv~~~vi~s~   97 (447)
T TIGR02717        62 PD--PVDLAVIVVP--AKYVPQVVEECGEKGVKGAVVITA   97 (447)
T ss_pred             CC--CCCEEEEecC--HHHHHHHHHHHHhcCCCEEEEECC
Confidence            22  3587775444  566677888888889988888776

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.82  E-value=0.029  Score=56.46  Aligned_cols=92  Identities=16%  Similarity=0.215  Sum_probs=62.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~~~~  150 (349)
                      ..+|+|.     |.|.+|+.++++|.++|++|++++++++..+           ++.+.+..++.||.   +.++++--+
T Consensus       417 ~~hiiI~-----G~G~~G~~la~~L~~~g~~vvvId~d~~~~~-----------~~~~~g~~~i~GD~~~~~~L~~a~i~  480 (558)
T PRK10669        417 CNHALLV-----GYGRVGSLLGEKLLAAGIPLVVIETSRTRVD-----------ELRERGIRAVLGNAANEEIMQLAHLD  480 (558)
T ss_pred             CCCEEEE-----CCChHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHHCCCeEEEcCCCCHHHHHhcCcc
Confidence            4689999     7999999999999999999999999876443           33345788999984   334433211


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i  183 (349)
                       +.|.|+-+.+.+.+ ..+++..+++. +..++|
T Consensus       481 -~a~~viv~~~~~~~-~~~iv~~~~~~~~~~~ii  512 (558)
T PRK10669        481 -CARWLLLTIPNGYE-AGEIVASAREKRPDIEII  512 (558)
T ss_pred             -ccCEEEEEcCChHH-HHHHHHHHHHHCCCCeEE
Confidence             35877766655433 33455555543 444555

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.81  E-value=0.0062  Score=50.12  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=48.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..++|+|+    |+ |.+|..+++.|.+.| ++|++.+|+.+...++..       ++....+...   ..+..+.+.+ 
T Consensus        18 ~~~~i~ii----G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~-   81 (155)
T cd01065          18 KGKKVLIL----GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAE-------RFGELGIAIA---YLDLEELLAE-   81 (155)
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH-------HHhhccccee---ecchhhcccc-
Confidence            46789999    76 999999999999986 889999998754432211       1100001112   2233333444 


Q ss_pred             CccEEEeCCCCCh
Q 018900          152 TFDVVLDNNGKNL  164 (349)
Q Consensus       152 ~~d~Vi~~a~~~~  164 (349)
                       .|+||.+.....
T Consensus        82 -~Dvvi~~~~~~~   93 (155)
T cd01065          82 -ADLIINTTPVGM   93 (155)
T ss_pred             -CCEEEeCcCCCC
Confidence             499999877544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=95.79  E-value=0.071  Score=47.14  Aligned_cols=95  Identities=15%  Similarity=0.237  Sum_probs=65.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc---CCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ++++|||.    |||+- ++.|++.|...+..+++.+-   ..+...+.            ......=.++.+.+.+.++
T Consensus         1 ~~~~ilvl----GGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l~~~~------------~~~~~~G~l~~e~l~~~l~   63 (257)
T COG2099           1 SMMRILLL----GGTSD-ARALAKKLAAAPVDIILSSLTGYGAKLAEQI------------GPVRVGGFLGAEGLAAFLR   63 (257)
T ss_pred             CCceEEEE----eccHH-HHHHHHHhhccCccEEEEEcccccccchhcc------------CCeeecCcCCHHHHHHHHH
Confidence            46789999    99875 89999999998754444443   22221110            0111111346899999999


Q ss_pred             CCCccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEE
Q 018900          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      +.++|.||+..=. -....+|.+++|++.|+..+-|
T Consensus        64 e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~   99 (257)
T COG2099          64 EEGIDLLIDATHPYAARISQNAARAAKETGIPYLRL   99 (257)
T ss_pred             HcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence            9999999986543 3466889999999999876654

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.79  E-value=0.045  Score=50.73  Aligned_cols=97  Identities=15%  Similarity=0.141  Sum_probs=63.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~l~~~  147 (349)
                      .+.+|||.    ||+|-+|..+++.+...|.+|++++++.++.+.+.           ..+++. +..+    .+.+.+.
T Consensus       143 ~g~~vlI~----ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-----------~~Ga~~vi~~~~~~~~~~v~~~  207 (329)
T cd08294         143 AGETVVVN----GAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-----------ELGFDAVFNYKTVSLEEALKEA  207 (329)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeCCCccHHHHHHHH
Confidence            46799999    99999999999999899999999988765433221           112222 1111    1223333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      . ..++|+|+++.+.  ......++.++..|  +|+.++...
T Consensus       208 ~-~~gvd~vld~~g~--~~~~~~~~~l~~~G--~iv~~g~~~  244 (329)
T cd08294         208 A-PDGIDCYFDNVGG--EFSSTVLSHMNDFG--RVAVCGSIS  244 (329)
T ss_pred             C-CCCcEEEEECCCH--HHHHHHHHhhccCC--EEEEEcchh
Confidence            2 2348999998884  34556666665554  788776543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07411 hypothetical protein; Validated

Probab=95.78  E-value=0.088  Score=50.48  Aligned_cols=112  Identities=15%  Similarity=0.128  Sum_probs=69.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      -+..+|||+     |.|.+|..+++.|...|. ++++++.+.-....+..+.+....++              ..+.+++
T Consensus        36 L~~~~Vliv-----G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v  110 (390)
T PRK07411         36 LKAASVLCI-----GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQV  110 (390)
T ss_pred             HhcCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeE
Confidence            346789999     688899999999999996 67777765433333322211111111              1233333


Q ss_pred             EE--c--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 VW--G--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 ~~--~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ..  .  +.+...+.+.++  |+||.+.. |+..-..+-++|.+.++ .+|+.+..+.||
T Consensus       111 ~~~~~~~~~~~~~~~~~~~--D~Vvd~~d-~~~~r~~ln~~~~~~~~-p~v~~~~~g~~g  166 (390)
T PRK07411        111 DLYETRLSSENALDILAPY--DVVVDGTD-NFPTRYLVNDACVLLNK-PNVYGSIFRFEG  166 (390)
T ss_pred             EEEecccCHHhHHHHHhCC--CEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEEccCEE
Confidence            32  2  244556677775  99999877 44444445567777774 788777665554

>PRK06849 hypothetical protein; Provisional

Probab=95.76  E-value=0.065  Score=51.34  Aligned_cols=37  Identities=32%  Similarity=0.387  Sum_probs=33.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ++|+||||    |+...+|..+++.|.+.|++|++++..+.
T Consensus         3 ~~~~VLI~----G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLIT----GARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            46899999    99999999999999999999999988753

>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit

Probab=95.76  E-value=0.047  Score=53.42  Aligned_cols=101  Identities=12%  Similarity=0.099  Sum_probs=59.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecCCC-eEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~~-~~~~~D~~~l~~~~~~  150 (349)
                      |++||||.     |.|.++..+++++.+.|++|++++...+.. ......  +.+-.+ .+.. .-...|.+.+-++...
T Consensus         1 ~~kkili~-----g~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~a--D~~~~~-~~~~~~~~y~d~~~l~~~a~~   72 (449)
T TIGR00514         1 MLDKILIA-----NRGEIALRILRACKELGIKTVAVHSTADRDALHVLLA--DEAVCI-GPAPSAKSYLNIPNIISAAEI   72 (449)
T ss_pred             CcceEEEe-----CCCHHHHHHHHHHHHcCCeEEEEEChhhhcccccccC--CEEEEc-CCCCchhchhCHHHHHHHHHH
Confidence            57899999     789999999999999999999997643211 110000  000000 0000 0012244556666666


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      .++|+|+-..+..-+. ..+.+.+.+.|+ +|+
T Consensus        73 ~~id~I~pg~g~~se~-~~~a~~~e~~Gi-~~~  103 (449)
T TIGR00514        73 TGADAIHPGYGFLSEN-ANFAEQCERSGF-TFI  103 (449)
T ss_pred             hCCCEEEeCCCccccC-HHHHHHHHHCCC-cEE
Confidence            6789998765422121 225667777785 444

This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.75  E-value=0.087  Score=44.51  Aligned_cols=109  Identities=16%  Similarity=0.187  Sum_probs=66.4

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCC-------ccc----c--eecCCCeE--EEc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN-------RFN----E--IVSAGGKT--VWG  139 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~-------~~~----~--l~~~~~~~--~~~  139 (349)
                      +|+|+    | .|-+|.++++.|...|. ++++++.+.-....+..+.+.       +..    .  -..+.+++  +..
T Consensus         1 ~VlVi----G-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~   75 (174)
T cd01487           1 KVGIA----G-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINI   75 (174)
T ss_pred             CEEEE----C-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEe
Confidence            58999    4 79999999999999997 599999875222222111100       000    0  01123333  221


Q ss_pred             --ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEeccccccCC
Q 018900          140 --DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP  193 (349)
Q Consensus       140 --D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~  193 (349)
                        +.+.+.+.++++  |+||.+ ..|...-..+.+.+.+. ++ .||+-+..+-|+.
T Consensus        76 ~~~~~~~~~~l~~~--DlVi~~-~d~~~~r~~i~~~~~~~~~i-p~i~~~~~~~~~~  128 (174)
T cd01487          76 KIDENNLEGLFGDC--DIVVEA-FDNAETKAMLAESLLGNKNK-PVVCASGMAGFGD  128 (174)
T ss_pred             ecChhhHHHHhcCC--CEEEEC-CCCHHHHHHHHHHHHHHCCC-CEEEEehhhccCC
Confidence              245566777765  999998 44666656677877776 64 6776655544444

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.75  E-value=0.076  Score=47.57  Aligned_cols=95  Identities=19%  Similarity=0.280  Sum_probs=66.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~~~  151 (349)
                      |+|||.    |||+ =|+.|++.|.++|+ |.+.+-..-...-.         .......++..|   |.+++.+.+++.
T Consensus         1 m~ILvl----gGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~---------~~~~~~~~v~~G~lg~~~~l~~~l~~~   65 (249)
T PF02571_consen    1 MKILVL----GGTT-EGRKLAERLAEAGY-VIVSVATSYGGELL---------KPELPGLEVRVGRLGDEEGLAEFLREN   65 (249)
T ss_pred             CEEEEE----echH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhh---------ccccCCceEEECCCCCHHHHHHHHHhC
Confidence            689999    8887 48999999999998 55554333111100         000123344443   689999999998


Q ss_pred             CccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEE
Q 018900          152 TFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       152 ~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      +++.||+..=. .....+|+.++|++.|+..+=|
T Consensus        66 ~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~   99 (249)
T PF02571_consen   66 GIDAVIDATHPFAAEISQNAIEACRELGIPYLRF   99 (249)
T ss_pred             CCcEEEECCCchHHHHHHHHHHHHhhcCcceEEE
Confidence            99999986554 3466889999999999865544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.74  E-value=0.047  Score=51.03  Aligned_cols=96  Identities=17%  Similarity=0.142  Sum_probs=62.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EE-cCh----hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VW-GDP----AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~D~----~~l~~  146 (349)
                      .+.+|||+    ||+|.+|..+++.+...|.+|++++++.++.+.++..          .+++. +. .+.    +.+.+
T Consensus       151 ~g~~VlI~----Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~----------lGa~~vi~~~~~~~~~~~i~~  216 (338)
T cd08295         151 KGETVFVS----AASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK----------LGFDDAFNYKEEPDLDAALKR  216 (338)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----------cCCceeEEcCCcccHHHHHHH
Confidence            46799999    9999999999999988999999998876543322110          12222 21 111    22233


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .. +.++|+|+++.+.  ......++.++..|  +|+.++.
T Consensus       217 ~~-~~gvd~v~d~~g~--~~~~~~~~~l~~~G--~iv~~G~  252 (338)
T cd08295         217 YF-PNGIDIYFDNVGG--KMLDAVLLNMNLHG--RIAACGM  252 (338)
T ss_pred             hC-CCCcEEEEECCCH--HHHHHHHHHhccCc--EEEEecc
Confidence            32 2358999999884  44566677776655  6887664

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.73  E-value=0.17  Score=43.78  Aligned_cols=104  Identities=13%  Similarity=0.169  Sum_probs=60.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~~  137 (349)
                      +.++|+|+    | .|.+|+.+++.|...|. ++++++++.-....+..+.+ ...++              ..+.+++.
T Consensus        20 ~~~~V~Iv----G-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~-~~~~iG~~Ka~~~~~~l~~inp~~~i~   93 (200)
T TIGR02354        20 EQATVAIC----G-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQY-KASQVGEPKTEALKENISEINPYTEIE   93 (200)
T ss_pred             hCCcEEEE----C-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccC-ChhhCCCHHHHHHHHHHHHHCCCCEEE
Confidence            46789999    5 58899999999999998 69999987311111111100 00111              01223322


Q ss_pred             --Ec--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHH-hCCCcEEEEe
Q 018900          138 --WG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK-SSGVKQFLFI  185 (349)
Q Consensus       138 --~~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~-~~gv~~~i~~  185 (349)
                        ..  +.+.+.+++.++  |+||.+ ..|...-..+.+.+. ..+...++..
T Consensus        94 ~~~~~i~~~~~~~~~~~~--DlVi~a-~Dn~~~k~~l~~~~~~~~~~~~ii~~  143 (200)
T TIGR02354        94 AYDEKITEENIDKFFKDA--DIVCEA-FDNAEAKAMLVNAVLEKYKDKYLIAA  143 (200)
T ss_pred             EeeeeCCHhHHHHHhcCC--CEEEEC-CCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence              22  356667777765  999999 445554445555554 4444444543

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.71  E-value=0.06  Score=50.21  Aligned_cols=103  Identities=12%  Similarity=0.099  Sum_probs=61.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcCCC--CcccCCCCCCCcccceecCCCeEEEcChhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~  143 (349)
                      +..||.|+    |++|.+|..++..|+..|.       +++.+++++.  .+........+-..... .+..+..    +
T Consensus         2 ~p~KV~II----Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~~----~   72 (323)
T TIGR01759         2 KPVRVAVT----GAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLL-AGVVATT----D   72 (323)
T ss_pred             CCeEEEEE----CCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccccc-CCcEEec----C
Confidence            35689999    9999999999999998874       7999988642  12211100000000000 1222221    2


Q ss_pred             HHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC--cEEEEec
Q 018900          144 VGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV--KQFLFIS  186 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv--~~~i~~S  186 (349)
                      ..+.+++.  |+||.+||.              |..-.+.+...+++.+-  ..+|.+|
T Consensus        73 ~~~~~~da--DvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        73 PEEAFKDV--DAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             hHHHhCCC--CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            23344555  999999994              45557778877777753  3455554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.71  E-value=0.035  Score=51.61  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=63.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-c-ChhhHHh---h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-DPAEVGN---V  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-D~~~l~~---~  147 (349)
                      .+.+|||+    |++|-+|..+++.+...|.+|++++++.++.+.+.           ..+++.+. . +.+.+.+   .
T Consensus       138 ~g~~VLI~----ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~~  202 (325)
T TIGR02825       138 GGETVMVN----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-----------KLGFDVAFNYKTVKSLEETLKK  202 (325)
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeccccccHHHHHHH
Confidence            46799999    99999999999988889999999988765433221           12332221 1 1122222   2


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|+|+++.|..  .....++.++..|  +||.++..
T Consensus       203 ~~~~gvdvv~d~~G~~--~~~~~~~~l~~~G--~iv~~G~~  239 (325)
T TIGR02825       203 ASPDGYDCYFDNVGGE--FSNTVIGQMKKFG--RIAICGAI  239 (325)
T ss_pred             hCCCCeEEEEECCCHH--HHHHHHHHhCcCc--EEEEecch
Confidence            2233589999998843  3466677776655  78877653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.66  E-value=0.11  Score=39.76  Aligned_cols=88  Identities=20%  Similarity=0.273  Sum_probs=57.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .++++|||+    | .|-+|..=++.|++.|.+|+++....+..+               ..+++..-+.   +..+.+.
T Consensus         5 l~~~~vlVv----G-gG~va~~k~~~Ll~~gA~v~vis~~~~~~~---------------~~i~~~~~~~---~~~l~~~   61 (103)
T PF13241_consen    5 LKGKRVLVV----G-GGPVAARKARLLLEAGAKVTVISPEIEFSE---------------GLIQLIRREF---EEDLDGA   61 (103)
T ss_dssp             -TT-EEEEE----E-ESHHHHHHHHHHCCCTBEEEEEESSEHHHH---------------TSCEEEESS----GGGCTTE
T ss_pred             cCCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEECCchhhhh---------------hHHHHHhhhH---HHHHhhh
Confidence            467899999    5 599999999999999999999998741111               1233332222   2335553


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                        +.|+ .+..+-.....+.+.|++.|+  ++....
T Consensus        62 --~lV~-~at~d~~~n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   62 --DLVF-AATDDPELNEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             --SEEE-E-SS-HHHHHHHHHHHHHTTS--EEEETT
T ss_pred             --eEEE-ecCCCHHHHHHHHHHHhhCCE--EEEECC
Confidence              7666 455566667888999998886  666554

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.63  E-value=0.022  Score=52.53  Aligned_cols=103  Identities=17%  Similarity=0.269  Sum_probs=59.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceec--CCCeEEE--cChhhH---
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVS--AGGKTVW--GDPAEV---  144 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~--~~~~~~~--~D~~~l---  144 (349)
                      |+|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+........   .++..  ...+++.  .....+   
T Consensus         1 M~Ig~I-----GlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v   75 (298)
T TIGR00872         1 MQLGLI-----GLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAV   75 (298)
T ss_pred             CEEEEE-----cchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHH
Confidence            479999     58999999999999999999999998765443332111111   11110  0112221  111111   


Q ss_pred             -HhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          145 -GNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       145 -~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                       +.+....+ -++||++.......+..+.+.+++.|+ +|+
T Consensus        76 ~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~-~~v  115 (298)
T TIGR00872        76 LEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGI-HLL  115 (298)
T ss_pred             HHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCC-eEE
Confidence             22222111 267777777776777777777777665 444

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.63  E-value=0.018  Score=52.86  Aligned_cols=92  Identities=13%  Similarity=0.127  Sum_probs=58.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC-------------CCeEEEcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-------------GGKTVWGD  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~D  140 (349)
                      +++|.|+    | .|.+|..++..|+..|++|++.+++++..+.........+..+...             +++ ..  
T Consensus         5 ~~~V~Vi----G-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~-~~--   76 (286)
T PRK07819          5 IQRVGVV----G-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLR-FT--   76 (286)
T ss_pred             ccEEEEE----c-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeE-ee--
Confidence            4589999    5 5999999999999999999999998865543110000000001111             111 11  


Q ss_pred             hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhC
Q 018900          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS  177 (349)
Q Consensus       141 ~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~  177 (349)
                       .+++ .+.++  |+||.+...+.+.-+.+...+.+.
T Consensus        77 -~~~~-~~~~~--d~ViEav~E~~~~K~~l~~~l~~~  109 (286)
T PRK07819         77 -TDLG-DFADR--QLVIEAVVEDEAVKTEIFAELDKV  109 (286)
T ss_pred             -CCHH-HhCCC--CEEEEecccCHHHHHHHHHHHHHh
Confidence             2232 24554  999999999988877777666554

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.58  E-value=0.045  Score=50.88  Aligned_cols=101  Identities=24%  Similarity=0.325  Sum_probs=62.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .++||.|+    |+ |.+|..++..|..+|.  +++.++++.+..........+-. .+. ..+.+..+|.   + .+++
T Consensus         5 ~~~ki~ii----Ga-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~-~~~-~~~~i~~~~~---~-~~~~   73 (315)
T PRK00066          5 QHNKVVLV----GD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAV-PFT-SPTKIYAGDY---S-DCKD   73 (315)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhc-ccc-CCeEEEeCCH---H-HhCC
Confidence            35699999    87 9999999999999886  89999997754432211000000 001 1233333333   3 2455


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                      .  |+||-++|.              |....+.+++.+++.+. ..+|.+|
T Consensus        74 a--divIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         74 A--DLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             C--CEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            5  999999994              34556777777777653 3455444

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.58  E-value=0.015  Score=51.10  Aligned_cols=38  Identities=26%  Similarity=0.350  Sum_probs=34.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |+|.|+    ||+|.+|..+++.|.+.||+|++.+|+++...
T Consensus         1 MkI~II----GG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~   38 (219)
T TIGR01915         1 MKIAVL----GGTGDQGKGLALRLAKAGNKIIIGSRDLEKAE   38 (219)
T ss_pred             CEEEEE----cCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHH
Confidence            579999    99999999999999999999999999875543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.57  E-value=0.093  Score=48.63  Aligned_cols=35  Identities=26%  Similarity=0.349  Sum_probs=31.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      +.|+|.|+     |.|.+|..+++.|.+.||+|++.+|+.
T Consensus         3 ~~m~I~ii-----G~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          3 QPKTIAIL-----GAGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCEEEEE-----CccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            35689999     789999999999999999999999975

>PRK08462 biotin carboxylase; Validated

Probab=95.56  E-value=0.065  Score=52.34  Aligned_cols=103  Identities=13%  Similarity=0.155  Sum_probs=64.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCC-eEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGG-KTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~-~~~~~D~~~l~~~~~  149 (349)
                      .++||||.     +.|.++..+++++.+.|++|+++....+....-..    ..++...  ++. .-...|.+.+-++.+
T Consensus         3 ~~k~ili~-----~~g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~----~ad~~~~~~~~~~~~~y~~~~~l~~~~~   73 (445)
T PRK08462          3 EIKRILIA-----NRGEIALRAIRTIQEMGKEAIAIYSTADKDALYLK----YADAKICIGGAKSSESYLNIPAIISAAE   73 (445)
T ss_pred             CCCEEEEE-----CCcHHHHHHHHHHHHcCCCEEEEechhhcCCchhh----hCCEEEEeCCCchhcccCCHHHHHHHHH
Confidence            47899999     78999999999999999999999765543210000    0011100  000 002235667777777


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ..++|+|+-..+. +.....+.+.+++.|+ +|+-.+
T Consensus        74 ~~~~D~i~pg~g~-lse~~~~a~~~e~~Gi-~~~g~~  108 (445)
T PRK08462         74 IFEADAIFPGYGF-LSENQNFVEICSHHNI-KFIGPS  108 (445)
T ss_pred             HcCCCEEEECCCc-cccCHHHHHHHHHCCC-eEECcC
Confidence            7789999987762 2223556677888886 444333

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.54  E-value=0.042  Score=50.66  Aligned_cols=92  Identities=20%  Similarity=0.283  Sum_probs=59.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+    | .|.+|+.+++.|...|.+|++.+|+.+....           ....+.+.+  +.+++.+.+.+. 
T Consensus       151 ~g~kvlVi----G-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-----------~~~~G~~~~--~~~~l~~~l~~a-  211 (296)
T PRK08306        151 HGSNVLVL----G-FGRTGMTLARTLKALGANVTVGARKSAHLAR-----------ITEMGLSPF--HLSELAEEVGKI-  211 (296)
T ss_pred             CCCEEEEE----C-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----------HHHcCCeee--cHHHHHHHhCCC-
Confidence            47899999    6 5889999999999999999999998643211           111233322  445677777765 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       |+||++....+ ....+++.++. + .-+|-+++
T Consensus       212 -DiVI~t~p~~~-i~~~~l~~~~~-g-~vIIDla~  242 (296)
T PRK08306        212 -DIIFNTIPALV-LTKEVLSKMPP-E-ALIIDLAS  242 (296)
T ss_pred             -CEEEECCChhh-hhHHHHHcCCC-C-cEEEEEcc
Confidence             99999875322 23444444443 2 23554554

>PRK05442 malate dehydrogenase; Provisional

Probab=95.54  E-value=0.071  Score=49.78  Aligned_cols=104  Identities=12%  Similarity=0.072  Sum_probs=61.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcCCCC--cccCCCCCCCcccceecCCCeEEEcChhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D~~~  143 (349)
                      .++||.|+    |++|.+|..++..|+..|.       +++.++++++.  +........+-..... .++.+..+|   
T Consensus         3 ~~~KV~Ii----GaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~-~~~~i~~~~---   74 (326)
T PRK05442          3 APVRVAVT----GAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLL-AGVVITDDP---   74 (326)
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhc-CCcEEecCh---
Confidence            35799999    9999999999999988653       78889885421  2211100000000000 122222222   


Q ss_pred             HHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC--CcEEEEecc
Q 018900          144 VGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG--VKQFLFISS  187 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g--v~~~i~~Ss  187 (349)
                       .+.+.+.  |+||-+||.              |..-.+.+...+++..  -..+|.+|-
T Consensus        75 -y~~~~da--DiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         75 -NVAFKDA--DVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -HHHhCCC--CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence             3344555  999999983              4455777787777733  445666663

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.54  E-value=0.075  Score=49.05  Aligned_cols=96  Identities=17%  Similarity=0.216  Sum_probs=64.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D----~~~l~~~  147 (349)
                      .+.+|||.    |++|-+|..+++.+...|.+|+++++..+....+..           .+++.+ ..+    .+.+.+.
T Consensus       139 ~g~~vlI~----g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~i~~~  203 (324)
T cd08292         139 PGQWLIQN----AAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-----------LGIGPVVSTEQPGWQDKVREA  203 (324)
T ss_pred             CCCEEEEc----ccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-----------cCCCEEEcCCCchHHHHHHHH
Confidence            45789999    999999999999999999999999887654332211           122222 112    2334555


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+|+++.+..  .....++.++..|  +||.++.
T Consensus       204 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~~g--~~v~~g~  239 (324)
T cd08292         204 AGGAPISVALDSVGGK--LAGELLSLLGEGG--TLVSFGS  239 (324)
T ss_pred             hCCCCCcEEEECCCCh--hHHHHHHhhcCCc--EEEEEec
Confidence            5555689999998854  3455566665544  7887764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.52  E-value=0.042  Score=51.71  Aligned_cols=91  Identities=23%  Similarity=0.258  Sum_probs=53.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc-
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG-  149 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~-  149 (349)
                      ...+++|||.    ||+|-+|++.++-+...|..+++.+++.++.+-.+..         ....-+.+.|++-.+.+.+ 
T Consensus       155 ~~~g~~vLv~----ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~l---------GAd~vvdy~~~~~~e~~kk~  221 (347)
T KOG1198|consen  155 LSKGKSVLVL----GGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKL---------GADEVVDYKDENVVELIKKY  221 (347)
T ss_pred             cCCCCeEEEE----eCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHc---------CCcEeecCCCHHHHHHHHhh
Confidence            3457799999    9999999999999999894444455544433211111         1111122333333333333 


Q ss_pred             -CCCccEEEeCCCCChhhHHHHHHHHH
Q 018900          150 -GVTFDVVLDNNGKNLDAVRPVADWAK  175 (349)
Q Consensus       150 -~~~~d~Vi~~a~~~~~~~~~ll~~a~  175 (349)
                       ..++|+|++|.+.. ..++.+...+.
T Consensus       222 ~~~~~DvVlD~vg~~-~~~~~~~~l~~  247 (347)
T KOG1198|consen  222 TGKGVDVVLDCVGGS-TLTKSLSCLLK  247 (347)
T ss_pred             cCCCccEEEECCCCC-ccccchhhhcc
Confidence             33589999999965 33333333333

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.49  E-value=0.082  Score=48.90  Aligned_cols=100  Identities=17%  Similarity=0.261  Sum_probs=56.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--e-EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--E-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +++|-|+    |+||-+|+.+++.|.++.+  + +.++...+....+        +.+...+.+.+    +++..+...-
T Consensus         1 ~~~Vavv----GATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~--------~~~f~~~~~~v----~~~~~~~~~~   64 (334)
T COG0136           1 KLNVAVL----GATGAVGQVLLELLEERHFPFEELVLLASARSAGKK--------YIEFGGKSIGV----PEDAADEFVF   64 (334)
T ss_pred             CcEEEEE----eccchHHHHHHHHHHhcCCCcceEEEEecccccCCc--------cccccCccccC----cccccccccc
Confidence            4789999    9999999999999999754  2 3333332221111        00111111110    1111111111


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCC
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      .++|.|+.++|-++.  +.+...+.++|   ++.++-.+.|...
T Consensus        65 ~~~Divf~~ag~~~s--~~~~p~~~~~G---~~VIdnsSa~Rm~  103 (334)
T COG0136          65 SDVDIVFFAAGGSVS--KEVEPKAAEAG---CVVIDNSSAFRMD  103 (334)
T ss_pred             ccCCEEEEeCchHHH--HHHHHHHHHcC---CEEEeCCcccccC
Confidence            146999999986655  78888888888   3344444454443

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.47  E-value=0.0067  Score=51.62  Aligned_cols=99  Identities=17%  Similarity=0.218  Sum_probs=59.7

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC-------------CCeEEEcChh
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-------------GGKTVWGDPA  142 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~D~~  142 (349)
                      +|.|+    |+ |.+|+.++..++..|++|++++++++..++........+..+...             ++. +   ..
T Consensus         1 ~V~Vi----Ga-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~-~---~~   71 (180)
T PF02737_consen    1 KVAVI----GA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARIS-F---TT   71 (180)
T ss_dssp             EEEEE----S--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEE-E---ES
T ss_pred             CEEEE----cC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcc-c---cc
Confidence            68999    55 999999999999999999999998754432211100001111000             111 1   13


Q ss_pred             hHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +++++. +  .|.||-+...+++.-+.++..+.+.--..-|+.|
T Consensus        72 dl~~~~-~--adlViEai~E~l~~K~~~~~~l~~~~~~~~ilas  112 (180)
T PF02737_consen   72 DLEEAV-D--ADLVIEAIPEDLELKQELFAELDEICPPDTILAS  112 (180)
T ss_dssp             SGGGGC-T--ESEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE
T ss_pred             CHHHHh-h--hheehhhccccHHHHHHHHHHHHHHhCCCceEEe
Confidence            344444 4  3999999999999999999988775333344444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.46  E-value=0.055  Score=49.76  Aligned_cols=39  Identities=23%  Similarity=0.335  Sum_probs=33.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |+++|.|+     |.|.+|..+++.|.+.|++|++.+|+++...
T Consensus         1 ~~~~Igvi-----G~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~   39 (296)
T PRK11559          1 MTMKVGFI-----GLGIMGKPMSKNLLKAGYSLVVYDRNPEAVA   39 (296)
T ss_pred             CCceEEEE-----ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHH
Confidence            45789999     5899999999999999999999999865443

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.46  E-value=0.048  Score=51.02  Aligned_cols=95  Identities=15%  Similarity=0.146  Sum_probs=61.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC----hhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD----PAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D----~~~l~~~~  148 (349)
                      .+|||+    ||+|-+|..+++.+...|. +|+++++++++.+.+..          ..+++.+ ..+    .+.+.++.
T Consensus       156 ~~VlI~----ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~----------~lGa~~vi~~~~~~~~~~i~~~~  221 (345)
T cd08293         156 QTMVVS----GAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS----------ELGFDAAINYKTDNVAERLRELC  221 (345)
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----------hcCCcEEEECCCCCHHHHHHHHC
Confidence            799999    9999999999998888998 79999887644321111          0122222 111    12233332


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                       +.++|+|+++.+..  .....++.++..|  +||.++..
T Consensus       222 -~~gvd~vid~~g~~--~~~~~~~~l~~~G--~iv~~G~~  256 (345)
T cd08293         222 -PEGVDVYFDNVGGE--ISDTVISQMNENS--HIILCGQI  256 (345)
T ss_pred             -CCCceEEEECCCcH--HHHHHHHHhccCC--EEEEEeee
Confidence             23589999998854  2456677776655  68877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=95.45  E-value=0.064  Score=49.95  Aligned_cols=94  Identities=14%  Similarity=0.073  Sum_probs=54.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+|||||    |+.+-+  .+++.|.+.  |++|++++.++.......   .+.+  ...+... .....+.+.++.+..
T Consensus         1 ~~~vLv~----g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~~~~---~d~~--~~~p~~~-~~~~~~~l~~~~~~~   68 (326)
T PRK12767          1 MMNILVT----SAGRRV--QLVKALKKSLLKGRVIGADISELAPALYF---ADKF--YVVPKVT-DPNYIDRLLDICKKE   68 (326)
T ss_pred             CceEEEe----cCCccH--HHHHHHHHhccCCEEEEECCCCcchhhHh---ccCc--EecCCCC-ChhHHHHHHHHHHHh
Confidence            6899999    886665  889999988  499999987753321100   0000  0000000 011135667777777


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      ++|+|+-+....+.....+.+...+.|.
T Consensus        69 ~id~ii~~~d~~~~~~a~~~~~l~~~g~   96 (326)
T PRK12767         69 KIDLLIPLIDPELPLLAQNRDRFEEIGV   96 (326)
T ss_pred             CCCEEEECCcHHHHHHHHHHHHHHHcCc
Confidence            8999997655443333344444555554

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=95.43  E-value=0.26  Score=43.10  Aligned_cols=77  Identities=21%  Similarity=0.319  Sum_probs=50.3

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCC--CeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~D---~~~l~  145 (349)
                      ++|++||+    |-  .--|++.|++.|.++|.++.....++.-..        +..++..+-  --++.||   .++++
T Consensus         5 ~GK~~lI~----Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~k--------rv~~la~~~~s~~v~~cDV~~d~~i~   72 (259)
T COG0623           5 EGKRILIM----GVANNRSIAWGIAKALAEQGAELAFTYQGERLEK--------RVEELAEELGSDLVLPCDVTNDESID   72 (259)
T ss_pred             CCceEEEE----EecccccHHHHHHHHHHHcCCEEEEEeccHHHHH--------HHHHHHhhccCCeEEecCCCCHHHHH
Confidence            57899999    75  457999999999999999888876652111        112222111  1234555   55566


Q ss_pred             hhhcCC-----CccEEEeCCC
Q 018900          146 NVVGGV-----TFDVVLDNNG  161 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~  161 (349)
                      .+|...     ++|.++|+.+
T Consensus        73 ~~f~~i~~~~g~lD~lVHsIa   93 (259)
T COG0623          73 ALFATIKKKWGKLDGLVHSIA   93 (259)
T ss_pred             HHHHHHHHhhCcccEEEEEec
Confidence            655433     3799999887

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.39  E-value=0.071  Score=51.58  Aligned_cols=39  Identities=15%  Similarity=0.258  Sum_probs=34.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~  117 (349)
                      +++|.|+     |.|++|..++..|.+.||+|++++++++..+.
T Consensus         3 ~~kI~VI-----GlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~   41 (415)
T PRK11064          3 FETISVI-----GLGYIGLPTAAAFASRQKQVIGVDINQHAVDT   41 (415)
T ss_pred             ccEEEEE-----CcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence            5789999     78999999999999999999999998765544

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.39  E-value=0.15  Score=47.13  Aligned_cols=109  Identities=23%  Similarity=0.316  Sum_probs=68.7

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE--EE
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT--VW  138 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~--~~  138 (349)
                      ||||+    | .|.+|.++++.|...|. ++++++.+.-....+..+-+-+..++              ..+.+++  ..
T Consensus         1 kVlIV----G-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~   75 (312)
T cd01489           1 KVLVV----G-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYH   75 (312)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEe
Confidence            58999    5 69999999999999996 68888876544333332211111111              0123333  33


Q ss_pred             cChhh---HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          139 GDPAE---VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       139 ~D~~~---l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      .+..+   ..+.+++  +|+||.+.. +...-..+-+.|+..++ .||..++.|.+|.
T Consensus        76 ~~i~~~~~~~~f~~~--~DvVv~a~D-n~~ar~~in~~c~~~~i-p~I~~gt~G~~G~  129 (312)
T cd01489          76 ANIKDPDFNVEFFKQ--FDLVFNALD-NLAARRHVNKMCLAADV-PLIESGTTGFLGQ  129 (312)
T ss_pred             ccCCCccchHHHHhc--CCEEEECCC-CHHHHHHHHHHHHHCCC-CEEEEecCcceeE
Confidence            33221   2355555  499998765 66666667778888886 6888888777664

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.39  E-value=0.061  Score=52.51  Aligned_cols=73  Identities=21%  Similarity=0.278  Sum_probs=49.6

Q ss_pred             ccceEEEEEecCCCc----------------ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe
Q 018900           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK  135 (349)
Q Consensus        72 ~~~~~VLVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~  135 (349)
                      -.+++||||    +|                ||..|..|++++..+|++|+.+.-.-. ..             ...+++
T Consensus       254 l~gkkvLIT----aGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-------------~p~~v~  315 (475)
T PRK13982        254 LAGRRVLIT----AGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-------------DPQGVK  315 (475)
T ss_pred             cCCCEEEEe----cCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-------------CCCCce
Confidence            468899999    54                699999999999999999999984321 10             112455


Q ss_pred             EEEcC-hhhHHhhh-cCCCccEEEeCCCC
Q 018900          136 TVWGD-PAEVGNVV-GGVTFDVVLDNNGK  162 (349)
Q Consensus       136 ~~~~D-~~~l~~~~-~~~~~d~Vi~~a~~  162 (349)
                      ++..+ -+++.+.+ +..+.|++|++|++
T Consensus       316 ~i~V~ta~eM~~av~~~~~~Di~I~aAAV  344 (475)
T PRK13982        316 VIHVESARQMLAAVEAALPADIAIFAAAV  344 (475)
T ss_pred             EEEecCHHHHHHHHHhhCCCCEEEEeccc
Confidence            55444 33333333 22336999999884

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=95.38  E-value=0.12  Score=46.76  Aligned_cols=32  Identities=25%  Similarity=0.212  Sum_probs=26.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTV  110 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R  110 (349)
                      |+||.|+    |. |.+|+.+++.|.+. +.++.++..
T Consensus         1 m~rVgIi----G~-G~iG~~~~~~l~~~~~~~l~~v~~   33 (265)
T PRK13303          1 MMKVAMI----GF-GAIGAAVLELLEHDPDLRVDWVIV   33 (265)
T ss_pred             CcEEEEE----CC-CHHHHHHHHHHhhCCCceEEEEEE
Confidence            4699999    66 99999999999876 567766663

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.38  E-value=0.068  Score=43.97  Aligned_cols=69  Identities=19%  Similarity=0.282  Sum_probs=50.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC----------hhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----------PAE  143 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----------~~~  143 (349)
                      ..||+|-    ||-|-+|+.+++.+.+++|-|.-++..+..-..              ..+ ++.+|          .+.
T Consensus         3 agrVivY----GGkGALGSacv~~FkannywV~siDl~eNe~Ad--------------~sI-~V~~~~swtEQe~~v~~~   63 (236)
T KOG4022|consen    3 AGRVIVY----GGKGALGSACVEFFKANNYWVLSIDLSENEQAD--------------SSI-LVDGNKSWTEQEQSVLEQ   63 (236)
T ss_pred             CceEEEE----cCcchHhHHHHHHHHhcCeEEEEEeeccccccc--------------ceE-EecCCcchhHHHHHHHHH
Confidence            3589999    999999999999999999998888865522110              011 12222          356


Q ss_pred             HHhhhcCCCccEEEeCCC
Q 018900          144 VGNVVGGVTFDVVLDNNG  161 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~  161 (349)
                      +.+.+++.++|.|++.||
T Consensus        64 vg~sL~gekvDav~CVAG   81 (236)
T KOG4022|consen   64 VGSSLQGEKVDAVFCVAG   81 (236)
T ss_pred             HHHhhcccccceEEEeec
Confidence            777788888999999877

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.36  E-value=0.059  Score=49.75  Aligned_cols=103  Identities=17%  Similarity=0.229  Sum_probs=63.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccceec----CCCeEE-EcChhh---
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVS----AGGKTV-WGDPAE---  143 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~l~~----~~~~~~-~~D~~~---  143 (349)
                      |+|.|+     |.|.+|..+++.|++.|++|++.+|+++..+++......   ...++..    .++-++ .-+.+.   
T Consensus         1 m~Ig~I-----GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~   75 (301)
T PRK09599          1 MQLGMI-----GLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDA   75 (301)
T ss_pred             CEEEEE-----cccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHH
Confidence            479999     799999999999999999999999987554433211111   1111111    111111 112112   


Q ss_pred             -HHhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          144 -VGNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       144 -l~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                       +..+....+ -++||++.......++.+.+.+++.|+ +||
T Consensus        76 v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~-~~~  116 (301)
T PRK09599         76 TIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGI-HFV  116 (301)
T ss_pred             HHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCC-EEE
Confidence             222222211 377888888888888888888888886 455

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.36  E-value=0.1  Score=48.18  Aligned_cols=97  Identities=16%  Similarity=0.209  Sum_probs=63.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe--EEEcCh---hhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGDP---AEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~D~---~~l~~~  147 (349)
                      .+.+|||+    |++|-+|..+++.+...|.+|++++++.+....+..           .+..  +...+.   +.+...
T Consensus       166 ~~~~vlI~----g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  230 (342)
T cd08266         166 PGETVLVH----GAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-----------LGADYVIDYRKEDFVREVREL  230 (342)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCCeEEecCChHHHHHHHHH
Confidence            45789999    999999999999999999999999887643322110           0111  111222   223333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+..+|.++++++.  .....+++.++..|  +++.+++.
T Consensus       231 ~~~~~~d~~i~~~g~--~~~~~~~~~l~~~G--~~v~~~~~  267 (342)
T cd08266         231 TGKRGVDVVVEHVGA--ATWEKSLKSLARGG--RLVTCGAT  267 (342)
T ss_pred             hCCCCCcEEEECCcH--HHHHHHHHHhhcCC--EEEEEecC
Confidence            334458999999885  34455666666544  78888764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=95.36  E-value=0.1  Score=48.31  Aligned_cols=82  Identities=20%  Similarity=0.246  Sum_probs=52.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+.+|.|+    |||||+|..+++.|.++.+ ++..+......                  .+       ...+..+.+ 
T Consensus         1 ~~~~VaIv----GAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------------~~-------~~~~~~~~~-   50 (313)
T PRK11863          1 MKPKVFID----GEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------------DA-------AARRELLNA-   50 (313)
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------------cc-------cCchhhhcC-
Confidence            57899999    9999999999999988753 66666543311                  00       111223333 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                       +|+|+.+....  ....++..+.+.|. ++|=+|+.
T Consensus        51 -~DvvFlalp~~--~s~~~~~~~~~~g~-~VIDlSad   83 (313)
T PRK11863         51 -ADVAILCLPDD--AAREAVALIDNPAT-RVIDASTA   83 (313)
T ss_pred             -CCEEEECCCHH--HHHHHHHHHHhCCC-EEEECChh
Confidence             49888877533  44556666656665 67777763

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.35  E-value=0.1  Score=48.19  Aligned_cols=95  Identities=18%  Similarity=0.195  Sum_probs=62.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D---~~~l~~~~~  149 (349)
                      ..+|||.    |++|.+|..+++.+...|.+|+++++.+++.+.+.           ..+++.+. .+   .+.+... .
T Consensus       147 ~~~vlI~----g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~v~~~~~~~~~~~~~~-~  210 (326)
T cd08289         147 QGPVLVT----GATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-----------KLGAKEVIPREELQEESIKPL-E  210 (326)
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-----------HcCCCEEEcchhHHHHHHHhh-c
Confidence            4689999    99999999999999999999999998775433221           11222221 11   1223332 2


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +..+|+|+++.+.  ......+++++..|  ++|.++..
T Consensus       211 ~~~~d~vld~~g~--~~~~~~~~~l~~~G--~~i~~g~~  245 (326)
T cd08289         211 KQRWAGAVDPVGG--KTLAYLLSTLQYGG--SVAVSGLT  245 (326)
T ss_pred             cCCcCEEEECCcH--HHHHHHHHHhhcCC--EEEEEeec
Confidence            3348999999884  34566677776655  78877753

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.33  E-value=0.012  Score=53.85  Aligned_cols=92  Identities=21%  Similarity=0.248  Sum_probs=58.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC---CCccc---cee--------cCCCeEEEc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP---FNRFN---EIV--------SAGGKTVWG  139 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~---~~~~~---~l~--------~~~~~~~~~  139 (349)
                      .++|.|+     |.|.+|..++..|...|++|++.+++.+..++.....   ...+.   .+.        ..+++.   
T Consensus         3 ~~kIaVi-----GaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---   74 (287)
T PRK08293          3 IKNVTVA-----GAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---   74 (287)
T ss_pred             ccEEEEE-----CCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---
Confidence            4689999     5699999999999999999999999875433221100   00000   000        011111   


Q ss_pred             ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHh
Q 018900          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (349)
Q Consensus       140 D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~  176 (349)
                       ..++++++++.  |+||.+...+.+..+.+++.+.+
T Consensus        75 -~~d~~~a~~~a--DlVieavpe~~~~k~~~~~~l~~  108 (287)
T PRK08293         75 -TTDLAEAVKDA--DLVIEAVPEDPEIKGDFYEELAK  108 (287)
T ss_pred             -eCCHHHHhcCC--CEEEEeccCCHHHHHHHHHHHHh
Confidence             13455566665  99999988887777777765544

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=95.31  E-value=0.05  Score=53.39  Aligned_cols=104  Identities=16%  Similarity=0.286  Sum_probs=66.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCC---------CCCcccceec----CCCeEE-Ec
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP---------PFNRFNEIVS----AGGKTV-WG  139 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~---------~~~~~~~l~~----~~~~~~-~~  139 (349)
                      |.+|.|+     |.|-.|..+++.|++.||+|++.+|+++..+++...         ......++..    +++-++ ..
T Consensus         1 ~~~IgvI-----GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~   75 (470)
T PTZ00142          1 MSDIGLI-----GLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIK   75 (470)
T ss_pred             CCEEEEE-----eEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeC
Confidence            3579999     799999999999999999999999987664433211         1111122221    222222 12


Q ss_pred             ChhhHH----hhhcCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          140 DPAEVG----NVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       140 D~~~l~----~~~~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +.+.++    .+.... +-|+||++.......+....+.+++.|+ +|+
T Consensus        76 ~~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi-~fl  123 (470)
T PTZ00142         76 AGEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGI-LYL  123 (470)
T ss_pred             ChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            322222    222111 1388888888888888999999988887 555

>PRK07877 hypothetical protein; Provisional

Probab=95.29  E-value=0.12  Score=53.24  Aligned_cols=104  Identities=17%  Similarity=0.278  Sum_probs=67.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      ...+|+|+    |. | +|+.++..|...|-  ++++++.+.-....+..+.. ...++              .++.+++
T Consensus       106 ~~~~V~Iv----G~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~-~~~diG~~Kv~~a~~~l~~inp~i~v  178 (722)
T PRK07877        106 GRLRIGVV----GL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPA-GVFDLGVNKAVVAARRIAELDPYLPV  178 (722)
T ss_pred             hcCCEEEE----Ee-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccC-ChhhcccHHHHHHHHHHHHHCCCCEE
Confidence            46789999    88 8 99999999999984  88888876533322221110 11111              1233433


Q ss_pred             E--Ec--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          137 V--WG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       137 ~--~~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .  ..  +.+.+++++.++  |+||.|.. |++.-..+-++|.+.++ .+|+-++
T Consensus       179 ~~~~~~i~~~n~~~~l~~~--DlVvD~~D-~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        179 EVFTDGLTEDNVDAFLDGL--DVVVEECD-SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             EEEeccCCHHHHHHHhcCC--CEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence            3  22  367888888775  99999887 45544455568888886 5666554

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.29  E-value=0.095  Score=47.73  Aligned_cols=103  Identities=24%  Similarity=0.327  Sum_probs=69.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccC-CCCCCCcccce--ecCCCeE---EEcChhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEI--VSAGGKT---VWGDPAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~~~l--~~~~~~~---~~~D~~~l~~~~  148 (349)
                      ++|-++     |.|-.|..+++.|++.||+|++.+|++++..+. ...........  .-...++   ...|.+++++++
T Consensus         1 ~kIafI-----GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~   75 (286)
T COG2084           1 MKIAFI-----GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVL   75 (286)
T ss_pred             CeEEEE-----cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHH
Confidence            478889     899999999999999999999999998763222 11111111110  0012222   234666666665


Q ss_pred             cCC--------CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          149 GGV--------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       149 ~~~--------~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      .+.        +-.++|++..+..+.++.+.+.+++.|. +|+
T Consensus        76 ~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~-~~l  117 (286)
T COG2084          76 FGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGL-EFL  117 (286)
T ss_pred             hCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCC-cEE
Confidence            321        1367888999999999999999999886 444

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.27  E-value=0.02  Score=52.50  Aligned_cols=89  Identities=20%  Similarity=0.333  Sum_probs=55.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc------eec-------CCCeEEEcCh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE------IVS-------AGGKTVWGDP  141 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~------l~~-------~~~~~~~~D~  141 (349)
                      ++|.|+     |.|.+|..++..|.+.|++|++.+++++..++........+..      +..       .+++  .  .
T Consensus         2 ~~V~VI-----G~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~--~--~   72 (288)
T PRK09260          2 EKLVVV-----GAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLS--Y--S   72 (288)
T ss_pred             cEEEEE-----CccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE--E--e
Confidence            579999     5599999999999999999999999876544321100000000      000       0011  0  1


Q ss_pred             hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHH
Q 018900          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA  174 (349)
Q Consensus       142 ~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a  174 (349)
                      .++.+.++++  |+||-+...+....+.++..+
T Consensus        73 ~~~~~~~~~a--D~Vi~avpe~~~~k~~~~~~l  103 (288)
T PRK09260         73 LDLKAAVADA--DLVIEAVPEKLELKKAVFETA  103 (288)
T ss_pred             CcHHHhhcCC--CEEEEeccCCHHHHHHHHHHH
Confidence            3455566665  999999887766555555443

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.25  E-value=0.075  Score=48.94  Aligned_cols=101  Identities=18%  Similarity=0.229  Sum_probs=62.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEEEc---ChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTVWG---DPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~---D~~~l~~~  147 (349)
                      |++|.|+     |.|.+|..+++.|++.||+|++.+|+++..+++........   .+.. ...+++..   +...+..+
T Consensus         1 m~~Ig~I-----GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~-~~aDvVi~~vp~~~~~~~v   74 (296)
T PRK15461          1 MAAIAFI-----GLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAA-AGAEFVITMLPNGDLVRSV   74 (296)
T ss_pred             CCeEEEE-----eeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHH-hcCCEEEEecCCHHHHHHH
Confidence            3589999     79999999999999999999999998765543322111111   1111 12222221   22234444


Q ss_pred             hcC-------CC-ccEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          148 VGG-------VT-FDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       148 ~~~-------~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      +.+       .+ -..||++.......++.+.+.+++.|+.
T Consensus        75 l~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~  115 (296)
T PRK15461         75 LFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFS  115 (296)
T ss_pred             HcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence            321       11 2466777777888888888888887763

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.24  E-value=0.028  Score=52.13  Aligned_cols=94  Identities=17%  Similarity=0.220  Sum_probs=54.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe------EEEcChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK------TVWGDPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~D~~~l~~~  147 (349)
                      .++|.|+     |.|.+|..++..|+..|++|++++++.+...............+...+..      +..  ..+..+.
T Consensus         4 ~~~I~vI-----GaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~   76 (311)
T PRK06130          4 IQNLAII-----GAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM--EAGLAAA   76 (311)
T ss_pred             ccEEEEE-----CCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE--eCCHHHH
Confidence            4689999     56999999999999999999999987754432211000000000000000      001  1223444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHh
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~  176 (349)
                      ++++  |+||-+...+......++..+..
T Consensus        77 ~~~a--DlVi~av~~~~~~~~~v~~~l~~  103 (311)
T PRK06130         77 VSGA--DLVIEAVPEKLELKRDVFARLDG  103 (311)
T ss_pred             hccC--CEEEEeccCcHHHHHHHHHHHHH
Confidence            5554  88888877766555566654443

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=95.21  E-value=0.22  Score=45.17  Aligned_cols=91  Identities=22%  Similarity=0.197  Sum_probs=52.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEc-CCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+||.|+    |++|.+|+.+++.+.+ .+.+++++.. .......   ............++. +..|.+++   .  .
T Consensus         1 ~ikV~Ii----Ga~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~---~~~~~~~~~~~~gv~-~~~d~~~l---~--~   67 (266)
T TIGR00036         1 TIKVAVA----GAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQG---TDAGELAGIGKVGVP-VTDDLEAV---E--T   67 (266)
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccC---CCHHHhcCcCcCCce-eeCCHHHh---c--C
Confidence            3689999    9999999999999986 4788877654 3221100   000000001111221 22344444   1  2


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      .+|+||.+..  ......+++.|.+.|+
T Consensus        68 ~~DvVIdfT~--p~~~~~~~~~al~~g~   93 (266)
T TIGR00036        68 DPDVLIDFTT--PEGVLNHLKFALEHGV   93 (266)
T ss_pred             CCCEEEECCC--hHHHHHHHHHHHHCCC
Confidence            3699998874  3555666666766774

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.20  E-value=0.1  Score=49.14  Aligned_cols=99  Identities=18%  Similarity=0.236  Sum_probs=58.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+.+|||+    |+ |-+|...++.+...|.+|++++|......        +...+...+++.+..+.+++.+......
T Consensus       172 ~g~~vlI~----G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~--------~~~~~~~~Ga~~v~~~~~~~~~~~~~~~  238 (355)
T cd08230         172 NPRRALVL----GA-GPIGLLAALLLRLRGFEVYVLNRRDPPDP--------KADIVEELGATYVNSSKTPVAEVKLVGE  238 (355)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCeEEEEecCCCCHH--------HHHHHHHcCCEEecCCccchhhhhhcCC
Confidence            46789999    85 99999999888888999999998431111        1111112233332211122211111224


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +|+||.+.|... .....++.++..|  +++.++.
T Consensus       239 ~d~vid~~g~~~-~~~~~~~~l~~~G--~~v~~G~  270 (355)
T cd08230         239 FDLIIEATGVPP-LAFEALPALAPNG--VVILFGV  270 (355)
T ss_pred             CCEEEECcCCHH-HHHHHHHHccCCc--EEEEEec
Confidence            799999998432 3445566666655  6776664

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.19  E-value=0.066  Score=48.96  Aligned_cols=96  Identities=21%  Similarity=0.277  Sum_probs=63.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe--EEEc-ChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWG-DPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~-D~~~l~~~~~  149 (349)
                      .+++|-|+    |+.| +|.--++....-|++|+++++...+.++.          +...+.+  ++.. |++.++++.+
T Consensus       181 pG~~vgI~----GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea----------~~~LGAd~fv~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIV----GLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEA----------IKSLGADVFVDSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEe----cCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHH----------HHhcCcceeEEecCCHHHHHHHHH
Confidence            57899999    9998 99999999999999999999987433321          1112333  2333 6777777776


Q ss_pred             CCCccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..  |.++|+... .-.....+++++|..|  ++|+++-
T Consensus       246 ~~--dg~~~~v~~~a~~~~~~~~~~lk~~G--t~V~vg~  280 (360)
T KOG0023|consen  246 TT--DGGIDTVSNLAEHALEPLLGLLKVNG--TLVLVGL  280 (360)
T ss_pred             hh--cCcceeeeeccccchHHHHHHhhcCC--EEEEEeC
Confidence            65  555544331 1123445667777666  6888875

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.19  E-value=0.06  Score=49.83  Aligned_cols=101  Identities=20%  Similarity=0.210  Sum_probs=59.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~l~~~~~~~  151 (349)
                      |+||.|+    |+ |.+|..++..|...|. +|++++++++............. .......++.. +|   ++ .+.+.
T Consensus         2 ~~KI~VI----Ga-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d---~~-~~~~a   71 (307)
T PRK06223          2 RKKISII----GA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAA-PVEGFDTKITGTND---YE-DIAGS   71 (307)
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhh-hhcCCCcEEEeCCC---HH-HHCCC
Confidence            5799999    87 9999999999998875 99999997654432110000000 00001122221 23   33 35565


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                        |+||.+++.              |+...+.+++.+.+..-+ .+|..+
T Consensus        72 --DiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         72 --DVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             --CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence              999998863              344566666666655433 456555

>PRK14852 hypothetical protein; Provisional

Probab=95.18  E-value=0.17  Score=53.38  Aligned_cols=112  Identities=14%  Similarity=0.123  Sum_probs=71.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT-  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~-  136 (349)
                      ...+|+|+     |.|.+|..+++.|...|. ++++++.+.-....+..+......++              .++.+++ 
T Consensus       331 ~~srVlVv-----GlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~  405 (989)
T PRK14852        331 LRSRVAIA-----GLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIR  405 (989)
T ss_pred             hcCcEEEE-----CCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEE
Confidence            46789999     588999999999999986 67777765422222221111111111              1233433 


Q ss_pred             -EEc--ChhhHHhhhcCCCccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 -~~~--D~~~l~~~~~~~~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                       +..  +.+.++++++++  |+||.+... ..+..+.+.+.|++.++ .+|..+..+.+|
T Consensus       406 ~~~~~I~~en~~~fl~~~--DiVVDa~D~~~~~~rr~l~~~c~~~~I-P~I~ag~~G~~g  462 (989)
T PRK14852        406 SFPEGVAAETIDAFLKDV--DLLVDGIDFFALDIRRRLFNRALELGI-PVITAGPLGYSC  462 (989)
T ss_pred             EEecCCCHHHHHHHhhCC--CEEEECCCCccHHHHHHHHHHHHHcCC-CEEEeeccccCe
Confidence             322  367788888775  999987764 34455777888888886 678777655444

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.17  E-value=0.034  Score=54.68  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=69.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCC----------CCCcccceec----CCCeE-E
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP----------PFNRFNEIVS----AGGKT-V  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~----------~~~~~~~l~~----~~~~~-~  137 (349)
                      .+++|-++     |.|.+|+.+++.|++.||+|++.+|+.+..+++...          ......+...    +++-+ .
T Consensus         5 ~~~~IG~I-----GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~   79 (493)
T PLN02350          5 ALSRIGLA-----GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIIL   79 (493)
T ss_pred             CCCCEEEE-----eeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEE
Confidence            45679999     899999999999999999999999987655443211          0111112221    22211 2


Q ss_pred             EcChhhH----HhhhcCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          138 WGDPAEV----GNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       138 ~~D~~~l----~~~~~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ..|.+.+    +.++... +-|+||++...+...+..+.+.+++.|+ +||
T Consensus        80 v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi-~fl  129 (493)
T PLN02350         80 VKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGL-LYL  129 (493)
T ss_pred             CCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            2232222    2233322 2489999999999999999999998887 555

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.14  E-value=0.068  Score=48.82  Aligned_cols=37  Identities=30%  Similarity=0.373  Sum_probs=33.1

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~  111 (349)
                      ...+++|+|+    |.+|.+|+.++..|+++|..|++..|.
T Consensus       156 ~l~Gk~vvVi----G~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVV----GRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEE----CCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4568899999    999999999999999999999988873

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.13  E-value=0.2  Score=46.52  Aligned_cols=96  Identities=21%  Similarity=0.224  Sum_probs=61.6

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEE-cChhhHHhhhcC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVW-GDPAEVGNVVGG  150 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~D~~~l~~~~~~  150 (349)
                      ||.|+    |++|.+|..++..|..++.  +++.+++++.....         -++.+  ...++.. .+.+++.+.+++
T Consensus         1 KV~Ii----GaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a---------~DL~~~~~~~~i~~~~~~~~~~~~~~d   67 (312)
T TIGR01772         1 KVAVL----GAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVA---------ADLSHIPTAASVKGFSGEEGLENALKG   67 (312)
T ss_pred             CEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEE---------chhhcCCcCceEEEecCCCchHHHcCC
Confidence            68999    9999999999999988875  79999887621111         11111  1122221 122335566777


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                      .  |+||-++|.              |..-.+.+.+.+++.+-+ .+|.+|
T Consensus        68 a--DivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        68 A--DVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             C--CEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            6  999999983              455677777777776643 345444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.10  E-value=0.11  Score=47.76  Aligned_cols=96  Identities=25%  Similarity=0.326  Sum_probs=63.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~l~~~  147 (349)
                      ...+|+|+    |++|-+|..+++.+...|.+|++++++.+....+.           ..+++ ++..+    ...+...
T Consensus       144 ~~~~vli~----g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  208 (328)
T cd08268         144 PGDSVLIT----AASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-----------ALGAAHVIVTDEEDLVAEVLRI  208 (328)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----------HcCCCEEEecCCccHHHHHHHH
Confidence            45689999    99999999999999999999999988764332211           11111 11112    2233444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+..+|.++++.+.  ......++.++..|  +++.++.
T Consensus       209 ~~~~~~d~vi~~~~~--~~~~~~~~~l~~~g--~~v~~g~  244 (328)
T cd08268         209 TGGKGVDVVFDPVGG--PQFAKLADALAPGG--TLVVYGA  244 (328)
T ss_pred             hCCCCceEEEECCch--HhHHHHHHhhccCC--EEEEEEe
Confidence            444458999998885  44566666666555  7887764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.09  E-value=0.12  Score=47.99  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=63.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEcCh----hhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDP----AEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D~----~~l~~~  147 (349)
                      .+.+|||.    |++|-+|..+++.+...|.+|++++++++....+.           ..+++ ++..+.    +.+...
T Consensus       139 ~~~~vlI~----ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~v~~~~~~~~~~~~~~~  203 (329)
T cd08250         139 SGETVLVT----AAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-----------SLGCDRPINYKTEDLGEVLKKE  203 (329)
T ss_pred             CCCEEEEE----eCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-----------HcCCceEEeCCCccHHHHHHHh
Confidence            45789999    99999999999999999999999988764433211           11221 122221    223322


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      . +..+|.|+++.+.  ......++.++..|  +||.+++..
T Consensus       204 ~-~~~vd~v~~~~g~--~~~~~~~~~l~~~g--~~v~~g~~~  240 (329)
T cd08250         204 Y-PKGVDVVYESVGG--EMFDTCVDNLALKG--RLIVIGFIS  240 (329)
T ss_pred             c-CCCCeEEEECCcH--HHHHHHHHHhccCC--eEEEEeccc
Confidence            2 2347999999884  45566677776655  788887654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14851 hypothetical protein; Provisional

Probab=95.09  E-value=0.21  Score=51.19  Aligned_cols=109  Identities=17%  Similarity=0.200  Sum_probs=67.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCe--
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGK--  135 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~--  135 (349)
                      ...+|+|+     |.|.+|+.+++.|...|. ++++++.+.-....+..+......++              .++.++  
T Consensus        42 ~~~~VlIv-----G~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~  116 (679)
T PRK14851         42 AEAKVAIP-----GMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEIT  116 (679)
T ss_pred             hcCeEEEE-----CcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEE
Confidence            46799999     588999999999999996 67777765422222221111111111              012333  


Q ss_pred             EEEcC--hhhHHhhhcCCCccEEEeCCCCC-hhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          136 TVWGD--PAEVGNVVGGVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       136 ~~~~D--~~~l~~~~~~~~~d~Vi~~a~~~-~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      .+...  .+.+.+++.++  |+||.+.... ++.-..+.+.|++.++ .+|..+..+
T Consensus       117 ~~~~~i~~~n~~~~l~~~--DvVid~~D~~~~~~r~~l~~~c~~~~i-P~i~~g~~G  170 (679)
T PRK14851        117 PFPAGINADNMDAFLDGV--DVVLDGLDFFQFEIRRTLFNMAREKGI-PVITAGPLG  170 (679)
T ss_pred             EEecCCChHHHHHHHhCC--CEEEECCCCCcHHHHHHHHHHHHHCCC-CEEEeeccc
Confidence            33332  56778888775  9999887642 4445577778888887 566655433

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.01  E-value=0.061  Score=52.39  Aligned_cols=36  Identities=28%  Similarity=0.448  Sum_probs=33.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~  114 (349)
                      |+|+|+    ||.|.+|..+++.|.+.|++|++++|+++.
T Consensus         1 MkI~II----GG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          1 MKISII----GGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             CEEEEE----ecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            579999    999999999999999999999999998654

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.00  E-value=0.24  Score=43.98  Aligned_cols=109  Identities=19%  Similarity=0.224  Sum_probs=67.6

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCe--EEE
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGK--TVW  138 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~--~~~  138 (349)
                      ||||+     |.|.+|.++++.|...|. ++++++.+.-+...+..+-+-+-.++              ..++++  ...
T Consensus         1 kVlvv-----G~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~   75 (234)
T cd01484           1 KVLLV-----GAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQ   75 (234)
T ss_pred             CEEEE-----CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEe
Confidence            58999     589999999999999996 68888876533332222211111111              112333  333


Q ss_pred             cCh---hhH-HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          139 GDP---AEV-GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       139 ~D~---~~l-~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      .+.   .+. ...+++  +|+||.+.. |+..-..+-+.|.+.++ .||..++.+.+|.
T Consensus        76 ~~i~~~~~~~~~f~~~--~DvVi~a~D-n~~aR~~ln~~c~~~~i-plI~~g~~G~~G~  130 (234)
T cd01484          76 NKVGPEQDFNDTFFEQ--FHIIVNALD-NIIARRYVNGMLIFLIV-PLIESGTEGFKGN  130 (234)
T ss_pred             ccCChhhhchHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEcccCCceE
Confidence            332   222 344555  599998765 56666667778888875 7888887776664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=94.99  E-value=0.13  Score=46.96  Aligned_cols=97  Identities=22%  Similarity=0.285  Sum_probs=61.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~l~~~  147 (349)
                      .+.+|+|+    |++|-+|..+++.+...|.+|++++++.+..+.+.           ..+++ ++...    .+.+...
T Consensus       139 ~~~~vlv~----g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  203 (323)
T cd05276         139 AGETVLIH----GGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-----------ALGADVAINYRTEDFAEEVKEA  203 (323)
T ss_pred             CCCEEEEE----cCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----------HcCCCEEEeCCchhHHHHHHHH
Confidence            46799999    99999999999999999999999988754332111           01111 11111    2333344


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|.++++.+...  ....++.++..|  +++.++..
T Consensus       204 ~~~~~~d~vi~~~g~~~--~~~~~~~~~~~g--~~i~~~~~  240 (323)
T cd05276         204 TGGRGVDVILDMVGGDY--LARNLRALAPDG--RLVLIGLL  240 (323)
T ss_pred             hCCCCeEEEEECCchHH--HHHHHHhhccCC--EEEEEecC
Confidence            44445899999988433  344455555444  68777653

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK05678 succinyl-CoA synthetase subunit alpha; Validated

Probab=94.94  E-value=0.32  Score=44.56  Aligned_cols=114  Identities=17%  Similarity=0.228  Sum_probs=68.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEE-EEEcC--CCCcccCCCCCCCcccceecC---CCeEEEcC----hh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVG--DENSDKMKKPPFNRFNEIVSA---GGKTVWGD----PA  142 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~-~l~R~--~~~~~~~~~~~~~~~~~l~~~---~~~~~~~D----~~  142 (349)
                      ++.||+|.    |-||.+|..+.+.|++-|++++ .+..+  .+....++  -+..+.++...   ++-++...    ++
T Consensus         7 ~~~~~~v~----~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~v~G~~--~y~sv~dlp~~~~~DlAvi~vp~~~v~~   80 (291)
T PRK05678          7 KDTKVIVQ----GITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTTVLGLP--VFNTVAEAVEATGANASVIYVPPPFAAD   80 (291)
T ss_pred             CCCeEEEe----CCCchHHHHHHHHHHHCCCCEEEEECCCCCCCeEeCee--ccCCHHHHhhccCCCEEEEEcCHHHHHH
Confidence            45689999    9999999999999999888633 33332  22221111  12233344332   33333333    34


Q ss_pred             hHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      .++++.+.----+||..+|...+..+.+++.+++.|+ |++=..+.+++..
T Consensus        81 ~l~e~~~~gvk~avI~s~Gf~~~~~~~l~~~a~~~gi-rvlGPNc~Gi~~~  130 (291)
T PRK05678         81 AILEAIDAGIDLIVCITEGIPVLDMLEVKAYLERKKT-RLIGPNCPGIITP  130 (291)
T ss_pred             HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC-EEECCCCCccccc
Confidence            4444443221355667777665555688889998887 7887777776554

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.93  E-value=0.15  Score=47.54  Aligned_cols=94  Identities=21%  Similarity=0.287  Sum_probs=64.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D~~~l~~~~~  149 (349)
                      ..+++|+|+    |.. .+|...++.+...|.+|++++|++++.+..+           ..+.+.+.  .|.+..+.+-+
T Consensus       165 ~pG~~V~I~----G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-----------~lGAd~~i~~~~~~~~~~~~~  228 (339)
T COG1064         165 KPGKWVAVV----GAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-----------KLGADHVINSSDSDALEAVKE  228 (339)
T ss_pred             CCCCEEEEE----CCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-----------HhCCcEEEEcCCchhhHHhHh
Confidence            357899999    655 9999999999889999999999986553211           12333322  24444444443


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .  +|+||.+++  -....+.+++++..|  +++.++-
T Consensus       229 ~--~d~ii~tv~--~~~~~~~l~~l~~~G--~~v~vG~  260 (339)
T COG1064         229 I--ADAIIDTVG--PATLEPSLKALRRGG--TLVLVGL  260 (339)
T ss_pred             h--CcEEEECCC--hhhHHHHHHHHhcCC--EEEEECC
Confidence            3  699999999  445566677777766  6777664

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=94.92  E-value=0.18  Score=47.20  Aligned_cols=95  Identities=16%  Similarity=0.149  Sum_probs=57.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ++++|.|+    ||||++|..+++.|.++.|   +++.+.......+.+.         +....+.+.  +.+..  .+.
T Consensus         3 ~~~~vaIv----GATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~---------~~~~~~~v~--~~~~~--~~~   65 (336)
T PRK08040          3 EGWNIALL----GATGAVGEALLELLAERQFPVGELYALASEESAGETLR---------FGGKSVTVQ--DAAEF--DWS   65 (336)
T ss_pred             CCCEEEEE----ccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE---------ECCcceEEE--eCchh--hcc
Confidence            46799999    9999999999999988543   6766755432222111         111112221  22221  123


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      +  +|+|+.+++..  ....++..+.+.|+ ++|=.|+..
T Consensus        66 ~--~Dvvf~a~p~~--~s~~~~~~~~~~g~-~VIDlS~~f  100 (336)
T PRK08040         66 Q--AQLAFFVAGRE--ASAAYAEEATNAGC-LVIDSSGLF  100 (336)
T ss_pred             C--CCEEEECCCHH--HHHHHHHHHHHCCC-EEEECChHh
Confidence            3  59999888644  45566666666675 677677643

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=94.92  E-value=0.13  Score=47.05  Aligned_cols=97  Identities=16%  Similarity=0.251  Sum_probs=61.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE--EcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV--WGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~D---~~~l~~~  147 (349)
                      .+++|+|+    |++|-+|..+++.+...|.+|++++++.+..+.+.           ..+++.+  ..+   .+.+.+.
T Consensus       144 ~g~~vlI~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  208 (325)
T cd08253         144 AGETVLVH----GGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-----------QAGADAVFNYRAEDLADRILAA  208 (325)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeCCCcCHHHHHHHH
Confidence            46799999    99999999999999999999999998764332211           1122111  112   2333344


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|.|+++++..  ......+..+..  .+|+.+++.
T Consensus       209 ~~~~~~d~vi~~~~~~--~~~~~~~~l~~~--g~~v~~~~~  245 (325)
T cd08253         209 TAGQGVDVIIEVLANV--NLAKDLDVLAPG--GRIVVYGSG  245 (325)
T ss_pred             cCCCceEEEEECCchH--HHHHHHHhhCCC--CEEEEEeec
Confidence            4444589999998753  233334444433  478877764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.91  E-value=0.043  Score=50.38  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=33.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      .++|.|+     |.|.+|..++..|+..|++|++.+|+++..+
T Consensus         4 ~~kI~vI-----GaG~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (292)
T PRK07530          4 IKKVGVI-----GAGQMGNGIAHVCALAGYDVLLNDVSADRLE   41 (292)
T ss_pred             CCEEEEE-----CCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4689999     6799999999999999999999999875543

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=94.91  E-value=0.063  Score=50.58  Aligned_cols=79  Identities=19%  Similarity=0.307  Sum_probs=51.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC----cccceecCCCe---EEEcChhhHHhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN----RFNEIVSAGGK---TVWGDPAEVGNV  147 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~----~~~~l~~~~~~---~~~~D~~~l~~~  147 (349)
                      |||.|+     |+||+|.-..--|.+.||+|++++.++++.+.+.+-..+    .+.++...+..   +..  -.+++++
T Consensus         1 MkI~vi-----GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f--Ttd~~~a   73 (414)
T COG1004           1 MKITVI-----GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF--TTDYEEA   73 (414)
T ss_pred             CceEEE-----CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE--EcCHHHH
Confidence            689999     899999999999999999999999987665544322111    12233222221   000  2345556


Q ss_pred             hcCCCccEEEeCCCC
Q 018900          148 VGGVTFDVVLDNNGK  162 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~  162 (349)
                      +++.  |+++-+.|.
T Consensus        74 ~~~a--dv~fIavgT   86 (414)
T COG1004          74 VKDA--DVVFIAVGT   86 (414)
T ss_pred             HhcC--CEEEEEcCC
Confidence            6555  888877663

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=94.91  E-value=0.24  Score=47.97  Aligned_cols=111  Identities=22%  Similarity=0.290  Sum_probs=68.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCc---------------ccceecCCCe-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR---------------FNEIVSAGGK-  135 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~---------------~~~l~~~~~~-  135 (349)
                      +..+|||+    |++| +|..+++-|+..|. .+++++...-....+...-+..               +.++ .+.++ 
T Consensus        19 ~~s~Vlli----G~gg-lGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eL-Np~V~i   92 (425)
T cd01493          19 ESAHVCLL----NATA-TGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQEL-NPDVNG   92 (425)
T ss_pred             hhCeEEEE----cCcH-HHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHH-CCCCEE
Confidence            45689999    7655 99999999999996 6888886542222222111111               1111 23343 


Q ss_pred             -EEEcChhh----HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          136 -TVWGDPAE----VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       136 -~~~~D~~~----l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                       ++..+++.    ..+.+..  +|+||.+.. +......+.+.|++.++ .||+.++.|.||.
T Consensus        93 ~~~~e~~~~ll~~~~~f~~~--fdiVI~t~~-~~~~~~~L~~~c~~~~i-PlI~~~s~G~~G~  151 (425)
T cd01493          93 SAVEESPEALLDNDPSFFSQ--FTVVIATNL-PESTLLRLADVLWSANI-PLLYVRSYGLYGY  151 (425)
T ss_pred             EEEecccchhhhhHHHHhcC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEecccCEEE
Confidence             33333322    2344555  499986433 45555667888998886 7999999998874

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=94.89  E-value=0.075  Score=52.68  Aligned_cols=105  Identities=20%  Similarity=0.225  Sum_probs=62.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCC------CCCccc--ceecCC-CeEEEcChhhH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP------PFNRFN--EIVSAG-GKTVWGDPAEV  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~------~~~~~~--~l~~~~-~~~~~~D~~~l  144 (349)
                      .++|.|+     |.|.+|..++..|+..|++|++.+++++..+.+...      ....+.  .+...+ +++    .+++
T Consensus         4 i~kIavI-----G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~----~~~~   74 (495)
T PRK07531          4 IMKAACI-----GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF----CASL   74 (495)
T ss_pred             cCEEEEE-----CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe----eCCH
Confidence            3589999     799999999999999999999999987654322100      000000  000011 111    1345


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEecccc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAG  189 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~Ss~~  189 (349)
                      .++++++  |+|+-+...+.+..+.++..+... .-..+|-.||.+
T Consensus        75 ~ea~~~a--D~Vieavpe~~~vk~~l~~~l~~~~~~~~iI~SsTsg  118 (495)
T PRK07531         75 AEAVAGA--DWIQESVPERLDLKRRVLAEIDAAARPDALIGSSTSG  118 (495)
T ss_pred             HHHhcCC--CEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence            5666665  999988887766555555433332 222355555544

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.88  E-value=0.086  Score=50.85  Aligned_cols=67  Identities=19%  Similarity=0.224  Sum_probs=47.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+    | .|.+|+.+++.|...|.+|++.++++.....           ....++++.  +   +++++.+. 
T Consensus       211 ~Gk~VlVi----G-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~-----------A~~~G~~v~--~---l~eal~~a-  268 (425)
T PRK05476        211 AGKVVVVA----G-YGDVGKGCAQRLRGLGARVIVTEVDPICALQ-----------AAMDGFRVM--T---MEEAAELG-  268 (425)
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHH-----------HHhcCCEec--C---HHHHHhCC-
Confidence            57899999    5 6999999999999999999999987643321           111133322  2   34555554 


Q ss_pred             ccEEEeCCCC
Q 018900          153 FDVVLDNNGK  162 (349)
Q Consensus       153 ~d~Vi~~a~~  162 (349)
                       |+||.+.+.
T Consensus       269 -DVVI~aTG~  277 (425)
T PRK05476        269 -DIFVTATGN  277 (425)
T ss_pred             -CEEEECCCC
Confidence             999998764

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.88  E-value=0.15  Score=45.47  Aligned_cols=98  Identities=19%  Similarity=0.366  Sum_probs=61.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcChhhHHh--h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGDPAEVGN--V  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D~~~l~~--~  147 (349)
                      ..+.+|||+    |+++ +|..+++.+...|.+|++++++++..+.+..           .+.+. + ..+.+....  .
T Consensus       133 ~~~~~vli~----g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~  196 (271)
T cd05188         133 KPGDTVLVL----GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-----------LGADHVIDYKEEDLEEELRL  196 (271)
T ss_pred             CCCCEEEEE----CCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-----------hCCceeccCCcCCHHHHHHH
Confidence            346789999    9999 9999999999999999999987643322111           11111 1 111111111  2


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .....+|.|+++++.. .....+++.++..|  +++.++..
T Consensus       197 ~~~~~~d~vi~~~~~~-~~~~~~~~~l~~~G--~~v~~~~~  234 (271)
T cd05188         197 TGGGGADVVIDAVGGP-ETLAQALRLLRPGG--RIVVVGGT  234 (271)
T ss_pred             hcCCCCCEEEECCCCH-HHHHHHHHhcccCC--EEEEEccC
Confidence            2333589999998852 34555666666554  68877764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.82  E-value=0.05  Score=47.11  Aligned_cols=111  Identities=18%  Similarity=0.242  Sum_probs=66.2

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ...+|+|+|+    | .|.+|+++++.|.+.|++|++.+++.+....+.        +.  .+.+.+  +.+   +++. 
T Consensus        25 ~l~gk~v~I~----G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~--------~~--~g~~~v--~~~---~l~~-   83 (200)
T cd01075          25 SLEGKTVAVQ----G-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAA--------EL--FGATVV--APE---EIYS-   83 (200)
T ss_pred             CCCCCEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HH--cCCEEE--cch---hhcc-
Confidence            3457899999    5 579999999999999999999888764332211        00  023322  222   2222 


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                      .++|+++.++..++....++    ++.+.+.++ -..      +  .|+.+          ...++++++.|+.+
T Consensus        84 ~~~Dv~vp~A~~~~I~~~~~----~~l~~~~v~-~~A------N--~~~~~----------~~~~~~L~~~Gi~~  135 (200)
T cd01075          84 VDADVFAPCALGGVINDDTI----PQLKAKAIA-GAA------N--NQLAD----------PRHGQMLHERGILY  135 (200)
T ss_pred             ccCCEEEecccccccCHHHH----HHcCCCEEE-ECC------c--CccCC----------HhHHHHHHHCCCEE
Confidence            14699998887654444333    333443333 111      1  12221          46788999988755

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.81  E-value=0.11  Score=47.95  Aligned_cols=103  Identities=22%  Similarity=0.313  Sum_probs=63.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccceecC--CCeEEE---cChhhHH-
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVSA--GGKTVW---GDPAEVG-  145 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~l~~~--~~~~~~---~D~~~l~-  145 (349)
                      |+|.|+     |.|.+|..+++.|++.|++|++.+|+++..+.+......   ...++...  ..+++.   -+.+.+. 
T Consensus         1 m~Ig~I-----GlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~   75 (299)
T PRK12490          1 MKLGLI-----GLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTES   75 (299)
T ss_pred             CEEEEE-----cccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHH
Confidence            379999     699999999999999999999999986544332211111   11122111  011211   1222222 


Q ss_pred             ---hhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          146 ---NVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       146 ---~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                         .+....+ -.+||++.......++.+.+.+++.|+ +|+
T Consensus        76 v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~-~~v  116 (299)
T PRK12490         76 VIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGI-HYV  116 (299)
T ss_pred             HHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCC-eEE
Confidence               2222222 368888888888888888888888775 444

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.81  E-value=0.11  Score=50.03  Aligned_cols=89  Identities=17%  Similarity=0.141  Sum_probs=58.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+     |.|.+|..+++.+...|.+|+++++++.....           ....+++.+  +   +++++.+  
T Consensus       201 ~GktVvVi-----G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~-----------A~~~G~~~~--~---~~e~v~~--  257 (413)
T cd00401         201 AGKVAVVA-----GYGDVGKGCAQSLRGQGARVIVTEVDPICALQ-----------AAMEGYEVM--T---MEEAVKE--  257 (413)
T ss_pred             CCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEECChhhHHH-----------HHhcCCEEc--c---HHHHHcC--
Confidence            57899999     78999999999999999999998887643321           112244333  2   2344554  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .|+||.+.|..-.-....++.++..+  .++.++
T Consensus       258 aDVVI~atG~~~~i~~~~l~~mk~Gg--ilvnvG  289 (413)
T cd00401         258 GDIFVTTTGNKDIITGEHFEQMKDGA--IVCNIG  289 (413)
T ss_pred             CCEEEECCCCHHHHHHHHHhcCCCCc--EEEEeC
Confidence            49999988753322233455555433  577776

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.81  E-value=0.031  Score=51.10  Aligned_cols=102  Identities=15%  Similarity=0.201  Sum_probs=59.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC-------------CCeEEEcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-------------GGKTVWGD  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~D  140 (349)
                      +++|.|+     |.|.+|..++..|+..|++|++++++++..++........+..+...             ++. ...|
T Consensus         3 ~~kI~VI-----G~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~-~~~~   76 (282)
T PRK05808          3 IQKIGVI-----GAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARIT-GTTD   76 (282)
T ss_pred             ccEEEEE-----ccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE-EeCC
Confidence            4689999     56999999999999999999999987754421000000000011111             111 1123


Q ss_pred             hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEecc
Q 018900          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (349)
Q Consensus       141 ~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~Ss  187 (349)
                      .   +. +.++  |+||-+...+....+.+++.+.+. +-..+|-.++
T Consensus        77 ~---~~-~~~a--DlVi~av~e~~~~k~~~~~~l~~~~~~~~il~s~t  118 (282)
T PRK05808         77 L---DD-LKDA--DLVIEAATENMDLKKKIFAQLDEIAKPEAILATNT  118 (282)
T ss_pred             H---HH-hccC--CeeeecccccHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            2   22 3444  999998888877777777766543 3334553333

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.80  E-value=0.14  Score=47.19  Aligned_cols=97  Identities=24%  Similarity=0.281  Sum_probs=64.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEc-C---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWG-D---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-D---~~~l~~~  147 (349)
                      ...+|||+    |++|-+|..+++.+...|.+|++++++.+....+.           ..++.. +.. +   .+.+...
T Consensus       142 ~~~~vlI~----g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  206 (324)
T cd08244         142 PGDVVLVT----AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-----------ALGADVAVDYTRPDWPDQVREA  206 (324)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCCEEEecCCccHHHHHHHH
Confidence            35689999    99999999999999999999999988765432211           112221 211 2   2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|.|+++.+..  .....+++++..|  ++|.++..
T Consensus       207 ~~~~~~d~vl~~~g~~--~~~~~~~~l~~~g--~~v~~g~~  243 (324)
T cd08244         207 LGGGGVTVVLDGVGGA--IGRAALALLAPGG--RFLTYGWA  243 (324)
T ss_pred             cCCCCceEEEECCChH--hHHHHHHHhccCc--EEEEEecC
Confidence            4444589999998854  2366677776655  78877653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=94.79  E-value=0.19  Score=45.14  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=27.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC---CCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS---GHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~---g~~V~~l~R~~  112 (349)
                      |.+||-|+     |.|.||+.++++|.+.   ++++.++.+..
T Consensus         1 ~~~rvgiI-----G~GaIG~~va~~l~~~~~~~~~l~~V~~~~   38 (267)
T PRK13301          1 MTHRIAFI-----GLGAIASDVAAGLLADAAQPCQLAALTRNA   38 (267)
T ss_pred             CceEEEEE-----CccHHHHHHHHHHhcCCCCceEEEEEecCC
Confidence            45789999     8999999999999764   36776665543

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=94.78  E-value=0.15  Score=46.86  Aligned_cols=99  Identities=17%  Similarity=0.257  Sum_probs=62.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEEE---cChhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTVW---GDPAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~~---~D~~~l~~~~  148 (349)
                      |+|.++     |.|.+|..+++.|++.||+|++.+|.+. .+.+........   .+.. ...+++.   -|.+.+++.+
T Consensus         1 m~Ig~I-----GlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~-~~advVi~~v~~~~~v~~v~   73 (292)
T PRK15059          1 MKLGFI-----GLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVT-EASDIIFIMVPDTPQVEEVL   73 (292)
T ss_pred             CeEEEE-----ccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHH-hcCCEEEEeCCChHHHHHHH
Confidence            369999     7999999999999999999999988753 222211111011   1111 1222221   1334444443


Q ss_pred             cC-------CC-ccEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          149 GG-------VT-FDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       149 ~~-------~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      .+       .. -.+||++.......++.+.+.+++.|+.
T Consensus        74 ~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~  113 (292)
T PRK15059         74 FGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGD  113 (292)
T ss_pred             cCCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence            21       11 3678899998888899999999888863

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.76  E-value=0.2  Score=46.54  Aligned_cols=76  Identities=14%  Similarity=0.190  Sum_probs=53.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..+++|.|+     |.|.||+.+++.|...|.+|++.+|..+...                ++..+ ...+++++++.+.
T Consensus       134 l~g~tvgIv-----G~G~IG~~vA~~l~afG~~V~~~~~~~~~~~----------------~~~~~-~~~~~l~e~l~~a  191 (312)
T PRK15469        134 REDFTIGIL-----GAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP----------------GVQSF-AGREELSAFLSQT  191 (312)
T ss_pred             cCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC----------------Cceee-cccccHHHHHhcC
Confidence            356899999     8999999999999999999999998653221                11111 1245788888776


Q ss_pred             CccEEEeCCCCChhhHHHHHH
Q 018900          152 TFDVVLDNNGKNLDAVRPVAD  172 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~  172 (349)
                        |+|+.+...+ ..++.+++
T Consensus       192 --Dvvv~~lPlt-~~T~~li~  209 (312)
T PRK15469        192 --RVLINLLPNT-PETVGIIN  209 (312)
T ss_pred             --CEEEECCCCC-HHHHHHhH
Confidence              8888766643 23444443

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.75  E-value=0.19  Score=48.62  Aligned_cols=39  Identities=36%  Similarity=0.548  Sum_probs=34.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~  118 (349)
                      |+|.|+     |.|++|..++..|.+.||+|++.+++++..+.+
T Consensus         1 mkI~vI-----GlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l   39 (411)
T TIGR03026         1 MKIAVI-----GLGYVGLPLAALLADLGHEVTGVDIDQEKVDKL   39 (411)
T ss_pred             CEEEEE-----CCCchhHHHHHHHHhcCCeEEEEECCHHHHHHh
Confidence            479999     789999999999999999999999987655544

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.69  E-value=0.42  Score=44.89  Aligned_cols=93  Identities=17%  Similarity=0.179  Sum_probs=58.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHh-CCCe---EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~---V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      .++|-|+    ||||++|+.+++.|.+ ..++   +..+.........+         .+....+.+...|++++    .
T Consensus         5 ~~~VaIv----GATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~---------~~~~~~l~v~~~~~~~~----~   67 (347)
T PRK06728          5 GYHVAVV----GATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV---------QFKGREIIIQEAKINSF----E   67 (347)
T ss_pred             CCEEEEE----eCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe---------eeCCcceEEEeCCHHHh----c
Confidence            4689999    9999999999999985 5666   55565443222211         11112334444454433    3


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +  +|+|+.+++..  ..+.+...+.+.|. .+|=.|+.
T Consensus        68 ~--~Divf~a~~~~--~s~~~~~~~~~~G~-~VID~Ss~  101 (347)
T PRK06728         68 G--VDIAFFSAGGE--VSRQFVNQAVSSGA-IVIDNTSE  101 (347)
T ss_pred             C--CCEEEECCChH--HHHHHHHHHHHCCC-EEEECchh
Confidence            3  59999988744  55666776666774 56666663

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.68  E-value=0.14  Score=47.96  Aligned_cols=96  Identities=15%  Similarity=0.287  Sum_probs=60.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~l~~~~~~  150 (349)
                      .+.+|||+    |+ |-+|...++.+...|. +|++++++++..+..+           ..+.+.+. .+.+++.+....
T Consensus       169 ~g~~VlV~----G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~~  232 (343)
T PRK09880        169 QGKRVFVS----GV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-----------EMGADKLVNPQNDDLDHYKAE  232 (343)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-----------HcCCcEEecCCcccHHHHhcc
Confidence            36789999    86 9999999998888898 6888888765443211           12332221 112223333332


Q ss_pred             C-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          151 V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       151 ~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      . .+|+||.+.|.. ......+++++..|  +++.++.
T Consensus       233 ~g~~D~vid~~G~~-~~~~~~~~~l~~~G--~iv~~G~  267 (343)
T PRK09880        233 KGYFDVSFEVSGHP-SSINTCLEVTRAKG--VMVQVGM  267 (343)
T ss_pred             CCCCCEEEECCCCH-HHHHHHHHHhhcCC--EEEEEcc
Confidence            2 379999999853 23455667776655  6887763

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.66  E-value=0.16  Score=47.10  Aligned_cols=95  Identities=23%  Similarity=0.307  Sum_probs=58.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCccc----CCCCCCCcccceecCCCeEEEcChhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDK----MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~  148 (349)
                      |||.|+    |+ |.+|..++..|..+|  .+|++++++.+....    +....     ... ....+..+|.+    .+
T Consensus         1 mkI~II----Ga-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~-----~~~-~~~~i~~~d~~----~l   65 (308)
T cd05292           1 MKVAIV----GA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGT-----PFV-KPVRIYAGDYA----DC   65 (308)
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccc-----ccc-CCeEEeeCCHH----Hh
Confidence            479999    76 999999999999999  689999998754432    11110     000 11233333432    25


Q ss_pred             cCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                      .+.  |+||-+++.              |....+.+++.+++.+-+ .++..+
T Consensus        66 ~~a--DiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          66 KGA--DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             CCC--CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            555  999999884              334455666666665533 344443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=94.66  E-value=0.038  Score=50.85  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=32.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      .++|.|+     |.|.+|..++..|+..|++|++.+++.+..
T Consensus         4 ~~~V~vI-----G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~   40 (295)
T PLN02545          4 IKKVGVV-----GAGQMGSGIAQLAAAAGMDVWLLDSDPAAL   40 (295)
T ss_pred             cCEEEEE-----CCCHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence            4689999     679999999999999999999999987544

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.64  E-value=0.2  Score=47.32  Aligned_cols=96  Identities=16%  Similarity=0.241  Sum_probs=61.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-c---C-hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G---D-PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---D-~~~l~~  146 (349)
                      .+.+|||.    |+ |-+|..+++.+...|.+ |++++++++..+.+           ...+.+.+. .   | .+.+.+
T Consensus       176 ~g~~VlV~----G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-----------~~~Ga~~~i~~~~~~~~~~i~~  239 (358)
T TIGR03451       176 RGDSVAVI----GC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-----------REFGATHTVNSSGTDPVEAIRA  239 (358)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-----------HHcCCceEEcCCCcCHHHHHHH
Confidence            46799999    85 99999999999889985 88888876443211           111222211 1   1 233444


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ...+.++|+|+++.|.. ......++.++..|  +++.++.
T Consensus       240 ~~~~~g~d~vid~~g~~-~~~~~~~~~~~~~G--~iv~~G~  277 (358)
T TIGR03451       240 LTGGFGADVVIDAVGRP-ETYKQAFYARDLAG--TVVLVGV  277 (358)
T ss_pred             HhCCCCCCEEEECCCCH-HHHHHHHHHhccCC--EEEEECC
Confidence            44444589999999853 23445566666655  6887764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below)

Probab=94.64  E-value=0.16  Score=39.42  Aligned_cols=92  Identities=14%  Similarity=0.082  Sum_probs=56.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--------cChhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--------GDPAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~D~~~l  144 (349)
                      |-+||||.     +.|-++..+++.+.+.|++++++..+++....         +....+.+-...        .|.+.+
T Consensus         1 ~ikkvLIa-----nrGeia~r~~ra~r~~Gi~tv~v~s~~d~~s~---------~~~~ad~~~~~~~~~~~~~yl~~e~I   66 (110)
T PF00289_consen    1 MIKKVLIA-----NRGEIAVRIIRALRELGIETVAVNSNPDTVST---------HVDMADEAYFEPPGPSPESYLNIEAI   66 (110)
T ss_dssp             SSSEEEES-----S-HHHHHHHHHHHHHTTSEEEEEEEGGGTTGH---------HHHHSSEEEEEESSSGGGTTTSHHHH
T ss_pred             CCCEEEEE-----CCCHHHHHHHHHHHHhCCcceeccCchhcccc---------cccccccceecCcchhhhhhccHHHH
Confidence            34789999     79999999999999999999999887654321         000011122222        355666


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      -++.+..++|.+. -.--.+.....+.+.+.+.|+
T Consensus        67 ~~ia~~~g~~~i~-pGyg~lse~~~fa~~~~~~gi  100 (110)
T PF00289_consen   67 IDIARKEGADAIH-PGYGFLSENAEFAEACEDAGI  100 (110)
T ss_dssp             HHHHHHTTESEEE-STSSTTTTHHHHHHHHHHTT-
T ss_pred             hhHhhhhcCcccc-cccchhHHHHHHHHHHHHCCC
Confidence            6666555566653 222334555667777777775

CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=94.63  E-value=0.32  Score=44.00  Aligned_cols=92  Identities=17%  Similarity=0.243  Sum_probs=58.3

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC-CCCcccCCCCCCCcccceecCCCeEEE-cC-hhhHHhhhcCCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGGKTVW-GD-PAEVGNVVGGVT  152 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~-~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D-~~~l~~~~~~~~  152 (349)
                      +|+|.    |++|.+|+.+++.+.+.+.++++..-. ......        ..++...++.++- .| ..++..++.. .
T Consensus         2 ~V~V~----Ga~GkMG~~v~~av~~~~~~Lv~~~~~~~~~~~~--------~~~~~g~~v~v~~~~~~~~~l~~~~~~-~   68 (275)
T TIGR02130         2 QIMVN----GCPGKMGKAVAEAADAAGLEIVPTSFGGEEEAEN--------EAEVAGKEILLHGPSEREARIGEVFAK-Y   68 (275)
T ss_pred             eEEEe----CCCChHHHHHHHHHhcCCCEEEeeEccccccccc--------hhhhcccceeeeccccccccHHHHHhh-c
Confidence            79999    999999999999999989998875221 111111        1122222333321 12 4566666644 2


Q ss_pred             cc-EEEeCCCCChhhHHHHHHHHHhCCCcEE
Q 018900          153 FD-VVLDNNGKNLDAVRPVADWAKSSGVKQF  182 (349)
Q Consensus       153 ~d-~Vi~~a~~~~~~~~~ll~~a~~~gv~~~  182 (349)
                      +| ++|++.-  -+.+...+++|.+.|+.-+
T Consensus        69 ~d~VvIDFT~--P~~~~~n~~~~~~~gv~~V   97 (275)
T TIGR02130        69 PELICIDYTH--PSAVNDNAAFYGKHGIPFV   97 (275)
T ss_pred             CCEEEEECCC--hHHHHHHHHHHHHCCCCEE
Confidence            68 8999876  3455666888888887433

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=94.62  E-value=0.095  Score=47.66  Aligned_cols=71  Identities=18%  Similarity=0.137  Sum_probs=55.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..+|||..     |+|-+|+.++-++-..|.+|++++|-...+.-          +..+...-+...|.+.+..+++..+
T Consensus        11 ~a~kvmLL-----GSGELGKEvaIe~QRLG~eViAVDrY~~APAm----------qVAhrs~Vi~MlD~~al~avv~rek   75 (394)
T COG0027          11 QATKVMLL-----GSGELGKEVAIEAQRLGVEVIAVDRYANAPAM----------QVAHRSYVIDMLDGDALRAVVEREK   75 (394)
T ss_pred             CCeEEEEe-----cCCccchHHHHHHHhcCCEEEEecCcCCChhh----------hhhhheeeeeccCHHHHHHHHHhhC
Confidence            45689999     89999999999999999999999998743321          1122223345568999999999999


Q ss_pred             ccEEEe
Q 018900          153 FDVVLD  158 (349)
Q Consensus       153 ~d~Vi~  158 (349)
                      +|+||-
T Consensus        76 Pd~IVp   81 (394)
T COG0027          76 PDYIVP   81 (394)
T ss_pred             CCeeee
Confidence            999994

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.62  E-value=0.21  Score=43.40  Aligned_cols=88  Identities=22%  Similarity=0.289  Sum_probs=58.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcChhhHHhhhcC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~l~~~~~~  150 (349)
                      -.+++|||+     |.|.+|..-++.|++.|.+|++++.....          .+.++.. .+++++.++..  ...+.+
T Consensus         7 l~gk~vlVv-----GgG~va~rk~~~Ll~~ga~VtVvsp~~~~----------~l~~l~~~~~i~~~~~~~~--~~dl~~   69 (205)
T TIGR01470         7 LEGRAVLVV-----GGGDVALRKARLLLKAGAQLRVIAEELES----------ELTLLAEQGGITWLARCFD--ADILEG   69 (205)
T ss_pred             cCCCeEEEE-----CcCHHHHHHHHHHHHCCCEEEEEcCCCCH----------HHHHHHHcCCEEEEeCCCC--HHHhCC
Confidence            357899999     78999999999999999999999865421          1112211 24666666643  223444


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      .  +.||-+.+ +-.....+...|++.|+
T Consensus        70 ~--~lVi~at~-d~~ln~~i~~~a~~~~i   95 (205)
T TIGR01470        70 A--FLVIAATD-DEELNRRVAHAARARGV   95 (205)
T ss_pred             c--EEEEECCC-CHHHHHHHHHHHHHcCC
Confidence            3  77765544 33456788888988775

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=94.61  E-value=0.2  Score=48.94  Aligned_cols=100  Identities=13%  Similarity=0.133  Sum_probs=60.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCC-CeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAG-GKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~-~~~~~~D~~~l~~~~~  149 (349)
                      |.+||||.     |+|.+|..+++.+.+.|+++++++.+.+.......    ..++..  .++ ..-...|.+.+.++.+
T Consensus         1 ~~~~ilil-----g~g~~~~~~~~~a~~lG~~~v~~~~~~~~~a~~~~----~ad~~~~~~~~~~~~~~~d~~~l~~~~~   71 (450)
T PRK06111          1 MFQKVLIA-----NRGEIAVRIIRTCQKLGIRTVAIYSEADRDALHVK----MADEAYLIGGPRVQESYLNLEKIIEIAK   71 (450)
T ss_pred             CcceEEEE-----CCcHHHHHHHHHHHHcCCeEEEEechhhccCcchh----hCCEEEEcCCCCccccccCHHHHHHHHH
Confidence            56899999     78999999999999999999999855432110000    001100  000 0112235677777878


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ..++|.|+-..+..-+. ..+.+.+...|+ +++
T Consensus        72 ~~~id~I~p~~~~~~e~-~~~~~~~~~~g~-~~~  103 (450)
T PRK06111         72 KTGAEAIHPGYGLLSEN-ASFAERCKEEGI-VFI  103 (450)
T ss_pred             HhCCCEEEeCCCccccC-HHHHHHHHHCCC-eEE
Confidence            87889998653321111 235666777775 444

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.60  E-value=0.12  Score=46.77  Aligned_cols=98  Identities=18%  Similarity=0.240  Sum_probs=61.9

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCC----CeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcChhhHHhhhcC
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g----~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D~~~l~~~~~~  150 (349)
                      |.|+    |++|.+|..++..|+..|    .+|+.++++++........    +.+...  ...++..+  +++.+.+.+
T Consensus         1 I~II----GagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d----l~~~~~~~~~~~i~~~--~d~~~~~~~   70 (263)
T cd00650           1 IAVI----GAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD----LQDAVEPLADIKVSIT--DDPYEAFKD   70 (263)
T ss_pred             CEEE----CCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH----HHHhhhhccCcEEEEC--CchHHHhCC
Confidence            5789    998999999999999988    7999999887554432111    111111  12233322  334566667


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                      .  |.||-+++.              |+...+.+.+.+++..- ..+|..|
T Consensus        71 a--DiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          71 A--DVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             C--CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            6  999998773              44556777777776653 3444444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02494 adenosylhomocysteinase

Probab=94.59  E-value=0.11  Score=50.46  Aligned_cols=90  Identities=16%  Similarity=0.157  Sum_probs=58.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+     |.|.||+.+++.+...|.+|+++.+++.....           ....++.++     .+++++... 
T Consensus       253 aGKtVvVi-----GyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~e-----------A~~~G~~vv-----~leEal~~A-  310 (477)
T PLN02494        253 AGKVAVIC-----GYGDVGKGCAAAMKAAGARVIVTEIDPICALQ-----------ALMEGYQVL-----TLEDVVSEA-  310 (477)
T ss_pred             CCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCchhhHH-----------HHhcCCeec-----cHHHHHhhC-
Confidence            47899999     78999999999999999999999887643211           111233322     244555554 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       |+||.+.+..-......++.++..+  .++.++.
T Consensus       311 -DVVI~tTGt~~vI~~e~L~~MK~GA--iLiNvGr  342 (477)
T PLN02494        311 -DIFVTTTGNKDIIMVDHMRKMKNNA--IVCNIGH  342 (477)
T ss_pred             -CEEEECCCCccchHHHHHhcCCCCC--EEEEcCC
Confidence             9999877743222344555555433  5776664

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.59  E-value=0.051  Score=46.85  Aligned_cols=91  Identities=20%  Similarity=0.198  Sum_probs=53.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-CCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ||++.|.     |+|.+|..+++.|.+.||+|.+-.|+.++..+ ....        ..+.   +  -..+..++.+.. 
T Consensus         1 m~~~~i~-----GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~--------l~~~---i--~~~~~~dA~~~a-   61 (211)
T COG2085           1 MMIIAII-----GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA--------LGPL---I--TGGSNEDAAALA-   61 (211)
T ss_pred             CcEEEEe-----ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHh--------hccc---c--ccCChHHHHhcC-
Confidence            4566665     89999999999999999999999766543221 1110        0011   1  122344455544 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHh-CCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~-~gv~~~i~~Ss  187 (349)
                       |+|+-...  +.....++...+. .+ .++|.-.+
T Consensus        62 -DVVvLAVP--~~a~~~v~~~l~~~~~-~KIvID~t   93 (211)
T COG2085          62 -DVVVLAVP--FEAIPDVLAELRDALG-GKIVIDAT   93 (211)
T ss_pred             -CEEEEecc--HHHHHhHHHHHHHHhC-CeEEEecC
Confidence             88876544  5555556665554 34 35554443

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.58  E-value=0.06  Score=42.94  Aligned_cols=36  Identities=33%  Similarity=0.428  Sum_probs=28.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEE-cCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~-R~~  112 (349)
                      ...+||-|+     |.|.+|.+|++.|.+.||+|..+. |+.
T Consensus         8 ~~~l~I~iI-----GaGrVG~~La~aL~~ag~~v~~v~srs~   44 (127)
T PF10727_consen    8 AARLKIGII-----GAGRVGTALARALARAGHEVVGVYSRSP   44 (127)
T ss_dssp             ----EEEEE-----CTSCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred             CCccEEEEE-----CCCHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence            346799999     459999999999999999998885 554

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.57  E-value=0.19  Score=46.00  Aligned_cols=94  Identities=20%  Similarity=0.225  Sum_probs=62.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---C-hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D-~~~l~~~~  148 (349)
                      .+.+|||.    |++|-+|..+++.+...|.+|++++++++..+.+           ...+++.+..   + .+.+.+. 
T Consensus       142 ~g~~vlV~----ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~i~~~-  205 (320)
T cd08243         142 PGDTLLIR----GGTSSVGLAALKLAKALGATVTATTRSPERAALL-----------KELGADEVVIDDGAIAEQLRAA-  205 (320)
T ss_pred             CCCEEEEE----cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhcCCcEEEecCccHHHHHHHh-
Confidence            45799999    9999999999999999999999998876433211           1112222211   1 2233333 


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       +.++|.++++.+.  ......++.++..|  +|+.++.
T Consensus       206 -~~~~d~vl~~~~~--~~~~~~~~~l~~~g--~~v~~g~  239 (320)
T cd08243         206 -PGGFDKVLELVGT--ATLKDSLRHLRPGG--IVCMTGL  239 (320)
T ss_pred             -CCCceEEEECCCh--HHHHHHHHHhccCC--EEEEEcc
Confidence             3458999999884  34556666666655  6887765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.57  E-value=0.29  Score=45.19  Aligned_cols=101  Identities=21%  Similarity=0.306  Sum_probs=60.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +||.|+    |+ |++|+.++..|+.++  .+++.++..++.+.......... ......+.+ +.+| .+ .+.+++. 
T Consensus         1 ~KVavi----Ga-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~-~~~~~~~~~-i~~~-~~-y~~~~~a-   70 (313)
T COG0039           1 MKVAVI----GA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHA-AAPLGSDVK-ITGD-GD-YEDLKGA-   70 (313)
T ss_pred             CeEEEE----CC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhc-chhccCceE-EecC-CC-hhhhcCC-
Confidence            589999    98 999999999998875  48999999854443221110000 000111111 2222 22 3344554 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEec
Q 018900          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                       |+|+-+||.              |..-.+.+.....+.+-+-++++-
T Consensus        71 -DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv  117 (313)
T COG0039          71 -DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV  117 (313)
T ss_pred             -CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence             999999983              556677777777777654444443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.56  E-value=0.035  Score=47.05  Aligned_cols=39  Identities=26%  Similarity=0.209  Sum_probs=33.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~  114 (349)
                      ...+++|.|+     |.|.||+.+++.|..-|.+|++.+|....
T Consensus        33 ~l~g~tvgIi-----G~G~IG~~vA~~l~~fG~~V~~~d~~~~~   71 (178)
T PF02826_consen   33 ELRGKTVGII-----GYGRIGRAVARRLKAFGMRVIGYDRSPKP   71 (178)
T ss_dssp             -STTSEEEEE-----STSHHHHHHHHHHHHTT-EEEEEESSCHH
T ss_pred             ccCCCEEEEE-----EEcCCcCeEeeeeecCCceeEEecccCCh
Confidence            4468899999     78999999999999999999999998743

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=94.55  E-value=0.14  Score=48.32  Aligned_cols=96  Identities=16%  Similarity=0.156  Sum_probs=60.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-c-Ch----hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-DP----AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-D~----~~l~~  146 (349)
                      .+.+|||.    |++|-+|..+++.+...|.+|++++++.++.+.+..          ..+++.+. . +.    +.+.+
T Consensus       158 ~g~~VlV~----GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~----------~lGa~~vi~~~~~~~~~~~i~~  223 (348)
T PLN03154        158 KGDSVFVS----AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----------KLGFDEAFNYKEEPDLDAALKR  223 (348)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----------hcCCCEEEECCCcccHHHHHHH
Confidence            46789999    999999999999888899999988876644321110          11232222 1 11    22222


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .. ...+|+|+++.|.  ......++.++..|  +++.++.
T Consensus       224 ~~-~~gvD~v~d~vG~--~~~~~~~~~l~~~G--~iv~~G~  259 (348)
T PLN03154        224 YF-PEGIDIYFDNVGG--DMLDAALLNMKIHG--RIAVCGM  259 (348)
T ss_pred             HC-CCCcEEEEECCCH--HHHHHHHHHhccCC--EEEEECc
Confidence            22 2257999999884  34556666666655  6886653

>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional

Probab=94.55  E-value=0.16  Score=49.91  Aligned_cols=105  Identities=12%  Similarity=0.122  Sum_probs=58.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .+++||||.     +.|.++..+++.+.+.|++++++....+....-. ...+.+-.+......-...|.+.+.++.+..
T Consensus         3 ~~~~~vLi~-----~~geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~-~~aD~~~~i~p~~~~~~y~d~~~i~~~a~~~   76 (467)
T PRK12833          3 SRIRKVLVA-----NRGEIAVRIIRAARELGMRTVAACSDADRDSLAA-RMADEAVHIGPSHAAKSYLNPAAILAAARQC   76 (467)
T ss_pred             CCCcEEEEE-----CCcHHHHHHHHHHHHcCCeEEEEECCCCCCChhH-HhCCEEEecCCCCccccccCHHHHHHHHHHh
Confidence            357899999     7899999999999999999998865432211000 0000000000000001123566777777777


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      ++|+|+-..+.-.+. ..+.+.+.+.|+ .|+.
T Consensus        77 ~~daI~pg~g~lsE~-~~~~~~~e~~gi-~~ig  107 (467)
T PRK12833         77 GADAIHPGYGFLSEN-AAFAEAVEAAGL-IFVG  107 (467)
T ss_pred             CCCEEEECCCccccC-HHHHHHHHHcCC-CccC
Confidence            789888654321111 134555666664 3443

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.55  E-value=0.14  Score=50.17  Aligned_cols=89  Identities=31%  Similarity=0.364  Sum_probs=60.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      +++|+|+     |.|..|..+++.|.+.|++|++.+++......      .....+...++.++.++..  .+.+.+  +
T Consensus        14 ~~~i~v~-----G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~------~~~~~l~~~gi~~~~~~~~--~~~~~~--~   78 (458)
T PRK01710         14 NKKVAVV-----GIGVSNIPLIKFLVKLGAKVTAFDKKSEEELG------EVSNELKELGVKLVLGENY--LDKLDG--F   78 (458)
T ss_pred             CCeEEEE-----cccHHHHHHHHHHHHCCCEEEEECCCCCccch------HHHHHHHhCCCEEEeCCCC--hHHhcc--C
Confidence            5789999     78999999999999999999999986532110      0012234457777766531  122333  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      |.||...|....  ...+.+|++.|+
T Consensus        79 dlVV~Spgi~~~--~p~~~~a~~~~i  102 (458)
T PRK01710         79 DVIFKTPSMRID--SPELVKAKEEGA  102 (458)
T ss_pred             CEEEECCCCCCC--chHHHHHHHcCC
Confidence            999998886543  456777777775

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.54  E-value=0.26  Score=45.39  Aligned_cols=97  Identities=18%  Similarity=0.212  Sum_probs=63.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D----~~~l~~~  147 (349)
                      .+.+|||.    |++|.+|..+++.+...|.+|++++++.++.+.++           ..+++.+ ..+    ...+...
T Consensus       138 ~~~~vlI~----g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  202 (323)
T cd05282         138 PGDWVIQN----AANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-----------ALGADEVIDSSPEDLAQRVKEA  202 (323)
T ss_pred             CCCEEEEc----ccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-----------hcCCCEEecccchhHHHHHHHH
Confidence            45789999    99999999999999999999999988765433221           1122211 111    2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+..+|.|+++.+..  .....++.++..|  +|+.++..
T Consensus       203 ~~~~~~d~vl~~~g~~--~~~~~~~~l~~~g--~~v~~g~~  239 (323)
T cd05282         203 TGGAGARLALDAVGGE--SATRLARSLRPGG--TLVNYGLL  239 (323)
T ss_pred             hcCCCceEEEECCCCH--HHHHHHHhhCCCC--EEEEEccC
Confidence            4445689999998853  2345566665544  78877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PTZ00117 malate dehydrogenase; Provisional

Probab=94.54  E-value=0.23  Score=46.33  Aligned_cols=104  Identities=18%  Similarity=0.222  Sum_probs=62.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      +.+||.|+    |+ |.+|..++..|...| .+|+.++++++......... .-.........++..  ..+++ .+.+.
T Consensus         4 ~~~KI~II----Ga-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl-~~~~~~~~~~~~i~~--~~d~~-~l~~A   74 (319)
T PTZ00117          4 KRKKISMI----GA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDL-KHFSTLVGSNINILG--TNNYE-DIKDS   74 (319)
T ss_pred             CCcEEEEE----CC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHH-hhhccccCCCeEEEe--CCCHH-HhCCC
Confidence            46799999    86 999999999998888 68999998775433211000 000011111122221  12344 55665


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcE-EEEecc
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~-~i~~Ss  187 (349)
                        |+||.+++.              |....+.+.+.+.+..-+- +|.+|-
T Consensus        75 --DiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         75 --DVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             --CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence              999999963              2344667777777665443 666553

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.54  E-value=0.077  Score=50.85  Aligned_cols=74  Identities=15%  Similarity=0.109  Sum_probs=50.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..|+|||+    | +|.+|+.+++++.+.|++|++++..++.....          +.+..+.....|.+.+.++.+..+
T Consensus        11 ~~~~ilIi----G-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~----------~ad~~~~~~~~d~~~l~~~~~~~~   75 (395)
T PRK09288         11 SATRVMLL----G-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQ----------VAHRSHVIDMLDGDALRAVIEREK   75 (395)
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHH----------hhhheEECCCCCHHHHHHHHHHhC
Confidence            45789999    5 57899999999999999999999876432110          000011111246777777777667


Q ss_pred             ccEEEeCCC
Q 018900          153 FDVVLDNNG  161 (349)
Q Consensus       153 ~d~Vi~~a~  161 (349)
                      +|.|+....
T Consensus        76 id~vi~~~e   84 (395)
T PRK09288         76 PDYIVPEIE   84 (395)
T ss_pred             CCEEEEeeC
Confidence            899986443

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.52  E-value=0.2  Score=46.75  Aligned_cols=103  Identities=18%  Similarity=0.236  Sum_probs=62.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~l~~~~~~  150 (349)
                      +++||.|+    | .|.+|..++..+...|. +|+.++++++...... ..............++.. +|.   + .+.+
T Consensus         5 ~~~KI~II----G-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~-ld~~~~~~~~~~~~~I~~~~d~---~-~l~~   74 (321)
T PTZ00082          5 KRRKISLI----G-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKA-LDISHSNVIAGSNSKVIGTNNY---E-DIAG   74 (321)
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHH-HHHHhhhhccCCCeEEEECCCH---H-HhCC
Confidence            45799999    7 69999999999998895 8999998876432100 000000011111223332 343   2 4556


Q ss_pred             CCccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCc-EEEEecc
Q 018900          151 VTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVK-QFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~~gv~-~~i~~Ss  187 (349)
                      .  |+||.+++.                   |+...+.+++.+.+..-+ .+|..|-
T Consensus        75 a--DiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         75 S--DVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             C--CEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            5  999998863                   334466667767666544 5666663

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=94.49  E-value=0.089  Score=48.91  Aligned_cols=38  Identities=29%  Similarity=0.388  Sum_probs=33.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      ||+|.|+    | .|.+|..++..|.+.|++|++++|+++..+
T Consensus         1 mmkI~ii----G-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~   38 (325)
T PRK00094          1 MMKIAVL----G-AGSWGTALAIVLARNGHDVTLWARDPEQAA   38 (325)
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            4689999    5 699999999999999999999999865443

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.47  E-value=0.26  Score=46.06  Aligned_cols=95  Identities=24%  Similarity=0.308  Sum_probs=60.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEc-ChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-DPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-D~~~l~~~~~~~  151 (349)
                      +.+|+|+    |++|.+|..+++.+...|.+|+++++.. ....           +...+++ ++.. +.+....+....
T Consensus       163 g~~vlI~----g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~~~~-----------~~~~g~~~~~~~~~~~~~~~l~~~~  226 (350)
T cd08248         163 GKRVLIL----GGSGGVGTFAIQLLKAWGAHVTTTCSTD-AIPL-----------VKSLGADDVIDYNNEDFEEELTERG  226 (350)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCcc-hHHH-----------HHHhCCceEEECCChhHHHHHHhcC
Confidence            6799999    9999999999999999999998887642 1110           0011121 1111 122223333333


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .+|.|+++.+..  .....++.++..|  +||.++..
T Consensus       227 ~vd~vi~~~g~~--~~~~~~~~l~~~G--~~v~~g~~  259 (350)
T cd08248         227 KFDVILDTVGGD--TEKWALKLLKKGG--TYVTLVSP  259 (350)
T ss_pred             CCCEEEECCChH--HHHHHHHHhccCC--EEEEecCC
Confidence            489999998854  4555666666655  78887653

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=94.46  E-value=0.21  Score=48.38  Aligned_cols=89  Identities=26%  Similarity=0.387  Sum_probs=58.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+|+|+|.     |-|-.|..+++.|.++|++|++.+.++.... ...      ..+..+++++..+....  ..+..  
T Consensus         6 ~~~kv~V~-----GLG~sG~a~a~~L~~~G~~v~v~D~~~~~~~-~~~------~~~~~~~i~~~~g~~~~--~~~~~--   69 (448)
T COG0771           6 QGKKVLVL-----GLGKSGLAAARFLLKLGAEVTVSDDRPAPEG-LAA------QPLLLEGIEVELGSHDD--EDLAE--   69 (448)
T ss_pred             cCCEEEEE-----ecccccHHHHHHHHHCCCeEEEEcCCCCccc-hhh------hhhhccCceeecCccch--hcccc--
Confidence            37899999     7999999999999999999999997664411 100      11223456665554333  23333  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +|.||-..|+....  .+++.+++.|+
T Consensus        70 ~d~vV~SPGi~~~~--p~v~~A~~~gi   94 (448)
T COG0771          70 FDLVVKSPGIPPTH--PLVEAAKAAGI   94 (448)
T ss_pred             CCEEEECCCCCCCC--HHHHHHHHcCC
Confidence            59999888854433  25555555553

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.40  E-value=0.22  Score=45.32  Aligned_cols=96  Identities=22%  Similarity=0.305  Sum_probs=62.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~l~~~  147 (349)
                      .+.+|||.    |++|-+|..+++.+...|.+|++++++++..+.+.           ..+++. +..+    .+.+...
T Consensus       136 ~g~~vlI~----g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~  200 (320)
T cd05286         136 PGDTVLVH----AAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-----------AAGADHVINYRDEDFVERVREI  200 (320)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----------HCCCCEEEeCCchhHHHHHHHH
Confidence            45789999    99999999999999999999999987664432211           112222 2222    1233344


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+..+|.|+++.+.  ......+++++..|  +|+.++.
T Consensus       201 ~~~~~~d~vl~~~~~--~~~~~~~~~l~~~g--~~v~~g~  236 (320)
T cd05286         201 TGGRGVDVVYDGVGK--DTFEGSLDSLRPRG--TLVSFGN  236 (320)
T ss_pred             cCCCCeeEEEECCCc--HhHHHHHHhhccCc--EEEEEec
Confidence            444458999998874  34455566665544  7887765

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.39  E-value=0.25  Score=45.53  Aligned_cols=95  Identities=23%  Similarity=0.246  Sum_probs=61.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc--Ch-hhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--DP-AEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D~-~~l~~~~~~~  151 (349)
                      .+|||.    |++|-+|..+++.+...|.+|++++++.+..+.+.           ..+++.+..  +. ..+.......
T Consensus       148 ~~vlI~----g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~  212 (325)
T cd05280         148 GPVLVT----GATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-----------SLGASEVLDREDLLDESKKPLLKA  212 (325)
T ss_pred             CEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------hcCCcEEEcchhHHHHHHHHhcCC
Confidence            589999    99999999999999899999999998765432211           112222211  11 1223333333


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .+|.|+++.+.  ......+++++..|  +||.++..
T Consensus       213 ~~d~vi~~~~~--~~~~~~~~~l~~~g--~~v~~g~~  245 (325)
T cd05280         213 RWAGAIDTVGG--DVLANLLKQTKYGG--VVASCGNA  245 (325)
T ss_pred             CccEEEECCch--HHHHHHHHhhcCCC--EEEEEecC
Confidence            47999998874  35566677776555  68877753

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.39  E-value=0.053  Score=49.46  Aligned_cols=40  Identities=28%  Similarity=0.364  Sum_probs=34.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSD  116 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~  116 (349)
                      ..+++|||+    |+ |.+|+.++++|.+.| .+|+++.|+.+..+
T Consensus       121 ~~~k~vlVl----Ga-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~  161 (278)
T PRK00258        121 LKGKRILIL----GA-GGAARAVILPLLDLGVAEITIVNRTVERAE  161 (278)
T ss_pred             CCCCEEEEE----cC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            456799999    75 999999999999999 79999999875543

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.39  E-value=0.095  Score=47.37  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=32.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC---CeEEEEEcCCCCc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENS  115 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~  115 (349)
                      ||++|.|+    | .|.+|..+++.|.+.|   ++|.+.+|+.+..
T Consensus         1 ~mm~I~iI----G-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~   41 (267)
T PRK11880          1 MMKKIGFI----G-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKR   41 (267)
T ss_pred             CCCEEEEE----e-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHH
Confidence            57889999    5 6999999999999998   7899999987544

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.14  Score=46.68  Aligned_cols=57  Identities=25%  Similarity=0.421  Sum_probs=47.2

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ...+++|+|+    |.++.+|+.++..|+.+|..|+++.+..                             .++.+.+++
T Consensus       155 ~l~Gk~vvVI----Grs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~  201 (286)
T PRK14175        155 DLEGKNAVVI----GRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKD  201 (286)
T ss_pred             CCCCCEEEEE----CCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhh
Confidence            3468999999    9999999999999999999999998743                             235566666


Q ss_pred             CCccEEEeCCCC
Q 018900          151 VTFDVVLDNNGK  162 (349)
Q Consensus       151 ~~~d~Vi~~a~~  162 (349)
                      .  |+||...+.
T Consensus       202 A--DIVIsAvg~  211 (286)
T PRK14175        202 A--DVIVSAVGK  211 (286)
T ss_pred             C--CEEEECCCC
Confidence            6  999998885

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=94.34  E-value=0.023  Score=50.08  Aligned_cols=86  Identities=16%  Similarity=0.168  Sum_probs=52.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-----eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-----EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-----~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~  147 (349)
                      +.|-+|||    |++..+|..|+++|++...     .+.+..|+.++++..-.....-+. -....++.+..|...+...
T Consensus         2 ~RKvalIT----GanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p-~~~i~~~yvlvD~sNm~Sv   76 (341)
T KOG1478|consen    2 MRKVALIT----GANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHP-KSTIEVTYVLVDVSNMQSV   76 (341)
T ss_pred             CceEEEEe----cCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCC-CceeEEEEEEEehhhHHHH
Confidence            34668999    9999999999999998753     466667877655432211100000 0022456666674443333


Q ss_pred             hcCC--------CccEEEeCCCCC
Q 018900          148 VGGV--------TFDVVLDNNGKN  163 (349)
Q Consensus       148 ~~~~--------~~d~Vi~~a~~~  163 (349)
                      +...        +.|.|+-+||.-
T Consensus        77 ~~A~~di~~rf~~ld~iylNAg~~  100 (341)
T KOG1478|consen   77 FRASKDIKQRFQRLDYIYLNAGIM  100 (341)
T ss_pred             HHHHHHHHHHhhhccEEEEccccC
Confidence            3211        369999999953

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=94.31  E-value=0.55  Score=42.92  Aligned_cols=116  Identities=16%  Similarity=0.248  Sum_probs=68.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCC-CCCCCcccceecC---CCeEEEcC----hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-KPPFNRFNEIVSA---GGKTVWGD----PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~~~l~~~---~~~~~~~D----~~~l  144 (349)
                      ++.+|||-    |-||.+|+.+.+.|+.-|+++++-+...+..+++. ..-+....++...   ++-++..-    ++.+
T Consensus         5 ~~~~~~~~----g~~~~~~~~~~~~~~~~g~~~v~~V~p~~~~~~v~G~~~y~sv~dlp~~~~~Dlavi~vpa~~v~~~l   80 (286)
T TIGR01019         5 KDTKVIVQ----GITGSQGSFHTEQMLAYGTNIVGGVTPGKGGTTVLGLPVFDSVKEAVEETGANASVIFVPAPFAADAI   80 (286)
T ss_pred             CCCcEEEe----cCCcHHHHHHHHHHHhCCCCEEEEECCCCCcceecCeeccCCHHHHhhccCCCEEEEecCHHHHHHHH
Confidence            35689999    99999999999999998988555443332222221 1112233344432   23233322    3344


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +++...----+||..+|......+.+++.+++.|+ |++=.-+.+++..
T Consensus        81 ~e~~~~Gvk~avIis~Gf~e~~~~~l~~~a~~~gi-rilGPNc~Giin~  128 (286)
T TIGR01019        81 FEAIDAGIELIVCITEGIPVHDMLKVKRYMEESGT-RLIGPNCPGIITP  128 (286)
T ss_pred             HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC-EEECCCCceEEcc
Confidence            44433211345566666544445788888888887 7776777666554

ATP citrate lyases appear to form an outgroup.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.28  E-value=0.15  Score=46.80  Aligned_cols=102  Identities=19%  Similarity=0.297  Sum_probs=59.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEEEc---ChhhHHhhh-
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTVWG---DPAEVGNVV-  148 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~---D~~~l~~~~-  148 (349)
                      +|.|+     |.|.+|..+++.|.+.|++|++.+|+++..+.+........   .+.. .+.+++..   +...++.++ 
T Consensus         1 ~IgvI-----G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~aDivi~~vp~~~~~~~v~~   74 (291)
T TIGR01505         1 KVGFI-----GLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVT-EQADVIFTMVPDSPQVEEVAF   74 (291)
T ss_pred             CEEEE-----EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHH-hcCCEEEEecCCHHHHHHHHc
Confidence            48899     68999999999999999999999998755443221111111   1111 12222211   222333332 


Q ss_pred             ------cCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          149 ------GGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       149 ------~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                            ...+ -..||++........+.+.+.+++.|+ +|+-
T Consensus        75 ~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~-~~~~  116 (291)
T TIGR01505        75 GENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGI-DYLD  116 (291)
T ss_pred             CcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-CEEe
Confidence                  1112 246677777777777778888877665 4543

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.24  E-value=0.25  Score=45.20  Aligned_cols=97  Identities=23%  Similarity=0.187  Sum_probs=61.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D----~~~l~~~  147 (349)
                      .+.+|+|+    |++|-+|..+++.+...|.+|++++++.+....+           ...+++.+ ...    .+.+...
T Consensus       139 ~~~~vlv~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~  203 (325)
T TIGR02824       139 AGETVLIH----GGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-----------EALGADIAINYREEDFVEVVKAE  203 (325)
T ss_pred             CCCEEEEE----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HHcCCcEEEecCchhHHHHHHHH
Confidence            45799999    9999999999999999999999998876433211           11122211 111    1233333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|.++++++..  .....++.++..|  ++|.++..
T Consensus       204 ~~~~~~d~~i~~~~~~--~~~~~~~~l~~~g--~~v~~g~~  240 (325)
T TIGR02824       204 TGGKGVDVILDIVGGS--YLNRNIKALALDG--RIVQIGFQ  240 (325)
T ss_pred             cCCCCeEEEEECCchH--HHHHHHHhhccCc--EEEEEecC
Confidence            4444589999998742  3444555554444  78877753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.22  E-value=0.25  Score=45.05  Aligned_cols=96  Identities=21%  Similarity=0.258  Sum_probs=62.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~l~~~  147 (349)
                      .+.+|+|+    |++|-+|..+++.+...|.+|+++++..+..+.+.           ..+++. +..+    .+.+...
T Consensus       139 ~~~~vli~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~i~~~  203 (323)
T cd08241         139 PGETVLVL----GAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-----------ALGADHVIDYRDPDLRERVKAL  203 (323)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-----------HcCCceeeecCCccHHHHHHHH
Confidence            45789999    99999999999999999999999988764332211           111111 1111    2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+..+|.++++.+.  ......++.++..|  +++.++.
T Consensus       204 ~~~~~~d~v~~~~g~--~~~~~~~~~~~~~g--~~v~~~~  239 (323)
T cd08241         204 TGGRGVDVVYDPVGG--DVFEASLRSLAWGG--RLLVIGF  239 (323)
T ss_pred             cCCCCcEEEEECccH--HHHHHHHHhhccCC--EEEEEcc
Confidence            444458999998874  34445566665554  6887764

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.19  E-value=0.13  Score=50.65  Aligned_cols=89  Identities=25%  Similarity=0.371  Sum_probs=57.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+    | .|.+|..+++.|.++|++|+++++.......      .....+...++++..++...   ..  ..
T Consensus        15 ~~~~v~vi----G-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~------~~~~~l~~~gv~~~~~~~~~---~~--~~   78 (480)
T PRK01438         15 QGLRVVVA----G-LGVSGFAAADALLELGARVTVVDDGDDERHR------ALAAILEALGATVRLGPGPT---LP--ED   78 (480)
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhH------HHHHHHHHcCCEEEECCCcc---cc--CC
Confidence            46789999    5 5889999999999999999999865421110      01123444577777665322   22  23


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +|.||...|....  ..++..+++.|+
T Consensus        79 ~D~Vv~s~Gi~~~--~~~~~~a~~~gi  103 (480)
T PRK01438         79 TDLVVTSPGWRPD--APLLAAAADAGI  103 (480)
T ss_pred             CCEEEECCCcCCC--CHHHHHHHHCCC
Confidence            6999988885432  234555555553

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.16  E-value=0.15  Score=49.71  Aligned_cols=90  Identities=19%  Similarity=0.173  Sum_probs=56.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..+++|+|+     |.|.||+.+++.|...|.+|++..+++.....           ....+++++     .+++++...
T Consensus       252 LaGKtVgVI-----G~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~-----------A~~~G~~~~-----~leell~~A  310 (476)
T PTZ00075        252 IAGKTVVVC-----GYGDVGKGCAQALRGFGARVVVTEIDPICALQ-----------AAMEGYQVV-----TLEDVVETA  310 (476)
T ss_pred             cCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCchhHHH-----------HHhcCceec-----cHHHHHhcC
Confidence            357899999     68899999999999999999999887532211           001233322     355566665


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                        |+|+.+.+..-.-....++.++...  .++.++
T Consensus       311 --DIVI~atGt~~iI~~e~~~~MKpGA--iLINvG  341 (476)
T PTZ00075        311 --DIFVTATGNKDIITLEHMRRMKNNA--IVGNIG  341 (476)
T ss_pred             --CEEEECCCcccccCHHHHhccCCCc--EEEEcC
Confidence              9999876632111234444444322  466554

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.13  E-value=0.093  Score=49.22  Aligned_cols=92  Identities=13%  Similarity=0.100  Sum_probs=57.7

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .-.+++|.|+     |.|.||+.+++.|...|.+|.+.+|..+....            ...++.     ..++++++..
T Consensus       147 ~L~gktvgIi-----G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~------------~~~~~~-----~~~l~ell~~  204 (333)
T PRK13243        147 DVYGKTIGII-----GFGRIGQAVARRAKGFGMRILYYSRTRKPEAE------------KELGAE-----YRPLEELLRE  204 (333)
T ss_pred             CCCCCEEEEE-----CcCHHHHHHHHHHHHCCCEEEEECCCCChhhH------------HHcCCE-----ecCHHHHHhh
Confidence            3467899999     67999999999999999999999986532110            001111     2356677766


Q ss_pred             CCccEEEeCCCCChhhHHHH-----HHHHHhCCCcEEEEecccc
Q 018900          151 VTFDVVLDNNGKNLDAVRPV-----ADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~l-----l~~a~~~gv~~~i~~Ss~~  189 (349)
                      .  |+|+.+...+- .++.+     ++.++. | ..||.+|...
T Consensus       205 a--DiV~l~lP~t~-~T~~~i~~~~~~~mk~-g-a~lIN~aRg~  243 (333)
T PRK13243        205 S--DFVSLHVPLTK-ETYHMINEERLKLMKP-T-AILVNTARGK  243 (333)
T ss_pred             C--CEEEEeCCCCh-HHhhccCHHHHhcCCC-C-eEEEECcCch
Confidence            6  88887665332 23333     333332 2 3567676544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-21
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-19
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-19
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-17
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	8e-17
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-16
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-16
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-15
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	9e-15
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-13
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-12
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	9e-12
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-11
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	7e-11
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	7e-11
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	8e-11
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-10
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	9e-10
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-09
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	6e-09
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-09
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-08
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	3e-08
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-08
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	3e-08
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-08
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	7e-08
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	2e-07
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	4e-07
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-07
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-07
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	9e-07
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-06
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-06
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	3e-06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	7e-06
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	7e-05
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-04
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	3e-04
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	3e-04

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 90.7 bits (225), Expect = 5e-21
 Identities = 45/285 (15%), Positives = 88/285 (30%), Gaps = 25/285 (8%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
             + ++L++    G    IG ++AK  L  GH   ++      S   +K          +
Sbjct: 2   GSRSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQL--LESFKA 55

Query: 132 AGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFISS 187
           +G   V G     A +   V  V  DVV+       +++   +    K  G  +  F S 
Sbjct: 56  SGANIVHGSIDDHASLVEAVKNV--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE 113

Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNKDCE 243
            G     D    VE      +    +V + I      +          Y + S       
Sbjct: 114 FGN--DVDNVHAVEPAKSVFEV-KAKVRRAIEAEGIPYTYVSSNCFAGYFLRSL------ 164

Query: 244 EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
                    +  V I G G          D+ +    AV++P   +  ++  +    ++L
Sbjct: 165 AQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSL 224

Query: 304 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
           + +  L  +     +E  +   +             N+     +S
Sbjct: 225 NELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHS 269

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 85.9 bits (213), Expect = 2e-19
 Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 50/263 (19%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
             K+LI      G   +G  LA+ L   GHEVT +                R  + + AG
Sbjct: 3   LSKILIA-----GCGDLGLELARRLTAQGHEVTGLR---------------RSAQPMPAG 42

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVL-----------DNNGKNLDAVRPVADWAKSSGV 179
            +T+  D   P  + ++V     ++++                 ++ +R      + + +
Sbjct: 43  VQTLIADVTRPDTLASIVHLRP-EILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL 101

Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWASFRPQYMIG 235
           +   F+SS G+Y    E    E              ++ E  ++    +    R   + G
Sbjct: 102 QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA--YSSTILRFSGIYG 159

Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN-IFN 294
            G           +       P       +TN  H  D ++ +   ++    A    ++ 
Sbjct: 160 PGRL-----RMIRQAQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYI 211

Query: 295 LVSDRAVTLDGMAKLCAQAAGLP 317
           +  ++ + +  + +  A   G+ 
Sbjct: 212 VTDNQPLPVHDLLRWLADRQGIA 234

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 85.8 bits (212), Expect = 4e-19
 Identities = 41/289 (14%), Positives = 91/289 (31%), Gaps = 28/289 (9%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
            +K +VLIV    GG   IG  +    +  GH   ++   +  S+  K      F +   
Sbjct: 2   DKKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--- 54

Query: 132 AGGKTVWGD---PAEVGNVVGGVTFDVVLD-----NNGKNLDAVRPVADWAKSSGVKQFL 183
            G K +         + + +  V  DVV+          ++     + +  K +G  +  
Sbjct: 55  LGAKLIEASLDDHQRLVDALKQV--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF 112

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNN 239
             S  G+    D   H             +V + I      +          Y  GS   
Sbjct: 113 LPSEFGM--DPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLA- 169

Query: 240 KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR 299
               +     +  +  V I G G          D+ +    ++++P+  +  ++      
Sbjct: 170 ----QLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMN 225

Query: 300 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
            ++   + ++  + +   ++ ++   +    D K       +V    Y 
Sbjct: 226 ILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQ 274

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 80.3 bits (198), Expect = 3e-17
 Identities = 35/282 (12%), Positives = 84/282 (29%), Gaps = 22/282 (7%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           + K+LI+    G    IG ++    + +G+    +      +    +      +   S G
Sbjct: 2   ENKILIL----GPTGAIGRHIVWASIKAGNPTYALVR-KTITAANPETKEELIDNYQSLG 56

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
              + GD      +   +  V   V+       ++    +    K +G  +  F S  G+
Sbjct: 57  VILLEGDINDHETLVKAIKQVDI-VICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGL 115

Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNKDCEEWF 246
                +       V +       + + I      +          Y + +          
Sbjct: 116 D---VDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNL------AQL 166

Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
                 +  V I G G          D+ +    A  +P   +  +   +    +T + +
Sbjct: 167 DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEV 226

Query: 307 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
             L  +  G  +E  +   +    D +++    N +   ++S
Sbjct: 227 IALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHS 268

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 79.3 bits (195), Expect = 8e-17
 Identities = 39/291 (13%), Positives = 87/291 (29%), Gaps = 25/291 (8%)

Query: 66  TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR 125
           TV    + K +VLI     G    IG ++A   L +     I+      S          
Sbjct: 2   TVSPVPSPKGRVLIA----GATGFIGQFVATASLDAHRPTYILARPGPRSP----SKAKI 53

Query: 126 FNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQ 181
           F  +   G   V+G       +  ++     D+V+    G+++     +    K+ G  +
Sbjct: 54  FKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIK 113

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSG 237
               S  G      +P       +       +V + + E+   +          +   + 
Sbjct: 114 RFLPSEFGHDVNRADPV---EPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNN 170

Query: 238 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
                     + +       I G G          D+       V++    + ++    S
Sbjct: 171 ------IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPS 224

Query: 298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
              + ++ +A +  +  G  +  V          A +    +++V  F + 
Sbjct: 225 CNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHD 275

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 46/305 (15%), Positives = 88/305 (28%), Gaps = 79/305 (25%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
             K+ +  T  GG   +G Y+ + +   G+      +    S   K      +       
Sbjct: 2   SLKIAV--T--GGTGFLGQYVVESIKNDGNTP----IILTRSIGNKAINDYEYRV----- 48

Query: 134 GKTVWGDPAEVGNVVGGVTFDVV------------LDNNGKNLDAVRPVADWAKSSGVKQ 181
                 D      +      D V            +     N    + + D    + +  
Sbjct: 49  -----SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISN 103

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFS---------NWASFR 229
            ++ S+   Y      P  E ++  PD        V K   E+              + R
Sbjct: 104 IVYASTISAYSDETSLPWNEKELPLPDLMYG----VSKLACEHIGNIYSRKKGLCIKNLR 159

Query: 230 ----------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSS 276
                       YMI           FF +      + +  + +    F    + +D + 
Sbjct: 160 FAHLYGFNEKNNYMINR---------FFRQAFHGEQLTLHANSVAKREFL---YAKDAAK 207

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG------I 330
            +  A++  +   S  FN+ S  A+T   +A     A G    ++  +P A        +
Sbjct: 208 SVIYALKQEKV--SGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYM 265

Query: 331 DAKKA 335
           D+ KA
Sbjct: 266 DSSKA 270

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 78.4 bits (193), Expect = 1e-16
 Identities = 38/286 (13%), Positives = 90/286 (31%), Gaps = 25/286 (8%)

Query: 71  AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
            +  +K++I     GG   IG ++ +  L   H   I                    E  
Sbjct: 1   GSHMEKIIIY----GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQL--REEFR 54

Query: 131 SAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFIS 186
           S G   + G+     ++ +V+  V  D+V+       + +   + +  K++G  +    S
Sbjct: 55  SMGVTIIEGEMEEHEKMVSVLKQV--DIVISALPFPMISSQIHIINAIKAAGNIKRFLPS 112

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNKDC 242
             G  +   +P      V+        + + I      +          Y +    +   
Sbjct: 113 DFGCEEDRIKPLPPFESVL---EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLH--- 166

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT 302
                    R   + I G+G     + +  D++        +P   +  +        ++
Sbjct: 167 ---PSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIIS 223

Query: 303 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
            + +  L    +GL  + VH   +     +++    +N+     +S
Sbjct: 224 QNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQNIPVSILHS 269

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 74.0 bits (182), Expect = 1e-15
 Identities = 43/234 (18%), Positives = 76/234 (32%), Gaps = 41/234 (17%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
            + KK++++    G    +G  L  E L  G EVT   V      K++        ++  
Sbjct: 2   EKVKKIVLI----GASGFVGSALLNEALNRGFEVTA-VVRHPEKIKIENEHL----KVKK 52

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQ 181
           A          EV  V  G   D V+          D   + +     + D  K +GV +
Sbjct: 53  A----DVSSLDEVCEVCKGA--DAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNR 106

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMI 234
           FL +  AG    A     ++   V  +        G   +   + E   +W  F P   +
Sbjct: 107 FLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADM 166

Query: 235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
             G             + K  + +   G        V D ++ +   +E+P+  
Sbjct: 167 RPG------VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMIDELEHPKHH 211

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 73.0 bits (179), Expect = 9e-15
 Identities = 46/288 (15%), Positives = 86/288 (29%), Gaps = 33/288 (11%)

Query: 69  ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
                K K+LI     GG   IG ++ K  L  GH   + T    NS K          E
Sbjct: 6   EENGMKSKILIF----GGTGYIGNHMVKGSLKLGHPTYVFTR--PNSSKTTLLD-----E 54

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLF 184
             S G   V G+     ++  ++  V  DVV+       +     + +  K +G  +   
Sbjct: 55  FQSLGAIIVKGELDEHEKLVELMKKV--DVVISALAFPQILDQFKILEAIKVAGNIKRFL 112

Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGNNK 240
            S  G+    D    +       +     + + I E    +          Y I      
Sbjct: 113 PSDFGV--EEDRINALPPFEALIER-KRMIRRAIEEANIPYTYVSANCFASYFINY---- 165

Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
                       K  + + G+G     + + +D+         +P A +  +    S   
Sbjct: 166 -----LLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNI 220

Query: 301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
           +T   +     +  G   + +H   +      K+     N+     + 
Sbjct: 221 ITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHC 268

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 46/226 (20%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           KK+ I     G     G     + + +G+EVT++     +S ++                
Sbjct: 4   KKIAIF----GATGQTGLTTLAQAVQAGYEVTVLV---RDSSRLP--------SEGPRPA 48

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKN---------LDAVRPVADWAKSSGVKQF 182
             V GD    A+V   V G   D V+   G            +  R +    K+ GV + 
Sbjct: 49  HVVVGDVLQAADVDKTVAGQ--DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKV 106

Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           +  +SA +     + P     V      H+++ K + E+   + +  P            
Sbjct: 107 VACTSAFLLWDPTKVPPRLQAVTD---DHIRMHKVLRESGLKYVAVMPP----------- 152

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                D+        +   G   + +    DL   +   +   E  
Sbjct: 153 --HIGDQ-PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD 195

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 51/291 (17%), Positives = 89/291 (30%), Gaps = 68/291 (23%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNEIV 130
           KKV I  T  G    IG ++A+ LL  G +V  +    T   E+        F   + I 
Sbjct: 22  KKVFI--T--GICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGS-IA 76

Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVL-------------DNNGKNLDAVRPVADWAKSS 177
                    D A V  ++G +  D V+             ++   N      V   AK +
Sbjct: 77  ---------DHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKN 127

Query: 178 GVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFS-----NWASFRP- 230
            V +F++  +A  Y     + P        P      + K  +E++      ++ +FR  
Sbjct: 128 NVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFRLA 187

Query: 231 ------QY--MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSSMLT 279
                      +           FF R+   +   +         F     V+DL+    
Sbjct: 188 NVVGPRNVSGPLPI---------FFQRLSEGKKCFV---TKARRDFV---FVKDLARATV 232

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAG 329
            AV+         ++  S   V +  +     +A  LP             
Sbjct: 233 RAVDG---VGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPD 280

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 63.8 bits (155), Expect = 9e-12
 Identities = 43/256 (16%), Positives = 89/256 (34%), Gaps = 35/256 (13%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           S A    +L       GH      L++ L   G  +   +   +           +   I
Sbjct: 1   SNAMTGTLLSF-----GHGYTARVLSRALAPQGWRIIGTSRNPD-----------QMEAI 44

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVL---DNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
            ++G + +     E    + GVT  ++    D+ G  + A       A+++  +   ++S
Sbjct: 45  RASGAEPLLWPGEE--PSLDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLS 102

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-----FRPQYMIGSGNNKD 241
           +  +Y   D     E   + P A   +      + +    +     FR   + G G    
Sbjct: 103 TTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRG-- 160

Query: 242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV 301
                F ++ +     I     Q  +  HV D++ +L  ++  P+  +  ++N+  D  V
Sbjct: 161 ----PFSKLGKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPDPGA--VYNVCDDEPV 213

Query: 302 TLDGMAKLCAQAAGLP 317
               +    A+  GLP
Sbjct: 214 PPQDVIAYAAELQGLP 229

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 61.8 bits (150), Expect = 4e-11
 Identities = 40/267 (14%), Positives = 81/267 (30%), Gaps = 37/267 (13%)

Query: 71  AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------------------MTVGD 112
           +A    VL+     G     G  + K+L     +                     + +GD
Sbjct: 1   SANLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD 56

Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD--AVRPV 170
                   P F   + +V          P       G   F        + +D    +  
Sbjct: 57  ITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
            D AK +GVK  + + S G   P D P +  G+         + E+Y++++ + +   R 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNP-DHPLNKLGNGNILVW-KRKAEQYLADSGTPYTIIRA 174

Query: 231 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 290
             ++               ++  +   +  +  +        D++ +   A+   EA + 
Sbjct: 175 GGLLDKEGG-------VRELLVGKDDELLQTDTKT---VPRADVAEVCIQALLFEEAKNK 224

Query: 291 NIFNLVSDRAVTLDGMAKLCAQAAGLP 317
             F+L S    T        A  + + 
Sbjct: 225 -AFDLGSKPEGTSTPTKDFKALFSQVT 250

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 61.5 bits (150), Expect = 7e-11
 Identities = 35/270 (12%), Positives = 75/270 (27%), Gaps = 48/270 (17%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K  +    + G   +G + A+ +  +GH++ ++        ++         E   A   
Sbjct: 15  KYAV--LGATGL--LGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP----ECRVAE-- 64

Query: 136 TVWGDPAEVGNVVGGVTFDVVL------DNNGK--------NLDAVRPVADWAKSSGVKQ 181
               D A +   + G+  D V+       +  +         L    P       + V +
Sbjct: 65  --MLDHAGLERALRGL--DGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPR 120

Query: 182 FLFISSAGIY------KPADE-PPHVEGDVVKPD------AGHVQVEKYISENFSNWASF 228
            L++ SA          P  E   +      K        A   Q  +            
Sbjct: 121 ILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGL-PVVIG 179

Query: 229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
            P  ++G  +           I                N+    +    L +A+E     
Sbjct: 180 IPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQR---NVIDAAEAGRGLLMALERGRI- 235

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
               + L++   + +  + +  A+  G P 
Sbjct: 236 -GERY-LLTGHNLEMADLTRRIAELLGQPA 263

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 61.5 bits (150), Expect = 7e-11
 Identities = 59/306 (19%), Positives = 102/306 (33%), Gaps = 69/306 (22%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFN 127
           A+ K  LI  T  G    IG  L + LL    +V  +    T    N D+++     +  
Sbjct: 25  AQPKVWLI--T--GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW 80

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVTFDVVL----------------DNNGKNLDAVR 168
                  K + GD     +  N   GV  D VL                 +N  N+D   
Sbjct: 81  SNF----KFIQGDIRNLDDCNNACAGV--DYVLHQAALGSVPRSINDPITSNATNIDGFL 134

Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNW 225
            +   A+ + V+ F + +S+  Y      P VE  + KP    A    V KY++E +++ 
Sbjct: 135 NMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA----VTKYVNELYAD- 189

Query: 226 ASFRPQYMI-----------GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQ---FT 266
             F   Y             G   + +         +   +++   V I G G     F 
Sbjct: 190 -VFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC 248

Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-----LCAQAAGLPVEIV 321
              ++ +      LA      A + ++N+      +L+ +       L         E V
Sbjct: 249 ---YIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV 305

Query: 322 HYDPKA 327
           + D + 
Sbjct: 306 YRDFRE 311

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 60.4 bits (146), Expect = 8e-11
 Identities = 31/228 (13%), Positives = 63/228 (27%), Gaps = 40/228 (17%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ I+    G     G  + +E    GHEVT +     N+ K+ +               
Sbjct: 2   KIGII----GATGRAGSRILEEAKNRGHEVTAIV---RNAGKITQTH---------KDIN 45

Query: 136 TVWGD------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
            +  D             V    + +  D   K++ ++  +      +   + L +  A 
Sbjct: 46  ILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105

Query: 190 IYKPADEPPHVEGDVVKPDA---------GHVQVEKYISENFSNWASFRPQYMIGSGNNK 240
             +  ++   +       +A                   +   +W    P  M   G   
Sbjct: 106 SLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG--- 162

Query: 241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
              E   D  + K  +     G  F     + D +  +   +E P   
Sbjct: 163 ---ERTGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHL 204

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 60.6 bits (148), Expect = 1e-10
 Identities = 59/299 (19%), Positives = 104/299 (34%), Gaps = 80/299 (26%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
           IG +L  +L+  G+EV +  V + +S +          E V+   +    D  +  +   
Sbjct: 12  IGSHLVDKLVELGYEVVV--VDNLSSGRR---------EFVNPSAELHVRDLKDY-SWGA 59

Query: 150 GVTFDVVL-------------------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
           G+  DVV                    + N   + A   V +WA+ +GV+  +F SS+ +
Sbjct: 60  GIKGDVVFHFAANPEVRLSTTEPIVHFNEN---VVATFNVLEWARQTGVRTVVFASSSTV 116

Query: 191 YKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS-----NWASFR--------PQYM 233
           Y  AD  P  E +  KP     A     E   +  ++        + R         ++ 
Sbjct: 117 YGDADVIPTPEEEPYKPISVYGAAKAAGEVMCA-TYARLFGVRCLAVRYANVVGPRLRHG 175

Query: 234 IGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEA-- 287
           +           F  ++ R    + + G G Q   +    +VRD       A +  E   
Sbjct: 176 VIYD--------FIMKLRRNPNVLEVLGDGTQRKSYL---YVRDAVEATLAAWKKFEEMD 224

Query: 288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-----------DPKAAGIDAKKA 335
           A     N+ +  AV +  +A++ A+  GL  EI              D K   +   K 
Sbjct: 225 APFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKL 283

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 57.0 bits (137), Expect = 9e-10
 Identities = 27/209 (12%), Positives = 54/209 (25%), Gaps = 28/209 (13%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNE 128
           S A    + I+    G    I   L   LL  +   +T+             P       
Sbjct: 1   SNAMYXYITIL----GAAGQIAQXLTATLLTYTDMHITLYGR---QLKTRIPP-----EI 48

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
           I       + G    P  +   V     +VV     ++   +  +        +++ + +
Sbjct: 49  IDHERVTVIEGSFQNPGXLEQAVTNA--EVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106

Query: 186 SSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           S AG+                P     G  Q    + E+  N+   R  ++       D 
Sbjct: 107 SMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDY 166

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHV 271
           E       +         + +    +   
Sbjct: 167 E-------LIPEGAQFNDAQVSREAVVKA 188

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 48/235 (20%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VL+V    G +  +  YL  EL   GHE   M   +E   ++++               
Sbjct: 23  RVLVV----GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER----------GASD 68

Query: 136 TVWGD-PAEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQF 182
            V  +   +  +    +  D V+   G             +L         A+  G+K+F
Sbjct: 69  IVVANLEEDFSHAFASI--DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRF 126

Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC 242
           + +SS G      +P     ++          +  +  +  ++   RP    G       
Sbjct: 127 IMVSSVG----TVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRP----G------- 171

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS 297
                +       V +     + T      D++ ++   V+         F +++
Sbjct: 172 --PLSNEE-STGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGK-TFEVLN 222

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 56/307 (18%), Positives = 101/307 (32%), Gaps = 68/307 (22%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFN 127
              K  LI    +G    IG  L ++LL     V  +    T    N D++K        
Sbjct: 23  FSPKTWLI----TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQW 78

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVTFDVV------------LDN----NGKNLDAVR 168
                    + GD         V+ G   D V            + +    N  N+    
Sbjct: 79  SRF----CFIEGDIRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFL 132

Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNW 225
            +   AK++ V+ F + +S+  Y      P VE ++  P    A    V KY++E ++  
Sbjct: 133 NILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYA----VTKYVNEIYAQ- 187

Query: 226 ASFRPQYMI-----------GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQ---FT 266
             +   Y             G   + +         +   +++   V I G G     F 
Sbjct: 188 -VYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC 246

Query: 267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI----VH 322
              ++ ++  M  L+    ++A  NI+N+      TL+ ++        L   I    + 
Sbjct: 247 ---YIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK 303

Query: 323 YDPKAAG 329
           Y    +G
Sbjct: 304 YREFRSG 310

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 54.2 bits (131), Expect = 8e-09
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ IV    G    +G  L K L  + +++          +++ +              K
Sbjct: 2   KIFIV----GSTGRVGKSLLKSLSTTDYQIYAGA---RKVEQVPQYN----------NVK 44

Query: 136 TVWGD----PAEVGNVVGGVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFL 183
            V  D    P E+   + G+  D +++ +G         +L     +   A+ + VK+F+
Sbjct: 45  AVHFDVDWTPEEMAKQLHGM--DAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFI 102

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASFRP 230
            +S+    +P          +          + Y+++  + ++   +P
Sbjct: 103 LLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQP 150

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 55/302 (18%), Positives = 95/302 (31%), Gaps = 62/302 (20%)

Query: 70  SAAEKKKVLIVN-TNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFN 127
           S  +KK V++   T + G +V      + LL  G  +V ++T  +      K        
Sbjct: 1   SMVDKKLVVVFGGTGAQGGSVA-----RTLLEDGTFKVRVVTR-NPRKKAAK-------- 46

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVT--FDVVLDNNGKNLDAV----RPVADWAKSSG 178
           E+   G + V GD      +   + G    F V       + +      + +AD A+  G
Sbjct: 47  ELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG 106

Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSG 237
           +   ++     I K             K      +VE+Y  +      S R   Y     
Sbjct: 107 LHYVVYSGLENIKKLTAGRLAAAHFDGK-----GEVEEYFRDIGVPMTSVRLPCYF---- 157

Query: 238 NNKDCEEWFFDRIVRKR---------PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                 E      + ++          +P     M    ++ V DL  ++   ++ PE  
Sbjct: 158 ------ENLLSHFLPQKAPDGKSYLLSLPTGDVPMDG--MS-VSDLGPVVLSLLKMPEKY 208

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFP----FRNMVFI 344
                 L +    T +  A L  +     V      P+      K  FP      NM F 
Sbjct: 209 VGQNIGLSTC-RHTAEEYAALLTKHTRKVVHDAKMTPEDY---EKLGFPGARDLANM-FR 263

Query: 345 FF 346
           F+
Sbjct: 264 FY 265

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 52.7 bits (126), Expect = 3e-08
 Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 26/222 (11%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ ++    G     G  +  E    GHEV  +     +  K           +V     
Sbjct: 2   KIAVL----GATGRAGSAIVAEARRRGHEVLAVV---RDPQKAADRLGATVATLVKEPLV 54

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA- 194
               D   V  VV  ++          +LD    +    ++S       + SA +  P  
Sbjct: 55  LTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGA 114

Query: 195 ------DEPPHVEGDVVKPDAGHVQVEKYISENFS--NWASFRPQYMIGSGNNKDCEEWF 246
                 D P           A +   E    +  +  NW    P     SG         
Sbjct: 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPAT------ 168

Query: 247 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
              +  K  + +   G          +++  +   +E+P A 
Sbjct: 169 -SYVAGKDTLLVGEDGQSHI---TTGNMALAILDQLEHPTAI 206

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 31/172 (18%), Positives = 63/172 (36%), Gaps = 19/172 (11%)

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFS-- 223
           + +  + +GV + +F S++ +Y  A   P  E     P     A  +  E  I  ++   
Sbjct: 97  LLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIE-SYCHT 155

Query: 224 ---NWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQ---FTNIAHVRDLSS 276
                  +R   +IG  +       F  ++ R    + I G+G Q   +    ++ D   
Sbjct: 156 FDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVD 212

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 328
            +   +   E    NIFN+ S+  + +  +A++  +  GL            
Sbjct: 213 AMLFGLRGDER--VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRG 262

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 46/238 (19%), Positives = 76/238 (31%), Gaps = 46/238 (19%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG----DENSDKMKK-----PPF 123
           + K V I+    G     G  L KE+L  G    +  +G      + +  K        F
Sbjct: 17  QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDF 72

Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN------LDAVRPVADWAKSS 177
            + ++  SA      G        +G           G         D V   A+ AK+ 
Sbjct: 73  EKLDDYASA----FQGHDV-GFCCLG-----TTRGKAGAEGFVRVDRDYVLKSAELAKAG 122

Query: 178 GVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIG 235
           G K F  +SS G  K ++     V+G          +VE  + E  F  ++ FRP  ++ 
Sbjct: 123 GCKHFNLLSSKGADKSSNFLYLQVKG----------EVEAKVEELKFDRYSVFRPGVLLC 172

Query: 236 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                   EW   +        +P S     ++  V  +   +   V  P      + 
Sbjct: 173 DRQESRPGEWLVRKFFG----SLPDSWASGHSV-PVVTVVRAMLNNVVRPRDKQMELL 225

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 56/288 (19%), Positives = 101/288 (35%), Gaps = 63/288 (21%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K ++LI  T  GG   IG +LA+ L+ SG EVT+  + D     M  P       +    
Sbjct: 7   KHRILI--T--GGAGFIGGHLARALVASGEEVTV--LDDLRVPPMIPPE-GTGKFLEKPV 59

Query: 134 GKTVWGDPAEVGNVV-----GGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
            +    D ++V  V        V       LD    N+D+ R +     S GV + +  S
Sbjct: 60  LELEERDLSDVRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGS 118

Query: 187 SAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN--WASF------------ 228
           +  +Y  AD  P  E   + P     A      K   E  +     +             
Sbjct: 119 TCEVYGQADTLPTPEDSPLSPRSPYAAS-----KVGLEMVAGAHQRASVAPEVGIVRFFN 173

Query: 229 ------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSSMLT 279
                 RP  ++               ++ +  +P+ G G Q   FT   ++ D+   L 
Sbjct: 174 VYGPGERPDALVPR---------LCANLLTRNELPVEGDGEQRRDFT---YITDVVDKLV 221

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
                P     ++ N  S ++++++ + ++    +    E+    P+ 
Sbjct: 222 ALANRPL---PSVVNFGSGQSLSVNDVIRILQATSP-AAEVARKQPRP 265

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 52.1 bits (125), Expect = 5e-08
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 37/233 (15%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K VLI+    G    I  ++  +L      + T+         K+         +     
Sbjct: 24  KNVLIL----GAGGQIARHVINQLADKQTIKQTLFAR---QPAKIH--------KPYPTN 68

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAG 189
            + + GD    A +   + G    V  +  G++LD     V    K+  VK+ +F+ S G
Sbjct: 69  SQIIMGDVLNHAALKQAMQGQDI-VYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG 127

Query: 190 IYKPADEPPHVEGDVVKPD--AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF 247
           IY           + V  +      +    I  +   +   RP ++         +E   
Sbjct: 128 IYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLT--------DEDII 179

Query: 248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA 300
           D  +  R  P  G+ +        + +++++T  ++ PE        +     
Sbjct: 180 DYELTSRNEPFKGTIV------SRKSVAALITDIIDKPEKHIGENIGINQPGT 226

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 54/290 (18%), Positives = 97/290 (33%), Gaps = 55/290 (18%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIV 130
           E  K+ I    +G    I  ++A+ L   GH V           ++ M    F+  +  V
Sbjct: 28  ENLKISI----TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRV 83

Query: 131 SAGGKTVWGDPAEVGNV---VGGVTF------DVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
                 V      V N+   +GG+ F       ++ +N   + +    + + A+ +G+K+
Sbjct: 84  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN----MIEAARINGIKR 139

Query: 182 FLFISSAGIY-----KPADEPPHVEGDV--VKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           F + SSA IY              E D    +P      +EK  +E       +   + I
Sbjct: 140 FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF-GLEKLATEEL--CKHYNKDFGI 196

Query: 235 GS------------GNNKDCEEWFFDRIVRK-----RPVPIPGSGMQ---FTNIAHVRDL 274
                         G  K   E       RK         + G G+Q   FT    + + 
Sbjct: 197 ECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT---FIDEC 253

Query: 275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
              +    ++         N+ SD  V+++ MA++        + I H  
Sbjct: 254 VEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP 300

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 48/303 (15%), Positives = 95/303 (31%), Gaps = 74/303 (24%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELL--GSGHEVTI---MTVGDENSDKMKKPPFNRFN 127
           E + +LI  T  GG   +G  LA          +V +          S+         F 
Sbjct: 9   ENQTILI--T--GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSS-LGHFK 63

Query: 128 EIVSAGGKTVWGD--PAEVGNVVGGVTFDVVL---------DNNGK-----NLDAVRPVA 171
            ++   G+ +  D         +  + FD +            N +     N  A   + 
Sbjct: 64  NLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLL 123

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENF------ 222
           + A+S   K  ++ SSAG+Y    + P+V G    P+          K   + F      
Sbjct: 124 EIARSKKAK-VIYASSAGVYG-NTKAPNVVGKNESPENVYG----FSKLCMDEFVLSHSN 177

Query: 223 -SNWASFR------P-QY-------MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ--- 264
            +     R      P ++       M+                +  + V +   G Q   
Sbjct: 178 DNVQVGLRYFNVYGPREFYKEKTASMVLQ---------LALGAMAFKEVKLFEFGEQLRD 228

Query: 265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 324
           F    ++ D+      A++  +   S ++N+   +A + + +  +  +  G        +
Sbjct: 229 FV---YIEDVIQANVKAMKAQK---SGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKN 282

Query: 325 PKA 327
           P A
Sbjct: 283 PYA 285

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 35/202 (17%)

Query: 138 WGDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           +  P  +     GV    +L       +N   +     V   A+ +GVK   +   A   
Sbjct: 54  YNQPESLQKAFAGV--SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF-- 109

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCE---EWFF 247
             A+E       V      H+  E  I      +   R   Y          +       
Sbjct: 110 --AEESIIPLAHV------HLATEYAIRTTNIPYTFLRNALYT---------DFFVNEGL 152

Query: 248 DRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM 306
                   +    GSG+   N     +L+      +      +   +NLVS++  T D +
Sbjct: 153 RASTESGAIVTNAGSGI--VNSVTRNELALAAATVLTEEGHEN-KTYNLVSNQPWTFDEL 209

Query: 307 AKLCAQAAGLPVEIVHYDPKAA 328
           A++ ++ +G  V       +  
Sbjct: 210 AQILSEVSGKKVVHQPVSFEEE 231

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 30/199 (15%)

Query: 138 WGDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           + +   +     G+  D V+        + K +  V  +   AK SGV   +FI      
Sbjct: 53  YFNQESMVEAFKGM--DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD- 109

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDRI 250
              + P H+               + +S +  ++   R   YM       D  + +   +
Sbjct: 110 -QHNNPFHMSPY-------FGYASRLLSTSGIDYTYVRMAMYM-------DPLKPYLPEL 154

Query: 251 VRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
           +    +  P G G    N     D++  +   ++NP+      + L    +  +  +A +
Sbjct: 155 MNMHKLIYPAGDGR--INYITRNDIARGVIAIIKNPDTWGK-RYLLSGY-SYDMKELAAI 210

Query: 310 CAQAAGLPVEIVHYDPKAA 328
            ++A+G  ++      +  
Sbjct: 211 LSEASGTEIKYEPVSLETF 229

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 26/198 (13%), Positives = 60/198 (30%), Gaps = 28/198 (14%)

Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD--------AGHVQ 213
           N++    + + AK   V++ +  S+ G++ P   +       + +P         A  + 
Sbjct: 88  NMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELL 147

Query: 214 VEKYISENFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNI 268
            + Y  +   +  S R   +I                 F   V++       +  +   +
Sbjct: 148 GQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPM 207

Query: 269 AHVRDLSSMLTLAVENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
            ++ D    L    E         N +N V+    T   +     +   +P   + Y   
Sbjct: 208 MYMPDALKALVDLYEADRDKLVLRNGYN-VTAYTFTPSELYSKIKER--IPEFEIEYKED 264

Query: 327 AAG---------IDAKKA 335
                       +D+ +A
Sbjct: 265 FRDKIAATWPESLDSSEA 282

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 28/197 (14%)

Query: 138 WGDPAEVGNVVGGVTFDVVL----DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
           +GD A + + + GV  + +L       G+     R V + AK++GVK   + S       
Sbjct: 53  YGDEAALTSALQGV--EKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL------ 104

Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDRIVR 252
                H +   +     H++ EK ++++   +   R   Y        +         + 
Sbjct: 105 ----LHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYS-------ENYLASAPAALE 153

Query: 253 KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
                   G G      A   D ++     +         ++ L  D A TL  +A    
Sbjct: 154 HGVFIGAAGDGK--IASATRADYAAAAARVISEAGHEGK-VYELAGDSAWTLTQLAAELT 210

Query: 312 QAAGLPVEIVHYDPKAA 328
           + +G  V   +      
Sbjct: 211 KQSGKQVTYQNLSEADF 227

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 48.7 bits (117), Expect = 9e-07
 Identities = 57/313 (18%), Positives = 100/313 (31%), Gaps = 82/313 (26%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGDENSDKMKKPPFNRFNEIVSA 132
           +VL+     GG   IG ++ ++LL  G EV +   +  G                E V  
Sbjct: 2   RVLVT----GGAGFIGSHIVEDLLARGLEVAVLDNLATGKR--------------ENVPK 43

Query: 133 GGKTVWGD---PAEVGNVVGGVTFDVVL-------------------DNNGKNLDAVRPV 170
           G      D      V           V                    + N   L     +
Sbjct: 44  GVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVN---LLGGLNL 100

Query: 171 ADWAKSSGVKQFLFISSAG-IY-KPADEPPHVEGDVVKPD----AGHVQVEKYISENFS- 223
            +  +  GV++ +F S+ G IY +  +     E    +P     A     E Y+   +  
Sbjct: 101 LEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL-SVYGQ 159

Query: 224 ----NWASFRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPI-----PGSGMQ---FTN 267
                W S R   + G   +   E      F +R+++  PV +     PG       +  
Sbjct: 160 SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV- 218

Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY---- 323
             +V D++    LA+     +   I+N+ +    T   +    A+AAG   E+       
Sbjct: 219 --YVGDVAEAHALALF----SLEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRP 272

Query: 324 -DPKAAGIDAKKA 335
            D + + +   K 
Sbjct: 273 GDLERSVLSPLKL 285

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 49.0 bits (116), Expect = 1e-06
 Identities = 46/283 (16%), Positives = 81/283 (28%), Gaps = 49/283 (17%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAG 133
              LIV    G   +IG  LA+ L  +        V G     +      N     V   
Sbjct: 2   SVALIV----GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI-NYVQCD 56

Query: 134 GKTVWGDPAEVGNVVGGVTFDVVL------------DNNGKNLDAVRPVADW--AKSSGV 179
                 DP +    +  +T    +            +N   N    R V D        +
Sbjct: 57  ----ISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNL 112

Query: 180 KQFLFISSAGIYK---------PADEPPHVEGD-VVKPDAGHVQVEKYISENFS-----N 224
           K     +    Y           + +PP+ E    +K    +  +E  + E         
Sbjct: 113 KHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLT 172

Query: 225 WASFRPQYMIG----SGNNKDCEEWFFDRIVRK--RPVPIPGSGMQFTNIAHVRD---LS 275
           W+  RP  + G    S  N       +  I +   + +   G    +   +   D   ++
Sbjct: 173 WSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA 232

Query: 276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
                A  +P A +   FN+ +          K+ A+  G+  
Sbjct: 233 EHHIWAAVDPYAKNE-AFNVSNGDVFKWKHFWKVLAEQFGVEC 274

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 46/276 (16%), Positives = 79/276 (28%), Gaps = 63/276 (22%)

Query: 90  IGFYLAKELLGSG-HEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN 146
           IG  + K L   G  ++ ++   D  ++  K          + +              G 
Sbjct: 11  IGSNIVKALNDKGITDILVV---DNLKDGTKFVNLVDLNIADYMDKEDFL---IQIMAGE 64

Query: 147 VVGGVTF---------------DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
             G V                   ++DNN       + +  +     +  FL+ SSA  Y
Sbjct: 65  EFGDVEAIFHEGACSSTTEWDGKYMMDNN---YQYSKELLHYCLEREIP-FLYASSAATY 120

Query: 192 KPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRP-------QYMIGS 236
                      +  KP              V + + E  S    FR        +   GS
Sbjct: 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS 180

Query: 237 GNN---KDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEAAS 289
             +            ++   + P    GS      F    +V D++ +    +EN     
Sbjct: 181 MASVAFH-----LNTQLNNGESPKLFEGSENFKRDFV---YVGDVADVNLWFLENGV--- 229

Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
           S IFNL + RA +   +A             + Y P
Sbjct: 230 SGIFNLGTGRAESFQAVADATLAYHKKGQ--IEYIP 263

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 48/297 (16%), Positives = 85/297 (28%), Gaps = 75/297 (25%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD--ENSDKMKKPPFNRFNEI 129
           E + +++  T  GG   IG  + K L   G  ++ ++   D  ++  K          + 
Sbjct: 45  EGRMIIV--T--GGAGFIGSNIVKALNDKGITDILVV---DNLKDGTKFVNLVDLNIADY 97

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTF---------------DVVLDNNGKNLDAVRPVADWA 174
           +              G   G V                   ++DNN       + +  + 
Sbjct: 98  MDKEDFL---IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNN---YQYSKELLHYC 151

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWA 226
               +  FL+ SSA  Y           +  KP              V + + E  S   
Sbjct: 152 LEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIV 210

Query: 227 SFRP-------QY-------MIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNI 268
            FR        +        +               ++   + P    GS      F   
Sbjct: 211 GFRYFNVYGPREGHKGSMASVAFH---------LNTQLNNGESPKLFEGSENFKRDFV-- 259

Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
            +V D++ +    +EN     S IFNL + RA +   +A             + Y P
Sbjct: 260 -YVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKGQ--IEYIP 310

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 40/226 (17%), Positives = 73/226 (32%), Gaps = 43/226 (19%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVS 131
            K+VL+     G   + G +L   +L       ++    +   +  +   P     E++ 
Sbjct: 5   PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLP 60

Query: 132 AGGKTVWGDPAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
                + G        +G           F  V      + D    V   A   G + +L
Sbjct: 61  Q----LDGSIDTAFCCLGTTIKEAGSEEAFRAV------DFDLPLAVGKRALEMGARHYL 110

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDC 242
            +S+ G    AD    +  + VK      ++E+ + E  +      RP  + G       
Sbjct: 111 VVSALG----ADAKSSIFYNRVK-----GELEQALQEQGWPQLTIARPSLLFGPREEFRL 161

Query: 243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL-SSMLTLAVENPEA 287
            E     I R     +PG    +  I    DL  ++  LA+E  + 
Sbjct: 162 AEILAAPIAR----ILPGK---YHGI-EACDLARALWRLALEEGKG 199

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 23/213 (10%), Positives = 63/213 (29%), Gaps = 56/213 (26%)

Query: 146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDV 204
           N +   T  +         + ++          +K+ ++ ++     +   +      + 
Sbjct: 126 NTLT--TLKL--------YERLK------HFKRLKKVVYSAAGCSIAEKTFDDAKATEET 169

Query: 205 VKPDAGHVQ----VEKYISE-----------------NFSNWASFRPQYMIGSGNNKDCE 243
                 +      + K   E                  F N   + P  ++G+G  +   
Sbjct: 170 DIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQN--VYGPGEILGAGRWRGTP 227

Query: 244 EW--------FFDRIVRKRPVPIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEAASSNI 292
                     F  + ++  P+P+   G+    F     V D+++ L       +     +
Sbjct: 228 ATVWRNVTPTFIYKALKGMPLPLENGGVATRDFI---FVEDVANGLIACAA--DGTPGGV 282

Query: 293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 325
           +N+ S +  ++  +A    +  G   E+     
Sbjct: 283 YNIASGKETSIADLATKINEITGNNTELDRLPK 315

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 37/297 (12%), Positives = 80/297 (26%), Gaps = 50/297 (16%)

Query: 71  AAEKKKVLIVN-TNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           A +KK + +V  T   G ++I     +     GH V             ++        +
Sbjct: 2   AQQKKTIAVVGATGRQGASLI-----RVAAAVGHHVRAQV-HSLKGLIAEELQAIPNVTL 55

Query: 130 VSAGGKTVWGDPAEVGNVVGGVT--FDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFIS 186
                  +  +   +  +  G    F       G  +   + +AD AK +G ++ +++ S
Sbjct: 56  FQG---PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS 112

Query: 187 --SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCE 243
                +Y P    P               VE Y+ +            Y           
Sbjct: 113 MPDHSLYGPWPAVPMWAP--------KFTVENYVRQLGLPSTFVYAGIYN---------- 154

Query: 244 EWFFDRIVRKRPVPIPGSG-----------MQFTNIAHVRDLSSM-LTLAVENPEAASSN 291
             F         + +   G           +    +    D+    L +  + P+  + +
Sbjct: 155 NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGH 214

Query: 292 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA--AGIDAKKAFPFRNMVFIFF 346
              L  +  ++   +    ++A    V  V          I          +  + F
Sbjct: 215 RIALTFE-TLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAI-EVVF 269

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 36/150 (24%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            ++L+  T  G    +G  +   L    HEV +    D   D                  
Sbjct: 3   NRLLV--T--GAAGGVGSAIRPHLGTLAHEVRLS---D-IVDLGAAEAHEEI-------- 46

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVL------------DNNGKNLDAVRPVADWAKSSGV 179
             V  D      V ++V     D ++            D    N+     + + A++ G 
Sbjct: 47  --VACDLADAQAVHDLVKDC--DGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGK 102

Query: 180 KQFLFISSAGIY-KPADEPPHVEGDVVKPD 208
            + +F SS                   +PD
Sbjct: 103 PRIVFASSNHTIGYYPRTTRIDTEVPRRPD 132

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 29/210 (13%), Positives = 54/210 (25%), Gaps = 69/210 (32%)

Query: 155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-----DVVKPDA 209
           V  D    N D  + V D  KS        +S   I         V G       +    
Sbjct: 24  VFEDAFVDNFD-CKDVQDMPKS-------ILSKEEIDHIIMSKDAVSGTLRLFWTLL-SK 74

Query: 210 GHVQVEKYISE----NFSNW--ASFRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPI 258
               V+K++ E    N+  +  +  + +    S   +   E     +  +++  K  V  
Sbjct: 75  QEEMVQKFVEEVLRINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133

Query: 259 PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA---K--LCAQA 313
                          L   L                L   + V +DG+    K  +    
Sbjct: 134 L---------QPYLKLRQAL--------------LELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 314 AGLPVEIVHYDPKAAGIDAKKAFPFRNMVF 343
                        +  +  +    F+  +F
Sbjct: 171 C-----------LSYKV--QCKMDFK--IF 185

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 35/275 (12%), Positives = 83/275 (30%), Gaps = 31/275 (11%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
            ++I  T  G    +G  L  +L  +     I  V  +  ++  +    + + IV   G 
Sbjct: 2   NIVI--T--GAKGFVGKNLKADLTSTTDHH-IFEVHRQTKEEELESALLKADFIVHLAGV 56

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD 195
                  E                   N+  +  V D    +  K  + +SS+       
Sbjct: 57  NRPEHDKEFSLG---------------NVSYLDHVLDILTRNTKKPAILLSSSIQATQ-- 99

Query: 196 EPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---FFDRIVR 252
           + P+      K     + + +Y  E  +    +R   + G     +       F  +I R
Sbjct: 100 DNPY---GESKLQGEQL-LREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIAR 155

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
              + +         + +V D+ + +  A+E      + +  + +   VTL  +  L  +
Sbjct: 156 NEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYK 214

Query: 313 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFY 347
                ++           +      + + +    +
Sbjct: 215 FKQSRLDR-TLPKLDNLFEKDLYSTYLSYLPSTDF 248

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 47/201 (23%)

Query: 163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE------- 215
           N+     +   A ++ +K F ++S+A +    +     E   ++  +    V+       
Sbjct: 190 NVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGY 249

Query: 216 ---KYISENFSNWAS---------FRPQYMIGS------GNNKDCEEWFFDRIVR----- 252
              K+  E     A+         FR   ++         N  D    +  R+V      
Sbjct: 250 GTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSD----WVTRMVLSLMAT 305

Query: 253 -------KRPVPIPGSGMQFTNIAHVRDLSSM---LTLAVENPEAASSNIFNLVS--DRA 300
                    P           +   V  ++     L   V     A    +++++  D  
Sbjct: 306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDG 365

Query: 301 VTLDGMAKLCAQAAGLPVEIV 321
           + LD         AG P+  +
Sbjct: 366 IGLDEYVDW-LIEAGYPIRRI 385

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.98
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.98
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.98
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.97
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.97
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.96
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.96
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.96
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.95
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.95
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.95
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.92
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.92
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.82
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.81
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.8
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.79
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.78
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.75
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.74
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.74
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.74
1spx_A	278	Short-chain reductase family member (5L265); paral	99.73
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.73
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.73
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.73
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.73
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.73
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.73
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.72
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.72
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.71
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.71
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.71
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.71
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.7
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.7
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.7
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.7
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.69
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.69
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.69
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.69
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.68
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.68
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.68
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.68
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.68
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.68
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.68
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.68
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.67
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.67
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.67
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.67
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.67
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.67
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.66
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.66
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.66
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.66
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.66
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.66
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.66
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.66
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.66
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.66
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.66
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.65
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.65
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.65
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.65
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.65
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.65
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.65
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.64
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.64
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.64
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.64
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.64
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.64
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.64
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.64
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.64
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.64
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.64
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.63
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.63
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.63
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.63
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.63
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.63
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.63
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.63
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.63
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.63
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.63
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.63
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.63
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.62
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.62
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.62
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.62
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.62
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.62
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.62
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.62
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.61
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.61
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.61
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.61
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.61
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.61
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.61
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.6
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.6
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.6
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.6
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.6
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.6
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.6
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.6
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.6
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.59
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.59
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.59
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.59
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.59
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.59
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.59
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.59
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.59
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.58
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.58
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.58
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.57
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.57
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.57
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.57
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.57
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.57
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.57
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.57
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.57
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.57
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.56
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.56
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.56
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.56
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.56
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.56
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.56
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.55
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.55
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.55
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.55
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.55
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.54
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.54
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.54
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.54
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.54
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.54
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.54
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.54
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.53
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.53
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.53
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.53
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.53
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.52
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.52
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.52
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.52
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.52
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.52
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.51
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.51
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.51
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.51
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.51
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.51
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.51
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.51
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.51
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.5
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.5
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.49
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.49
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.49
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.48
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.48
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.47
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.47
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.47
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.47
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.44
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.44
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.44
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.44
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.42
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.41
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.39
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.37
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.37
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.37
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.35
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.35
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.35
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.35
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.33
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.32
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.32
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.31
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.31
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.28
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.28
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.25
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.25
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.14
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.11
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.07
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.03
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.98
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.87
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.8
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.66
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.65
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.59
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.59
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.55
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.52
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.45
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.3
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.28
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.19
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.16
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.15
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.13
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.13
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.1
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.09
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.09
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.06
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.96
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.93
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.93
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.89
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.84
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.84
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.81
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.79
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.72
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.66
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.53
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.49
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.46
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.34
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.32
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.31
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.3
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.27
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.23
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.21
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.2
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.18
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.15
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.09
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.09
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.08
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.06
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.04
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.02
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.01
1lnq_A	336	MTHK channels, potassium channel related protein;	97.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.97
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.97
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.97
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.96
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.94
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.94
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.94
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.93
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.89
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.89
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.87
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.87
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.82
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.82
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.78
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.78
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.77
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.75
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.7
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.69
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.66
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.65
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.64
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.64
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.62
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.61
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.6
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.59
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.59
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.57
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.53
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.52
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.51
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.51
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.49
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.47
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.46
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.44
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.42
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.42
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	96.41
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.41
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.4
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.4
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.38
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.38
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.32
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.31
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.29
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.28
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.28
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.27
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.26
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.26
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.25
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.2
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.2
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.18
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.15
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.12
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.08
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.07
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.05
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.03
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.01
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.01
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.01
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	96.0
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	95.99
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	95.96
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	95.95
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.95
3keo_A	212	Redox-sensing transcriptional repressor REX; DNA b	95.94
4ezb_A	317	Uncharacterized conserved protein; structural geno	95.94
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.88
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.87
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.85
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	95.82
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	95.8
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.79
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.78
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.75
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.75
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.69
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.68
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.68
3nkl_A	141	UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo	95.67
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	95.66
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	95.66
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	95.61
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.59
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.59
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	95.59
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.55
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	95.54
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	95.53
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	95.51
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.51
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	95.49
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	95.47
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.47
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.46
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.44
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.44
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	95.42
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.4
2dzd_A	461	Pyruvate carboxylase; biotin carboxylase, ligase;	95.38
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	95.38
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.37
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.37
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.37
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	95.34
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.34
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.33
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	95.33
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.28
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.24
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	95.23
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.21
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.21
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.2
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	95.15
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.13
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	95.13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	95.12
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	95.12
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.12
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.1
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	95.09
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.09
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.07
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.07
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	95.05
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	95.05
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	95.01
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.01
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.0
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	94.99
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	94.99
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.97
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	94.97
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	94.96
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.95

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.9e-36  Score=279.41  Aligned_cols=248  Identities=17%  Similarity=0.212  Sum_probs=206.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC--hhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~~~l~~~~~~  150 (349)
                      |+|+||||    ||+||||++|+++|+++|++|++++|...... +             .+++++.+|  .+++.+++++
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-------------~~~~~~~~Dl~~~~~~~~~~~   62 (311)
T 3m2p_A            1 MSLKIAVT----GGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-------------NDYEYRVSDYTLEDLINQLND   62 (311)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCCHHHHHHHTTT
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-------------CceEEEEccccHHHHHHhhcC
Confidence            57899999    99999999999999999999999999832211 1             167788888  5677777775


Q ss_pred             CCccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          151 VTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       151 ~~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                        +|+|||+|+.            |+.++.+++++|++.+++||||+||.++|+.....++.|+.+..+.    .+|..+
T Consensus        63 --~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  140 (311)
T 3m2p_A           63 --VDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLAC  140 (311)
T ss_dssp             --CSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHH
T ss_pred             --CCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHH
Confidence              5999999984            5778999999999999999999999999998877888998876654    457777


Q ss_pred             HHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccC
Q 018900          215 EKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  289 (349)
Q Consensus       215 ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  289 (349)
                      |+++++    .+++++++||+++|||+... .++..++..+..+.++.+++++++.++|+|++|+|++++.+++++.  .
T Consensus       141 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~  218 (311)
T 3m2p_A          141 EHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK--V  218 (311)
T ss_dssp             HHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT--C
T ss_pred             HHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC--C
Confidence            877766    58999999999999998765 4778888899999999999999999999999999999999999886  3


Q ss_pred             CCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCC-C-----ccCCCccc---cCCCccce
Q 018900          290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP-K-----AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       290 ~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~-~-----~~~~~~~k---~~g~~p~~  342 (349)
                      +++||+++++.+++.|+++.+++.+|.+.++...+. .     ....+..|   .+||+|++
T Consensus       219 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  280 (311)
T 3m2p_A          219 SGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDY  280 (311)
T ss_dssp             CEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSC
T ss_pred             CCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCccc
Confidence            589999999999999999999999999888777665 1     12233333   39999984

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=3.1e-36  Score=282.43  Aligned_cols=258  Identities=19%  Similarity=0.219  Sum_probs=205.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-------CCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-------AGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~D---~  141 (349)
                      .++|+||||    ||+||||++|+++|+++|++|++++|.......       ....+..       .+++++.+|   .
T Consensus        23 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~   91 (351)
T 3ruf_A           23 FSPKTWLIT----GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY-------NLDEVKTLVSTEQWSRFCFIEGDIRDL   91 (351)
T ss_dssp             HSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH-------HHHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred             CCCCeEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchh-------hhhhhhhccccccCCceEEEEccCCCH
Confidence            357899999    999999999999999999999999997643221       0111111       467888887   6


Q ss_pred             hhHHhhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          142 AEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       142 ~~l~~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      +++.+++++  +|+|||+|+.                |+.++.+++++|++.+++||||+||.++|+.....+++|+.+.
T Consensus        92 ~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  169 (351)
T 3ruf_A           92 TTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIG  169 (351)
T ss_dssp             HHHHHHTTT--CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             HHHHHHhcC--CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCC
Confidence            677888875  5999999983                5778999999999999999999999999999888889998876


Q ss_pred             CCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          206 KPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       206 ~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      .+.    .+|+.+|+++++    .+++++++||+++|||+...     .++..++..+..+.++.+++++++.++|+|++
T Consensus       170 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~  249 (351)
T 3ruf_A          170 NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYID  249 (351)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHH
Confidence            654    457777777654    49999999999999998754     36778888999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC-----ceeEEcCCC-----ccCCCccc---cCCCc
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-----VEIVHYDPK-----AAGIDAKK---AFPFR  339 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~-----~~~~~~~~~-----~~~~~~~k---~~g~~  339 (349)
                      |+|++++.+++++....+++||+++++.+|+.|+++.+++.+|.+     ......+..     ....+..|   .+||+
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  329 (351)
T 3ruf_A          250 NVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYR  329 (351)
T ss_dssp             HHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred             HHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCC
Confidence            999999999998544445899999999999999999999999983     222222211     12233333   39999


Q ss_pred             cce
Q 018900          340 NMV  342 (349)
Q Consensus       340 p~~  342 (349)
                      |++
T Consensus       330 p~~  332 (351)
T 3ruf_A          330 PNI  332 (351)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            985

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3.5e-35  Score=274.74  Aligned_cols=259  Identities=14%  Similarity=0.174  Sum_probs=204.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~  145 (349)
                      .++|+||||    ||+||||++|+++|+++|  ++|++++|.......      .....+ ...+++++.+|   .+.+.
T Consensus        22 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~------~~l~~~~~~~~~~~~~~Dl~d~~~~~   91 (346)
T 4egb_A           22 SNAMNILVT----GGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL------NNVKSIQDHPNYYFVKGEIQNGELLE   91 (346)
T ss_dssp             --CEEEEEE----TTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG------GGGTTTTTCTTEEEEECCTTCHHHHH
T ss_pred             cCCCeEEEE----CCccHHHHHHHHHHHhhCCCcEEEEEeccccccch------hhhhhhccCCCeEEEEcCCCCHHHHH
Confidence            356899999    999999999999999999  678888776422110      011111 12467788887   67788


Q ss_pred             hhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCC-CCCCCCCCCCCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPD  208 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~-~~~~~~e~~~~~~~  208 (349)
                      +++++.++|+|||+|+.                |+.++.+++++|++.+++||||+||.++|+.. ...++.|+.+..+.
T Consensus        92 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~  171 (346)
T 4egb_A           92 HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN  171 (346)
T ss_dssp             HHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC
T ss_pred             HHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC
Confidence            88887567999999983                46789999999999999999999999999986 45688888876654


Q ss_pred             ----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          209 ----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       209 ----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                          .+|..+|+++.+    .+++++++||+++|||+... .++..++..+..+.++.+++++++.++|+|++|+|++++
T Consensus       172 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  251 (346)
T 4egb_A          172 SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAID  251 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHH
Confidence                357777777765    49999999999999998754 367778888999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-eEEcCCC-----ccCCCccc---cCCCccce
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPK-----AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-~~~~~~~-----~~~~~~~k---~~g~~p~~  342 (349)
                      .+++++..  |++||+++++.+++.|+++.+.+.+|.+.. +...+..     ....+..|   .+||+|++
T Consensus       252 ~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  321 (346)
T 4egb_A          252 VVLHKGRV--GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKY  321 (346)
T ss_dssp             HHHHHCCT--TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCC
T ss_pred             HHHhcCCC--CCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCC
Confidence            99998763  589999999999999999999999998755 3333222     22234443   49999985

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3.5e-35  Score=270.75  Aligned_cols=249  Identities=23%  Similarity=0.279  Sum_probs=197.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhh--HHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE--VGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~--l~~~~~~~~  152 (349)
                      |+||||    ||+||||++|+++|+++|++|++++|..+....           ....+++++.+|..+  +.+++++  
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~Dl~d~~~~~~~~~--   63 (312)
T 3ko8_A            1 MRIVVT----GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-----------FVNPSAELHVRDLKDYSWGAGIKG--   63 (312)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGG-----------GSCTTSEEECCCTTSTTTTTTCCC--
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCEEEEEeCCCCCchh-----------hcCCCceEEECccccHHHHhhcCC--
Confidence            589999    999999999999999999999999998754432           113467788888433  5555544  


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChH
Q 018900          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       153 ~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~  212 (349)
                       |+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....++.|+.+..+.    .+|.
T Consensus        64 -d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~  142 (312)
T 3ko8_A           64 -DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKA  142 (312)
T ss_dssp             -SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             -CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHH
Confidence             999999983                5778999999999999999999999999999887888888776553    4566


Q ss_pred             HHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC-CCcccCCCCCcceeeeeHHHHHHHHHHHhcC---
Q 018900          213 QVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN---  284 (349)
Q Consensus       213 ~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~---  284 (349)
                      .+|+++++    .+++++++||+++|||+.....+..++..+..+ .++.+++++++.++++|++|+|++++.++++   
T Consensus       143 ~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~  222 (312)
T 3ko8_A          143 AGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEE  222 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccc
Confidence            67776654    499999999999999998777777888888777 4567889999999999999999999999988   


Q ss_pred             CCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----------cCCCccc---cCCCccce
Q 018900          285 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----------AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       285 ~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~k---~~g~~p~~  342 (349)
                      +.. .+++||+++++.+++.|+++.+.+.+|.+.++..++...           ...+..|   .+||+|++
T Consensus       223 ~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  293 (312)
T 3ko8_A          223 MDA-PFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTM  293 (312)
T ss_dssp             SCC-SEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSS
T ss_pred             cCC-CCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCC
Confidence            332 248999999999999999999999999988877654321           1233333   49999985

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=6.2e-36  Score=282.63  Aligned_cols=232  Identities=24%  Similarity=0.277  Sum_probs=193.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh----hhHH
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVG  145 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~l~  145 (349)
                      ..+||+||||    ||+||||++|+++|+++ ||+|++++|+.+....+.          ...+++++.+|.    +.+.
T Consensus        21 ~m~~~~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------~~~~v~~~~~Dl~~d~~~~~   86 (372)
T 3slg_A           21 SMKAKKVLIL----GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----------KHERMHFFEGDITINKEWVE   86 (372)
T ss_dssp             --CCCEEEEE----SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----------GSTTEEEEECCTTTCHHHHH
T ss_pred             ccCCCEEEEE----CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----------cCCCeEEEeCccCCCHHHHH
Confidence            3457899999    99999999999999998 999999999875443221          124677888774    4567


Q ss_pred             hhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC----
Q 018900          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----  205 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~----  205 (349)
                      +++++  +|+|||+|+.                |+.++.+++++|++.+ +||||+||.++||.....++.|+...    
T Consensus        87 ~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~  163 (372)
T 3slg_A           87 YHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYG  163 (372)
T ss_dssp             HHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEEC
T ss_pred             HHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccC
Confidence            77765  5999999983                5678899999999999 99999999999999877788887744    


Q ss_pred             ---C----CCCChHHHHHHHHhh---CCcEEEEecCceeeCCCCC---------CchHHHHHHHHhCCCcccCCCCCcce
Q 018900          206 ---K----PDAGHVQVEKYISEN---FSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       206 ---~----~~~~k~~~ek~~~~~---~~~~~ilR~~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                         .    +..+|+.+|++++++   +++++++||+++|||+...         .++..++..+..+.++.+++++++.+
T Consensus       164 p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  243 (372)
T 3slg_A          164 PINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKR  243 (372)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEE
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEE
Confidence               1    235678888888877   8999999999999998652         26778889999999999999899999


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeC-CCccCHHHHHHHHHHHhCCCce
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS-DRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~-~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      +|+|++|+|++++.+++++.. ..+++||+++ ++.+|+.|+++.+.+.+|.+++
T Consensus       244 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~  298 (372)
T 3slg_A          244 AFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE  298 (372)
T ss_dssp             ECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred             EEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence            999999999999999998752 2358999999 4899999999999999997654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=4.7e-35  Score=273.94  Aligned_cols=248  Identities=20%  Similarity=0.285  Sum_probs=202.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ..++|+||||    ||+||||++|+++|+++|++|++++|....                 .+++++.+|   .+.+.++
T Consensus        16 ~~~~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A           16 PRGSHMILVT----GSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             -----CEEEE----TTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHH
T ss_pred             ccCCCEEEEE----CCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHH
Confidence            3457899999    999999999999999999999999998643                 245666666   6778888


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCC--CCCCCCCCCCCCCCC---
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP--ADEPPHVEGDVVKPD---  208 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~--~~~~~~~e~~~~~~~---  208 (349)
                      +.+  +|+|||+|+.              |+.++.+++++|++.++++|||+||.++||.  ....++.|+.+..+.   
T Consensus        75 ~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y  152 (347)
T 4id9_A           75 IMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPY  152 (347)
T ss_dssp             HTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHH
T ss_pred             HhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChH
Confidence            875  5999999983              5678999999999999999999999999998  566788888776553   


Q ss_pred             -CChHHHHHHHHh----hCCcEEEEecCcee-------------eCCCC------------CCchHHHHHHHHhCCCccc
Q 018900          209 -AGHVQVEKYISE----NFSNWASFRPQYMI-------------GSGNN------------KDCEEWFFDRIVRKRPVPI  258 (349)
Q Consensus       209 -~~k~~~ek~~~~----~~~~~~ilR~~~v~-------------g~~~~------------~~~~~~~~~~~~~~~~~~~  258 (349)
                       .+|..+|+++++    .+++++++||+++|             ||+..            ..++..++..+..+.++.+
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (347)
T 4id9_A          153 GLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHI  232 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEE
Confidence             456777777753    48999999999999             87643            2356677788888888888


Q ss_pred             CCCCCcceee----eeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc--CCCc
Q 018900          259 PGSGMQFTNI----AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA--GIDA  332 (349)
Q Consensus       259 ~~~~~~~~~~----i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~--~~~~  332 (349)
                      ++++++.++|    +|++|+|++++.+++++... +++||+++++.+|+.|+++.+++.+|.++++..+|....  ..+.
T Consensus       233 ~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~d~  311 (347)
T 4id9_A          233 LARNENGRPFRMHITDTRDMVAGILLALDHPEAA-GGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDGVYYHTSN  311 (347)
T ss_dssp             EEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGT-TEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCCCBCCBCC
T ss_pred             eCCCCcccCCccCcEeHHHHHHHHHHHhcCcccC-CCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcccccccCH
Confidence            8888888999    99999999999999998544 489999999999999999999999999988877766542  3344


Q ss_pred             cc---cCCCccce
Q 018900          333 KK---AFPFRNMV  342 (349)
Q Consensus       333 ~k---~~g~~p~~  342 (349)
                      .|   .+||+|++
T Consensus       312 ~k~~~~lG~~p~~  324 (347)
T 4id9_A          312 ERIRNTLGFEAEW  324 (347)
T ss_dssp             HHHHHHHCCCCCC
T ss_pred             HHHHHHhCCCCCC
Confidence            33   49999985

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-34  Score=267.33  Aligned_cols=249  Identities=18%  Similarity=0.267  Sum_probs=194.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh--hhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~l~~~~~~~  151 (349)
                      ||+||||    ||+||||++|+++|+++| .+++++|......+           ....+++++.+|.  +++.+++++ 
T Consensus         1 M~~vlVT----GatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~-   63 (313)
T 3ehe_A            1 MSLIVVT----GGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE-----------FVNEAARLVKADLAADDIKDYLKG-   63 (313)
T ss_dssp             --CEEEE----TTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG-----------GSCTTEEEECCCTTTSCCHHHHTT-
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh-----------hcCCCcEEEECcCChHHHHHHhcC-
Confidence            5789999    999999999999999999 45555544322211           1123556666663  556667765 


Q ss_pred             CccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CCh
Q 018900          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGH  211 (349)
Q Consensus       152 ~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k  211 (349)
                       +|+|||+|+.                |+.++.+++++|++.++++|||+||.++||.....++.|+.+..+.    .+|
T Consensus        64 -~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK  142 (313)
T 3ehe_A           64 -AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASK  142 (313)
T ss_dssp             -CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             -CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHH
Confidence             5999999982                5778999999999999999999999999998887888888766543    456


Q ss_pred             HHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC-CCcccCCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 018900          212 VQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  286 (349)
Q Consensus       212 ~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  286 (349)
                      ..+|.+++.    ++++++++||+++|||+....++..++..+..+ .++.+++++++.++|+|++|+|++++.+++...
T Consensus       143 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  222 (313)
T 3ehe_A          143 LACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE  222 (313)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC
Confidence            667776654    489999999999999988777777888888777 566788999999999999999999999999433


Q ss_pred             ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc--------cCCCcc--ccCCCccce
Q 018900          287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA--------AGIDAK--KAFPFRNMV  342 (349)
Q Consensus       287 ~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~--------~~~~~~--k~~g~~p~~  342 (349)
                      .  +++||+++++.+++.|+++.+++.+|.+.++...+...        ...+..  +.+||+|++
T Consensus       223 ~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  286 (313)
T 3ehe_A          223 R--VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRY  286 (313)
T ss_dssp             S--EEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHHHHTCCCSC
T ss_pred             C--CceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHHHcCCCCCC
Confidence            3  48999999999999999999999999988776544321        122333  349999985

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.3e-34  Score=264.93  Aligned_cols=248  Identities=13%  Similarity=0.135  Sum_probs=196.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .+||+||||    ||+||||++|+++|+++|+      +.....           ..+  ..+..+..|.+.+.+++++.
T Consensus         4 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~------~~~~~~-----------~~~--~~~~~D~~d~~~~~~~~~~~   60 (319)
T 4b8w_A            4 FQSMRILVT----GGSGLVGKAIQKVVADGAG------LPGEDW-----------VFV--SSKDADLTDTAQTRALFEKV   60 (319)
T ss_dssp             CCCCEEEEE----TCSSHHHHHHHHHHHTTTC------CTTCEE-----------EEC--CTTTCCTTSHHHHHHHHHHS
T ss_pred             ccCCeEEEE----CCCcHHHHHHHHHHHhcCC------cccccc-----------ccc--CceecccCCHHHHHHHHhhc
Confidence            357899999    9999999999999999998      111100           000  01122334678899999886


Q ss_pred             CccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC----CCCCC--
Q 018900          152 TFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPD--  208 (349)
Q Consensus       152 ~~d~Vi~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~~--  208 (349)
                      ++|+|||+|+.                 |+.++.+++++|++.+++||||+||.++||.....+++|+.    +..+.  
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~  140 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNF  140 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSH
T ss_pred             CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcc
Confidence            78999999984                 46789999999999999999999999999998878888886    33332  


Q ss_pred             ---CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHH----HHhCCCcccCCCCCcceeeeeHH
Q 018900          209 ---AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDR----IVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       209 ---~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         .+|..+|+++++    .+++++++||+++|||+...     .++..++..    +..+.++.+++++++.++|+|++
T Consensus       141 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (319)
T 4b8w_A          141 GYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSL  220 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHH
Confidence               346677776654    59999999999999998753     256666666    77899999999999999999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cCCCccce
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AFPFRNMV  342 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~g~~p~~  342 (349)
                      |+|++++.+++++....+++||+++++.+++.|+++.+.+.+|.+.++...+....     ..+..|   .+||+|..
T Consensus       221 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~  298 (319)
T 4b8w_A          221 DLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFT  298 (319)
T ss_dssp             HHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCC
T ss_pred             HHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCC
Confidence            99999999999865544589999999999999999999999999888776654432     233333   39999875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2e-34  Score=266.20  Aligned_cols=248  Identities=21%  Similarity=0.289  Sum_probs=199.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcChhhHHhhhcC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .++|+||||    ||+||||++|+++|+++|++|++++|..........    .... ....+++++.+|..        
T Consensus         5 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~--------   68 (321)
T 3vps_A            5 TLKHRILIT----GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPE----GTGKFLEKPVLELEERDLS--------   68 (321)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCT----TSSEEECSCGGGCCHHHHT--------
T ss_pred             cCCCeEEEE----CCCChHHHHHHHHHHHCCCEEEEEecCCcccccchh----hhhhhccCCCeeEEeCccc--------
Confidence            357899999    999999999999999999999999998752111000    1111 11234455544443        


Q ss_pred             CCccEEEeCCCC---------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CCh
Q 018900          151 VTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGH  211 (349)
Q Consensus       151 ~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k  211 (349)
                       ++|+|||+|+.               |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+.    .+|
T Consensus        69 -~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK  147 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK  147 (321)
T ss_dssp             -TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred             -cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHH
Confidence             57999999983               5678999999999999999999999999999887889998876654    456


Q ss_pred             HHHHHHHHh----hCC-cEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCC
Q 018900          212 VQVEKYISE----NFS-NWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  285 (349)
Q Consensus       212 ~~~ek~~~~----~~~-~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  285 (349)
                      +.+|+++++    .++ +++++||+++|||+.... ++..++..+..++++.+++++++.++|+|++|+|++++.+++++
T Consensus       148 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~  227 (321)
T 3vps_A          148 VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP  227 (321)
T ss_dssp             HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC
Confidence            777777766    488 999999999999987653 67788888889999999999999999999999999999999988


Q ss_pred             CccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cCCCcc
Q 018900          286 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AFPFRN  340 (349)
Q Consensus       286 ~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~g~~p  340 (349)
                      ..  | +||+++++.+++.|+++.+. .+|.+.++...+....     ..+..|   .+||+|
T Consensus       228 ~~--g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  286 (321)
T 3vps_A          228 LP--S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERS  286 (321)
T ss_dssp             CC--S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCS
T ss_pred             CC--C-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCC
Confidence            76  4 99999999999999999999 9999988877665432     233333   399999

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.1e-34  Score=264.25  Aligned_cols=220  Identities=17%  Similarity=0.236  Sum_probs=182.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .|||+||||    |+ ||||++|+++|+++||+|++++|+.+...           .+...+++++.+|..+++  +.+ 
T Consensus         3 ~m~~~ilVt----Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~D~~d~~--~~~-   63 (286)
T 3ius_A            3 AMTGTLLSF----GH-GYTARVLSRALAPQGWRIIGTSRNPDQME-----------AIRASGAEPLLWPGEEPS--LDG-   63 (286)
T ss_dssp             --CCEEEEE----TC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-----------HHHHTTEEEEESSSSCCC--CTT-
T ss_pred             CCcCcEEEE----CC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-----------hHhhCCCeEEEecccccc--cCC-
Confidence            467899999    98 99999999999999999999999874332           233457889999977765  444 


Q ss_pred             CccEEEeCCCCC---hhhHHHHHHHHHh--CCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHHHHHHHhh-
Q 018900          152 TFDVVLDNNGKN---LDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISEN-  221 (349)
Q Consensus       152 ~~d~Vi~~a~~~---~~~~~~ll~~a~~--~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~ek~~~~~-  221 (349)
                       +|+|||+|+..   ...+.++++++++  .+++||||+||.++||.....+++|+.+..+.    .+|+.+|+++.++ 
T Consensus        64 -~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  142 (286)
T 3ius_A           64 -VTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVP  142 (286)
T ss_dssp             -CCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHST
T ss_pred             -CCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhc
Confidence             69999999954   3457899999998  68899999999999999887788888877654    4577788899888 


Q ss_pred             CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCcc
Q 018900          222 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (349)
Q Consensus       222 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~  301 (349)
                      +++++++||+++||++...      +..+..+.+..+.++ ++.++|+|++|+|++++.+++++..  +++||+++++.+
T Consensus       143 ~~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~~  213 (286)
T 3ius_A          143 NLPLHVFRLAGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDP--GAVYNVCDDEPV  213 (286)
T ss_dssp             TCCEEEEEECEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCT--TCEEEECCSCCB
T ss_pred             CCCEEEEeccceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCC--CCEEEEeCCCCc
Confidence            9999999999999998654      344556776666664 5778999999999999999999874  589999999999


Q ss_pred             CHHHHHHHHHHHhCCCcee
Q 018900          302 TLDGMAKLCAQAAGLPVEI  320 (349)
Q Consensus       302 t~~el~~~~~~~~g~~~~~  320 (349)
                      ++.|+++.+++.+|.+...
T Consensus       214 s~~e~~~~i~~~~g~~~~~  232 (286)
T 3ius_A          214 PPQDVIAYAAELQGLPLPP  232 (286)
T ss_dssp             CHHHHHHHHHHHHTCCCCC
T ss_pred             cHHHHHHHHHHHcCCCCCc
Confidence            9999999999999987553

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=8e-34  Score=267.37  Aligned_cols=260  Identities=15%  Similarity=0.258  Sum_probs=203.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHh--CCCeEEEEEcCCCCccc--CCCCCCCcccceecCCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG--SGHEVTIMTVGDENSDK--MKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~--~g~~V~~l~R~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~D---~~~l  144 (349)
                      .++|+||||    ||+||||++|+++|++  +|++|++++|.......  ...........+...+++++.+|   .+++
T Consensus         8 ~~~~~vlVT----GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            8 LENQTILIT----GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            356899999    9999999999999999  99999999997641110  00001112223334567788887   5566


Q ss_pred             HhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC--
Q 018900          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--  208 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~--  208 (349)
                      .++ ...++|+|||+|+.              |+.++.+++++|++.+++ |||+||.++||.... +++|+.+..+.  
T Consensus        84 ~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~  160 (362)
T 3sxp_A           84 RRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENV  160 (362)
T ss_dssp             HHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSH
T ss_pred             HHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCCh
Confidence            666 22347999999993              578899999999999986 999999999998776 88888876653  


Q ss_pred             --CChHHHHHHHHhhC--CcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          209 --AGHVQVEKYISENF--SNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       209 --~~k~~~ek~~~~~~--~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                        .+|..+|++++++.  ++++++||+++|||+...     .++..++..+..+.++.+++++++.++|+|++|+|++++
T Consensus       161 Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~  240 (362)
T 3sxp_A          161 YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANV  240 (362)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHH
Confidence              45677777777765  789999999999998754     467788888889998888898889999999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC------ccCCCccc---cCCCccce
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK------AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~------~~~~~~~k---~~g~~p~~  342 (349)
                      .+++++..  | +||+++++.+++.|+++.+++.+| +.++...|.+      ....+..|   .+||+|.+
T Consensus       241 ~~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  308 (362)
T 3sxp_A          241 KAMKAQKS--G-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLY  308 (362)
T ss_dssp             HHTTCSSC--E-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHHHHHHHCCCCCC
T ss_pred             HHHhcCCC--C-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHHHHHHhCCCCCC
Confidence            99998753  4 999999999999999999999999 8777766644      12334443   49999984

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-34  Score=267.83  Aligned_cols=261  Identities=18%  Similarity=0.213  Sum_probs=200.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+||||++++++|+++|++|++++|..+...+..    ..+......+++++.+|   .+++.++++
T Consensus         4 ~~~~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (341)
T 3enk_A            4 TKGTILVT----GGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAI----ARIEKITGKTPAFHETDVSDERALARIFD   75 (341)
T ss_dssp             SSCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHH----HHHHHHHSCCCEEECCCTTCHHHHHHHHH
T ss_pred             CCcEEEEe----cCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHH----HHHHhhcCCCceEEEeecCCHHHHHHHHh
Confidence            46799999    99999999999999999999999999875442210    00111113356677776   677888887


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----C
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----A  209 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~  209 (349)
                      ..++|+|||+|+.                |+.++.+++++|++.++++||++||.++||.....+++|+.+..+.    .
T Consensus        76 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~  155 (341)
T 3enk_A           76 AHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQ  155 (341)
T ss_dssp             HSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHH
T ss_pred             ccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHH
Confidence            5567999999984                5678999999999999999999999999998877888888876543    4


Q ss_pred             ChHHHHHHHHhh-----CCcEEEEecCceeeCCCC-----------CCchHHHHHHHHhC--CCcccCC------CCCcc
Q 018900          210 GHVQVEKYISEN-----FSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIVRK--RPVPIPG------SGMQF  265 (349)
Q Consensus       210 ~k~~~ek~~~~~-----~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~--~~~~~~~------~~~~~  265 (349)
                      +|..+|++++.+     +++++++||+++|||+..           ..++. ++.....+  .++.++|      ++++.
T Consensus       156 sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~  234 (341)
T 3enk_A          156 TKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMP-YVAQVAVGKLEKLRVFGSDYPTPDGTGV  234 (341)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHH-HHHHHHHTSSSCEEEECSCSSSTTSSCE
T ss_pred             HHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHH-HHHHHHhcCCCceEEeCCccCCCCCCee
Confidence            566777776653     499999999999999642           12333 34444443  4556666      78889


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cC
Q 018900          266 TNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AF  336 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~  336 (349)
                      ++|+|++|+|++++.+++++. ...+++||+++++.+++.|+++.+.+.+|.+.++...+....     ..+..|   .+
T Consensus       235 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  314 (341)
T 3enk_A          235 RDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETI  314 (341)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHH
T ss_pred             EeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHc
Confidence            999999999999999998742 223589999999999999999999999999888777665432     233333   49


Q ss_pred             CCccce
Q 018900          337 PFRNMV  342 (349)
Q Consensus       337 g~~p~~  342 (349)
                      ||+|++
T Consensus       315 G~~p~~  320 (341)
T 3enk_A          315 GWKAER  320 (341)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999965

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-33  Score=262.75  Aligned_cols=254  Identities=18%  Similarity=0.251  Sum_probs=195.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||+||||++++++|+++|++|++++|......+          .+ ..+++++.+|   .+.+.++++.
T Consensus         1 M~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~-~~~~~~~~~D~~~~~~~~~~~~~   65 (330)
T 2c20_A            1 MNSILIC----GGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED----------AI-TEGAKFYNGDLRDKAFLRDVFTQ   65 (330)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----------GS-CTTSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh----------hc-CCCcEEEECCCCCHHHHHHHHhh
Confidence            5789999    999999999999999999999999997643211          11 1256777777   5667778874


Q ss_pred             CCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CC
Q 018900          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AG  210 (349)
Q Consensus       151 ~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~  210 (349)
                      .++|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+.    .+
T Consensus        66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~s  145 (330)
T 2c20_A           66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGET  145 (330)
T ss_dssp             SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHH
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHH
Confidence            457999999983                4678999999999999999999999999998777788888776542    45


Q ss_pred             hHHHHHHHHhh----CCcEEEEecCceeeCCCC----------CCchHHHHHHHHh-CCCcccCC------CCCcceeee
Q 018900          211 HVQVEKYISEN----FSNWASFRPQYMIGSGNN----------KDCEEWFFDRIVR-KRPVPIPG------SGMQFTNIA  269 (349)
Q Consensus       211 k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~----------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i  269 (349)
                      |..+|++++++    +++++++||+++||++..          ..++..++..+.. +.++.++|      ++++.++|+
T Consensus       146 K~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v  225 (330)
T 2c20_A          146 KLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYI  225 (330)
T ss_dssp             HHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEE
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeE
Confidence            77777777653    899999999999999631          2244444444433 33456665      677889999


Q ss_pred             eHHHHHHHHHHHhcCCCcc-CCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc---cCCCcc
Q 018900          270 HVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK---AFPFRN  340 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~-~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k---~~g~~p  340 (349)
                      |++|+|++++.+++++... .+++||+++++.+++.|+++.+.+.+|.++++...+...     ...+..|   .+||+|
T Consensus       226 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  305 (330)
T 2c20_A          226 HVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDP  305 (330)
T ss_dssp             EHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSCCSEECBCCHHHHHHHCCCC
T ss_pred             eHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCcccccccCHHHHHHHhCCCC
Confidence            9999999999999875432 248999999999999999999999999987776654322     2233333   499999


Q ss_pred             ce
Q 018900          341 MV  342 (349)
Q Consensus       341 ~~  342 (349)
                      ++
T Consensus       306 ~~  307 (330)
T 2c20_A          306 RY  307 (330)
T ss_dssp             SC
T ss_pred             cc
Confidence            85

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-34  Score=260.80  Aligned_cols=237  Identities=16%  Similarity=0.163  Sum_probs=196.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      |+|+||||    ||+||||++++++|+++|++|++++|..-                       +..|.+.+.++++..+
T Consensus         4 M~m~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~-----------------------D~~d~~~~~~~~~~~~   56 (287)
T 3sc6_A            4 MKERVIIT----GANGQLGKQLQEELNPEEYDIYPFDKKLL-----------------------DITNISQVQQVVQEIR   56 (287)
T ss_dssp             -CEEEEEE----STTSHHHHHHHHHSCTTTEEEEEECTTTS-----------------------CTTCHHHHHHHHHHHC
T ss_pred             ceeEEEEE----CCCCHHHHHHHHHHHhCCCEEEEeccccc-----------------------CCCCHHHHHHHHHhcC
Confidence            44599999    99999999999999999999999999431                       1127788888888656


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChH
Q 018900          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       153 ~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~  212 (349)
                      +|+|||+|+.                |+.++.+++++|++.++ ||||+||..+|+.....+++|+++..+.    .+|.
T Consensus        57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~  135 (287)
T 3sc6_A           57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKY  135 (287)
T ss_dssp             CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHH
T ss_pred             CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence            7999999983                46778999999999998 7999999999998877889998877654    4677


Q ss_pred             HHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCE
Q 018900          213 QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (349)
Q Consensus       213 ~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  292 (349)
                      .+|+++++++.+++++||+++|||+.. .++..++..+..+.++.++++  +.++++|++|+|++++.+++++.   +++
T Consensus       136 ~~E~~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~---~~~  209 (287)
T 3sc6_A          136 AGEQFVKELHNKYFIVRTSWLYGKYGN-NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL---YGT  209 (287)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEECSSSC-CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC---CEE
T ss_pred             HHHHHHHHhCCCcEEEeeeeecCCCCC-cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC---CCe
Confidence            788888888889999999999999754 467777777777888887764  77899999999999999999876   379


Q ss_pred             EEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC----------ccCCCccc--cCCCcccee
Q 018900          293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK----------AAGIDAKK--AFPFRNMVF  343 (349)
Q Consensus       293 ~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~----------~~~~~~~k--~~g~~p~~~  343 (349)
                      ||+++++.+++.|+++.+++.+|.++++..++..          ....+..|  .+||+|..-
T Consensus       210 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~  272 (287)
T 3sc6_A          210 YHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPS  272 (287)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCB
T ss_pred             EEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCcc
Confidence            9999999999999999999999999887765421          11233333  599998763

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1e-33  Score=262.01  Aligned_cols=250  Identities=19%  Similarity=0.208  Sum_probs=198.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+||||++++++|+++|++|++++|+... ..           +   +++++.+|   .+++.+++
T Consensus        10 ~~~~~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l---~~~~~~~Dl~d~~~~~~~~   70 (321)
T 2pk3_A           10 HGSMRALIT----GVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------P---NVEMISLDIMDSQRVKKVI   70 (321)
T ss_dssp             ---CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------T---TEEEEECCTTCHHHHHHHH
T ss_pred             cCcceEEEE----CCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------c---eeeEEECCCCCHHHHHHHH
Confidence            357899999    999999999999999999999999998643 11           1   45666666   67778888


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCcEEEEeccccccCCC--CCCCCCCCCCCCCC-
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPD-  208 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~--~~~~~~e~~~~~~~-  208 (349)
                      ++.++|+|||+|+.                |+.++.+++++|++. ++++||++||..+|+..  ...+++|+.+..+. 
T Consensus        71 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~  150 (321)
T 2pk3_A           71 SDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMS  150 (321)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCS
T ss_pred             HhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCC
Confidence            76457999999983                457799999999876 68999999999999976  55678888765443 


Q ss_pred             ---CChHHHHHHHHhh----CCcEEEEecCceeeCCCCCC-chHHHHHHHHh---C--CCcccCCCCCcceeeeeHHHHH
Q 018900          209 ---AGHVQVEKYISEN----FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVR---K--RPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       209 ---~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                         .+|..+|++++++    +++++++||+++|||+.... ++..++..+..   +  .++.+++++++.++++|++|+|
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva  230 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence               4577777777654    89999999999999987653 55666666666   6  5677788888889999999999


Q ss_pred             HHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCC--C-----ccCCCccc---cCCCccce
Q 018900          276 SMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP--K-----AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~--~-----~~~~~~~k---~~g~~p~~  342 (349)
                      ++++.+++++.  .|++||+++++.+++.|+++.+.+.+|.+.++...|.  .     ....+..|   .+||+|++
T Consensus       231 ~a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~  305 (321)
T 2pk3_A          231 QAYWLLSQYGK--TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRI  305 (321)
T ss_dssp             HHHHHHHHHCC--TTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCS
T ss_pred             HHHHHHHhCCC--CCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCC
Confidence            99999998763  2589999999999999999999999999887766551  1     12233333   38999984

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=6.2e-34  Score=259.48  Aligned_cols=239  Identities=17%  Similarity=0.234  Sum_probs=192.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    | +||||++|+++|+++|++|++++|+.+..               ..+++++.+|   .+++.++++
T Consensus         2 ~~~~ilVt----G-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~   61 (286)
T 3gpi_A            2 SLSKILIA----G-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVH   61 (286)
T ss_dssp             CCCCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGG
T ss_pred             CCCcEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhc
Confidence            36799999    9 59999999999999999999999987532               1367777777   566777776


Q ss_pred             CCCccEEEeCCC-----------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          150 GVTFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       150 ~~~~d~Vi~~a~-----------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      + ++|+|||+|+           .|+.++.+++++|++.+++||||+||.++||.....++.|+.+..+.    .+|..+
T Consensus        62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~  140 (286)
T 3gpi_A           62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEA  140 (286)
T ss_dssp             G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHH
T ss_pred             C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence            5 3799999987           47899999999999999999999999999999887888888877653    467788


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCC-ccCCCEE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIF  293 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~  293 (349)
                      |++ .++ ++++++||+++||++..     .++..+.. .  ..++++++.++|+|++|+|++++.+++++. ...+++|
T Consensus       141 E~~-~~~-~~~~ilR~~~v~G~~~~-----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~  210 (286)
T 3gpi_A          141 EAL-LAA-YSSTILRFSGIYGPGRL-----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLY  210 (286)
T ss_dssp             HHH-GGG-SSEEEEEECEEEBTTBC-----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEE
T ss_pred             HHH-Hhc-CCeEEEecccccCCCch-----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceE
Confidence            888 777 99999999999999865     34555555 2  334778888999999999999999999852 1235899


Q ss_pred             EeeCCCccCHHHHHHHHHHHhCCCceeEEcCC--CccCCCccc--cCCCccce
Q 018900          294 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP--KAAGIDAKK--AFPFRNMV  342 (349)
Q Consensus       294 ~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~--~~~~~~~~k--~~g~~p~~  342 (349)
                      |+++++.+++.|+++.+++.+|.+.++...+.  .....+..|  .+||+|++
T Consensus       211 ~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  263 (286)
T 3gpi_A          211 IVTDNQPLPVHDLLRWLADRQGIAYPAGATPPVQGNKKLSNARLLASGYQLIY  263 (286)
T ss_dssp             EECCSCCEEHHHHHHHHHHHTTCCCCCSCCCCBCSSCEECCHHHHHTTCCCSS
T ss_pred             EEeCCCCCCHHHHHHHHHHHcCCCCCCCCCcccCCCeEeeHHHHHHcCCCCcC
Confidence            99999999999999999999998876554331  112233333  59999985

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=9.9e-34  Score=265.67  Aligned_cols=264  Identities=19%  Similarity=0.180  Sum_probs=201.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-CCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .++|+||||    ||+||||++++++|+++|++|++++|......+ +... ...+......+++++.+|   .+++.++
T Consensus        25 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   99 (352)
T 1sb8_A           25 AQPKVWLIT----GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNA   99 (352)
T ss_dssp             HSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred             ccCCeEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH-hhhcccccCCceEEEECCCCCHHHHHHH
Confidence            357899999    999999999999999999999999997632110 0000 000000012467778887   5667788


Q ss_pred             hcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC---
Q 018900          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---  208 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~---  208 (349)
                      +++  +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+.   
T Consensus       100 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y  177 (352)
T 1sb8_A          100 CAG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY  177 (352)
T ss_dssp             HTT--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred             hcC--CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChh
Confidence            875  5999999983                4678999999999999999999999999998776788888776543   


Q ss_pred             -CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          209 -AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       209 -~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                       .+|..+|++++.    .+++++++||+++|||+...     .++..++..+..+.++.+++++++.++|+|++|+|+++
T Consensus       178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~  257 (352)
T 1sb8_A          178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN  257 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence             356777777654    48999999999999998653     35667788888898888888888999999999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHh---CCCceeE--EcCCC-----ccCCCccc---cCCCccce
Q 018900          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA---GLPVEIV--HYDPK-----AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~---g~~~~~~--~~~~~-----~~~~~~~k---~~g~~p~~  342 (349)
                      +.++++.....+++||+++++.+|+.|+++.+.+.+   |.+....  ..+..     ....+..|   .+||+|++
T Consensus       258 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  334 (352)
T 1sb8_A          258 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKY  334 (352)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred             HHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCC
Confidence            999987433345899999999999999999999999   9875521  22211     12233333   49999974

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=3e-33  Score=257.84  Aligned_cols=249  Identities=22%  Similarity=0.294  Sum_probs=195.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+||||++++++|+++|++|++++|.......          .+ ..+++++.+|   .+++.++++..
T Consensus         1 m~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~----------~~-~~~~~~~~~Dl~~~~~~~~~~~~~   65 (311)
T 2p5y_A            1 MRVLVT----GGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE----------NV-PKGVPFFRVDLRDKEGVERAFREF   65 (311)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG----------GS-CTTCCEECCCTTCHHHHHHHHHHH
T ss_pred             CEEEEE----eCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh----------hc-ccCeEEEECCCCCHHHHHHHHHhc
Confidence            479999    999999999999999999999999985432211          01 1245666666   56777777743


Q ss_pred             CccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccc-cccCC-CCCCCCCCCCCCCCC----C
Q 018900          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSA-GIYKP-ADEPPHVEGDVVKPD----A  209 (349)
Q Consensus       152 ~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~-~vy~~-~~~~~~~e~~~~~~~----~  209 (349)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||. .+||. ....++.|+.+..+.    .
T Consensus        66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~  145 (311)
T 2p5y_A           66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAA  145 (311)
T ss_dssp             CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHH
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHH
Confidence            57999999983                46778999999999999999999998 89986 445577777665442    4


Q ss_pred             ChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC----chHHHHHHHHhCCCcccC-----CCCCcceeeeeHHHHHH
Q 018900          210 GHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIP-----GSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       210 ~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~Dva~  276 (349)
                      +|..+|++++.    .+++++++||+++|||+....    ++..++..+..+.++.++     +++.+.++|+|++|+|+
T Consensus       146 sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  225 (311)
T 2p5y_A          146 SKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE  225 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence            57777776653    489999999999999986532    466677888888887777     88888899999999999


Q ss_pred             HHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc--cCCCccce
Q 018900          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK--AFPFRNMV  342 (349)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k--~~g~~p~~  342 (349)
                      +++.+++++    +++||+++++.+|+.|+++.+++.+|.++++...+...     ...+..|  .+||+|.+
T Consensus       226 a~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~  294 (311)
T 2p5y_A          226 AHALALFSL----EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKV  294 (311)
T ss_dssp             HHHHHHHHC----CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSS
T ss_pred             HHHHHHhCC----CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHHCCCCCCC
Confidence            999999874    48999999999999999999999999987776665432     2233332  29999975

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=7.5e-33  Score=258.96  Aligned_cols=265  Identities=18%  Similarity=0.180  Sum_probs=198.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce---ecCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D---~~~l~~  146 (349)
                      |+|+||||    ||+||||++++++|+++|++|++++|.....+.... ......++   ...+++++.+|   .+++.+
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   75 (348)
T 1ek6_A            1 MAEKVLVT----GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGS-LPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (348)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSS-SBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccc-cHHHHHHHHhccCCceEEEECCCCCHHHHHH
Confidence            56899999    999999999999999999999999986543110000 00011111   12467777777   566777


Q ss_pred             hhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC--
Q 018900          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--  208 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~--  208 (349)
                      +++..++|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+.+..+.  
T Consensus        76 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~  155 (348)
T 1ek6_A           76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTN  155 (348)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSS
T ss_pred             HHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCC
Confidence            7774457999999984                4678999999999999999999999999998777788888765542  


Q ss_pred             ---CChHHHHHHHHhh---C--CcEEEEecCceeeCCC-----------CCCchHHHHHHHH-hCCCcccCC------CC
Q 018900          209 ---AGHVQVEKYISEN---F--SNWASFRPQYMIGSGN-----------NKDCEEWFFDRIV-RKRPVPIPG------SG  262 (349)
Q Consensus       209 ---~~k~~~ek~~~~~---~--~~~~ilR~~~v~g~~~-----------~~~~~~~~~~~~~-~~~~~~~~~------~~  262 (349)
                         .+|..+|++++++   +  ++++++||+++|||+.           ...++..++..+. .+.++.+++      ++
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  235 (348)
T 1ek6_A          156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG  235 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred             chHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCC
Confidence               3566677766553   4  9999999999999953           1224555555555 466666666      57


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc--
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK--  334 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k--  334 (349)
                      ++.++|+|++|+|++++.+++++. ..++++||+++++.+++.|+++.+.+.+|.++++...+...     ...+..|  
T Consensus       236 ~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~  315 (348)
T 1ek6_A          236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQ  315 (348)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHH
T ss_pred             ceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCccchhhccCHHHHH
Confidence            788999999999999999998753 22237999999999999999999999999987776655432     1233333  


Q ss_pred             -cCCCccce
Q 018900          335 -AFPFRNMV  342 (349)
Q Consensus       335 -~~g~~p~~  342 (349)
                       .+||+|++
T Consensus       316 ~~lG~~p~~  324 (348)
T 1ek6_A          316 EELGWTAAL  324 (348)
T ss_dssp             HTTCCCCCC
T ss_pred             HhcCCCCCC
Confidence             49999974

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=2.3e-33  Score=265.81  Aligned_cols=252  Identities=15%  Similarity=0.193  Sum_probs=190.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|+||||    ||+||||++|+++|+++| ++|++++|......+..       .  ...+++++.+|   ++++.+++
T Consensus        31 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l-------~--~~~~v~~~~~Dl~d~~~l~~~~   97 (377)
T 2q1s_A           31 ANTNVMVV----GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV-------P--DHPAVRFSETSITDDALLASLQ   97 (377)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS-------C--CCTTEEEECSCTTCHHHHHHCC
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc-------c--CCCceEEEECCCCCHHHHHHHh
Confidence            46899999    999999999999999999 99999999764332100       0  12356777777   56677777


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhC-CCcEEEEeccccccCCCCCCCCC--CCC---CC-
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV--EGD---VV-  205 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~~~~~~~--e~~---~~-  205 (349)
                      ++  +|+|||+|+.                |+.++.+++++|++. ++++|||+||.++||.....++.  |+.   +. 
T Consensus        98 ~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~  175 (377)
T 2q1s_A           98 DE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLH  175 (377)
T ss_dssp             SC--CSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSS
T ss_pred             hC--CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccccccc
Confidence            64  6999999984                356899999999999 89999999999999987666777  766   33 


Q ss_pred             CC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCC---------C-----CCchHHHHHHHHhCCCcccCCCCC
Q 018900          206 KP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGN---------N-----KDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       206 ~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      .+    ..+|..+|+++++    .+++++++||+++||++.         .     ..++..++..+..+.++.++++++
T Consensus       176 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~  255 (377)
T 2q1s_A          176 NNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGV  255 (377)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCC
Confidence            22    2456777777765    389999999999999987         3     346777888888898888888888


Q ss_pred             cceeeeeHHHHHHH-HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC------ccCCCccc--
Q 018900          264 QFTNIAHVRDLSSM-LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK------AAGIDAKK--  334 (349)
Q Consensus       264 ~~~~~i~v~Dva~~-~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~------~~~~~~~k--  334 (349)
                      +.++|+|++|+|++ ++.+++++.  .| +||+++++.+++.|+++.+.+.+|.+.++...|..      ....+..|  
T Consensus       256 ~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~  332 (377)
T 2q1s_A          256 ATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKAR  332 (377)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHH
T ss_pred             eEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHH
Confidence            99999999999999 999998865  45 99999999999999999999999988766554432      22233333  


Q ss_pred             -cCCCccce
Q 018900          335 -AFPFRNMV  342 (349)
Q Consensus       335 -~~g~~p~~  342 (349)
                       .+||+|.+
T Consensus       333 ~~lG~~p~~  341 (377)
T 2q1s_A          333 RELGFSADV  341 (377)
T ss_dssp             HHHCCCCCC
T ss_pred             HHcCCCCCC
Confidence             49999974

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.2e-33  Score=261.56  Aligned_cols=244  Identities=20%  Similarity=0.272  Sum_probs=193.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++|+||||    ||+||||++|+++|+++|++|++++|..+                      .+..|.+++.++++..+
T Consensus         2 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~v~~~~r~~~----------------------~D~~d~~~~~~~~~~~~   55 (321)
T 1e6u_A            2 AKQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASER   55 (321)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEecCcc----------------------CCccCHHHHHHHHHhcC
Confidence            35799999    99999999999999999999999887531                      11226788888887434


Q ss_pred             ccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC----CCCC----
Q 018900          153 FDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKP----  207 (349)
Q Consensus       153 ~d~Vi~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~----  207 (349)
                      +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+.....+++|+.    +..+    
T Consensus        56 ~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  135 (321)
T 1e6u_A           56 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP  135 (321)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHH
T ss_pred             CCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCc
Confidence            6999999984                 35688999999999999999999999999987667787775    2222    


Q ss_pred             -CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHh----C-CCcccCCCCCcceeeeeHH
Q 018900          208 -DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVR----K-RPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       208 -~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v~  272 (349)
                       ..+|..+|+++++    .+++++++||+++|||+...     .++..++..+..    | .++.+++++++.++|+|++
T Consensus       136 Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~  215 (321)
T 1e6u_A          136 YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVD  215 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHH
Confidence             2456677777765    48999999999999998753     456667776654    3 5677788888999999999


Q ss_pred             HHHHHHHHHhcCCCcc-------CCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCcccc--CCC
Q 018900          273 DLSSMLTLAVENPEAA-------SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKKA--FPF  338 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~-------~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k~--~g~  338 (349)
                      |+|++++.+++++...       .+++||+++++.+++.|+++.+.+.+|.+.++...+.+.     ...+..|+  +||
T Consensus       216 Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~  295 (321)
T 1e6u_A          216 DMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGW  295 (321)
T ss_dssp             HHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTC
T ss_pred             HHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHhcCC
Confidence            9999999999987542       247999999999999999999999999988776655432     22333322  999


Q ss_pred             ccce
Q 018900          339 RNMV  342 (349)
Q Consensus       339 ~p~~  342 (349)
                      +|++
T Consensus       296 ~p~~  299 (321)
T 1e6u_A          296 YHEI  299 (321)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            9975

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-33  Score=260.23  Aligned_cols=235  Identities=14%  Similarity=0.079  Sum_probs=185.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~  146 (349)
                      ..++|+||||    ||+||||++++++|+++|++|++++|.......      .....+ ...+++++.+|   .+++.+
T Consensus        11 ~~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~   80 (335)
T 1rpn_A           11 GSMTRSALVT----GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR------WRLRELGIEGDIQYEDGDMADACSVQR   80 (335)
T ss_dssp             ----CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------HHHHHTTCGGGEEEEECCTTCHHHHHH
T ss_pred             cccCCeEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCCccccc------cchhhccccCceEEEECCCCCHHHHHH
Confidence            4468899999    999999999999999999999999998643210      011111 12356677777   567778


Q ss_pred             hhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-cEEEEeccccccCCCCCCCCCCCCCCCCC-
Q 018900          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPD-  208 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~-  208 (349)
                      ++++.++|+|||+|+.                |+.++.+++++|++.++ ++||++||.++|+.....+++|+.+..+. 
T Consensus        81 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~  160 (335)
T 1rpn_A           81 AVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRS  160 (335)
T ss_dssp             HHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             HHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCC
Confidence            8877668999999983                45678999999999886 89999999999998776788888776553 


Q ss_pred             ---CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCCCc-ccCCCCCcceeeeeHHHHHH
Q 018900          209 ---AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       209 ---~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~  276 (349)
                         .+|..+|.++++    ++++++++||+++|||+....+    +..++..+..+... ..++++++.++|+|++|+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~  240 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHH
Confidence               456777777655    3899999999999999876543    44556666667643 45688889999999999999


Q ss_pred             HHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                      +++.+++++..   ++||+++++.+++.|+++.+.+.+|.+.
T Consensus       241 a~~~~~~~~~~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          241 AMWLMLQQDKA---DDYVVATGVTTTVRDMCQIAFEHVGLDY  279 (335)
T ss_dssp             HHHHHHHSSSC---CCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             HHHHHHhcCCC---CEEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence            99999998652   7999999999999999999999999864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.9e-33  Score=262.44  Aligned_cols=228  Identities=18%  Similarity=0.205  Sum_probs=184.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh----hhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~l~~~~~  149 (349)
                      |+||||    ||+||||++++++|+++ |++|++++|+.+....+.          ...+++++.+|.    +.+.++++
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~   66 (345)
T 2bll_A            1 MRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYHVK   66 (345)
T ss_dssp             CEEEEE----TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------TCTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CeEEEE----CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----------cCCCeEEEeccccCcHHHHHhhcc
Confidence            589999    99999999999999998 899999999875443211          123677888884    24666776


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC--------
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV--------  205 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~--------  205 (349)
                      +  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||.++|+.....+++|+.+.        
T Consensus        67 ~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~  143 (345)
T 2bll_A           67 K--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (345)
T ss_dssp             H--CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             C--CCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccC
Confidence            5  5999999883                3567899999999998 89999999999998766677777643        


Q ss_pred             ---CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCC---------CchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          206 ---KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       206 ---~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                         .+..+|..+|+++.+    .+++++++||+++|||+...         ..+..++..+..+.++.+++++++.++|+
T Consensus       144 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  223 (345)
T 2bll_A          144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  223 (345)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred             cccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEE
Confidence               122457777777643    48999999999999998642         25667788888899888888888899999


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC-ccCHHHHHHHHHHHhCCCce
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~-~~t~~el~~~~~~~~g~~~~  319 (349)
                      |++|+|++++.+++++.. ..+++||+++++ .+|+.|+++.+.+.+|.+..
T Consensus       224 ~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL  275 (345)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred             EHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence            999999999999998742 235899999986 89999999999999987643

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=5.9e-33  Score=263.23  Aligned_cols=250  Identities=18%  Similarity=0.156  Sum_probs=196.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +||+||||    ||+||||++|+++|+++|++|++++|+......           ....+++++.+|   .+++.++++
T Consensus        28 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           28 ENLKISIT----GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------EDMFCDEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-----------GGGTCSEEEECCTTSHHHHHHHHT
T ss_pred             cCCeEEEE----CCccHHHHHHHHHHHHCCCeEEEEECCCccchh-----------hccCCceEEECCCCCHHHHHHHhC
Confidence            57899999    999999999999999999999999998654321           112367777777   566778886


Q ss_pred             CCCccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC-----CCCCCCC--CC
Q 018900          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-----PPHVEGD--VV  205 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~-----~~~~e~~--~~  205 (349)
                      +  +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+....     .++.|++  +.
T Consensus        93 ~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~  170 (379)
T 2c5a_A           93 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  170 (379)
T ss_dssp             T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             C--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCC
Confidence            5  5999999983                 3567899999999999999999999999986432     3455554  22


Q ss_pred             CC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCC-cccCCCCCcceeeeeH
Q 018900          206 KP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHV  271 (349)
Q Consensus       206 ~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v  271 (349)
                      .+    ..+|..+|+++++    .+++++++||+++|||+....     .+..++..+..+.+ +.+++++++.++|+|+
T Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v  250 (379)
T 2c5a_A          171 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI  250 (379)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEH
Confidence            22    2456677776654    489999999999999976532     56778888878876 7788888889999999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc----cCCCcc---ccCCCccce
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA----AGIDAK---KAFPFRNMV  342 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~----~~~~~~---k~~g~~p~~  342 (349)
                      +|+|++++.+++++.   +++||+++++.+++.|+++.+.+.+|.+.++..+|.+.    ...+..   +.+||+|++
T Consensus       251 ~Dva~ai~~~l~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~  325 (379)
T 2c5a_A          251 DECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNM  325 (379)
T ss_dssp             HHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCC
T ss_pred             HHHHHHHHHHhhccC---CCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCCCcccccCCHHHHHHHhCCCCCC
Confidence            999999999998762   47999999999999999999999999988777666432    122333   349999974

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.4e-32  Score=257.07  Aligned_cols=254  Identities=14%  Similarity=0.167  Sum_probs=197.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ||+||||    ||+||||++++++|+++  |++|++++|.......      ....++...+++++.+|   .+++.+++
T Consensus         4 m~~vlVT----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            4 FKNIIVT----GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK------ANLEAILGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG------GGTGGGCSSSEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEe----CCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh------hHHhhhccCCeEEEECCCCCHHHHHHHh
Confidence            5799999    99999999999999998  8999999997532110      01122223467777777   56788888


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC------------CCCC
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE------------PPHV  200 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~------------~~~~  200 (349)
                      ++.  |+|||+|+.                |+.++.+++++|++.++ +|||+||.++||....            .+++
T Consensus        74 ~~~--d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~  150 (348)
T 1oc2_A           74 AKA--DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT  150 (348)
T ss_dssp             TTC--SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred             hcC--CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcC
Confidence            776  999999983                46779999999999888 9999999999986532            5677


Q ss_pred             CCCCCCCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                      |+.+..+.    .+|..+|+++++    .+++++++||+++|||+... .++..++..+..+.++.+++++++.++++|+
T Consensus       151 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  230 (348)
T 1oc2_A          151 AETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT  230 (348)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEH
Confidence            77665443    456777777654    48999999999999998753 3566778888888888888888889999999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-eEEcCCC-----ccCCCccc---cCCCccce
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPK-----AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-~~~~~~~-----~~~~~~~k---~~g~~p~~  342 (349)
                      +|+|++++.+++++.  .|++||+++++.+++.|+++.+.+.+|.+.. +...+..     ....+..|   .+||+|++
T Consensus       231 ~Dva~~~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  308 (348)
T 1oc2_A          231 NDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQF  308 (348)
T ss_dssp             HHHHHHHHHHHHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSC
T ss_pred             HHHHHHHHHHhhCCC--CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCC
Confidence            999999999998653  3589999999999999999999999998643 3332221     11234333   49999975

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=3.3e-32  Score=253.62  Aligned_cols=254  Identities=16%  Similarity=0.265  Sum_probs=196.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC---C---CeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhH
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS---G---HEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEV  144 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~---g---~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l  144 (349)
                      |+||||    ||+||||++++++|+++   |   ++|++++|.......      .....+. ..+++++.+|   .+++
T Consensus         1 M~vlVT----GatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~   70 (337)
T 1r6d_A            1 MRLLVT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR------ANLAPVDADPRLRFVHGDIRDAGLL   70 (337)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG------GGGGGGTTCTTEEEEECCTTCHHHH
T ss_pred             CeEEEE----CCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch------hhhhhcccCCCeEEEEcCCCCHHHH
Confidence            579999    99999999999999997   8   999999996521110      0111111 2356777777   5667


Q ss_pred             HhhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~  208 (349)
                      .+++.+  +|+|||+|+.                |+.++.+++++|++.+++||||+||.++||.....+++|+.+..+.
T Consensus        71 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  148 (337)
T 1r6d_A           71 ARELRG--VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (337)
T ss_dssp             HHHTTT--CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             HHHhcC--CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCC
Confidence            777754  6999999983                4678999999999999999999999999997655678887765543


Q ss_pred             ----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          209 ----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       209 ----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                          .+|..+|+++++    .+++++++||+++|||+... .++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  228 (337)
T 1r6d_A          149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHH
Confidence                456667776654    48999999999999998753 356677888888888888888888999999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-eEEcCCCc-----cCCCccc---cCCCccce
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKA-----AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-~~~~~~~~-----~~~~~~k---~~g~~p~~  342 (349)
                      .+++++.  .|++||+++++.+++.|+++.+.+.+|.+.. +...+...     ...+..|   .+||+|.+
T Consensus       229 ~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  298 (337)
T 1r6d_A          229 LVLAGGR--AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQV  298 (337)
T ss_dssp             HHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCS
T ss_pred             HHHhCCC--CCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCC
Confidence            9998654  3589999999999999999999999998753 33332211     1234333   49999974

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-33  Score=260.09  Aligned_cols=259  Identities=20%  Similarity=0.291  Sum_probs=194.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~~  149 (349)
                      ||+||||    ||+||||++++++|+++|++|++++|.......      .....+.. .+++++.+|   .+++.++++
T Consensus         1 M~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~   70 (347)
T 1orr_A            1 MAKLLIT----GGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT------DNLHWLSSLGNFEFVHGDIRNKNDVTRLIT   70 (347)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH------HHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CcEEEEe----CCCchhHHHHHHHHHhCCCEEEEEeCCCccCch------hhhhhhccCCceEEEEcCCCCHHHHHHHHh
Confidence            5789999    999999999999999999999999985321100      00011111 246777777   567788887


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCc-EEEEeccccccCCCCCCC--------------
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPP--------------  198 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~~--------------  198 (349)
                      +.++|+|||+|+.                |+.++.+++++|++.+++ +|||+||.++|+.....+              
T Consensus        71 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~  150 (347)
T 1orr_A           71 KYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  150 (347)
T ss_dssp             HHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             ccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccc
Confidence            6456999999983                467899999999999885 999999999999754433              


Q ss_pred             --CCCCCCCCC----CCChHHHHHHHHhh----CCcEEEEecCceeeCCCCC----CchHHHHHHHHhCC-----CcccC
Q 018900          199 --HVEGDVVKP----DAGHVQVEKYISEN----FSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKR-----PVPIP  259 (349)
Q Consensus       199 --~~e~~~~~~----~~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~-----~~~~~  259 (349)
                        +.|+.+..+    ..+|..+|++++++    +++++++||+++||++...    ..+..++..+..+.     ++.++
T Consensus       151 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 1orr_A          151 NGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTIS  230 (347)
T ss_dssp             TCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             cCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEe
Confidence              444444333    24577777777654    8999999999999997643    24566677776665     67778


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCC--ccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCc
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR--AVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDA  332 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~--~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~  332 (349)
                      +++++.++|+|++|+|++++.+++++....|++||+++++  .+++.|+++.+.+.+|.+.++...|....     ..+.
T Consensus       231 g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~  310 (347)
T 1orr_A          231 GNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADI  310 (347)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCC
T ss_pred             cCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCH
Confidence            8899999999999999999999986333345899999986  49999999999999999877776654322     2333


Q ss_pred             cc---cCCCccce
Q 018900          333 KK---AFPFRNMV  342 (349)
Q Consensus       333 ~k---~~g~~p~~  342 (349)
                      .|   .+||+|++
T Consensus       311 ~k~~~~lG~~p~~  323 (347)
T 1orr_A          311 KKITNAIDWSPKV  323 (347)
T ss_dssp             HHHHHHHCCCCCS
T ss_pred             HHHHHHHCCCccC
Confidence            33   49999964

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.2e-32  Score=256.75  Aligned_cols=226  Identities=14%  Similarity=0.178  Sum_probs=181.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+||||++++++|+++|++|++++|+......           +...+++++.+|   .+++.++++
T Consensus        12 ~~M~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------l~~~~~~~~~~Dl~d~~~~~~~~~   76 (342)
T 2x4g_A           12 AHVKYAVL----GATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-----------LAYLEPECRVAEMLDHAGLERALR   76 (342)
T ss_dssp             CCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-----------GGGGCCEEEECCTTCHHHHHHHTT
T ss_pred             cCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-----------hccCCeEEEEecCCCHHHHHHHHc
Confidence            45699999    999999999999999999999999998754321           222367777777   567778887


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC--CCCCCCCCCCC----C-
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE--PPHVEGDVVKP----D-  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~--~~~~e~~~~~~----~-  208 (349)
                      +  +|+|||+|+.              |+.++.+++++|++.+++||||+||.++|+....  .+ +|+.+..+    . 
T Consensus        77 ~--~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~  153 (342)
T 2x4g_A           77 G--LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKS  153 (342)
T ss_dssp             T--CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSC
T ss_pred             C--CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccC
Confidence            6  5999999983              4678999999999999999999999999987554  34 77776554    2 


Q ss_pred             ---CChHHHHHHHHhh---CCcEEEEecCceeeCCC-CCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHH
Q 018900          209 ---AGHVQVEKYISEN---FSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA  281 (349)
Q Consensus       209 ---~~k~~~ek~~~~~---~~~~~ilR~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  281 (349)
                         .+|+.+|++++++   +++++++||+++||++. ... +..++..+..+.+..+   +++.++++|++|+|++++.+
T Consensus       154 ~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~  229 (342)
T 2x4g_A          154 SYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMA  229 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHH
Confidence               3467777777653   89999999999999987 423 5567777777776654   55778999999999999999


Q ss_pred             hcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcC
Q 018900          282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD  324 (349)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~  324 (349)
                      ++++..  +++||+++++ +++.|+++.+.+.+|.+..+ .+|
T Consensus       230 ~~~~~~--g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p  268 (342)
T 2x4g_A          230 LERGRI--GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMS  268 (342)
T ss_dssp             HHHSCT--TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EEC
T ss_pred             HhCCCC--CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCC
Confidence            988765  5899999999 99999999999999988765 444

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=2.1e-32  Score=261.04  Aligned_cols=265  Identities=17%  Similarity=0.178  Sum_probs=196.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-------CCCCC-----CCcccceecCCCeEEEcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-------MKKPP-----FNRFNEIVSAGGKTVWGD  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-------~~~~~-----~~~~~~l~~~~~~~~~~D  140 (349)
                      .+++||||    ||+||||++|+++|+++|++|++++|......+       +....     ...+..+...+++++.+|
T Consensus        10 ~~~~vlVT----G~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A           10 HGSRVMVI----GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             --CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCCeEEEe----CCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            47899999    999999999999999999999999985321100       00000     000001123467788887


Q ss_pred             ---hhhHHhhhcCCCccEEEeCCCC-------------------ChhhHHHHHHHHHhCCC-cEEEEeccccccCCCCCC
Q 018900          141 ---PAEVGNVVGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEP  197 (349)
Q Consensus       141 ---~~~l~~~~~~~~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~  197 (349)
                         .+++.+++.+.++|+|||+|+.                   |+.++.+++++|++.++ ++||++||.++||... .
T Consensus        86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~  164 (404)
T 1i24_A           86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-I  164 (404)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-S
T ss_pred             CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-C
Confidence               5667777877557999999983                   45678999999999887 5999999999999765 3


Q ss_pred             CCCCC--------------CCCCC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCC----------------
Q 018900          198 PHVEG--------------DVVKP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN----------------  239 (349)
Q Consensus       198 ~~~e~--------------~~~~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~----------------  239 (349)
                      ++.|+              .+..+    ..+|..+|.++.+    ++++++++||+++|||+..                
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~  244 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  244 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence            56664              12222    2456666776554    3899999999999999864                


Q ss_pred             --CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccC-CCEEEeeCCCccCHHHHHHHHHHH---
Q 018900          240 --KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS-SNIFNLVSDRAVTLDGMAKLCAQA---  313 (349)
Q Consensus       240 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~-~~~~~i~~~~~~t~~el~~~~~~~---  313 (349)
                        ...+..++..+..+.++.+++++++.++|+|++|+|++++.+++++...+ .++||+++ +.+++.|+++.+++.   
T Consensus       245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~  323 (404)
T 1i24_A          245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSK  323 (404)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHT
T ss_pred             chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHh
Confidence              24577888888899988888989899999999999999999998865322 16999998 789999999999998   


Q ss_pred             hCCCceeEEcCCCc-------cCCCcc--ccCCCcccee
Q 018900          314 AGLPVEIVHYDPKA-------AGIDAK--KAFPFRNMVF  343 (349)
Q Consensus       314 ~g~~~~~~~~~~~~-------~~~~~~--k~~g~~p~~~  343 (349)
                      +|.++++...|...       ...+..  +.+||+|++.
T Consensus       324 ~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~  362 (404)
T 1i24_A          324 LGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYL  362 (404)
T ss_dssp             TTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCC
T ss_pred             hCCCccccccCcccCccccceEecCHHHHHHcCCCcCcC
Confidence            88887766665432       112322  3599999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.1e-32  Score=257.00  Aligned_cols=259  Identities=16%  Similarity=0.125  Sum_probs=195.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+||||++|+++|+++|++|++++|+.+....+...    +.  ...+++++.+|   .+++.++++
T Consensus         8 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~Dl~d~~~~~~~~~   77 (357)
T 1rkx_A            8 QGKRVFVT----GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET----AR--VADGMQSEIGDIRDQNKLLESIR   77 (357)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH----TT--TTTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHh----hc--cCCceEEEEccccCHHHHHHHHH
Confidence            46799999    9999999999999999999999999987543321100    00  12367777777   567777777


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCCC-CCCCCCCCCCCC---
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADE-PPHVEGDVVKPD---  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~-~~~~e~~~~~~~---  208 (349)
                      +.++|+|||+|+.                |+.++.+++++|++.+ +++|||+||..+||.... .++.|+.+..+.   
T Consensus        78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y  157 (357)
T 1rkx_A           78 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPY  157 (357)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHH
T ss_pred             hcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCcc
Confidence            6567999999983                5678899999999887 899999999999997653 366776554432   


Q ss_pred             -CChHHHHHHHHhh-------------CCcEEEEecCceeeCCCCC--CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          209 -AGHVQVEKYISEN-------------FSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       209 -~~k~~~ek~~~~~-------------~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                       .+|..+|++++.+             +++++++||+++|||+...  .++..++..+..+.++.+. ++++.++|+|++
T Consensus       158 ~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~  236 (357)
T 1rkx_A          158 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVL  236 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHH
Confidence             4577777776543             8999999999999998642  4677788888888887665 467788999999


Q ss_pred             HHHHHHHHHhcC---CCccCCCEEEeeCC--CccCHHHHHHHHHHHhCCCceeEEcCC------CccCCCccc---cCCC
Q 018900          273 DLSSMLTLAVEN---PEAASSNIFNLVSD--RAVTLDGMAKLCAQAAGLPVEIVHYDP------KAAGIDAKK---AFPF  338 (349)
Q Consensus       273 Dva~~~~~~~~~---~~~~~~~~~~i~~~--~~~t~~el~~~~~~~~g~~~~~~~~~~------~~~~~~~~k---~~g~  338 (349)
                      |+|++++.++++   .....+++||++++  +.+++.|+++.+.+.+|.+.++...+.      .....+..|   .+||
T Consensus       237 Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  316 (357)
T 1rkx_A          237 EPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGW  316 (357)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCC
Confidence            999999999875   21122489999974  689999999999999998766543321      112233333   4999


Q ss_pred             ccce
Q 018900          339 RNMV  342 (349)
Q Consensus       339 ~p~~  342 (349)
                      +|++
T Consensus       317 ~p~~  320 (357)
T 1rkx_A          317 HPRW  320 (357)
T ss_dssp             CCCC
T ss_pred             CcCC
Confidence            9975

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=5.9e-32  Score=251.66  Aligned_cols=253  Identities=19%  Similarity=0.186  Sum_probs=193.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCC--CcccCCCCCCCccccee-cCCCeEEEcC---hhhHH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDE--NSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~--~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~  145 (349)
                      +|+||||    ||+||||++++++|+++|  ++|++++|...  ....+.        ++. ..+++++.+|   .+.+.
T Consensus         3 ~m~vlVT----GatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d~~~~~   70 (336)
T 2hun_A            3 SMKLLVT----GGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLK--------DLEDDPRYTFVKGDVADYELVK   70 (336)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGT--------TTTTCTTEEEEECCTTCHHHHH
T ss_pred             CCeEEEE----CCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHh--------hhccCCceEEEEcCCCCHHHHH
Confidence            4689999    999999999999999996  89999999652  111111        111 2356777777   56677


Q ss_pred             hhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-cEEEEeccccccCCCCCCCCCCCCCCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~  208 (349)
                      +++.+  +|+|||+|+.                |+.++.+++++|++.+. ++|||+||.++||.....+++|+.+..+.
T Consensus        71 ~~~~~--~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~  148 (336)
T 2hun_A           71 ELVRK--VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPS  148 (336)
T ss_dssp             HHHHT--CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC
T ss_pred             HHhhC--CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC
Confidence            77754  6999999984                46789999999998875 79999999999998766678887765442


Q ss_pred             ----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          209 ----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       209 ----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                          .+|..+|+++++    ++++++++||+++|||+... .++..++..+..+.++.+++++++.++++|++|+|++++
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  228 (336)
T 2hun_A          149 SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIE  228 (336)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHH
Confidence                456677776654    48999999999999998753 356677888888888888888888999999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-eEEcCCC-----ccCCCccc---cCCCccce
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPK-----AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-~~~~~~~-----~~~~~~~k---~~g~~p~~  342 (349)
                      .+++++.  .|++||+++++.+++.|+++.+++.+|.+.. +...+..     ....+..|   .+||+|.+
T Consensus       229 ~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  298 (336)
T 2hun_A          229 LVLLKGE--SREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKY  298 (336)
T ss_dssp             HHHHHCC--TTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSS
T ss_pred             HHHhCCC--CCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCC
Confidence            9998654  3589999999999999999999999998643 3333221     12234433   39999974

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-32  Score=249.70  Aligned_cols=235  Identities=16%  Similarity=0.175  Sum_probs=191.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..++||||    ||+||||++++++|+++|++|++++|..-                       +..|.+++.+++++.+
T Consensus        11 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~-----------------------Dl~d~~~~~~~~~~~~   63 (292)
T 1vl0_A           11 HHMKILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDL-----------------------DITNVLAVNKFFNEKK   63 (292)
T ss_dssp             -CEEEEEE----STTSHHHHHHHHHHTTSSEEEEEECTTTC-----------------------CTTCHHHHHHHHHHHC
T ss_pred             ccceEEEE----CCCChHHHHHHHHHHhCCCeEEeccCccC-----------------------CCCCHHHHHHHHHhcC
Confidence            46899999    99999999999999999999999999631                       1126788888887445


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChH
Q 018900          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       153 ~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~  212 (349)
                      +|+|||+|+.                |+.++.+++++|++.++ ||||+||.++|+.....+++|+.+..+.    .+|.
T Consensus        64 ~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~  142 (292)
T 1vl0_A           64 PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKL  142 (292)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHH
T ss_pred             CCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHH
Confidence            7999999984                45678999999999898 9999999999998766788888766543    4577


Q ss_pred             HHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCE
Q 018900          213 QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (349)
Q Consensus       213 ~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  292 (349)
                      .+|+++++++.+++++||+++||+  ...++..++..+..+.++.+++  ++.++++|++|+|++++.+++++   .+++
T Consensus       143 ~~E~~~~~~~~~~~~lR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~---~~~~  215 (292)
T 1vl0_A          143 EGENFVKALNPKYYIVRTAWLYGD--GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK---NYGT  215 (292)
T ss_dssp             HHHHHHHHHCSSEEEEEECSEESS--SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT---CCEE
T ss_pred             HHHHHHHhhCCCeEEEeeeeeeCC--CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC---CCcE
Confidence            788888888889999999999999  3456667777777787776665  46789999999999999999886   2589


Q ss_pred             EEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc----------cCCCccc---cCCCccce
Q 018900          293 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA----------AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       293 ~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~----------~~~~~~k---~~g~~p~~  342 (349)
                      ||+++++.+++.|+++.+.+.+|.+.++..++...          ...+..|   .+||+|+.
T Consensus       216 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  278 (292)
T 1vl0_A          216 FHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITRE  278 (292)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCB
T ss_pred             EEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCCC
Confidence            99999999999999999999999987776654321          1233333   49999973

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.4e-32  Score=254.10  Aligned_cols=251  Identities=16%  Similarity=0.165  Sum_probs=193.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+||||++++++|+++|++|++++|......+..       .++  .+++++.+|   .+++.+++
T Consensus        18 ~~~~~vlVT----GasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~l--~~v~~~~~Dl~d~~~~~~~~   84 (330)
T 2pzm_A           18 GSHMRILIT----GGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-------PPV--AGLSVIEGSVTDAGLLERAF   84 (330)
T ss_dssp             TTCCEEEEE----TTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-------CSC--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-------hcc--CCceEEEeeCCCHHHHHHHH
Confidence            346799999    99999999999999999999999999754332111       111  356677777   56677788


Q ss_pred             cCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCC--CCCCCC-C-CCCCCCh
Q 018900          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGD-V-VKPDAGH  211 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~--~~~e~~-~-~~~~~~k  211 (349)
                      +..++|+|||+|+.             |+.++.+++++|++.++++||++||.++|+.....  +++|+. + ..+..+|
T Consensus        85 ~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK  164 (330)
T 2pzm_A           85 DSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISK  164 (330)
T ss_dssp             HHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHH
T ss_pred             hhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHH
Confidence            73346999999984             46779999999999999999999999999876544  777775 1 1123567


Q ss_pred             HHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH-HHHHHhcCCCccCC
Q 018900          212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS-MLTLAVENPEAASS  290 (349)
Q Consensus       212 ~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-~~~~~~~~~~~~~~  290 (349)
                      ..+|.+++.++++++++||+++|||+....++..++..+..+.  .+++++. .++++|++|+|+ +++.+++++.   +
T Consensus       165 ~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~---g  238 (330)
T 2pzm_A          165 TAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP---T  238 (330)
T ss_dssp             HHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC---C
T ss_pred             HHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC---C
Confidence            7788888888999999999999999975456667777776665  5566666 789999999999 9999998854   5


Q ss_pred             CEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCC----CccCCCcc-------ccCCCccce
Q 018900          291 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP----KAAGIDAK-------KAFPFRNMV  342 (349)
Q Consensus       291 ~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~----~~~~~~~~-------k~~g~~p~~  342 (349)
                      ++||+++++.+++.|+++.+.+.+|.+ .+...|.    .....+..       +.+||+|++
T Consensus       239 ~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~d~~k~~~~~l~~lG~~p~~  300 (330)
T 2pzm_A          239 GVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAKV  300 (330)
T ss_dssp             EEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEECCCTTSCSEECBCCHHHHHHHCCCCCC
T ss_pred             CEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCcchhhccCCHHHHhhchHHHcCCcccC
Confidence            899999999999999999999999987 4333322    11222222       339999965

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=3.4e-32  Score=255.73  Aligned_cols=235  Identities=15%  Similarity=0.223  Sum_probs=186.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++|+||||    ||+||||++|+++|+++| ++|++++|...... ..     .+..+   .+..+..|.+.++.++++.
T Consensus        45 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-----~~~~~---~~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           45 EGRMIIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-----NLVDL---NIADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             ---CEEEE----TTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-----GTTTS---CCSEEEEHHHHHHHHHTTC
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-----cccCc---eEeeecCcHHHHHHHHhhc
Confidence            45789999    999999999999999999 99999999764321 00     00111   1344455677788887642


Q ss_pred             ---CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CC
Q 018900          152 ---TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AG  210 (349)
Q Consensus       152 ---~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~  210 (349)
                         ++|+|||+|+.              |+.++.+++++|++.++ +|||+||.++|+.....+++|+.+..+.    .+
T Consensus       112 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~s  190 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYS  190 (357)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHH
T ss_pred             ccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHH
Confidence               47999999983              56789999999999999 9999999999998776688887765543    45


Q ss_pred             hHHHHHHHHhh----CCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCc-ceeeeeHHHHHHHHHH
Q 018900          211 HVQVEKYISEN----FSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTL  280 (349)
Q Consensus       211 k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~~~~  280 (349)
                      |..+|+++.++    +++++++||+++|||+...     ..+..++..+..+.++.+++++++ .++|+|++|+|++++.
T Consensus       191 K~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~  270 (357)
T 2x6t_A          191 KFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLW  270 (357)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHH
Confidence            67777776553    7899999999999998652     466777888888888888888888 8999999999999999


Q ss_pred             HhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC-ceeEEcC
Q 018900          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYD  324 (349)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~-~~~~~~~  324 (349)
                      +++++.   +++||+++++.+++.|+++.+.+.+|.+ +++...+
T Consensus       271 ~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~  312 (357)
T 2x6t_A          271 FLENGV---SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFP  312 (357)
T ss_dssp             HHHHCC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCC
T ss_pred             HHhcCC---CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCC
Confidence            998766   4899999999999999999999999987 5544443

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-32  Score=252.60  Aligned_cols=231  Identities=16%  Similarity=0.227  Sum_probs=166.5

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC---
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV---  151 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~---  151 (349)
                      +||||    ||+||||++++++|+++| ++|++++|......         ...+....+..+..|.+.+..++++.   
T Consensus         1 ~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   67 (310)
T 1eq2_A            1 MIIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------FVNLVDLNIADYMDKEDFLIQIMAGEEFG   67 (310)
T ss_dssp             CEEEE----TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---------GHHHHTSCCSEEEEHHHHHHHHHTTCCCS
T ss_pred             CEEEE----cCccHHHHHHHHHHHHCCCcEEEEEccCCCCch---------hhhcCcceeccccccHHHHHHHHhccccC
Confidence            59999    999999999999999999 99999999764321         00111011334445677788888752   


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHH
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQ  213 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~  213 (349)
                      ++|+|||+|+.              |+.++.+++++|++.++ +||++||.++|+.....+++|+.+..+.    .+|..
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~  146 (310)
T 1eq2_A           68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFL  146 (310)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHH
T ss_pred             CCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence            47999999983              56789999999999999 9999999999998776678887765543    45677


Q ss_pred             HHHHHHhh----CCcEEEEecCceeeCCCC-----CCchHHHHHHHHhCCCcccCCCCCc-ceeeeeHHHHHHHHHHHhc
Q 018900          214 VEKYISEN----FSNWASFRPQYMIGSGNN-----KDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       214 ~ek~~~~~----~~~~~ilR~~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~~~~~~~  283 (349)
                      +|++++++    +++++++||+++|||+..     ..++..++..+..+.++.+++++++ .++++|++|+|++++.+++
T Consensus       147 ~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~  226 (310)
T 1eq2_A          147 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE  226 (310)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHh
Confidence            77777654    799999999999999865     2467778888888888888888888 8999999999999999998


Q ss_pred             CCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC-ceeEEc
Q 018900          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHY  323 (349)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~-~~~~~~  323 (349)
                      ++.   +++||+++++.+|+.|+++.+.+.+|.+ +++...
T Consensus       227 ~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  264 (310)
T 1eq2_A          227 NGV---SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPF  264 (310)
T ss_dssp             HCC---CEEEEESCSCCBCHHHHHHHC--------------
T ss_pred             cCC---CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCC
Confidence            765   4899999999999999999999999987 444333

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.3e-32  Score=251.70  Aligned_cols=251  Identities=16%  Similarity=0.154  Sum_probs=189.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      |+|+||||    ||+||||++++++|+++  |++|++++|+.....            + ..+++++.+|   .+++.++
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~-~~~~~~~~~D~~d~~~~~~~   63 (312)
T 2yy7_A            1 MNPKILII----GACGQIGTELTQKLRKLYGTENVIASDIRKLNTD------------V-VNSGPFEVVNALDFNQIEHL   63 (312)
T ss_dssp             CCCCEEEE----TTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH------------H-HHSSCEEECCTTCHHHHHHH
T ss_pred             CCceEEEE----CCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc------------c-cCCCceEEecCCCHHHHHHH
Confidence            46789999    99999999999999999  899999999764321            0 1246677776   5677888


Q ss_pred             hcCCCccEEEeCCCC---------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC-CCCCCCCCCCCC---
Q 018900          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEGDVVKPD---  208 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~-~~~~e~~~~~~~---  208 (349)
                      ++..++|+|||+|+.               |+.++.+++++|++.++++|||+||.++|+.... .+..|+.+..+.   
T Consensus        64 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y  143 (312)
T 2yy7_A           64 VEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVY  143 (312)
T ss_dssp             HHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHH
T ss_pred             HhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchh
Confidence            875457999999984               4578899999999999999999999999987542 456666654442   


Q ss_pred             -CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          209 -AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       209 -~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                       .+|..+|+++++    ++++++++||+++||++..+     ..+..++.....++++.+++++++.++|+|++|+|+++
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          144 GISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence             456677776654    38999999999999976422     12333344455566677788888899999999999999


Q ss_pred             HHHhcCCCcc--CCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC--------ccCCCccc---cCCCccce
Q 018900          279 TLAVENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK--------AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       279 ~~~~~~~~~~--~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~--------~~~~~~~k---~~g~~p~~  342 (349)
                      +.+++++...  ++++||+++ +.+|+.|+++.+.+.+| +.++...+..        ....+..|   .+||+|++
T Consensus       224 ~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~-~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  298 (312)
T 2yy7_A          224 INIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIP-EFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTF  298 (312)
T ss_dssp             HHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCT-TCEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCC
T ss_pred             HHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCC-CCceEeccCccccccccccccCCHHHHHHHcCCCCCC
Confidence            9999987642  247999996 78999999999999998 3344333321        11223333   49999985

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-31  Score=253.85  Aligned_cols=234  Identities=16%  Similarity=0.136  Sum_probs=184.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-------ecCCCeEEEcC---hh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-------VSAGGKTVWGD---PA  142 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~D---~~  142 (349)
                      |+|+||||    ||+||||++++++|+++|++|++++|+.+....      .....+       ...+++++.+|   .+
T Consensus        23 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~   92 (375)
T 1t2a_A           23 MRNVALIT----GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT------GRIEHLYKNPQAHIEGNMKLHYGDLTDST   92 (375)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------TTTGGGC---------CEEEEECCTTCHH
T ss_pred             cCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCccccch------hhHHHHhhhhccccCCCceEEEccCCCHH
Confidence            45899999    999999999999999999999999998643210      011111       22456777777   56


Q ss_pred             hHHhhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC---cEEEEeccccccCCCCCCCCCCCC
Q 018900          143 EVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv---~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      ++.+++++.++|+|||+|+.                |+.++.+++++|++.++   ++||++||.++|+.....+++|+.
T Consensus        93 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A           93 CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccC
Confidence            77778876668999999983                45678999999999987   899999999999987667888887


Q ss_pred             CCCCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCch----HHHHHHHHhCCC-cccCCCCCcceeeee
Q 018900          204 VVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRP-VPIPGSGMQFTNIAH  270 (349)
Q Consensus       204 ~~~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~i~  270 (349)
                      +..+.    .+|..+|.++++    ++++++++|++++|||+....+.    ..++..+..+.. ...++++++.++|+|
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  252 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  252 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence            65543    456666766654    38999999999999998665433    345556666654 345688889999999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      ++|+|++++.+++++..   ++||+++++.+++.|+++.+++.+|.+++
T Consensus       253 v~Dva~a~~~~~~~~~~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  298 (375)
T 1t2a_A          253 AKDYVEAMWLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIV  298 (375)
T ss_dssp             HHHHHHHHHHHHHSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHHHhcCCC---ceEEEeCCCcccHHHHHHHHHHHhCCCcc
Confidence            99999999999987652   78999999999999999999999998754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=6.1e-32  Score=257.35  Aligned_cols=265  Identities=19%  Similarity=0.239  Sum_probs=193.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHH-hCCCeEEEEEcCCCCcccCCCCC-CCcc----ccee----cCC---CeEEEcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPP-FNRF----NEIV----SAG---GKTVWGD  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll-~~g~~V~~l~R~~~~~~~~~~~~-~~~~----~~l~----~~~---~~~~~~D  140 (349)
                      +|+||||    ||+||||++++++|+ ++|++|++++|............ ...+    .++.    ..+   ++++.+|
T Consensus         2 ~m~vlVT----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (397)
T 1gy8_A            2 HMRVLVC----GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (397)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECC
Confidence            3689999    999999999999999 99999999999764320000000 0000    0010    113   6777777


Q ss_pred             ---hhhHHhhhcCCC-ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCC-----
Q 018900          141 ---PAEVGNVVGGVT-FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-----  195 (349)
Q Consensus       141 ---~~~l~~~~~~~~-~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~-----  195 (349)
                         .+.+.++++..+ +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+...     
T Consensus        78 l~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~  157 (397)
T 1gy8_A           78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (397)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             CCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccc
Confidence               567777787444 7999999983                467899999999999999999999999998765     


Q ss_pred             --CCCCCCCCCCCCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCC----------CCchHHHH----HHHH
Q 018900          196 --EPPHVEGDVVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNN----------KDCEEWFF----DRIV  251 (349)
Q Consensus       196 --~~~~~e~~~~~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~----------~~~~~~~~----~~~~  251 (349)
                        ..+++|+.+..+.    .+|..+|+++..    ++++++++||+++|||+..          ..++..++    ..+.
T Consensus       158 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  237 (397)
T 1gy8_A          158 TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA  237 (397)
T ss_dssp             -CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred             ccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHH
Confidence              5678888765442    456777776655    3899999999999999642          22444443    2444


Q ss_pred             hCC------------CcccCC------CCCcceeeeeHHHHHHHHHHHhcCCCccC----C---CEEEeeCCCccCHHHH
Q 018900          252 RKR------------PVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPEAAS----S---NIFNLVSDRAVTLDGM  306 (349)
Q Consensus       252 ~~~------------~~~~~~------~~~~~~~~i~v~Dva~~~~~~~~~~~~~~----~---~~~~i~~~~~~t~~el  306 (349)
                      .+.            ++.++|      ++++.++|||++|+|++++.+++++...+    +   ++||+++++.+++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  317 (397)
T 1gy8_A          238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREV  317 (397)
T ss_dssp             CC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHH
T ss_pred             hcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHH
Confidence            443            466666      67888999999999999999998653322    3   7999999999999999


Q ss_pred             HHHHHHHhCCCceeEEcCCCc-----cCCCccc---cCCCccce
Q 018900          307 AKLCAQAAGLPVEIVHYDPKA-----AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       307 ~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k---~~g~~p~~  342 (349)
                      ++.+.+.+|.++++...+...     ...+..|   .|||+|++
T Consensus       318 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  361 (397)
T 1gy8_A          318 IEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKY  361 (397)
T ss_dssp             HHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSC
T ss_pred             HHHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCc
Confidence            999999999987776654322     2334333   49999984

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=1.1e-31  Score=250.82  Aligned_cols=252  Identities=21%  Similarity=0.233  Sum_probs=194.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcChhhHHhhhcC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .++|+||||    ||+||||++|+++|+++|++|++++|.......       ....+ ...+++++.+|..+  ..+.+
T Consensus        25 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~D~~~--~~~~~   91 (343)
T 2b69_A           25 KDRKRILIT----GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR-------NVEHWIGHENFELINHDVVE--PLYIE   91 (343)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GTGGGTTCTTEEEEECCTTS--CCCCC
T ss_pred             cCCCEEEEE----cCccHHHHHHHHHHHHCCCEEEEEeCCCccchh-------hhhhhccCCceEEEeCccCC--hhhcC
Confidence            357899999    999999999999999999999999997533211       01111 12356778887532  23433


Q ss_pred             CCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC-----CCCC--
Q 018900          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKP--  207 (349)
Q Consensus       151 ~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~-----~~~~--  207 (349)
                        +|+|||+|+.                |+.++.+++++|++.++ +|||+||.++|+.....+++|+.     +..+  
T Consensus        92 --~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~  168 (343)
T 2b69_A           92 --VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA  168 (343)
T ss_dssp             --CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTH
T ss_pred             --CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCC
Confidence              6999999983                45679999999999887 99999999999987666777763     2222  


Q ss_pred             --CCChHHHHHHHHh----hCCcEEEEecCceeeCCCC---CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          208 --DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       208 --~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                        ..+|..+|+++.+    .+++++++||+++|||+..   ..++..++..+..++++.+++++++.++|+|++|+|+++
T Consensus       169 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  248 (343)
T 2b69_A          169 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL  248 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence              2457777777643    4899999999999999764   236677888888899888888888999999999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc---cCCCccce
Q 018900          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK---AFPFRNMV  342 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k---~~g~~p~~  342 (349)
                      +.+++.+.   +++||+++++.+++.|+++.+.+.+|.+.++...|...     ...+..|   .|||+|..
T Consensus       249 ~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~  317 (343)
T 2b69_A          249 VALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVV  317 (343)
T ss_dssp             HHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCS
T ss_pred             HHHHhcCC---CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCC
Confidence            99998653   37999999999999999999999999987776665432     2233333   49999964

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.3e-32  Score=252.02  Aligned_cols=240  Identities=16%  Similarity=0.240  Sum_probs=191.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |+||||    ||+||||++++++|+ +|++|++++|+..                   .+..+..|.+++.+++++.++|
T Consensus         1 m~ilVt----GatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~~~d   56 (299)
T 1n2s_A            1 MNILLF----GKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPD   56 (299)
T ss_dssp             CEEEEE----CTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEE----CCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhcCCC
Confidence            489999    999999999999999 8999999999762                   1122233678888888765579


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||+|+.                |+.++.+++++|++.++ ||||+||.++|+.....++.|+.+..+.    .+|..+
T Consensus        57 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~  135 (299)
T 1n2s_A           57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAG  135 (299)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHH
T ss_pred             EEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            99999983                46779999999999997 8999999999998777788888776553    457778


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCC-cc-CCCE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AA-SSNI  292 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~-~~~~  292 (349)
                      |++++++..+++++||+++||++.. .++..++..+..+.++.++++  +.++++|++|+|++++.+++++. .. .+++
T Consensus       136 E~~~~~~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~  212 (299)
T 1n2s_A          136 EKALQDNCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKPEVAGL  212 (299)
T ss_dssp             HHHHHHHCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCEE
T ss_pred             HHHHHHhCCCeEEEeeeeecCCCcC-cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhccccccCce
Confidence            8888888889999999999999765 466677778888887777664  67899999999999999998763 11 2489


Q ss_pred             EEeeCCCccCHHHHHHHHHHHhCCC------ceeEEcCCC----------ccCCCccc---cCCCccce
Q 018900          293 FNLVSDRAVTLDGMAKLCAQAAGLP------VEIVHYDPK----------AAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       293 ~~i~~~~~~t~~el~~~~~~~~g~~------~~~~~~~~~----------~~~~~~~k---~~g~~p~~  342 (349)
                      ||+++++.+|+.|+++.+.+.+|.+      +.+...+..          ....+..|   .+||+|+.
T Consensus       213 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  281 (299)
T 1n2s_A          213 YHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQ  281 (299)
T ss_dssp             EECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCB
T ss_pred             EEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCCC
Confidence            9999999999999999999999876      345444321          11233333   38999974

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=5.2e-32  Score=252.21  Aligned_cols=225  Identities=20%  Similarity=0.245  Sum_probs=180.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .+||+||||    ||+||||++++++|+++|++|++++|......+.       +.++  .+++++.+|   .+++.+++
T Consensus        19 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------l~~~--~~~~~~~~Dl~d~~~~~~~~   85 (333)
T 2q1w_A           19 SHMKKVFIT----GICGQIGSHIAELLLERGDKVVGIDNFATGRREH-------LKDH--PNLTFVEGSIADHALVNQLI   85 (333)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-------SCCC--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEECCCccchhh-------Hhhc--CCceEEEEeCCCHHHHHHHH
Confidence            357899999    9999999999999999999999999976432110       1111  356777777   56677788


Q ss_pred             cCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCCCcEEEEeccccccC----CCCCCCCCCCC-CC--CCC
Q 018900          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYK----PADEPPHVEGD-VV--KPD  208 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~----~~~~~~~~e~~-~~--~~~  208 (349)
                      ++.++|+|||+|+.             |+.++.+++++|++.++++||++||.++|+    .... +++|+. +.  .+.
T Consensus        86 ~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~~p~~~~Y~  164 (333)
T 2q1w_A           86 GDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPRNPANSSYA  164 (333)
T ss_dssp             HHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCCCCTTCHHH
T ss_pred             hccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCCCCCCCchH
Confidence            76447999999984             457799999999999999999999999998    5544 777765 11  123


Q ss_pred             CChHHHHHHHHh-hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 018900          209 AGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       209 ~~k~~~ek~~~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      .+|..+|++++. .. +++++||+++|||+....++..++..+..+.  .+++ +++.++++|++|+|++++.+++++. 
T Consensus       165 ~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-  239 (333)
T 2q1w_A          165 ISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG-  239 (333)
T ss_dssp             HHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC-
T ss_pred             HHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC-
Confidence            467778888887 66 9999999999999854456777777777766  4555 6677899999999999999998866 


Q ss_pred             cCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       288 ~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                        +++||+++++.+++.|+++.+.+.+|.+
T Consensus       240 --g~~~~v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          240 --HGAYHFSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             --CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             --CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence              4899999999999999999999999987

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.9e-31  Score=248.51  Aligned_cols=260  Identities=22%  Similarity=0.289  Sum_probs=189.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+||||++++++|+++|++|++++|......+.    ...+..+...+++++.+|   .+++.+++++.
T Consensus         1 m~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (338)
T 1udb_A            1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV----LPVIERLGGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH----HHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhH----HHHHHhhcCCcceEEEccCCCHHHHHHHhhcc
Confidence            479999    9999999999999999999999998754321100    000111112346677777   56677777655


Q ss_pred             CccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC-----CCC
Q 018900          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP-----DAG  210 (349)
Q Consensus       152 ~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~-----~~~  210 (349)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....++.|+.+..+     ..+
T Consensus        73 ~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~s  152 (338)
T 1udb_A           73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHH
Confidence            68999999983                467889999999999999999999999999876667788766533     245


Q ss_pred             hHHHHHHHHh----h-CCcEEEEecCceeeCCCC-----------CCchHHHHHHHH-hCCCcccCC------CCCccee
Q 018900          211 HVQVEKYISE----N-FSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIV-RKRPVPIPG------SGMQFTN  267 (349)
Q Consensus       211 k~~~ek~~~~----~-~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~  267 (349)
                      |..+|+++++    . +++++++||+++||+...           ..++..++.... .+.++.+++      ++++.++
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  232 (338)
T 1udb_A          153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeee
Confidence            6667776654    2 689999999999998421           123444444433 234444444      5677899


Q ss_pred             eeeHHHHHHHHHHHhcCCC-ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc---cCCC
Q 018900          268 IAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK---AFPF  338 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~-~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k---~~g~  338 (349)
                      |||++|+|++++.+++++. ..++++||+++++.+++.|+++.+++.+|.++++...+...     ...+..|   .+||
T Consensus       233 ~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  312 (338)
T 1udb_A          233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNW  312 (338)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCC
T ss_pred             eEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCchhhhhcCHHHHHHHcCC
Confidence            9999999999999997642 22237999999999999999999999999887766554332     2234333   4999


Q ss_pred             ccce
Q 018900          339 RNMV  342 (349)
Q Consensus       339 ~p~~  342 (349)
                      +|++
T Consensus       313 ~p~~  316 (338)
T 1udb_A          313 RVTR  316 (338)
T ss_dssp             CCCC
T ss_pred             CcCC
Confidence            9974

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.98  E-value=1e-31  Score=247.88  Aligned_cols=228  Identities=20%  Similarity=0.251  Sum_probs=171.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      |+|+||||    ||+||||++++++|+++|++|++++|+.+..         .       -+..+..|.+++.+++++.+
T Consensus         1 m~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~-------~~~~Dl~d~~~~~~~~~~~~   60 (315)
T 2ydy_A            1 MNRRVLVT----GATGLLGRAVHKEFQQNNWHAVGCGFRRARP---------K-------FEQVNLLDSNAVHHIIHDFQ   60 (315)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHC
T ss_pred             CCCeEEEE----CCCcHHHHHHHHHHHhCCCeEEEEccCCCCC---------C-------eEEecCCCHHHHHHHHHhhC
Confidence            46899999    9999999999999999999999999875320         0       12223335677777777645


Q ss_pred             ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChH
Q 018900          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       153 ~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~  212 (349)
                      +|+|||+|+.                |+.++.+++++|++.++ +|||+||..+|+. ...+++|+.+..+.    .+|.
T Consensus        61 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~  138 (315)
T 2ydy_A           61 PHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKL  138 (315)
T ss_dssp             CSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHH
T ss_pred             CCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHH
Confidence            7999999983                57889999999999887 9999999999998 45678887765543    4577


Q ss_pred             HHHHHHHhhCCcEEEEecCceeeCCCCC--CchHHHHHHHH-hCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCC--Cc
Q 018900          213 QVEKYISENFSNWASFRPQYMIGSGNNK--DCEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP--EA  287 (349)
Q Consensus       213 ~~ek~~~~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--~~  287 (349)
                      .+|+++++++++++++||+++||+....  .++..++..+. .+.++.+.+  ++.++++|++|+|++++.+++++  ..
T Consensus       139 ~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~a~~~~~~~~~~~~  216 (315)
T 2ydy_A          139 DGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDH--WQQRFPTHVKDVATVCRQLAEKRMLDP  216 (315)
T ss_dssp             HHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEEC--SSBBCCEEHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeecc--CceECcEEHHHHHHHHHHHHHhhcccc
Confidence            7888888889999999999999998752  35555666666 666665543  56789999999999999999864  11


Q ss_pred             cCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-eEEcC
Q 018900          288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYD  324 (349)
Q Consensus       288 ~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-~~~~~  324 (349)
                      ..+++||+++++.+++.|+++.+.+.+|.+.. +..++
T Consensus       217 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~  254 (315)
T 2ydy_A          217 SIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPIT  254 (315)
T ss_dssp             TCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEEC
T ss_pred             CCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccc
Confidence            23489999999999999999999999998754 44443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.98  E-value=2.3e-31  Score=250.10  Aligned_cols=231  Identities=16%  Similarity=0.161  Sum_probs=183.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCC--CcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      |+||||    ||+||||++|+++|+++ |++|++++|...  ....+...     .  ...+++++.+|   .+++.+++
T Consensus         1 MkvlVT----GasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~   69 (361)
T 1kew_A            1 MKILIT----GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-----S--ESNRYNFEHADICDSAEITRIF   69 (361)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-----T--TCTTEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEE----CCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhh-----h--cCCCeEEEECCCCCHHHHHHHH
Confidence            479999    99999999999999998 799999999752  22211110     0  02356777777   56777777


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhC--CCc-------EEEEeccccccCCCCC--C----
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS--GVK-------QFLFISSAGIYKPADE--P----  197 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~--gv~-------~~i~~Ss~~vy~~~~~--~----  197 (349)
                      +..++|+|||+|+.                |+.++.+++++|++.  +++       +||++||.++||....  .    
T Consensus        70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           70 EQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             hhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            63346999999984                467899999999988  887       9999999999986542  1    


Q ss_pred             ----CCCCCCCCCCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCc
Q 018900          198 ----PHVEGDVVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       198 ----~~~e~~~~~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                          +++|+.+..+.    .+|..+|+++++    .+++++++||+++|||+... .++..++..+..+.++.+++++.+
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ  229 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCC
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCce
Confidence                67777665442    456677776655    38999999999999998753 356677888888888888888888


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                      .++++|++|+|++++.+++++.  .|++||+++++.+++.|+++.+++.+|.+.
T Consensus       230 ~~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          230 IRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHHS
T ss_pred             eEeeEEHHHHHHHHHHHHhCCC--CCCEEEecCCCeeeHHHHHHHHHHHhCCcC
Confidence            9999999999999999998653  358999999999999999999999998643

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.98  E-value=3.2e-31  Score=243.01  Aligned_cols=213  Identities=20%  Similarity=0.224  Sum_probs=164.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      ||||||    |||||||++|+++|+++||+|++++|++....                    +..|. .....+.+  +|
T Consensus         1 MkILVT----GatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~--------------------~~~~~-~~~~~l~~--~d   53 (298)
T 4b4o_A            1 MRVLVG----GGTGFIGTALTQLLNARGHEVTLVSRKPGPGR--------------------ITWDE-LAASGLPS--CD   53 (298)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE--------------------EEHHH-HHHHCCCS--CS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe--------------------eecch-hhHhhccC--CC
Confidence            689999    99999999999999999999999999763210                    11121 12233444  59


Q ss_pred             EEEeCCCC--------------------ChhhHHHHHHHHHhCCC--cEEEEeccccccCCCCCCCCCCCCCCCCCC---
Q 018900          155 VVLDNNGK--------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDA---  209 (349)
Q Consensus       155 ~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv--~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~---  209 (349)
                      +|||+++.                    |+.++.+++++++..++  .+||+.||.++||.....++.|+.+..+..   
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~  133 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFS  133 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHH
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhH
Confidence            99999973                    35678899999988875  458999999999998888899988766531   


Q ss_pred             -ChHH--HHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 018900          210 -GHVQ--VEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  286 (349)
Q Consensus       210 -~k~~--~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  286 (349)
                       .+..  .+....+.+++++++|++.+|||+.+  .+..+......+ ....+|++++.++|||++|++++++.+++++.
T Consensus       134 ~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~--~~~~~~~~~~~~-~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~  210 (298)
T 4b4o_A          134 NLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGG--AMGHMLLPFRLG-LGGPIGSGHQFFPWIHIGDLAGILTHALEANH  210 (298)
T ss_dssp             HHHHHHHHHHCCSSSSSEEEEEEECEEECTTSH--HHHHHHHHHHTT-CCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHhhccCCceeeeeeeeEEcCCCC--chhHHHHHHhcC-CcceecccCceeecCcHHHHHHHHHHHHhCCC
Confidence             1111  12222344889999999999999753  444444444444 44566899999999999999999999999987


Q ss_pred             ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       287 ~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      .  +++||+++++++|+.|+++.+++.+|++..
T Consensus       211 ~--~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~  241 (298)
T 4b4o_A          211 V--HGVLNGVAPSSATNAEFAQTFGAALGRRAF  241 (298)
T ss_dssp             C--CEEEEESCSCCCBHHHHHHHHHHHHTCCCC
T ss_pred             C--CCeEEEECCCccCHHHHHHHHHHHhCcCCc
Confidence            6  359999999999999999999999998753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=3.1e-31  Score=250.16  Aligned_cols=237  Identities=14%  Similarity=0.124  Sum_probs=179.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc--ccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ||+||||    ||+||||++++++|+++|++|++++|+.+..  ..+.... ... .....+++++.+|   .+++.+++
T Consensus         1 m~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALIT----GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIY-QDP-HTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHh-hcc-ccCCCceEEEECCCCCHHHHHHHH
Confidence            5789999    9999999999999999999999999976431  1111000 000 0012345566666   67788888


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC---cEEEEeccccccCCCCCCCCCCCCCCCCC-
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPD-  208 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv---~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~-  208 (349)
                      ++.++|+|||+|+.                |+.++.++++++++.++   ++||++||.++|+.....+++|+.+..+. 
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~  154 (372)
T 1db3_A           75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRS  154 (372)
T ss_dssp             HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCS
T ss_pred             HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCC
Confidence            76568999999983                45689999999999988   89999999999998766678887765543 


Q ss_pred             ---CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCCC-cccCCCCCcceeeeeHHHHHH
Q 018900          209 ---AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       209 ---~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~  276 (349)
                         .+|..+|.+++.    ++++++++|+.++|||+....+    +..++..+..+.+ ...++++++.++|+|++|+|+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  234 (372)
T 1db3_A          155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK  234 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence               356666666654    4899999999999999876543    3445556666654 445688889999999999999


Q ss_pred             HHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      +++.+++++.   +++||+++++.+++.|+++.+.+.+|.+++
T Consensus       235 a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  274 (372)
T 1db3_A          235 MQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLR  274 (372)
T ss_dssp             HHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEEE
T ss_pred             HHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCCcc
Confidence            9999998765   279999999999999999999999997654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.97  E-value=6.8e-31  Score=248.92  Aligned_cols=234  Identities=15%  Similarity=0.133  Sum_probs=181.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc--cCCCCCCCcccce--ecC-CCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEI--VSA-GGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~~~l--~~~-~~~~~~~D---~~~l  144 (349)
                      |+++||||    ||+||||++|+++|+++|++|++++|+.+...  .+...    ..++  ... +++++.+|   .+++
T Consensus        27 M~k~vlVt----GatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~   98 (381)
T 1n7h_A           27 PRKIALIT----GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHI----YIDPHNVNKALMKLHYADLTDASSL   98 (381)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTT----C--------CCEEEEECCTTCHHHH
T ss_pred             hCCeEEEE----cCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhh----hhccccccccceEEEECCCCCHHHH
Confidence            44799999    99999999999999999999999999865421  11100    0000  012 56677777   5677


Q ss_pred             HhhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCc-----EEEEeccccccCCCCCCCCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~-----~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      .+++++.++|+|||+|+.                |+.++.+++++|++.+++     +|||+||.++||.... +++|+.
T Consensus        99 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~  177 (381)
T 1n7h_A           99 RRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETT  177 (381)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTS
T ss_pred             HHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCC
Confidence            778876568999999983                456799999999988776     9999999999998766 888877


Q ss_pred             CCCCC----CChHHHHHHHHhh----CCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCCCc-ccCCCCCcceeeee
Q 018900          204 VVKPD----AGHVQVEKYISEN----FSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRPV-PIPGSGMQFTNIAH  270 (349)
Q Consensus       204 ~~~~~----~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~  270 (349)
                      +..+.    .+|..+|.++.++    +++++++|+.++|||+....+    +..++..+..+.+. ..++++++.++|+|
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~  257 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  257 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEE
Confidence            65543    4566677766543    899999999999999876543    33445556666543 45678888999999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                      ++|+|++++.+++++.   +++||+++++.+++.|+++.+.+.+|.+.
T Consensus       258 v~Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          258 AGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             HHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             HHHHHHHHHHHHhCCC---CCeEEeeCCCCCcHHHHHHHHHHHcCCCc
Confidence            9999999999998765   27999999999999999999999999864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.97  E-value=1.7e-30  Score=244.38  Aligned_cols=230  Identities=17%  Similarity=0.164  Sum_probs=182.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-----CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-----~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~  145 (349)
                      +|+||||    ||+||||++++++|+++|     ++|++++|......            +...+++++.+|   .+++.
T Consensus         1 ~~~vlVt----GatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------------~~~~~~~~~~~Dl~d~~~~~   64 (364)
T 2v6g_A            1 SSVALIV----GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------------HEDNPINYVQCDISDPDDSQ   64 (364)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------------CCSSCCEEEECCTTSHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------------cccCceEEEEeecCCHHHHH
Confidence            3789999    999999999999999999     99999999875432            112357777777   56788


Q ss_pred             hhhcCCC-ccEEEeCCCC-----------ChhhHHHHHHHHHhC--CCcEEE-------EeccccccCCC--CCCCCCCC
Q 018900          146 NVVGGVT-FDVVLDNNGK-----------NLDAVRPVADWAKSS--GVKQFL-------FISSAGIYKPA--DEPPHVEG  202 (349)
Q Consensus       146 ~~~~~~~-~d~Vi~~a~~-----------~~~~~~~ll~~a~~~--gv~~~i-------~~Ss~~vy~~~--~~~~~~e~  202 (349)
                      +++++.+ +|+|||+|+.           |+.++.+++++|++.  ++++||       |+||.++||..  ...+++|+
T Consensus        65 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~  144 (364)
T 2v6g_A           65 AKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTED  144 (364)
T ss_dssp             HHHTTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTT
T ss_pred             HHHhcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcc
Confidence            8888765 7999999983           578899999999998  899998       79999999975  34577888


Q ss_pred             CCCCC-CCChHHHHHHHHhh----C-CcEEEEecCceeeCCCCCC---chHHH-HHHH--HhCCCcccCCCCCc---cee
Q 018900          203 DVVKP-DAGHVQVEKYISEN----F-SNWASFRPQYMIGSGNNKD---CEEWF-FDRI--VRKRPVPIPGSGMQ---FTN  267 (349)
Q Consensus       203 ~~~~~-~~~k~~~ek~~~~~----~-~~~~ilR~~~v~g~~~~~~---~~~~~-~~~~--~~~~~~~~~~~~~~---~~~  267 (349)
                      .+..+ ....+.+|+++.++    + ++++++||+++|||+....   ....+ +..+  ..+.++.+++++++   ..+
T Consensus       145 ~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~  224 (364)
T 2v6g_A          145 LPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSD  224 (364)
T ss_dssp             SCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBC
T ss_pred             ccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCC
Confidence            76554 33346778877663    5 9999999999999987532   23332 3334  36777777887743   467


Q ss_pred             eeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCcee
Q 018900          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI  320 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~  320 (349)
                      ++|++|+|++++.+++++... |++||+++++.+|+.|+++.+++.+|.+...
T Consensus       225 ~~~v~Dva~a~~~~~~~~~~~-g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  276 (364)
T 2v6g_A          225 CSDADLIAEHHIWAAVDPYAK-NEAFNVSNGDVFKWKHFWKVLAEQFGVECGE  276 (364)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGT-TEEEEECCSCCBCHHHHHHHHHHHHTCCBCC
T ss_pred             CCcHHHHHHHHHHHHhCCCCC-CceEEecCCCcCCHHHHHHHHHHHhCCCCCC
Confidence            888999999999999987543 4899999999999999999999999987553

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=1.3e-30  Score=243.01  Aligned_cols=233  Identities=17%  Similarity=0.132  Sum_probs=181.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +|+||||    ||+||||++++++|+++|++|++++|+.+....      .....+ ...+++++.+|   .+++.++++
T Consensus         3 ~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (345)
T 2z1m_A            3 GKRALIT----GIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS------WRLKELGIENDVKIIHMDLLEFSNIIRTIE   72 (345)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT------HHHHHTTCTTTEEECCCCTTCHHHHHHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCCccccc------ccHhhccccCceeEEECCCCCHHHHHHHHH
Confidence            5789999    999999999999999999999999998754321      001111 01245566666   677778887


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-cEEEEeccccccCCCCCCCCCCCCCCCCC----
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPD----  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----  208 (349)
                      +.++|+|||+|+.                |+.++.+++++|++.++ ++||++||.++||.....++.|+.+..+.    
T Consensus        73 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~  152 (345)
T 2z1m_A           73 KVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYA  152 (345)
T ss_dssp             HHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             hcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhH
Confidence            6668999999983                46779999999998887 89999999999998777778887665442    


Q ss_pred             CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCch----HHHHHHHHhCCCc-ccCCCCCcceeeeeHHHHHHHHH
Q 018900          209 AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       209 ~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                      .+|..+|.+++.    ++++++++|+.++|||+......    ..++..+..+... ..++++.+.++++|++|+|++++
T Consensus       153 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~  232 (345)
T 2z1m_A          153 VAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMW  232 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHH
Confidence            456677776654    38999999999999998655432    2334455566543 35677788899999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      .+++++..   ++||+++++.+++.|+++.+++.+|.+..
T Consensus       233 ~~~~~~~~---~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  269 (345)
T 2z1m_A          233 LMMQQPEP---DDYVIATGETHTVREFVEKAAKIAGFDIE  269 (345)
T ss_dssp             HHHTSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             HHHhCCCC---ceEEEeCCCCccHHHHHHHHHHHhCCCcc
Confidence            99987652   68999999999999999999999998754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.97  E-value=9.9e-30  Score=234.70  Aligned_cols=245  Identities=16%  Similarity=0.138  Sum_probs=182.6

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +||||    ||+||||++++++|+++  |++|++++|......                +++++.+|   .+++.++++.
T Consensus         1 ~vlVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------------~~~~~~~D~~d~~~~~~~~~~   60 (317)
T 3ajr_A            1 MILVT----GSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------------GIKFITLDVSNRDEIDRAVEK   60 (317)
T ss_dssp             CEEEE----STTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------------TCCEEECCTTCHHHHHHHHHH
T ss_pred             CEEEE----cCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------------CceEEEecCCCHHHHHHHHhh
Confidence            59999    99999999999999998  899999998754321                34556666   6778888874


Q ss_pred             CCccEEEeCCCC---------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCC-CCCCCCCCCCCCC----CC
Q 018900          151 VTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPD----AG  210 (349)
Q Consensus       151 ~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~-~~~~~e~~~~~~~----~~  210 (349)
                      .++|+|||+|+.               |+.++.+++++|++.++++||++||.++|+... ..+..|+.+..+.    .+
T Consensus        61 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~s  140 (317)
T 3ajr_A           61 YSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVT  140 (317)
T ss_dssp             TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHH
T ss_pred             cCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHH
Confidence            457999999984               456789999999999999999999999998753 2355565554432    45


Q ss_pred             hHHHHHHHHh----hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHH
Q 018900          211 HVQVEKYISE----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA  281 (349)
Q Consensus       211 k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  281 (349)
                      |..+|++++.    ++++++++||+++||+....     .....++.....++++..++++++.++++|++|+|++++.+
T Consensus       141 K~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  220 (317)
T 3ajr_A          141 KIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDL  220 (317)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHH
Confidence            6666766543    48999999999999975321     22333344555666777777788889999999999999999


Q ss_pred             hcCCCcc--CCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCC--------CccCCCccc---cCCCccce
Q 018900          282 VENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP--------KAAGIDAKK---AFPFRNMV  342 (349)
Q Consensus       282 ~~~~~~~--~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~--------~~~~~~~~k---~~g~~p~~  342 (349)
                      ++++...  .+++||+++ +.+++.|+++.+.+.+|. .++...+.        .....+..|   .+||+|++
T Consensus       221 l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  292 (317)
T 3ajr_A          221 YEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEY  292 (317)
T ss_dssp             HHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCC
T ss_pred             HhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcCCCCCC
Confidence            9887542  247999996 579999999999999983 23333332        011223333   49999975

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=2.3e-30  Score=262.25  Aligned_cols=228  Identities=18%  Similarity=0.230  Sum_probs=185.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh---h-HHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA---E-VGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~---~-l~~~  147 (349)
                      ++|+||||    ||+||||++++++|+++ |++|++++|+......+.          ...+++++.+|..   + +.++
T Consensus       314 ~~~~VLVT----GatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----------~~~~v~~v~~Dl~d~~~~~~~~  379 (660)
T 1z7e_A          314 RRTRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYH  379 (660)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----------TCTTEEEEECCTTTCHHHHHHH
T ss_pred             cCceEEEE----cCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----------cCCceEEEECCCCCcHHHHHHh
Confidence            56899999    99999999999999998 899999999875443211          1236778888843   2 5566


Q ss_pred             hcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC------
Q 018900          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------  205 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~------  205 (349)
                      +++  +|+|||+|+.                |+.++.+++++|++.+ +||||+||.++|+.....+++|+.+.      
T Consensus       380 ~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~  456 (660)
T 1z7e_A          380 VKK--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  456 (660)
T ss_dssp             HHH--CSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCT
T ss_pred             hcC--CCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcc
Confidence            664  5999999983                4678999999999999 89999999999998766677887642      


Q ss_pred             -----CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCC---------CCchHHHHHHHHhCCCcccCCCCCccee
Q 018900          206 -----KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNN---------KDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       206 -----~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                           .+..+|..+|+++.+    .+++++++||+++||++..         ..++..++..+..+.++.+++++++.++
T Consensus       457 ~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~  536 (660)
T 1z7e_A          457 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  536 (660)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEE
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEE
Confidence                 123467777877743    4899999999999999864         2356778888889998888888888999


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC-ccCHHHHHHHHHHHhCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~-~~t~~el~~~~~~~~g~~  317 (349)
                      |+|++|+|++++.+++++.. ..+++||+++++ .+++.|+++.+.+.+|.+
T Consensus       537 ~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          537 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH  588 (660)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred             EEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence            99999999999999998752 245899999986 899999999999999864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=3.5e-30  Score=234.41  Aligned_cols=217  Identities=16%  Similarity=0.200  Sum_probs=174.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+||||    ||+||+|++++++|+++  |++|++++|+.+...           .+...+++++.+|   ++++.++++
T Consensus         1 ~~ilVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~l~~~~~~~~~~D~~d~~~l~~~~~   65 (287)
T 2jl1_A            1 FSIAVT----GATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-----------TLADQGVEVRHGDYNQPESLQKAFA   65 (287)
T ss_dssp             CCEEET----TTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-----------HHHHTTCEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEE----cCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-----------HHhhcCCeEEEeccCCHHHHHHHHh
Confidence            579999    99999999999999999  999999999764332           2223467777777   567888887


Q ss_pred             CCCccEEEeCCCC------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCC
Q 018900          150 GVTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS  223 (349)
Q Consensus       150 ~~~~d~Vi~~a~~------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~  223 (349)
                      +  +|+|||+++.      |+.++.+++++|++.|++|||++||.++|..          +..+..+|..+|+++++.++
T Consensus        66 ~--~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~~~y~~~K~~~E~~~~~~~~  133 (287)
T 2jl1_A           66 G--VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES----------IIPLAHVHLATEYAIRTTNI  133 (287)
T ss_dssp             T--CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC----------CSTHHHHHHHHHHHHHHTTC
T ss_pred             c--CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------CCchHHHHHHHHHHHHHcCC
Confidence            6  5999999996      7889999999999999999999999988742          11344579999999999999


Q ss_pred             cEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCH
Q 018900          224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  303 (349)
Q Consensus       224 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~  303 (349)
                      +++++||+.++|+....     ++..+...+... .+.+++.++++|++|+|++++.+++++.. .|++||+++++.+|+
T Consensus       134 ~~~ilrp~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~s~  206 (287)
T 2jl1_A          134 PYTFLRNALYTDFFVNE-----GLRASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGH-ENKTYNLVSNQPWTF  206 (287)
T ss_dssp             CEEEEEECCBHHHHSSG-----GGHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSC-TTEEEEECCSSCBCH
T ss_pred             CeEEEECCEeccccchh-----hHHHHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCC-CCcEEEecCCCcCCH
Confidence            99999999988864221     233333323333 34466778999999999999999988654 348999999999999


Q ss_pred             HHHHHHHHHHhCCCceeEEcCC
Q 018900          304 DGMAKLCAQAAGLPVEIVHYDP  325 (349)
Q Consensus       304 ~el~~~~~~~~g~~~~~~~~~~  325 (349)
                      .|+++.+.+.+|.++++..+|.
T Consensus       207 ~e~~~~i~~~~g~~~~~~~~~~  228 (287)
T 2jl1_A          207 DELAQILSEVSGKKVVHQPVSF  228 (287)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCH
T ss_pred             HHHHHHHHHHHCCcceEEeCCH
Confidence            9999999999999988877764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.97  E-value=1.5e-29  Score=236.08  Aligned_cols=253  Identities=17%  Similarity=0.160  Sum_probs=191.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-------CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA  142 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-------~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~  142 (349)
                      ++|+||||    ||+||||++++++|+++|       ++|++++|..+....           ....+++++.+|   .+
T Consensus        13 ~~~~vlVt----Ga~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----------~~~~~~~~~~~Dl~d~~   77 (342)
T 2hrz_A           13 QGMHIAII----GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----------GFSGAVDARAADLSAPG   77 (342)
T ss_dssp             SCEEEEEE----TTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----------TCCSEEEEEECCTTSTT
T ss_pred             cCCEEEEE----CCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----------ccCCceeEEEcCCCCHH
Confidence            56899999    999999999999999999       899999998643321           012345666676   56


Q ss_pred             hHHhhhcCCCccEEEeCCCC---------------ChhhHHHHHHHHHhCC-----CcEEEEeccccccCCCCCCCCCCC
Q 018900          143 EVGNVVGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-----VKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~g-----v~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      ++.+++.+ ++|+|||+|+.               |+.++.+++++|++.+     +++||++||.++|+.....+++|+
T Consensus        78 ~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  156 (342)
T 2hrz_A           78 EAEKLVEA-RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE  156 (342)
T ss_dssp             HHHHHHHT-CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT
T ss_pred             HHHHHHhc-CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC
Confidence            67777742 46999999983               5678999999998876     899999999999998655688888


Q ss_pred             CCCCCC----CChHHHHHHHHhh----CCcEEEEecCceee-CCCCC----CchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          203 DVVKPD----AGHVQVEKYISEN----FSNWASFRPQYMIG-SGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       203 ~~~~~~----~~k~~~ek~~~~~----~~~~~ilR~~~v~g-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      .+..+.    .+|..+|+++.++    +++++++|++++|| |+...    .++..++..+..+.+..+++.++...+++
T Consensus       157 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (342)
T 2hrz_A          157 FHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHA  236 (342)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeE
Confidence            776543    4566777776554    68999999999998 66432    24556677777888776766666777899


Q ss_pred             eHHHHHHHHHHHhcCCCc--cCCCEEEeeCCCccCHHHHHHHHHHHhCCCc--eeEEcCCCc-------c--CCCccc--
Q 018900          270 HVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV--EIVHYDPKA-------A--GIDAKK--  334 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~--~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~--~~~~~~~~~-------~--~~~~~k--  334 (349)
                      |++|+|++++.+++.+..  ..+++||++ ++.+++.|+++.+.+.+|.+.  .+...+.+.       .  ..+..|  
T Consensus       237 ~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  315 (342)
T 2hrz_A          237 SPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRAR  315 (342)
T ss_dssp             CHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHH
T ss_pred             ehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHH
Confidence            999999999999987643  234799996 567999999999999999764  233333221       0  123333  


Q ss_pred             cCCCccce
Q 018900          335 AFPFRNMV  342 (349)
Q Consensus       335 ~~g~~p~~  342 (349)
                      .+||+|+.
T Consensus       316 ~lG~~p~~  323 (342)
T 2hrz_A          316 ELGFTAES  323 (342)
T ss_dssp             HTTCCCCS
T ss_pred             HcCCCCCC
Confidence            39999964

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=2.2e-29  Score=256.75  Aligned_cols=261  Identities=18%  Similarity=0.215  Sum_probs=187.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+||||++|+++|+++|++|++++|......+.    ...+..+...+++++.+|   .+++.++++
T Consensus        10 ~~~~ilVT----GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~----~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~   81 (699)
T 1z45_A           10 TSKIVLVT----GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS----VARLEVLTKHHIPFYEVDLCDRKGLEKVFK   81 (699)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHH----HHHHHHHHTSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHH----HHHHhhccCCceEEEEcCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999976432100    001111223467777777   567777887


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCC----CCCCCCCCCCCC--
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKP--  207 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~----~~~~~e~~~~~~--  207 (349)
                      ..++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+...    ..++.|+.+..+  
T Consensus        82 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~  161 (699)
T 1z45_A           82 EYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTN  161 (699)
T ss_dssp             HSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCS
T ss_pred             hCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCC
Confidence            4457999999984                457889999999999999999999999998642    245666655443  


Q ss_pred             --CCChHHHHHHHHh------hCCcEEEEecCceeeCCCC-----------CCchHHHHHHHHhC--CCcccCC------
Q 018900          208 --DAGHVQVEKYISE------NFSNWASFRPQYMIGSGNN-----------KDCEEWFFDRIVRK--RPVPIPG------  260 (349)
Q Consensus       208 --~~~k~~~ek~~~~------~~~~~~ilR~~~v~g~~~~-----------~~~~~~~~~~~~~~--~~~~~~~------  260 (349)
                        ..+|..+|+++++      .+++++++||+++||++..           ..++. ++..+..+  .++.+++      
T Consensus       162 ~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~  240 (699)
T 1z45_A          162 PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLP-YMAQVAVGRREKLYIFGDDYDSR  240 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHH-HHHHHHTTSSSCCCCC------C
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHH-HHHHHHhcCCCceEEeCCcccCC
Confidence              2467778887765      4899999999999998532           12333 33444433  4666766      


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCC-----ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCC-----ccCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPE-----AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-----AAGI  330 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~-----~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~-----~~~~  330 (349)
                      ++++.++|||++|+|++++.+++...     ...+++||+++++.+++.|+++.+++.+|.++++...+..     ....
T Consensus       241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  320 (699)
T 1z45_A          241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTA  320 (699)
T ss_dssp             CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCB
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccC
Confidence            67888999999999999999987531     1123799999999999999999999999988665443322     1223


Q ss_pred             Ccc---ccCCCccce
Q 018900          331 DAK---KAFPFRNMV  342 (349)
Q Consensus       331 ~~~---k~~g~~p~~  342 (349)
                      +..   +.+||+|+.
T Consensus       321 d~~ka~~~LG~~p~~  335 (699)
T 1z45_A          321 KPDRAKRELKWQTEL  335 (699)
T ss_dssp             CCHHHHHHTCCCCCC
T ss_pred             CHHHHHHhcCCCCCC
Confidence            333   349999964

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=2.9e-30  Score=243.68  Aligned_cols=202  Identities=15%  Similarity=0.143  Sum_probs=174.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      ||||||    ||+||+|++|+++|+++|+ +|++++|.                           .|.+++.+++++  +
T Consensus         1 M~VlVt----GatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~--~   47 (369)
T 3st7_A            1 MNIVIT----GAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLK--A   47 (369)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHH--C
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhcc--C
Confidence            589999    9999999999999999999 99999885                           177888888876  5


Q ss_pred             cEEEeCCCC------------ChhhHHHHHHHHHhCCCc-EEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh
Q 018900          154 DVVLDNNGK------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (349)
Q Consensus       154 d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~  220 (349)
                      |+|||+|+.            |+.++.+++++|++.+++ +|||+||.++|+           ...+..+|..+|+++++
T Consensus        48 d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-----------~~~Y~~sK~~~E~~~~~  116 (369)
T 3st7_A           48 DFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-----------DNPYGESKLQGEQLLRE  116 (369)
T ss_dssp             SEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-----------CSHHHHHHHHHHHHHHH
T ss_pred             CEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-----------CCCchHHHHHHHHHHHH
Confidence            999999983            788999999999999987 999999999988           11233578888988876


Q ss_pred             ----hCCcEEEEecCceeeCCCCC---CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEE
Q 018900          221 ----NFSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  293 (349)
Q Consensus       221 ----~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~  293 (349)
                          .+++++++||+++||++...   .++..++..+..+.++.+. ++++.++++|++|+|++++.+++++....+++|
T Consensus       117 ~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  195 (369)
T 3st7_A          117 YAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPTIENGVP  195 (369)
T ss_dssp             HHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS-CTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEE
T ss_pred             HHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec-CCCeEEEEEEHHHHHHHHHHHHhCCcccCCceE
Confidence                69999999999999998754   3777888888888887664 678889999999999999999999876434899


Q ss_pred             EeeCCCccCHHHHHHHHHHHhCCCceeE
Q 018900          294 NLVSDRAVTLDGMAKLCAQAAGLPVEIV  321 (349)
Q Consensus       294 ~i~~~~~~t~~el~~~~~~~~g~~~~~~  321 (349)
                      |+++++.+|+.|+++.+++.+|.+..+.
T Consensus       196 ~i~~~~~~s~~e~~~~~~~~~g~~~~~~  223 (369)
T 3st7_A          196 TVPNVFKVTLGEIVDLLYKFKQSRLDRT  223 (369)
T ss_dssp             CCSCCEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred             EeCCCCceeHHHHHHHHHHHhCCCcccc
Confidence            9999999999999999999999765443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=1.4e-29  Score=249.46  Aligned_cols=215  Identities=19%  Similarity=0.223  Sum_probs=161.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh-hhHHhhhcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AEVGNVVGGVT  152 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-~~l~~~~~~~~  152 (349)
                      +|+||||    ||+||||++|+++|+++||+|++++|+.....                   .+.+|. +.+.+++.+  
T Consensus       147 ~m~VLVT----GatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------------------~v~~d~~~~~~~~l~~--  201 (516)
T 3oh8_A          147 PLTVAIT----GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------------------KRFWDPLNPASDLLDG--  201 (516)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------------------CEECCTTSCCTTTTTT--
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------------------ceeecccchhHHhcCC--
Confidence            7899999    99999999999999999999999999875431                   122332 223445544  


Q ss_pred             ccEEEeCCCC-----------------ChhhHHHHHHH-HHhCCCcEEEEeccccccC-CCCCCCCCCCCCCCCC---CC
Q 018900          153 FDVVLDNNGK-----------------NLDAVRPVADW-AKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPD---AG  210 (349)
Q Consensus       153 ~d~Vi~~a~~-----------------~~~~~~~ll~~-a~~~gv~~~i~~Ss~~vy~-~~~~~~~~e~~~~~~~---~~  210 (349)
                      +|+|||+|+.                 |+.++.+++++ +++.++++|||+||.++|| .....++.|+.+....   ..
T Consensus       202 ~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~  281 (516)
T 3oh8_A          202 ADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEV  281 (516)
T ss_dssp             CSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHH
T ss_pred             CCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHH
Confidence            5999999983                 67789999998 6778899999999999999 4444577777765221   12


Q ss_pred             hHHHHHHH---HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 018900          211 HVQVEKYI---SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       211 k~~~ek~~---~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      |...|+++   .+.|++++++||+++||++.  .++..++..+..+.. ..++++++.++|||++|+|++++.+++++..
T Consensus       282 ~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~  358 (516)
T 3oh8_A          282 CRDWEHATAPASDAGKRVAFIRTGVALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI  358 (516)
T ss_dssp             HHHHHHTTHHHHHTTCEEEEEEECEEEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEeeEEECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc
Confidence            33344433   34599999999999999984  345555444444433 4678888999999999999999999998764


Q ss_pred             cCCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          288 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       288 ~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                        +++||+++++.+++.|+++.+++.+|.+.
T Consensus       359 --~g~~ni~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          359 --SGPINAVAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             --CEEEEESCSCCEEHHHHHHHTTC------
T ss_pred             --CCcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence              36999999999999999999999999875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.96  E-value=3.2e-29  Score=227.81  Aligned_cols=215  Identities=16%  Similarity=0.192  Sum_probs=171.2

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +||||    ||+|++|++++++|+++  |++|++++|+.+...           .+...+++++.+|   ++++.+++++
T Consensus         1 ~ilVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~D~~d~~~~~~~~~~   65 (286)
T 2zcu_A            1 MIAIT----GATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-----------ALAAQGITVRQADYGDEAALTSALQG   65 (286)
T ss_dssp             CEEEE----STTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH-----------HHHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEE----cCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh-----------hhhcCCCeEEEcCCCCHHHHHHHHhC
Confidence            58999    99999999999999999  999999999764332           2223467777777   5778888876


Q ss_pred             CCccEEEeCCCC----ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcEE
Q 018900          151 VTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (349)
Q Consensus       151 ~~~d~Vi~~a~~----~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~~  226 (349)
                      .  |+|||+++.    ++.++++++++|++.|++|||++||.++|..          +..+..+|..+|+++++.+++++
T Consensus        66 ~--d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~~~y~~sK~~~e~~~~~~~~~~~  133 (286)
T 2zcu_A           66 V--EKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----------PLGLADEHIETEKMLADSGIVYT  133 (286)
T ss_dssp             C--SEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----------CSTTHHHHHHHHHHHHHHCSEEE
T ss_pred             C--CEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------cchhHHHHHHHHHHHHHcCCCeE
Confidence            4  999999984    5789999999999999999999999988721          12345689999999999999999


Q ss_pred             EEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHH
Q 018900          227 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  306 (349)
Q Consensus       227 ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el  306 (349)
                      ++||+.++++..      .++..+..++.+. .+.+++.++++|++|+|++++.+++++.. .+++||+++++.+|+.|+
T Consensus       134 ilrp~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~s~~e~  205 (286)
T 2zcu_A          134 LLRNGWYSENYL------ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGH-EGKVYELAGDSAWTLTQL  205 (286)
T ss_dssp             EEEECCBHHHHH------TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSC-TTCEEEECCSSCBCHHHH
T ss_pred             EEeChHHhhhhH------HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCC-CCceEEEeCCCcCCHHHH
Confidence            999987666432      1233444444444 45567788999999999999999998654 348999999989999999


Q ss_pred             HHHHHHHhCCCceeEEcCC
Q 018900          307 AKLCAQAAGLPVEIVHYDP  325 (349)
Q Consensus       307 ~~~~~~~~g~~~~~~~~~~  325 (349)
                      ++.+.+.+|.++++..+|.
T Consensus       206 ~~~i~~~~g~~~~~~~~~~  224 (286)
T 2zcu_A          206 AAELTKQSGKQVTYQNLSE  224 (286)
T ss_dssp             HHHHHHHHSSCCEEEECCH
T ss_pred             HHHHHHHHCCCCceeeCCH
Confidence            9999999999988877764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.96  E-value=1.6e-28  Score=223.94  Aligned_cols=216  Identities=13%  Similarity=0.142  Sum_probs=171.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |+||||    ||||+||++++++|+++ |++|++++|+.+...           .+...+++++.+|   ++++.+++++
T Consensus         1 M~ilVt----GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~-----------~~~~~~v~~~~~D~~d~~~l~~~~~~   65 (289)
T 3e48_A            1 MNIMLT----GATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-----------DDWRGKVSVRQLDYFNQESMVEAFKG   65 (289)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC-----------GGGBTTBEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEE----cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH-----------HhhhCCCEEEEcCCCCHHHHHHHHhC
Confidence            579999    99999999999999998 999999999875443           2234578888887   6778888876


Q ss_pred             CCccEEEeCCCC------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCc
Q 018900          151 VTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (349)
Q Consensus       151 ~~~d~Vi~~a~~------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~  224 (349)
                      .  |+|||+++.      ++.++++++++|++.|++||||+||.+.   ....++      .....+..+|+.+++.+++
T Consensus        66 ~--d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~~~~------~~~~~~~~~e~~~~~~g~~  134 (289)
T 3e48_A           66 M--DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHNNPF------HMSPYFGYASRLLSTSGID  134 (289)
T ss_dssp             C--SEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STTCCS------TTHHHHHHHHHHHHHHCCE
T ss_pred             C--CEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCCCCC------ccchhHHHHHHHHHHcCCC
Confidence            5  999999995      4688999999999999999999999542   111111      1111234578888899999


Q ss_pred             EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHH
Q 018900          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       225 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~  304 (349)
                      ++++||++++|+..      .++..+..+.. ..++.++..+++++++|+|++++.++.++... |++||++ ++.+|+.
T Consensus       135 ~~ilrp~~~~~~~~------~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s~~  205 (289)
T 3e48_A          135 YTYVRMAMYMDPLK------PYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYDMK  205 (289)
T ss_dssp             EEEEEECEESTTHH------HHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEEHH
T ss_pred             EEEEeccccccccH------HHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCCHH
Confidence            99999999998631      23444444333 33455778899999999999999999998765 4899999 9999999


Q ss_pred             HHHHHHHHHhCCCceeEEcCC
Q 018900          305 GMAKLCAQAAGLPVEIVHYDP  325 (349)
Q Consensus       305 el~~~~~~~~g~~~~~~~~~~  325 (349)
                      |+++.+.+.+|.++++..++.
T Consensus       206 e~~~~~~~~~g~~~~~~~~~~  226 (289)
T 3e48_A          206 ELAAILSEASGTEIKYEPVSL  226 (289)
T ss_dssp             HHHHHHHHHHTSCCEECCCCH
T ss_pred             HHHHHHHHHHCCceeEEeCCH
Confidence            999999999999988877654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.96  E-value=3.1e-29  Score=234.60  Aligned_cols=235  Identities=16%  Similarity=0.192  Sum_probs=181.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +|+||||    ||||++|++|+++|+++|++|++++|+.......    ......+...+++++.+|   .+++.++++.
T Consensus        10 ~~~IlVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~----~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A           10 KGRVLIA----GATGFIGQFVATASLDAHRPTYILARPGPRSPSK----AKIFKALEDKGAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             -CCEEEE----CTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH----HHHHHHHHHTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEE----CCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhH----HHHHHHHHhCCcEEEEeecCCHHHHHHHHhh
Confidence            5789999    9999999999999999999999999986321100    001123345688888887   6778888984


Q ss_pred             CCccEEEeCCCC-ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCCCCCCC----CCChHHHHHHHHhhCCc
Q 018900          151 VTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN  224 (349)
Q Consensus       151 ~~~d~Vi~~a~~-~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k~~~ek~~~~~~~~  224 (349)
                      .++|+|||+++. |+.++.+++++|++.| +++||+ |   +||..    .+|..+..+    ..+|..+|+++++.+++
T Consensus        82 ~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~  153 (346)
T 3i6i_A           82 HEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRADPVEPGLNMYREKRRVRQLVEESGIP  153 (346)
T ss_dssp             TTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTCCCCTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCccCcCCCcchHHHHHHHHHHHHHHcCCC
Confidence            456999999995 8999999999999999 999996 4   45532    333333322    25688899999999999


Q ss_pred             EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC-CCccCH
Q 018900          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAVTL  303 (349)
Q Consensus       225 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~-~~~~t~  303 (349)
                      ++++||++++|...... .. .......++.+.+++++++.++|+|++|+|++++.+++++...+ ++|++++ ++.+|+
T Consensus       154 ~tivrpg~~~g~~~~~~-~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~g~~~~~s~  230 (346)
T 3i6i_A          154 FTYICCNSIASWPYYNN-IH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLN-KSVHFRPSCNCLNI  230 (346)
T ss_dssp             BEEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTT-EEEECCCGGGEECH
T ss_pred             EEEEEecccccccCccc-cc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccC-eEEEEeCCCCCCCH
Confidence            99999999999764331 11 11122256677889999999999999999999999999986544 8899885 578999


Q ss_pred             HHHHHHHHHHhCCCceeEEcCCCc
Q 018900          304 DGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       304 ~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      .|+++.+++.+|.++++.+++.+.
T Consensus       231 ~e~~~~~~~~~g~~~~~~~~~~~~  254 (346)
T 3i6i_A          231 NELASVWEKKIGRTLPRVTVTEDD  254 (346)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECHHH
T ss_pred             HHHHHHHHHHHCCCCceEecCHHH
Confidence            999999999999999888776553

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=1.6e-28  Score=221.73  Aligned_cols=232  Identities=18%  Similarity=0.211  Sum_probs=177.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |+||||    ||+|+||++++++|++ |++|++++|+.+..                .++..+..|++++.+++++.++|
T Consensus         1 m~ilVt----GatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~~~~Dl~~~~~~~~~~~~~~~d   59 (273)
T 2ggs_A            1 MRTLIT----GASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GGYKLDLTDFPRLEDFIIKKRPD   59 (273)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TCEECCTTSHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CCceeccCCHHHHHHHHHhcCCC
Confidence            479999    9999999999999994 89999999986310                01222333577888888765579


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||+|+.                |+.++.++++++++.++ +||++||.++|+.... ++.|+.+..+.    .+|..+
T Consensus        60 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~  137 (273)
T 2ggs_A           60 VIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLG  137 (273)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHH
T ss_pred             EEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHH
Confidence            99999984                45679999999999887 9999999999987654 77777765542    356666


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~  294 (349)
                      |.+++.  ++++++||+.+||+   ..+...++..+..+.++.++++   .++++|++|+|++++.+++++.  + ++||
T Consensus       138 e~~~~~--~~~~~iR~~~v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~-g~~~  206 (273)
T 2ggs_A          138 ETFALQ--DDSLIIRTSGIFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--T-GIIH  206 (273)
T ss_dssp             HHHHCC--TTCEEEEECCCBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--C-EEEE
T ss_pred             HHHHhC--CCeEEEeccccccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--C-CeEE
Confidence            777766  88999999999982   3455556666777777766653   6889999999999999998764  3 5999


Q ss_pred             eeCCCccCHHHHHHHHHHHhCCCceeEEcC---------CCccCCCccc---cCCCccc
Q 018900          295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYD---------PKAAGIDAKK---AFPFRNM  341 (349)
Q Consensus       295 i~~~~~~t~~el~~~~~~~~g~~~~~~~~~---------~~~~~~~~~k---~~g~~p~  341 (349)
                      +++ +.+++.|+++.+.+.+|.+.++....         +.....+..|   .+||+|+
T Consensus       207 i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~  264 (273)
T 2ggs_A          207 VAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFY  264 (273)
T ss_dssp             CCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCC
T ss_pred             ECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCC
Confidence            999 89999999999999999886654211         1112334444   3999994

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.2e-28  Score=240.54  Aligned_cols=243  Identities=16%  Similarity=0.228  Sum_probs=181.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhC---CCeEEEEEcCCCCcccCC---CCCC-------CcccceecCCCeEE
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS---GHEVTIMTVGDENSDKMK---KPPF-------NRFNEIVSAGGKTV  137 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~---g~~V~~l~R~~~~~~~~~---~~~~-------~~~~~l~~~~~~~~  137 (349)
                      ...+|+||||    ||+||||++|+++|+++   |++|++++|+.+......   ....       ..+.+....+++++
T Consensus        70 ~~~~~~VLVT----GatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v  145 (478)
T 4dqv_A           70 SPELRTVLLT----GATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVV  145 (478)
T ss_dssp             CSCCCEEEEE----CTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEE
T ss_pred             CCCCCEEEEE----CCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEE
Confidence            3468899999    99999999999999999   999999999865321100   0000       00111123577888


Q ss_pred             EcCh---------hhHHhhhcCCCccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC
Q 018900          138 WGDP---------AEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       138 ~~D~---------~~l~~~~~~~~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      .+|.         +.+.+++++  +|+|||+|+.            |+.++.+++++|++.++++|||+||.++|+....
T Consensus       146 ~~Dl~~~~~gld~~~~~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~  223 (478)
T 4dqv_A          146 AGDKSEPDLGLDQPMWRRLAET--VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP  223 (478)
T ss_dssp             ECCTTSGGGGCCHHHHHHHHHH--CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred             EeECCCcccCCCHHHHHHHHcC--CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence            8874         367777764  5999999984            6789999999999999999999999999998777


Q ss_pred             CCCCCCCCCC---------------CCCChHHHHHHHHhh----CCcEEEEecCceeeCCCCC------CchHHHHHHHH
Q 018900          197 PPHVEGDVVK---------------PDAGHVQVEKYISEN----FSNWASFRPQYMIGSGNNK------DCEEWFFDRIV  251 (349)
Q Consensus       197 ~~~~e~~~~~---------------~~~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~  251 (349)
                      .++.|+.+..               +..+|+.+|.+++++    +++++++||++|||+....      .++..++....
T Consensus       224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~  303 (478)
T 4dqv_A          224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLM  303 (478)
T ss_dssp             TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHH
T ss_pred             CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHH
Confidence            7788876532               445678888887764    9999999999999985421      24445555444


Q ss_pred             hCCCcc--cCCC------CCcceeeeeHHHHHHHHHHHhcC----CCccCCCEEEeeCCCc--cCHHHHHHHHHHHhCCC
Q 018900          252 RKRPVP--IPGS------GMQFTNIAHVRDLSSMLTLAVEN----PEAASSNIFNLVSDRA--VTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       252 ~~~~~~--~~~~------~~~~~~~i~v~Dva~~~~~~~~~----~~~~~~~~~~i~~~~~--~t~~el~~~~~~~~g~~  317 (349)
                      ..+..+  +++.      +++.++++|++|+|++++.++.+    +.. .+++||+++++.  +++.|+++.+.+. |.+
T Consensus       304 ~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~-~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~  381 (478)
T 4dqv_A          304 ATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLA-GFATYHVMNPHDDGIGLDEYVDWLIEA-GYP  381 (478)
T ss_dssp             HHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCC-SEEEEEESCCCCSSCSHHHHHHHHHHT-TCS
T ss_pred             HcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCC-CCceEEecCCCCCCcCHHHHHHHHHHc-CCC
Confidence            433322  2221      25678999999999999999986    333 348999999987  9999999999995 877


Q ss_pred             ceeE
Q 018900          318 VEIV  321 (349)
Q Consensus       318 ~~~~  321 (349)
                      ++.+
T Consensus       382 ~~~i  385 (478)
T 4dqv_A          382 IRRI  385 (478)
T ss_dssp             CEEE
T ss_pred             cccC
Confidence            6654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=2e-28  Score=215.23  Aligned_cols=203  Identities=21%  Similarity=0.219  Sum_probs=153.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.+....+            ..+++++.+|   .+++.+++++
T Consensus         4 m~~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~   67 (227)
T 3dhn_A            4 VKKIVLI----GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------------NEHLKVKKADVSSLDEVCEVCKG   67 (227)
T ss_dssp             CCEEEEE----TCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------------CTTEEEECCCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------------cCceEEEEecCCCHHHHHHHhcC
Confidence            6799999    9999999999999999999999999987554322            1356677776   6778888876


Q ss_pred             CCccEEEeCCCC----------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCC----CCChHHHHH
Q 018900          151 VTFDVVLDNNGK----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEK  216 (349)
Q Consensus       151 ~~~d~Vi~~a~~----------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k~~~ek  216 (349)
                        +|+|||+++.          |+.++.+++++|++.+++|||++||.++|....+.+ .++.+..+    ..+|..+|.
T Consensus        68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~~~~~p~~~Y~~sK~~~e~  144 (227)
T 3dhn_A           68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR-LMDSGEVPENILPGVKALGEF  144 (227)
T ss_dssp             --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEE-GGGTTCSCGGGHHHHHHHHHH
T ss_pred             --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCc-cccCCcchHHHHHHHHHHHHH
Confidence              5999999985          578999999999999999999999998776543322 22222222    245666673


Q ss_pred             HH---H-hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCE
Q 018900          217 YI---S-ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (349)
Q Consensus       217 ~~---~-~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  292 (349)
                      ++   . +.+++++++||+++||++.....+       ..+....+.. ++. ++++|++|+|++++.+++++...+ ++
T Consensus       145 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~-------~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g-~~  214 (227)
T 3dhn_A          145 YLNFLMKEKEIDWVFFSPAADMRPGVRTGRY-------RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQ-ER  214 (227)
T ss_dssp             HHHTGGGCCSSEEEEEECCSEEESCCCCCCC-------EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCS-EE
T ss_pred             HHHHHhhccCccEEEEeCCcccCCCccccce-------eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccC-cE
Confidence            33   2 458999999999999998654321       1233333332 222 799999999999999999988655 99


Q ss_pred             EEeeCCCccCHHH
Q 018900          293 FNLVSDRAVTLDG  305 (349)
Q Consensus       293 ~~i~~~~~~t~~e  305 (349)
                      |+++++++.++++
T Consensus       215 ~~~~~~~~~~~~~  227 (227)
T 3dhn_A          215 FTIGYLEHHHHHH  227 (227)
T ss_dssp             EEEECCSCCC---
T ss_pred             EEEEeehhcccCC
Confidence            9999999988864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.96  E-value=7.7e-29  Score=230.87  Aligned_cols=255  Identities=20%  Similarity=0.180  Sum_probs=172.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~  148 (349)
                      |+|+||||    ||+||||++|+++|+++||+|++++|+.+...+..     .+..+ ...+++++.+|   .+++.+++
T Consensus         8 ~~~~vlVT----GatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (338)
T 2rh8_A            8 GKKTACVV----GGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-----HLLELQELGDLKIFRADLTDELSFEAPI   78 (338)
T ss_dssp             -CCEEEEE----CTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-----HHHHHGGGSCEEEEECCTTTSSSSHHHH
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-----HHHhcCCCCcEEEEecCCCChHHHHHHH
Confidence            57899999    99999999999999999999999999764332110     00111 12356677777   56677788


Q ss_pred             cCCCccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CcEEEEecccc-ccCCC---CCCCCCCCCCC---
Q 018900          149 GGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAG-IYKPA---DEPPHVEGDVV---  205 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~-vy~~~---~~~~~~e~~~~---  205 (349)
                      +++  |+|||+|+.               |+.++.+++++|++.+ ++||||+||.+ +|+..   ...+++|+.+.   
T Consensus        79 ~~~--D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  156 (338)
T 2rh8_A           79 AGC--DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE  156 (338)
T ss_dssp             TTC--SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-
T ss_pred             cCC--CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchh
Confidence            764  999999872               4578999999999986 99999999987 44321   11256665421   


Q ss_pred             ----------CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHH--HHHHHHhCCCcccCCCC------C
Q 018900          206 ----------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSG------M  263 (349)
Q Consensus       206 ----------~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~  263 (349)
                                .+..+|..+|+++.+    ++++++++||+++|||+........  .+.....+.+. .++..      .
T Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~  235 (338)
T 2rh8_A          157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLS  235 (338)
T ss_dssp             ------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHH
T ss_pred             hccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-cccccccccccc
Confidence                      356788888887754    4899999999999999865432111  11122344332 11111      1


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC-CceeEEcC--CC-ccCCCcc--ccCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYD--PK-AAGIDAK--KAFP  337 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~-~~~~~~~~--~~-~~~~~~~--k~~g  337 (349)
                      ..++|+|++|+|++++.+++++..  ++.|+++++ .+++.|+++.+.+.++. +++....+  .. ....+..  +.+|
T Consensus       236 ~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~~~-~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG  312 (338)
T 2rh8_A          236 GSVSIAHVEDVCRAHIFVAEKESA--SGRYICCAA-NTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISSEKLVKEG  312 (338)
T ss_dssp             SSEEEEEHHHHHHHHHHHHHCTTC--CEEEEECSE-EECHHHHHHHHHHHCTTSCCCCCCTTSCSSCSCCCCCHHHHHHT
T ss_pred             CcccEEEHHHHHHHHHHHHcCCCc--CCcEEEecC-CCCHHHHHHHHHHhCCCCCCCCCCCCCCcCcceeechHHHHHhC
Confidence            124899999999999999987544  257888765 59999999999998863 32211111  10 1223333  3499


Q ss_pred             Cccce
Q 018900          338 FRNMV  342 (349)
Q Consensus       338 ~~p~~  342 (349)
                      |+|++
T Consensus       313 ~~p~~  317 (338)
T 2rh8_A          313 FSFKY  317 (338)
T ss_dssp             CCCSC
T ss_pred             CCCCC
Confidence            99985

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.96  E-value=2.9e-28  Score=226.89  Aligned_cols=232  Identities=13%  Similarity=0.068  Sum_probs=173.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D---~~~l~~~~  148 (349)
                      ++|+||||    ||+||||++++++|+++|++|++++|+.+....+..    .+......+++++ .+|   .+++.+++
T Consensus        10 ~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~   81 (342)
T 1y1p_A           10 EGSLVLVT----GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK----RWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHH----HhhccCCCceEEEEecCCcChHHHHHHH
Confidence            56899999    999999999999999999999999997643221100    0000001345566 566   56666777


Q ss_pred             cCCCccEEEeCCCC-------------ChhhHHHHHHHHHh-CCCcEEEEeccccccCCCC----CCCCCCCCCC-----
Q 018900          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKS-SGVKQFLFISSAGIYKPAD----EPPHVEGDVV-----  205 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~-~gv~~~i~~Ss~~vy~~~~----~~~~~e~~~~-----  205 (349)
                      ++  +|+|||+|+.             |+.++.+++++|++ .+++|||++||.++|+...    +.+++|+++.     
T Consensus        82 ~~--~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  159 (342)
T 1y1p_A           82 KG--AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             TT--CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             cC--CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhh
Confidence            64  6999999983             46789999999984 6789999999999986432    1466776521     


Q ss_pred             ---------------CCCCChHHHHHHHHhh------CCcEEEEecCceeeCCCCCC----chHHHHHHHHhCCCcccCC
Q 018900          206 ---------------KPDAGHVQVEKYISEN------FSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       206 ---------------~~~~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~  260 (349)
                                     .+..+|..+|+++.++      +++++++||+++||+.....    .+..++..+..+.+..+++
T Consensus       160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (342)
T 1y1p_A          160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA  239 (342)
T ss_dssp             HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred             hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccc
Confidence                           1234577777776543      68899999999999976542    5677888888888877666


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                      ++ +.++|+|++|+|++++.+++++...+ +.+ +++++.+++.|+++.+.+.+|.+
T Consensus       240 ~~-~~~~~v~v~Dva~a~~~~~~~~~~~g-~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          240 LM-PPQYYVSAVDIGLLHLGCLVLPQIER-RRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             TC-CSEEEEEHHHHHHHHHHHHHCTTCCS-CEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             cC-CcCCEeEHHHHHHHHHHHHcCcccCC-ceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence            55 67899999999999999998764333 444 45566799999999999999974

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.95  E-value=8.8e-29  Score=226.77  Aligned_cols=228  Identities=19%  Similarity=0.193  Sum_probs=174.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +|+||||    ||||++|++++++|+++| ++|++++|+++...         ...+...+++++.+|   ++++.++++
T Consensus         5 ~~~ilVt----GatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~---------~~~l~~~~~~~~~~D~~d~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVF----GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA---------AKELRLQGAEVVQGDQDDQVIMELALN   71 (299)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH---------HHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH---------HHHHHHCCCEEEEecCCCHHHHHHHHh
Confidence            5789999    999999999999999998 99999999865321         012233577788887   677888887


Q ss_pred             CCCccEEEeCCCC--------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhh
Q 018900          150 GVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~  221 (349)
                      +.  |+|||+++.        ++.++++++++|++.|++|||++|+.++|+...+.+     ...+..+|..+|+++++.
T Consensus        72 ~~--d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~-----~~~y~~sK~~~e~~~~~~  144 (299)
T 2wm3_A           72 GA--YATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRL-----AAAHFDGKGEVEEYFRDI  144 (299)
T ss_dssp             TC--SEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSC-----CCHHHHHHHHHHHHHHHH
T ss_pred             cC--CEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcc-----cCchhhHHHHHHHHHHHC
Confidence            75  999999983        356889999999999999999999988886432211     111234688899999999


Q ss_pred             CCcEEEEecCceeeCCCCCCchHHHHHHHH-hCCCc-ccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          222 FSNWASFRPQYMIGSGNNKDCEEWFFDRIV-RKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       222 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      +++++++||+++||+....     ++.... .+... .....++..++++|++|+|++++.+++++....|++|++++ +
T Consensus       145 gi~~~ilrp~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~  218 (299)
T 2wm3_A          145 GVPMTSVRLPCYFENLLSH-----FLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-C  218 (299)
T ss_dssp             TCCEEEEECCEEGGGGGTT-----TCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-E
T ss_pred             CCCEEEEeecHHhhhchhh-----cCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-c
Confidence            9999999999999974321     111111 23221 11223667889999999999999999986433458999987 5


Q ss_pred             ccCHHHHHHHHHHHhCCCceeEEcCCCc
Q 018900          300 AVTLDGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       300 ~~t~~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      .+|+.|+++.+.+.+|+++.+..+|...
T Consensus       219 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~  246 (299)
T 2wm3_A          219 RHTAEEYAALLTKHTRKVVHDAKMTPED  246 (299)
T ss_dssp             EECHHHHHHHHHHHHSSCEEECCCCTHH
T ss_pred             cCCHHHHHHHHHHHHCCCceeEecCHHH
Confidence            7999999999999999998887776554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.95  E-value=2.6e-28  Score=234.78  Aligned_cols=234  Identities=13%  Similarity=0.173  Sum_probs=175.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc---CCCCCCCc----ccceecCCCeEEEcChhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNR----FNEIVSAGGKTVWGDPAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~---~~~~~~~~----~~~l~~~~~~~~~~D~~~l  144 (349)
                      ..+|+||||    ||+||||++|+++|+++|++|++++|+.+....   +.......    +.+....+++++.+|..+.
T Consensus        67 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           67 RPLGNTLLT----GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             CCCEEEEEE----CTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             CCCCEEEEe----cCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            457899999    999999999999999999999999998752110   00000000    0111235788888885432


Q ss_pred             HhhhcCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCCCcEEEEeccccccCC-----CCCCCCCCCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEGDVVK  206 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~-----~~~~~~~e~~~~~  206 (349)
                      +.+-...++|+|||+|+.             |+.++.+++++|++ ++++|||+||.++ |.     ....++.|+++..
T Consensus       143 ~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~  220 (427)
T 4f6c_A          143 DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  220 (427)
T ss_dssp             CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS
T ss_pred             ccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccccc
Confidence            222222347999999983             67889999999999 8899999999988 43     2345677776522


Q ss_pred             ---C----CCChHHHHHHHHh---hCCcEEEEecCceeeCCCCCC--------chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          207 ---P----DAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       207 ---~----~~~k~~~ek~~~~---~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                         +    ..+|+.+|+++++   .|++++++||++|||+.....        .+..++..+..+.+++. +.++..++|
T Consensus       221 ~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  299 (427)
T 4f6c_A          221 GQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDF  299 (427)
T ss_dssp             SCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEE
Confidence               1    2457777887776   599999999999999987543        35667777777777665 345778999


Q ss_pred             eeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      ++++|+|++++.++.++.  .+++||+++++.+++.|+++.+++ +|
T Consensus       300 v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          300 SFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             EEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             eeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            999999999999999877  358999999999999999999998 66

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=3.8e-28  Score=223.67  Aligned_cols=234  Identities=15%  Similarity=0.174  Sum_probs=173.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      +|+||||    ||||++|++++++|+++|++|++++|+........   ...+..+...+++++.+|   ++++.+++++
T Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~   76 (313)
T 1qyd_A            4 KSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK---VQMLLYFKQLGAKLIEASLDDHQRLVDALKQ   76 (313)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH---HHHHHHHHTTTCEEECCCSSCHHHHHHHHTT
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH---HHHHHHHHhCCeEEEeCCCCCHHHHHHHHhC
Confidence            5789999    99999999999999999999999999864210000   000111223577788777   6778888877


Q ss_pred             CCccEEEeCCCC-----ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCCCC--CCCCCChHHHHHHHHhhC
Q 018900          151 VTFDVVLDNNGK-----NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDV--VKPDAGHVQVEKYISENF  222 (349)
Q Consensus       151 ~~~d~Vi~~a~~-----~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~~--~~~~~~k~~~ek~~~~~~  222 (349)
                      .  |+|||+++.     ++.++++++++|++.| ++|||+ |   +||.....+..+..+  ..+ .+|..+|+++++.+
T Consensus        77 ~--d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g  149 (313)
T 1qyd_A           77 V--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAAS  149 (313)
T ss_dssp             C--SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTT
T ss_pred             C--CEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCccccccCCCCCcchH-HHHHHHHHHHHhcC
Confidence            4  999999984     6889999999999999 999995 4   455322211000011  112 46888999999999


Q ss_pred             CcEEEEecCceeeCCCCCCchHHHHHH----HHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          223 SNWASFRPQYMIGSGNNKDCEEWFFDR----IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      ++++++||+.++++....     +...    ...++.+.++++++..+++++++|+|++++.+++++...+ ++|++.++
T Consensus       150 ~~~~ilrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~~~g~  223 (313)
T 1qyd_A          150 IPYTYVSSNMFAGYFAGS-----LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLN-KTMYIRPP  223 (313)
T ss_dssp             CCBCEEECCEEHHHHTTT-----SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSS-SEEECCCG
T ss_pred             CCeEEEEeceeccccccc-----cccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCC-ceEEEeCC
Confidence            999999999988753221     1111    1234455677888889999999999999999999876544 78888764


Q ss_pred             -CccCHHHHHHHHHHHhCCCceeEEcCCCc
Q 018900          299 -RAVTLDGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       299 -~~~t~~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                       +.+|+.|+++.+.+.+|.++++.++|.+.
T Consensus       224 ~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  253 (313)
T 1qyd_A          224 MNILSQKEVIQIWERLSEQNLDKIYISSQD  253 (313)
T ss_dssp             GGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred             CCccCHHHHHHHHHHhcCCCCceEECCHHH
Confidence             78999999999999999999888777543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=8.3e-28  Score=212.85  Aligned_cols=203  Identities=18%  Similarity=0.292  Sum_probs=158.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCC-eEEEcCh-hhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDP-AEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~-~~l~~~~~  149 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...           ++...++ +++.+|. +++.+.+.
T Consensus        19 l~~~~ilVt----GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~-----------~~~~~~~~~~~~~Dl~~~~~~~~~   83 (236)
T 3e8x_A           19 FQGMRVLVV----GANGKVARYLLSELKNKGHEPVAMVRNEEQGP-----------ELRERGASDIVVANLEEDFSHAFA   83 (236)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-----------HHHHTTCSEEEECCTTSCCGGGGT
T ss_pred             cCCCeEEEE----CCCChHHHHHHHHHHhCCCeEEEEECChHHHH-----------HHHhCCCceEEEcccHHHHHHHHc
Confidence            457899999    99999999999999999999999999875442           2333477 8888886 56666666


Q ss_pred             CCCccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 018900          150 GVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (349)
Q Consensus       150 ~~~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~  217 (349)
                      +  +|+|||+++.            |+.++.+++++|++.+++|||++||.+.+..... +   .....+..+|..+|++
T Consensus        84 ~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~-~---~~~~~Y~~sK~~~e~~  157 (236)
T 3e8x_A           84 S--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQG-P---MNMRHYLVAKRLADDE  157 (236)
T ss_dssp             T--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGS-C---GGGHHHHHHHHHHHHH
T ss_pred             C--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCC-h---hhhhhHHHHHHHHHHH
Confidence            5  5999999993            7888999999999999999999999665433110 0   1111233578889999


Q ss_pred             HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          218 ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       218 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                      +++.+++++++||++++|+.....              +.....+....++++++|+|++++.+++++... |++|++++
T Consensus       158 ~~~~gi~~~~lrpg~v~~~~~~~~--------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~v~~  222 (236)
T 3e8x_A          158 LKRSSLDYTIVRPGPLSNEESTGK--------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTI-GKTFEVLN  222 (236)
T ss_dssp             HHHSSSEEEEEEECSEECSCCCSE--------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGT-TEEEEEEE
T ss_pred             HHHCCCCEEEEeCCcccCCCCCCe--------------EEeccCCCcccCcEeHHHHHHHHHHHhcCcccc-CCeEEEeC
Confidence            999999999999999999865332              122223444678999999999999999988643 48999999


Q ss_pred             CCccCHHHHHHHHH
Q 018900          298 DRAVTLDGMAKLCA  311 (349)
Q Consensus       298 ~~~~t~~el~~~~~  311 (349)
                      ++ +++.|+++.++
T Consensus       223 ~~-~~~~e~~~~i~  235 (236)
T 3e8x_A          223 GD-TPIAKVVEQLG  235 (236)
T ss_dssp             CS-EEHHHHHHTC-
T ss_pred             CC-cCHHHHHHHhc
Confidence            85 99999998765

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.95  E-value=8.5e-28  Score=236.30  Aligned_cols=233  Identities=13%  Similarity=0.171  Sum_probs=174.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCC---CCCCC----cccceecCCCeEEEcChhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK---KPPFN----RFNEIVSAGGKTVWGDPAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~---~~~~~----~~~~l~~~~~~~~~~D~~~l~  145 (349)
                      .+|+||||    |||||||++|+++|+++|++|++++|+........   .....    .+......+++++.+|..+.+
T Consensus       149 ~~~~VLVT----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  224 (508)
T 4f6l_B          149 PLGNTLLT----GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  224 (508)
T ss_dssp             CCEEEEES----CTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS
T ss_pred             CCCeEEEE----CCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc
Confidence            46899999    99999999999999999999999999875211000   00000    001122357888888843322


Q ss_pred             hhhcCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCCCcEEEEeccccccCC-----CCCCCCCCCCCCC-
Q 018900          146 NVVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEGDVVK-  206 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~-----~~~~~~~e~~~~~-  206 (349)
                      .+-...++|+|||+|+.             |+.++.+++++|++ +.++|||+||.++ |.     ..+.++.|+++.. 
T Consensus       225 ~l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~  302 (508)
T 4f6l_B          225 DVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG  302 (508)
T ss_dssp             SCCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSS
T ss_pred             cCCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccccccccc
Confidence            22122347999999983             78899999999998 7789999999998 43     2345677776521 


Q ss_pred             ------CCCChHHHHHHHHh---hCCcEEEEecCceeeCCCCCC--------chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          207 ------PDAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       207 ------~~~~k~~~ek~~~~---~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            +..+|+.+|+++.+   .|++++|+||++|||+.....        .+..++..+...+.++. +.+++.++|+
T Consensus       303 ~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v  381 (508)
T 4f6l_B          303 QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFS  381 (508)
T ss_dssp             BCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECE
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEE
Confidence                  22467778887776   589999999999999976543        25566777777766654 3467889999


Q ss_pred             eHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHh
Q 018900          270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~  314 (349)
                      |++|+|++++.++.++.  .+++||+++++.+++.|+++.+++..
T Consensus       382 ~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          382 FVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             EHHHHHHHHHHHTTBCC--SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             cHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            99999999999999877  35899999999999999999999754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.95  E-value=1.8e-27  Score=219.83  Aligned_cols=225  Identities=19%  Similarity=0.210  Sum_probs=155.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      +|+||||    ||+||||++++++|+++||+|++++| +.+...+..     ...++.  ..+++++.+|   .+++.++
T Consensus         1 ~k~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   71 (322)
T 2p4h_X            1 KGRVCVT----GGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-----FLTNLPGASEKLHFFNADLSNPDSFAAA   71 (322)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-----HHHTSTTHHHHEEECCCCTTCGGGGHHH
T ss_pred             CCEEEEE----CChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-----HHHhhhccCCceEEEecCCCCHHHHHHH
Confidence            4789999    99999999999999999999999998 543211100     000110  1134455555   6778888


Q ss_pred             hcCCCccEEEeCCCC---------------ChhhHHHHHHHHHhC-CCcEEEEeccccc-cCCCC-CCCCCCCCCC----
Q 018900          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSS-GVKQFLFISSAGI-YKPAD-EPPHVEGDVV----  205 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~v-y~~~~-~~~~~e~~~~----  205 (349)
                      ++++  |+|||+|+.               |+.++.+++++|++. +++|||++||..+ |+... ..+++|+.+.    
T Consensus        72 ~~~~--d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~  149 (322)
T 2p4h_X           72 IEGC--VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDL  149 (322)
T ss_dssp             HTTC--SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred             HcCC--CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhh
Confidence            8765  999999862               457899999999988 7899999999874 44322 2345665421    


Q ss_pred             ---------CCCCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHH--HHHHHHhCCCcccCCCCCcceeeee
Q 018900          206 ---------KPDAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       206 ---------~~~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                               .+..+|..+|+++.+    ++++++++||+++|||+........  .+.....+.+..+ +.  ...+++|
T Consensus       150 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~  226 (322)
T 2p4h_X          150 LRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVH  226 (322)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEE
T ss_pred             hcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEE
Confidence                     133456666666543    4899999999999999765432111  1122344544332 22  3348999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhC
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  315 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g  315 (349)
                      ++|+|++++.+++++.. . +.|| ++++.+++.|+++.+.+.++
T Consensus       227 v~Dva~a~~~~~~~~~~-~-g~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          227 VDDVARAHIYLLENSVP-G-GRYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHHHHHHHHHHSCCC-C-EEEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHhhCcCC-C-CCEE-EcCCCCCHHHHHHHHHHhCC
Confidence            99999999999987553 3 3588 56778999999999999875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=1.6e-27  Score=220.34  Aligned_cols=227  Identities=17%  Similarity=0.206  Sum_probs=174.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+++||||    ||||++|++++++|+++|++|++++|+.....+       .+.++...+++++.+|   ++++.++++
T Consensus        10 m~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~l~~~~v~~v~~Dl~d~~~l~~a~~   78 (318)
T 2r6j_A           10 MKSKILIF----GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTT-------LLDEFQSLGAIIVKGELDEHEKLVELMK   78 (318)
T ss_dssp             CCCCEEEE----TTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHH-------HHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCeEEEE----CCCchHHHHHHHHHHHCCCcEEEEECCCCchhh-------HHHHhhcCCCEEEEecCCCHHHHHHHHc
Confidence            45689999    999999999999999999999999998741110       1112334578888887   577888888


Q ss_pred             CCCccEEEeCCCCC-hhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCCCCC-----CCCCChHHHHHHHHhhC
Q 018900          150 GVTFDVVLDNNGKN-LDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVV-----KPDAGHVQVEKYISENF  222 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~-~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~~~-----~~~~~k~~~ek~~~~~~  222 (349)
                      +.  |+|||+++.. +.++++++++|++.| ++|||+ |   +||...    .|..+.     .+ .+|..+|+++++.+
T Consensus        79 ~~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~sK~~~e~~~~~~~  147 (318)
T 2r6j_A           79 KV--DVVISALAFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALI-ERKRMIRRAIEEAN  147 (318)
T ss_dssp             TC--SEEEECCCGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHH-HHHHHHHHHHHHTT
T ss_pred             CC--CEEEECCchhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhH-HHHHHHHHHHHhcC
Confidence            74  9999999853 788999999999998 999985 4   455321    111111     12 46888999999999


Q ss_pred             CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC-CCcc
Q 018900          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAV  301 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~-~~~~  301 (349)
                      ++++++||+.+++.     ++..++.....++.+.++++++..+++++++|+|++++.+++++...+ ++|++.+ ++.+
T Consensus       148 ~~~~~lr~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~~~g~~~~~  221 (318)
T 2r6j_A          148 IPYTYVSANCFASY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALN-RVVIYRPSTNII  221 (318)
T ss_dssp             CCBEEEECCEEHHH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTT-EEEECCCGGGEE
T ss_pred             CCeEEEEcceehhh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccC-eEEEecCCCCcc
Confidence            99999999887763     122222222345556677888889999999999999999999876544 7788765 5789


Q ss_pred             CHHHHHHHHHHHhCCCceeEEcCCCc
Q 018900          302 TLDGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       302 t~~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      |+.|+++.+.+.+|.++++..++...
T Consensus       222 s~~e~~~~~~~~~g~~~~~~~~~~~~  247 (318)
T 2r6j_A          222 TQLELISRWEKKIGKKFKKIHVPEEE  247 (318)
T ss_dssp             EHHHHHHHHHHHHTCCCEEEEECHHH
T ss_pred             CHHHHHHHHHHHhCCCCceeecCHHH
Confidence            99999999999999999988876553

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.95  E-value=2.4e-27  Score=207.48  Aligned_cols=193  Identities=15%  Similarity=0.219  Sum_probs=154.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC----hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~l~~~~~~  150 (349)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+.....             .+++++.+|    .+++.+++++
T Consensus         1 M~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~   63 (219)
T 3dqp_A            1 MKIFIV----GSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------------NNVKAVHFDVDWTPEEMAKQLHG   63 (219)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------------TTEEEEECCTTSCHHHHHTTTTT
T ss_pred             CeEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------------CCceEEEecccCCHHHHHHHHcC
Confidence            489999    9999999999999999999999999987544321             366777777    4456777765


Q ss_pred             CCccEEEeCCCC--------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC----CCCCChHHHHHHH
Q 018900          151 VTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEKYI  218 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~----~~~~~k~~~ek~~  218 (349)
                        +|+|||+++.        |+.++.+++++|++.++++||++||.++|+..   ++.| .+.    .+..+|..+|+++
T Consensus        64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~  137 (219)
T 3dqp_A           64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYL  137 (219)
T ss_dssp             --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHH
T ss_pred             --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHH
Confidence              5999999993        78899999999999999999999998776542   3333 211    1235788899999


Q ss_pred             -HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          219 -SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       219 -~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                       ++.+++++++||+++||+.....+.               .  ++..+++++++|+|++++.+++++... +++||+++
T Consensus       138 ~~~~~i~~~ilrp~~v~g~~~~~~~~---------------~--~~~~~~~i~~~Dva~~i~~~l~~~~~~-g~~~~i~~  199 (219)
T 3dqp_A          138 TKETNLDYTIIQPGALTEEEATGLID---------------I--NDEVSASNTIGDVADTIKELVMTDHSI-GKVISMHN  199 (219)
T ss_dssp             HHSCCCEEEEEEECSEECSCCCSEEE---------------E--SSSCCCCEEHHHHHHHHHHHHTCGGGT-TEEEEEEE
T ss_pred             HhccCCcEEEEeCceEecCCCCCccc---------------c--CCCcCCcccHHHHHHHHHHHHhCcccc-CcEEEeCC
Confidence             7789999999999999986543211               1  245678999999999999999987654 48999998


Q ss_pred             CCccCHHHHHHH
Q 018900          298 DRAVTLDGMAKL  309 (349)
Q Consensus       298 ~~~~t~~el~~~  309 (349)
                      ++ .++.|+++.
T Consensus       200 g~-~~~~e~~~~  210 (219)
T 3dqp_A          200 GK-TAIKEALES  210 (219)
T ss_dssp             CS-EEHHHHHHT
T ss_pred             CC-ccHHHHHHH
Confidence            86 899998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.95  E-value=2.1e-27  Score=221.10  Aligned_cols=254  Identities=16%  Similarity=0.156  Sum_probs=167.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+||||++++++|+++||+|++++|+.+...+..     .+.++.  ..+++++.+|   .+++.++
T Consensus         4 ~~~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   74 (337)
T 2c29_D            4 QSETVCVT----GASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-----HLLDLPKAETHLTLWKADLADEGSFDEA   74 (337)
T ss_dssp             --CEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-----HHHTSTTHHHHEEEEECCTTSTTTTHHH
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-----HHHhcccCCCeEEEEEcCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999865321100     000010  1245667776   5667888


Q ss_pred             hcCCCccEEEeCCCC---------------ChhhHHHHHHHHHhCC-CcEEEEecccc-ccCCCC-CCCCCCCCCCC---
Q 018900          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-VKQFLFISSAG-IYKPAD-EPPHVEGDVVK---  206 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~---------------~~~~~~~ll~~a~~~g-v~~~i~~Ss~~-vy~~~~-~~~~~e~~~~~---  206 (349)
                      +++.  |+|||+|+.               |+.++.+++++|++.+ ++||||+||.+ +|+... ..+++|+.+..   
T Consensus        75 ~~~~--d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~  152 (337)
T 2c29_D           75 IKGC--TGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEF  152 (337)
T ss_dssp             HTTC--SEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred             HcCC--CEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhh
Confidence            8764  999999872               4567899999999887 89999999987 555432 23455654211   


Q ss_pred             ----------CCCChHHHHHHHH----hhCCcEEEEecCceeeCCCCCCchHHHHHH--HHhCCCcccCCCCCcceeeee
Q 018900          207 ----------PDAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDR--IVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       207 ----------~~~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~  270 (349)
                                |..+|..+|+++.    +++++++++||+++|||+....+...+...  ...+.+. .++.+. ...|+|
T Consensus       153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~i~  230 (337)
T 2c29_D          153 CRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSIIR-QGQFVH  230 (337)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHHT-EEEEEE
T ss_pred             hcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-cccccC-CCCEEE
Confidence                      2245666666553    348999999999999998654422222111  1334332 222111 245999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC-CceeEEcC----CCccCCCcc--ccCCCccce
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYD----PKAAGIDAK--KAFPFRNMV  342 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~-~~~~~~~~----~~~~~~~~~--k~~g~~p~~  342 (349)
                      ++|+|++++.+++++.. + +.|++++ ..+++.|+++.+.+.++. +++....+    ......+..  +.+||+|++
T Consensus       231 v~Dva~a~~~~~~~~~~-~-~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  306 (337)
T 2c29_D          231 LDDLCNAHIYLFENPKA-E-GRYICSS-HDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKY  306 (337)
T ss_dssp             HHHHHHHHHHHHHCTTC-C-EEEEECC-EEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCC
T ss_pred             HHHHHHHHHHHhcCccc-C-ceEEEeC-CCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCC
Confidence            99999999999987544 2 4776655 458999999999998842 33221111    011112223  459999975

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.94  E-value=9.3e-27  Score=218.50  Aligned_cols=230  Identities=15%  Similarity=0.117  Sum_probs=171.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC----hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD----PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D----~~~l~~~~  148 (349)
                      +|+||||    ||||+||++++++|+++|++|++++|+.+....         ..+.. .+++++.+|    ++++.+++
T Consensus         5 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~l~~~~~v~~v~~D~l~d~~~l~~~~   71 (352)
T 1xgk_A            5 KKTIAVV----GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA---------EELQAIPNVTLFQGPLLNNVPLMDTLF   71 (352)
T ss_dssp             CCCEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH---------HHHHTSTTEEEEESCCTTCHHHHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH---------HHHhhcCCcEEEECCccCCHHHHHHHH
Confidence            5789999    999999999999999999999999998754310         01111 256666666    46678888


Q ss_pred             cCCCccEEEeCCCCC----hhhHHHHHHHHHhCC-CcEEEEecccc--ccCCCCCCCCCCCCCCCCCCChHHHHHHHHhh
Q 018900          149 GGVTFDVVLDNNGKN----LDAVRPVADWAKSSG-VKQFLFISSAG--IYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~----~~~~~~ll~~a~~~g-v~~~i~~Ss~~--vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~  221 (349)
                      ++.  |+|||+++..    ....++++++|++.| ++||||+||.+  .|+..        ....+..+|..+|+++++.
T Consensus        72 ~~~--d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~--------~~~~y~~sK~~~E~~~~~~  141 (352)
T 1xgk_A           72 EGA--HLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW--------PAVPMWAPKFTVENYVRQL  141 (352)
T ss_dssp             TTC--SEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC--------CCCTTTHHHHHHHHHHHTS
T ss_pred             hcC--CEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCC--------CCccHHHHHHHHHHHHHHc
Confidence            775  9999988742    233499999999999 99999999975  45431        1123446899999999999


Q ss_pred             CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc--ccCCCCCcceeeeeH-HHHHHHHHHHhcCCC-ccCCCEEEeeC
Q 018900          222 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV--PIPGSGMQFTNIAHV-RDLSSMLTLAVENPE-AASSNIFNLVS  297 (349)
Q Consensus       222 ~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v-~Dva~~~~~~~~~~~-~~~~~~~~i~~  297 (349)
                      +++++++||+ +||++........+.......+.+  .+++++++.++++|+ +|+|++++.+++++. ...+++||+++
T Consensus       142 gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~  220 (352)
T 1xgk_A          142 GLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF  220 (352)
T ss_dssp             SSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS
T ss_pred             CCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec
Confidence            9999999976 688765432111000011122332  346777888999999 899999999998753 22358999996


Q ss_pred             CCccCHHHHHHHHHHHhCCCceeEEcCCCcc
Q 018900          298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA  328 (349)
Q Consensus       298 ~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~  328 (349)
                       +.+|+.|+++.+.+.+|.++++..+|....
T Consensus       221 -~~~s~~e~~~~i~~~~G~~~~~~~vp~~~~  250 (352)
T 1xgk_A          221 -ETLSPVQVCAAFSRALNRRVTYVQVPKVEI  250 (352)
T ss_dssp             -EEECHHHHHHHHHHHHTSCEEEEECSSCCC
T ss_pred             -CCCCHHHHHHHHHHHHCCCCceEECCHHHH
Confidence             569999999999999999999888885544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=9.9e-27  Score=217.66  Aligned_cols=213  Identities=15%  Similarity=0.227  Sum_probs=169.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++ |+ +|++++|++.....+.       .++...+++++.+|   .+.+.++
T Consensus        20 ~~k~vlVT----GatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-------~~~~~~~v~~~~~Dl~d~~~l~~~   88 (344)
T 2gn4_A           20 DNQTILIT----GGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-------MEFNDPRMRFFIGDVRDLERLNYA   88 (344)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-------HHHCCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-------HHhcCCCEEEEECCCCCHHHHHHH
Confidence            46899999    99999999999999999 97 9999999764332110       11122467777777   5677778


Q ss_pred             hcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCCh
Q 018900          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k  211 (349)
                      +++  +|+|||+|+.                |+.++.+++++|++.++++||++||...+.+.          ..+..+|
T Consensus        89 ~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~----------~~Y~~sK  156 (344)
T 2gn4_A           89 LEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPI----------NLYGATK  156 (344)
T ss_dssp             TTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCC----------SHHHHHH
T ss_pred             Hhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCc----------cHHHHHH
Confidence            875  5999999983                56788999999999999999999997765321          1234578


Q ss_pred             HHHHHHHHhh-------CCcEEEEecCceeeCCCCCCchHHHHHHHHhCC-CcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          212 VQVEKYISEN-------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       212 ~~~ek~~~~~-------~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      ..+|+++...       +++++++||+++||++.  ..++.++..+..++ ++++. +++..++|+|++|+|++++.+++
T Consensus       157 ~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~  233 (344)
T 2gn4_A          157 LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLK  233 (344)
T ss_dssp             HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHh
Confidence            8888887653       68999999999999874  35677777888887 77765 57778899999999999999998


Q ss_pred             CCCccCCCEEEeeCCCccCHHHHHHHHHHHh
Q 018900          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~  314 (349)
                      ++.  .|++|++.++ .+++.|+++.+.+.+
T Consensus       234 ~~~--~g~~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          234 RMH--GGEIFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             HCC--SSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred             hcc--CCCEEecCCC-cEEHHHHHHHHHHhC
Confidence            764  3589999877 599999999998754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=9.2e-27  Score=213.82  Aligned_cols=233  Identities=15%  Similarity=0.152  Sum_probs=172.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +||+||||    ||||++|++++++|+++|++|++++|+........ .......++...+++++.+|   ++++.++++
T Consensus         1 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~   75 (307)
T 2gas_A            1 TENKILIL----GPTGAIGRHIVWASIKAGNPTYALVRKTITAANPE-TKEELIDNYQSLGVILLEGDINDHETLVKAIK   75 (307)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHH-HHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHhCCCcEEEEECCCcccCChH-HHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh
Confidence            36789999    99999999999999999999999999861100000 00001112234578888887   577888887


Q ss_pred             CCCccEEEeCCCC-ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCCCCC-----CCCCChHHHHHHHHhhC
Q 018900          150 GVTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVV-----KPDAGHVQVEKYISENF  222 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~~~-----~~~~~k~~~ek~~~~~~  222 (349)
                      +  +|+|||+++. .+.++.+++++|++.| ++|||+ |   +||...    .+..+.     .+ .+|..+|+++++.+
T Consensus        76 ~--~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~sK~~~e~~~~~~~  144 (307)
T 2gas_A           76 Q--VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVF-EEKASIRRVIEAEG  144 (307)
T ss_dssp             T--CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHH-HHHHHHHHHHHHHT
T ss_pred             C--CCEEEECCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHH-HHHHHHHHHHHHcC
Confidence            6  4999999985 4788999999999998 999983 3   455321    111111     12 46888999999999


Q ss_pred             CcEEEEecCceeeCCCCCCchHHHHHH---HHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC-C
Q 018900          223 SNWASFRPQYMIGSGNNKDCEEWFFDR---IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-D  298 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~-~  298 (349)
                      ++++++||+.++++....     +...   ...++.+.++++++..+++++++|+|++++.+++++...+ ++|++.+ +
T Consensus       145 i~~~~lrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~~~~~~  218 (307)
T 2gas_A          145 VPYTYLCCHAFTGYFLRN-----LAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLN-KAVHIRLPK  218 (307)
T ss_dssp             CCBEEEECCEETTTTGGG-----TTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTT-EEEECCCGG
T ss_pred             CCeEEEEcceeecccccc-----ccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccC-ceEEEeCCC
Confidence            999999999988754211     1110   1134455667888888999999999999999999876544 7788775 4


Q ss_pred             CccCHHHHHHHHHHHhCCCceeEEcCCCc
Q 018900          299 RAVTLDGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       299 ~~~t~~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      +.+|+.|+++.+.+.+|.++++.++|.+.
T Consensus       219 ~~~s~~e~~~~~~~~~g~~~~~~~~~~~~  247 (307)
T 2gas_A          219 NYLTQNEVIALWEKKIGKTLEKTYVSEEQ  247 (307)
T ss_dssp             GEEEHHHHHHHHHHHHTSCCEEEEECHHH
T ss_pred             CcCCHHHHHHHHHHHhCCCCceeecCHHH
Confidence            68999999999999999999988877543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=4.3e-27  Score=217.61  Aligned_cols=230  Identities=16%  Similarity=0.192  Sum_probs=172.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      +||+||||    ||||++|++++++|+++|++|++++|+. ......   ....+..+...+++++.+|   ++++.+++
T Consensus         3 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~   75 (321)
T 3c1o_A            3 HMEKIIIY----GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPS---SVQLREEFRSMGVTIIEGEMEEHEKMVSVL   75 (321)
T ss_dssp             -CCCEEEE----TTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHH---HHHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             cccEEEEE----cCCchhHHHHHHHHHhCCCcEEEEECCcccccChH---HHHHHHHhhcCCcEEEEecCCCHHHHHHHH
Confidence            56789999    9999999999999999999999999986 211000   0001112234578888887   57788888


Q ss_pred             cCCCccEEEeCCCCC-hhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCCCC-----CCCCCChHHHHHHHHhh
Q 018900          149 GGVTFDVVLDNNGKN-LDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDV-----VKPDAGHVQVEKYISEN  221 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~-~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~~-----~~~~~~k~~~ek~~~~~  221 (349)
                      ++.  |+|||+++.. +.++++++++|++.| ++|||+ |   +||...    .|..+     ..+ .+|..+|+++++.
T Consensus        76 ~~~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~sK~~~e~~~~~~  144 (321)
T 3c1o_A           76 KQV--DIVISALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVL-EKKRIIRRAIEAA  144 (321)
T ss_dssp             TTC--SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHH-HHHHHHHHHHHHH
T ss_pred             cCC--CEEEECCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHH-HHHHHHHHHHHHc
Confidence            875  9999999954 688999999999999 999983 3   455321    11111     122 4688899999999


Q ss_pred             CCcEEEEecCceeeCCCCCCchHHHHH---HHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC-
Q 018900          222 FSNWASFRPQYMIGSGNNKDCEEWFFD---RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-  297 (349)
Q Consensus       222 ~~~~~ilR~~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~-  297 (349)
                      +++++++||+.++++.     ...+..   ....++.+.++++++..+++++++|+|++++.++.++...+ ++|++.+ 
T Consensus       145 ~~~~~~lrp~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g-~~~~~~g~  218 (321)
T 3c1o_A          145 ALPYTYVSANCFGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCN-RIVIYRPP  218 (321)
T ss_dssp             TCCBEEEECCEEHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTT-EEEECCCG
T ss_pred             CCCeEEEEeceecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccC-eEEEEeCC
Confidence            9999999999887742     111211   11234556677888888999999999999999999876544 7888876 


Q ss_pred             CCccCHHHHHHHHHHHhCCCceeEEcCCC
Q 018900          298 DRAVTLDGMAKLCAQAAGLPVEIVHYDPK  326 (349)
Q Consensus       298 ~~~~t~~el~~~~~~~~g~~~~~~~~~~~  326 (349)
                      ++.+|+.|+++.+.+.+|.++++..++.+
T Consensus       219 ~~~~t~~e~~~~~~~~~g~~~~~~~~~~~  247 (321)
T 3c1o_A          219 KNIISQNELISLWEAKSGLSFKKVHMPDE  247 (321)
T ss_dssp             GGEEEHHHHHHHHHHHHTSCCCEEEECHH
T ss_pred             CCcccHHHHHHHHHHHcCCcceeeeCCHH
Confidence            57899999999999999999888877643

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=3.2e-26  Score=199.97  Aligned_cols=203  Identities=15%  Similarity=0.214  Sum_probs=131.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHH-hhhcCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG-NVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~-~~~~~~~~  153 (349)
                      ||||||    ||+|+||++++++|+++|++|++++|+.+....           +. .+++++.+|..+.+ +.+.+  +
T Consensus         1 MkvlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~-~~~~~~~~D~~d~~~~~~~~--~   62 (221)
T 3ew7_A            1 MKIGII----GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-----------TH-KDINILQKDIFDLTLSDLSD--Q   62 (221)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-----------HC-SSSEEEECCGGGCCHHHHTT--C
T ss_pred             CeEEEE----cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-----------cc-CCCeEEeccccChhhhhhcC--C
Confidence            579999    999999999999999999999999998754332           11 47888888843322 55655  5


Q ss_pred             cEEEeCCCC-------ChhhHHHHHHHHHhCCCcEEEEecccccc-CCCCCCCCCCCCCCC----CCCChHHHHHH--HH
Q 018900          154 DVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVK----PDAGHVQVEKY--IS  219 (349)
Q Consensus       154 d~Vi~~a~~-------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy-~~~~~~~~~e~~~~~----~~~~k~~~ek~--~~  219 (349)
                      |+|||+++.       ++.++++++++|++.+++|||++||.++| +.....+..|+.+..    +..+|...|.+  +.
T Consensus        63 d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  142 (221)
T 3ew7_A           63 NVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK  142 (221)
T ss_dssp             SEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHH
T ss_pred             CEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999985       56889999999999999999999998654 433322344443322    33567777765  55


Q ss_pred             --hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          220 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       220 --~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                        +.+++++++||+++||++....   .+   ...+..+.+.+++   ..+++++|+|++++.+++++...+ ++||+++
T Consensus       143 ~~~~gi~~~ivrp~~v~g~~~~~~---~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g-~~~~~~~  212 (221)
T 3ew7_A          143 SHQAEFSWTYISPSAMFEPGERTG---DY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLN-EHFTVAG  212 (221)
T ss_dssp             TTTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHSCSCTT-SEEECCC
T ss_pred             hhccCccEEEEeCcceecCCCccC---ce---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccC-CEEEECC
Confidence              6799999999999999843221   11   1123334444433   368999999999999999987655 9999999


Q ss_pred             CCccCHHH
Q 018900          298 DRAVTLDG  305 (349)
Q Consensus       298 ~~~~t~~e  305 (349)
                      +...+.+|
T Consensus       213 ~~~~~~~~  220 (221)
T 3ew7_A          213 KLEHHHHH  220 (221)
T ss_dssp             --------
T ss_pred             CCcccccc
Confidence            88776654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=6.1e-27  Score=208.54  Aligned_cols=214  Identities=16%  Similarity=0.179  Sum_probs=160.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++  |++|++++|+++....+            ..+++++.+|   .+++.++
T Consensus         3 ~~~~ilVt----GasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~D~~d~~~~~~~   66 (253)
T 1xq6_A            3 NLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPA   66 (253)
T ss_dssp             SCCEEEEE----STTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----cCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------CCCeeEEEecCCCHHHHHHH
Confidence            57899999    99999999999999999  89999999986443221            2356667776   6778888


Q ss_pred             hcCCCccEEEeCCCC-----------------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGVTFDVVLDNNGK-----------------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~-----------------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +++  +|+|||+++.                             |+.++.++++++++.++++||++||.+++....  +
T Consensus        67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~--~  142 (253)
T 1xq6_A           67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--P  142 (253)
T ss_dssp             HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--G
T ss_pred             HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC--c
Confidence            876  5999999873                             245789999999999999999999988754321  1


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      ........+..+|..+|.++++.+++++++||+++||+.....       .+..+....+++.   ...+++++|+|+++
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~~Dva~~~  212 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-------ELLVGKDDELLQT---DTKTVPRADVAEVC  212 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-------CEEEESTTGGGGS---SCCEEEHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-------hhhccCCcCCcCC---CCcEEcHHHHHHHH
Confidence            1110001122368889999999999999999999999875321       0111111122221   24689999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCC---ccCHHHHHHHHHHHhCCC
Q 018900          279 TLAVENPEAASSNIFNLVSDR---AVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~---~~t~~el~~~~~~~~g~~  317 (349)
                      +.+++++.. .+++||+++++   .+++.|+++.+++.+|++
T Consensus       213 ~~~~~~~~~-~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          213 IQALLFEEA-KNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             HHHTTCGGG-TTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             HHHHcCccc-cCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            999998754 34899999864   599999999999988863

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=6e-27  Score=215.17  Aligned_cols=235  Identities=18%  Similarity=0.226  Sum_probs=173.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||||++|++++++|+++|++|++++|+........  .......+...+++++.+|   ++++.+++++
T Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~--~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~   77 (308)
T 1qyc_A            4 RSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSE--KAQLLESFKASGANIVHGSIDDHASLVEAVKN   77 (308)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHH--HHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHH--HHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence            6789999    99999999999999999999999999864220000  0000112234578888887   5778888887


Q ss_pred             CCccEEEeCCCC-ChhhHHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCCCCCCC----CCChHHHHHHHHhhCCc
Q 018900          151 VTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN  224 (349)
Q Consensus       151 ~~~d~Vi~~a~~-~~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~----~~~k~~~ek~~~~~~~~  224 (349)
                      .  |+|||+++. ++.++++++++|++.| ++|||+ |   +||...    .|..+..+    ..+|..+|+++++.+++
T Consensus        78 ~--d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~  147 (308)
T 1qyc_A           78 V--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEPAKSVFEVKAKVRRAIEAEGIP  147 (308)
T ss_dssp             C--SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCC
T ss_pred             C--CEEEECCcchhhhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCcchhHHHHHHHHHHHHHhcCCC
Confidence            5  999999995 4688999999999998 999984 4   344321    11111111    14688899999999999


Q ss_pred             EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC-CCccCH
Q 018900          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAVTL  303 (349)
Q Consensus       225 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~-~~~~t~  303 (349)
                      ++++||+.+++...... .. .......++.+.+++++++.+++++++|+|++++.+++++...+ ++|++.+ ++.+|+
T Consensus       148 ~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~~~g~~~~~s~  224 (308)
T 1qyc_A          148 YTYVSSNCFAGYFLRSL-AQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN-KTLYLRLPANTLSL  224 (308)
T ss_dssp             BEEEECCEEHHHHTTTT-TC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTT-EEEECCCGGGEEEH
T ss_pred             eEEEEeceecccccccc-cc-ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccC-eEEEEeCCCCccCH
Confidence            99999999988533210 00 00011234456777888889999999999999999999875444 7888875 478999


Q ss_pred             HHHHHHHHHHhCCCceeEEcCCCc
Q 018900          304 DGMAKLCAQAAGLPVEIVHYDPKA  327 (349)
Q Consensus       304 ~el~~~~~~~~g~~~~~~~~~~~~  327 (349)
                      .|+++.+.+.+|.++++.++|.+.
T Consensus       225 ~e~~~~~~~~~g~~~~~~~~~~~~  248 (308)
T 1qyc_A          225 NELVALWEKKIDKTLEKAYVPEEE  248 (308)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECHHH
T ss_pred             HHHHHHHHHHhCCCCceEeCCHHH
Confidence            999999999999999988877543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.92  E-value=8.7e-26  Score=203.54  Aligned_cols=202  Identities=16%  Similarity=0.104  Sum_probs=157.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |||+||||    ||+|+||++++++|+++|++|++++|+.....              ..+++++.+|   .+++.++++
T Consensus         1 M~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~   62 (267)
T 3ay3_A            1 MLNRLLVT----GAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------------EAHEEIVACDLADAQAVHDLVK   62 (267)
T ss_dssp             CEEEEEEE----STTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------------CTTEEECCCCTTCHHHHHHHHT
T ss_pred             CCceEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------------CCCccEEEccCCCHHHHHHHHc
Confidence            46899999    99999999999999999999999999864321              0234555555   677888887


Q ss_pred             CCCccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCC-CCCCCCCCCCCCCC----CChH
Q 018900          150 GVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       150 ~~~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~-~~~~~~e~~~~~~~----~~k~  212 (349)
                      +  +|+|||+++.            |+.++.++++++++.+++|||++||..+|+.. ...+++|+.+..+.    .+|.
T Consensus        63 ~--~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  140 (267)
T 3ay3_A           63 D--CDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKC  140 (267)
T ss_dssp             T--CSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred             C--CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHH
Confidence            6  5999999983            67789999999999999999999999999864 34578888776553    3566


Q ss_pred             HHHHHHHh----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCcc
Q 018900          213 QVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (349)
Q Consensus       213 ~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  288 (349)
                      .+|.+++.    .+++++++||+++|+...                      +++..++++|++|+|++++.+++++...
T Consensus       141 ~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          141 FGEDLASLYYHKFDIETLNIRIGSCFPKPK----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEECBCSSSCC----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEeceeecCCCC----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence            67776653    489999999999984210                      1223567999999999999999987543


Q ss_pred             CCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       289 ~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      . ++|++.++...++.|+.+.  +.+|.+++
T Consensus       199 ~-~~~~~~~~~~~~~~d~~~~--~~lg~~p~  226 (267)
T 3ay3_A          199 C-TVVYGASANTESWWDNDKS--AFLGWVPQ  226 (267)
T ss_dssp             E-EEEEECCSCSSCCBCCGGG--GGGCCCCC
T ss_pred             c-eeEecCCCccccccCHHHH--HHcCCCCC
Confidence            2 6899988877788787776  77776654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.92  E-value=3.2e-25  Score=194.28  Aligned_cols=201  Identities=16%  Similarity=0.163  Sum_probs=142.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHH-hhhcCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVG-NVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~-~~~~~~~~  153 (349)
                      ||||||    ||+|+||++++++|+++|++|++++|+.+...           ++...+++++.+|..+.+ +.+.+  +
T Consensus         1 MkilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~~~~D~~d~~~~~~~~--~   63 (224)
T 3h2s_A            1 MKIAVL----GATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-----------DRLGATVATLVKEPLVLTEADLDS--V   63 (224)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-----------HHTCTTSEEEECCGGGCCHHHHTT--C
T ss_pred             CEEEEE----cCCCHHHHHHHHHHHHCCCEEEEEEecccccc-----------cccCCCceEEecccccccHhhccc--C
Confidence            579999    99999999999999999999999999875433           222357888888843322 55655  5


Q ss_pred             cEEEeCCCC---------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC---CCCCCCCCCC----CCCChHHHHHH
Q 018900          154 DVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE---PPHVEGDVVK----PDAGHVQVEKY  217 (349)
Q Consensus       154 d~Vi~~a~~---------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~---~~~~e~~~~~----~~~~k~~~ek~  217 (349)
                      |+|||+++.         |+.++++++++|++.| +|||++||.+.+.....   .+..+.....    +..+|...|.+
T Consensus        64 d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~  142 (224)
T 3h2s_A           64 DAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY  142 (224)
T ss_dssp             SEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH
T ss_pred             CEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH
Confidence            999999997         7889999999999999 99999999865443222   1333333221    12345666543


Q ss_pred             ---HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEE
Q 018900          218 ---ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (349)
Q Consensus       218 ---~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~  294 (349)
                         .++.+++++++||+++||++....+.       .....+..   +....++++++|+|++++.+++++...+ ++|+
T Consensus       143 ~~~~~~~~i~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g-~~~~  211 (224)
T 3h2s_A          143 QFLQMNANVNWIGISPSEAFPSGPATSYV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIR-DRIV  211 (224)
T ss_dssp             HHHTTCTTSCEEEEEECSBCCCCCCCCEE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTT-SEEE
T ss_pred             HHHHhcCCCcEEEEcCccccCCCcccCce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccC-CEEE
Confidence               23558999999999999985433210       11122222   2344689999999999999999987655 9999


Q ss_pred             eeCCCccCHH
Q 018900          295 LVSDRAVTLD  304 (349)
Q Consensus       295 i~~~~~~t~~  304 (349)
                      +++.+...+.
T Consensus       212 ~~~~~~~~~~  221 (224)
T 3h2s_A          212 VRDADLEHHH  221 (224)
T ss_dssp             EEECC-----
T ss_pred             EecCcchhcc
Confidence            9987655544

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-25  Score=195.43  Aligned_cols=191  Identities=18%  Similarity=0.155  Sum_probs=145.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      |+|+||||    ||+|++|++++++|+++|+  +|++++|+++..               ..+++++.+|..+.+.+.+.
T Consensus         4 ~~~~vlVt----GatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------------~~~~~~~~~D~~~~~~~~~~   64 (215)
T 2a35_A            4 TPKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRLDNPVGPLAELLPQLDG   64 (215)
T ss_dssp             CCCEEEEE----CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTEECCBSCHHHHGGGCCS
T ss_pred             CCceEEEE----CCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------------CCCceEEeccccCHHHHHHh
Confidence            56799999    9999999999999999998  999999987530               12556677785444443333


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHH
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek  216 (349)
                      . +|+|||+++.              |+.++.++++++++.++++||++||.++|+...         ..+..+|..+|+
T Consensus        65 ~-~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~---------~~y~~sK~~~e~  134 (215)
T 2a35_A           65 S-IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS---------IFYNRVKGELEQ  134 (215)
T ss_dssp             C-CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS---------SHHHHHHHHHHH
T ss_pred             h-hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc---------cHHHHHHHHHHH
Confidence            3 7999999984              466899999999999999999999999886421         123357888999


Q ss_pred             HHHhhCCc-EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          217 YISENFSN-WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       217 ~~~~~~~~-~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                      ++++.+++ ++++||+++||+.....+..    .+. +...++ +++  .++++|++|+|++++.+++++.   +++||+
T Consensus       135 ~~~~~~~~~~~~vrp~~v~g~~~~~~~~~----~~~-~~~~~~-~~~--~~~~i~~~Dva~~~~~~~~~~~---~~~~~i  203 (215)
T 2a35_A          135 ALQEQGWPQLTIARPSLLFGPREEFRLAE----ILA-APIARI-LPG--KYHGIEACDLARALWRLALEEG---KGVRFV  203 (215)
T ss_dssp             HHTTSCCSEEEEEECCSEESTTSCEEGGG----GTT-CCCC-----C--HHHHHHHHHHHHHHHHHHTCCC---SEEEEE
T ss_pred             HHHHcCCCeEEEEeCceeeCCCCcchHHH----HHH-Hhhhhc-cCC--CcCcEeHHHHHHHHHHHHhcCC---CCceEE
Confidence            99999999 99999999999976533222    121 222222 222  5789999999999999999875   379999


Q ss_pred             eCCCccCH
Q 018900          296 VSDRAVTL  303 (349)
Q Consensus       296 ~~~~~~t~  303 (349)
                      ++++.+++
T Consensus       204 ~~~~~~~~  211 (215)
T 2a35_A          204 ESDELRKL  211 (215)
T ss_dssp             EHHHHHHH
T ss_pred             cHHHHHHh
Confidence            98875544

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=1.3e-24  Score=187.59  Aligned_cols=189  Identities=19%  Similarity=0.250  Sum_probs=143.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+|++|++++++|+++|++|++++|+.+.....           ...+++++.+|   ++++.+++++.
T Consensus         4 ~~ilVt----GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~   68 (206)
T 1hdo_A            4 KKIAIF----GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------GPRPAHVVVGDVLQAADVDKTVAGQ   68 (206)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------SCCCSEEEESCTTSHHHHHHHHTTC
T ss_pred             CEEEEE----cCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------cCCceEEEEecCCCHHHHHHHHcCC
Confidence            789999    9999999999999999999999999987544221           12467777777   56788888764


Q ss_pred             CccEEEeCCCC---------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhC
Q 018900          152 TFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF  222 (349)
Q Consensus       152 ~~d~Vi~~a~~---------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~  222 (349)
                        |+|||+++.         |+.++.++++++++.++++||++||.++|+.....+.   ....+..+|..+|+++++.+
T Consensus        69 --d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~---~~~~y~~~K~~~e~~~~~~~  143 (206)
T 1hdo_A           69 --DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP---RLQAVTDDHIRMHKVLRESG  143 (206)
T ss_dssp             --SEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG---GGHHHHHHHHHHHHHHHHTC
T ss_pred             --CEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc---cchhHHHHHHHHHHHHHhCC
Confidence              999999984         4578999999999999999999999999986543221   11122356788888998899


Q ss_pred             CcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          223 SNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      ++++++||+++ +++.... +..            .+.+.+.  .++++++|+|++++.+++++.. .|++|++++++
T Consensus       144 i~~~~lrp~~~-~~~~~~~~~~~------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~g~  205 (206)
T 1hdo_A          144 LKYVAVMPPHI-GDQPLTGAYTV------------TLDGRGP--SRVISKHDLGHFMLRCLTTDEY-DGHSTYPSHQY  205 (206)
T ss_dssp             SEEEEECCSEE-ECCCCCSCCEE------------ESSSCSS--CSEEEHHHHHHHHHHTTSCSTT-TTCEEEEECCC
T ss_pred             CCEEEEeCCcc-cCCCCCcceEe------------cccCCCC--CCccCHHHHHHHHHHHhcCccc-cccceeeeccc
Confidence            99999999997 4332211 100            0011110  4799999999999999998764 35899999875

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=1.2e-24  Score=196.21  Aligned_cols=201  Identities=14%  Similarity=0.114  Sum_probs=158.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +||+||||    ||+|+||++++++|+++|++|++++|+.....              ..+++++.+|   .+++.++++
T Consensus         2 ~~k~vlVT----Gasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~   63 (267)
T 3rft_A            2 AMKRLLVT----GAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA   63 (267)
T ss_dssp             CEEEEEEE----STTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc
Confidence            46789999    99999999999999999999999999875432              2356667776   677888887


Q ss_pred             CCCccEEEeCCCC------------ChhhHHHHHHHHHhCCCcEEEEeccccccCC-CCCCCCCCCCCCCCC----CChH
Q 018900          150 GVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD----AGHV  212 (349)
Q Consensus       150 ~~~~d~Vi~~a~~------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~-~~~~~~~e~~~~~~~----~~k~  212 (349)
                      +  +|+|||+|+.            |+.++.++++++++.+++|||++||..+|+. ....++.|+.+..+.    .+|.
T Consensus        64 ~--~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~  141 (267)
T 3rft_A           64 G--CDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKC  141 (267)
T ss_dssp             T--CSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred             C--CCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHH
Confidence            5  5999999983            6788999999999999999999999999974 334567776665543    4566


Q ss_pred             HHHHHHH----hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCcc
Q 018900          213 QVEKYIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  288 (349)
Q Consensus       213 ~~ek~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  288 (349)
                      .+|.+++    +++++++++||+.++++.                      +++....+|++++|+++++..+++.+...
T Consensus       142 ~~e~~~~~~a~~~g~~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  199 (267)
T 3rft_A          142 FGENLARMYFDKFGQETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLG  199 (267)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHHHHhCCeEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            6666654    458999999999999863                      23445567899999999999999988764


Q ss_pred             CCCEEEeeCCCccCHHHHHHHHHHHhCCCc
Q 018900          289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       289 ~~~~~~i~~~~~~t~~el~~~~~~~~g~~~  318 (349)
                      + .++++.+++..++.++...  +.+|.++
T Consensus       200 ~-~~~~~~s~~~~~~~~~~~~--~~~g~~p  226 (267)
T 3rft_A          200 C-PVVWGASANDAGWWDNSHL--GFLGWKP  226 (267)
T ss_dssp             S-CEEEECCCCTTCCBCCGGG--GGGCCCC
T ss_pred             c-eEEEEeCCCCCCcccChhH--HHCCCCC
Confidence            4 6888888877777776443  5667643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.1e-23  Score=186.40  Aligned_cols=197  Identities=17%  Similarity=0.218  Sum_probs=142.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      ..+||+||||    ||+|+||++|+++|+++| ++|++++|+.+...++           ...+++++.+|   ++++.+
T Consensus        20 ~~~mk~vlVt----GatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~   84 (236)
T 3qvo_A           20 QGHMKNVLIL----GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----------YPTNSQIIMGDVLNHAALKQ   84 (236)
T ss_dssp             --CCEEEEEE----TTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----------CCTTEEEEECCTTCHHHHHH
T ss_pred             cCcccEEEEE----eCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----------ccCCcEEEEecCCCHHHHHH
Confidence            3467899999    999999999999999999 8999999987655432           22356677776   677888


Q ss_pred             hhcCCCccEEEeCCCCC--hhhHHHHHHHHHhCCCcEEEEeccccccCCCCCC--CCCCCCCCCCCCChHHHHHHHHhhC
Q 018900          147 VVGGVTFDVVLDNNGKN--LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHVQVEKYISENF  222 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~--~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~--~~~e~~~~~~~~~k~~~ek~~~~~~  222 (349)
                      ++++.  |+|||+++..  ...++++++++++.+++|||++||.++|+.....  +..+.....+...+..+|+++++.+
T Consensus        85 ~~~~~--D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  162 (236)
T 3qvo_A           85 AMQGQ--DIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASG  162 (236)
T ss_dssp             HHTTC--SEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSC
T ss_pred             HhcCC--CEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCC
Confidence            88875  9999999853  2457899999999999999999999999865432  2222222223334666788888899


Q ss_pred             CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc-ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          223 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       223 ~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      ++++++|||+++++.....               .....+.. ...+++.+|+|++++.++.++....+++|++++++
T Consensus       163 i~~~~vrPg~i~~~~~~~~---------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          163 LEYTILRPAWLTDEDIIDY---------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             SEEEEEEECEEECCSCCCC---------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             CCEEEEeCCcccCCCCcce---------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            9999999999998754321               00011111 13589999999999999999875446999999876

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.90  E-value=5.9e-23  Score=182.02  Aligned_cols=193  Identities=22%  Similarity=0.236  Sum_probs=144.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|+  +|++++|+++....           ....++.++.+|   ++++.++
T Consensus        17 ~~~~vlVt----Gasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~d~~~~~~~   81 (242)
T 2bka_A           17 QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----------EAYKNVNQEVVDFEKLDDYASA   81 (242)
T ss_dssp             TCCEEEEE----CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----------GGGGGCEEEECCGGGGGGGGGG
T ss_pred             cCCeEEEE----CCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc-----------cccCCceEEecCcCCHHHHHHH
Confidence            45789999    9999999999999999999  99999998754421           112356777777   5667777


Q ss_pred             hcCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHH
Q 018900          148 VGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~  214 (349)
                      +++  +|+|||+++.             |+.++.++++++++.++++||++||.++|+...         ..+..+|..+
T Consensus        82 ~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~---------~~Y~~sK~~~  150 (242)
T 2bka_A           82 FQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN---------FLYLQVKGEV  150 (242)
T ss_dssp             GSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS---------SHHHHHHHHH
T ss_pred             hcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc---------chHHHHHHHH
Confidence            764  6999999995             467899999999999999999999999886321         1234578889


Q ss_pred             HHHHHhhCC-cEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEE
Q 018900          215 EKYISENFS-NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  293 (349)
Q Consensus       215 ek~~~~~~~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~  293 (349)
                      |.++++.++ +++++||+++||+........++........+. .++    ...+++++|+|++++.+++++...  +.+
T Consensus       151 e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~~~~~~~~~--~~~  223 (242)
T 2bka_A          151 EAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLNNVVRPRDK--QME  223 (242)
T ss_dssp             HHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHHHHTSCCCS--SEE
T ss_pred             HHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHHHHhCcccc--Cee
Confidence            999999999 599999999999975433333333333332221 111    134899999999999999987652  466


Q ss_pred             EeeCC
Q 018900          294 NLVSD  298 (349)
Q Consensus       294 ~i~~~  298 (349)
                      .+.++
T Consensus       224 ~~~~~  228 (242)
T 2bka_A          224 LLENK  228 (242)
T ss_dssp             EEEHH
T ss_pred             EeeHH
Confidence            66543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.89  E-value=1e-22  Score=178.20  Aligned_cols=197  Identities=12%  Similarity=0.103  Sum_probs=144.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHH-hCCCeEEEEEcCCC-CcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll-~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ||++||||    ||+|+||++++++|+ ++|++|++++|+++ ...++.         ....+++++.+|   .+++.++
T Consensus         4 mmk~vlVt----Gasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~   70 (221)
T 3r6d_A            4 MYXYITIL----GAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---------IDHERVTVIEGSFQNPGXLEQA   70 (221)
T ss_dssp             SCSEEEEE----STTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---------HTSTTEEEEECCTTCHHHHHHH
T ss_pred             eEEEEEEE----eCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---------cCCCceEEEECCCCCHHHHHHH
Confidence            55679999    999999999999999 89999999999875 443210         012356677776   6778888


Q ss_pred             hcCCCccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCC--CCCCCC-CCCCChHHHHHHHHhhCC
Q 018900          148 VGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH--VEGDVV-KPDAGHVQVEKYISENFS  223 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~--~e~~~~-~~~~~k~~~ek~~~~~~~  223 (349)
                      +++.  |+|||+++. |++ ++++++++++.+++|||++||.++|+.......  ...... .+..+|..+|+++++.++
T Consensus        71 ~~~~--d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i  147 (221)
T 3r6d_A           71 VTNA--EVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNL  147 (221)
T ss_dssp             HTTC--SEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCS
T ss_pred             HcCC--CEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCC
Confidence            8764  999999996 677 999999999999999999999998875321100  000000 233468889999999999


Q ss_pred             cEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC-cceeeeeHHHHHHHHHHHh--cCCCccCCCEEEeeCCC
Q 018900          224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM-QFTNIAHVRDLSSMLTLAV--ENPEAASSNIFNLVSDR  299 (349)
Q Consensus       224 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~Dva~~~~~~~--~~~~~~~~~~~~i~~~~  299 (349)
                      +++++|||+++++.....              +.....+. ....+++.+|+|++++.++  .++....++.+.+.++.
T Consensus       148 ~~~~vrpg~v~~~~~~~~--------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          148 NYTILRLTWLYNDPEXTD--------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             EEEEEEECEEECCTTCCC--------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             CEEEEechhhcCCCCCcc--------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            999999999998732211              11100111 1124899999999999999  88776555788888654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.82  E-value=2.6e-21  Score=172.38  Aligned_cols=206  Identities=13%  Similarity=0.065  Sum_probs=135.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC--
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~--  151 (349)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.+....               .+..+..|.++++++++..  
T Consensus         1 Mk~vlVt----Gasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~~~   61 (255)
T 2dkn_A            1 MSVIAIT----GSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRCGG   61 (255)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHcCC
Confidence            4689999    999999999999999999999999998754321               1222233466777777632  


Q ss_pred             CccEEEeCCCC-------------ChhhHHHHHHHHHh----CCCcEEEEeccccccCCCCCCC-CC-------CC----
Q 018900          152 TFDVVLDNNGK-------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP-HV-------EG----  202 (349)
Q Consensus       152 ~~d~Vi~~a~~-------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~~~~~~~-~~-------e~----  202 (349)
                      ++|+|||+|+.             |+.++.++++++..    .+.++||++||..+|+.....+ ..       |+    
T Consensus        62 ~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           62 VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             CCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHH
T ss_pred             CccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhh
Confidence            47999999984             45667777776544    4678999999999887542110 00       00    


Q ss_pred             -------CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          203 -------DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       203 -------~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                             ....+..+|.++|.+++.       .+++++++||++++++...     .++.....+....... + ....+
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~-----~~~~~~~~~~~~~~~~-~-~~~~~  214 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ-----ASKADPRYGESTRRFV-A-PLGRG  214 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-----HHHHCTTTHHHHHSCC-C-TTSSC
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-----hcccchhhHHHHHHHH-H-HhcCC
Confidence                   001123456666665543       4899999999999987421     1111000000001111 1 33468


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHH
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~e  305 (349)
                      ++++|+|++++.+++++.. ..|++|++.+|+.+++.|
T Consensus       215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999999999987632 346899999987666543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.81  E-value=3.8e-20  Score=167.32  Aligned_cols=218  Identities=17%  Similarity=0.138  Sum_probs=148.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.. .++.++.+|   .+++.+++
T Consensus        15 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~   83 (278)
T 2bgk_A           15 QDKVAIIT----GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-------NNIGSPDVISFVHCDVTKDEDVRNLV   83 (278)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHH-------HHhCCCCceEEEECCCCCHHHHHHHH
Confidence            46889999    99999999999999999999999999764322110       01111 145666776   56666666


Q ss_pred             cCC-----CccEEEeCCCC----------------------ChhhHHHHHHHHHh----CCCcEEEEeccccccCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +..     ++|+|||+||.                      |+.++.++++++..    .+.++||++||...|..... 
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  162 (278)
T 2bgk_A           84 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-  162 (278)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-
Confidence            532     47999999983                      23445566655543    46789999999887764320 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                           ....|..+|.+++.+.+.       .+++++++|||+++++......  ...+...+....+.       ....+
T Consensus       163 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  230 (278)
T 2bgk_A          163 -----VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-------LKGTL  230 (278)
T ss_dssp             -----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-------SCSCC
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccc-------ccccc
Confidence                 111233456666655443       4899999999999998654321  12233333322211       12347


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHh
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~  314 (349)
                      ++++|+|++++.++.++.. ..|++|++.+|..+++.|+++.+.+++
T Consensus       231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          231 LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             CCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            8999999999999976533 456899999999999999999887643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.80  E-value=1.3e-19  Score=164.27  Aligned_cols=220  Identities=15%  Similarity=0.115  Sum_probs=147.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.        ......+.++.+|   .++++++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~~~~~~~   71 (281)
T 3m1a_A            4 SAKVWLVT----GASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV--------AAYPDRAEAISLDVTDGERIDVVAA   71 (281)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH--------HHCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhccCCceEEEeeCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875543221        1112345666666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.+    ++.++..+++.+..+||++||...+....+    
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  147 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG----  147 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----
T ss_pred             HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC----
Confidence            33     47999999993                    3455    677777778888889999999776543211    


Q ss_pred             CCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCC------chHHHHHHHHhCCCcccCCCCCccee
Q 018900          201 EGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                         ...|..+|.+++.+.+    +   .|+++.++|||++.++.....      ....+........++....   ....
T Consensus       148 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  221 (281)
T 3m1a_A          148 ---FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGS---DGSQ  221 (281)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC--------
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhc---cCCC
Confidence               1112345666555443    2   489999999999988753221      1111222221111111111   2245


Q ss_pred             eeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      +.+++|+|++++.+++++..  +..|+++++......+....+.+.++.
T Consensus       222 ~~~~~dva~a~~~~~~~~~~--~~~~~l~s~~~~~i~g~~~~i~~~~~~  268 (281)
T 3m1a_A          222 PGDPAKAAAAIRLALDTEKT--PLRLALGGDAVDFLTGHLDSVRAELTE  268 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSSSC--CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhCCCC--CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence            78899999999999998865  479999998877778888777776653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.79  E-value=1.3e-19  Score=160.69  Aligned_cols=199  Identities=18%  Similarity=0.212  Sum_probs=136.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++..       ++  .+++++.+|   .++++++++
T Consensus         6 ~~~~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~--~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 1cyd_A            6 SGLRALVT----GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-------EC--PGIEPVCVDLGDWDATEKALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------hc--cCCCcEEecCCCHHHHHHHHH
Confidence            46799999    999999999999999999999999998643322110       01  245555666   677888887


Q ss_pred             CC-CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CcEEEEeccccccCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~g-v~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      .. ++|+|||+|+.                    |+.++.++++++..    .+ .++||++||...|....+       
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  145 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-------  145 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC-------
Confidence            54 38999999993                    35566666665543    35 679999999887754321       


Q ss_pred             CCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          204 VVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ...|..+|...+.+.+.       .++++.++||+.++++..... ....++..+..+.+         ...+++++|+|
T Consensus       146 ~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva  216 (244)
T 1cyd_A          146 LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVV  216 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHH
Confidence            11233456666665543       379999999999998743211 11223344443332         24689999999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++++.++.++.. ..|+.+++.+|..
T Consensus       217 ~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          217 NSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             HHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             HHHHHHhCchhhcccCCEEEECCCcc
Confidence            999999987643 4568999988753

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.78  E-value=1.7e-19  Score=160.90  Aligned_cols=204  Identities=13%  Similarity=0.202  Sum_probs=138.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ..++.++.+|   +++++++
T Consensus        10 ~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   78 (255)
T 1fmc_A           10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVV-------DEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999864332110       1111  1245556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC-------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..     ++|+|||+|+.                   |+.++.++++++    ++.+.++||++||...+....+   
T Consensus        79 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  155 (255)
T 1fmc_A           79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN---  155 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT---
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC---
Confidence            6522     47999999983                   345555666655    4557789999999887653221   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|...+.+.+.       .++++.++|||.++++.........+...+..+.++         ..+++++
T Consensus       156 ----~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  222 (255)
T 1fmc_A          156 ----MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQ  222 (255)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHH
T ss_pred             ----CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHH
Confidence                11223456666655443       289999999999998743222223344445444432         2367899


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                      |+|++++.++.++.. ..|++|++.+|+.+|+
T Consensus       223 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          223 DIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            999999999976543 3568999999987664

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.75  E-value=1.7e-18  Score=149.03  Aligned_cols=170  Identities=11%  Similarity=0.099  Sum_probs=121.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC-C
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-T  152 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~-~  152 (349)
                      +|+||||    ||+|+||++++++|+ +|++|++++|+.+                   .+..+..|+++++++++.. +
T Consensus         3 kM~vlVt----Gasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~   58 (202)
T 3d7l_A            3 AMKILLI----GASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGK   58 (202)
T ss_dssp             SCEEEEE----TTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCC
Confidence            3579999    999999999999999 9999999999763                   1222333577777777654 4


Q ss_pred             ccEEEeCCC--------------------CChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCCCCCCCCCCC
Q 018900          153 FDVVLDNNG--------------------KNLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (349)
Q Consensus       153 ~d~Vi~~a~--------------------~~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~  209 (349)
                      +|+|||+|+                    .|+.++.++++++...   + ++||++||...+....+       ...+..
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~-------~~~Y~~  130 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQ-------GASAAM  130 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTT-------CHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCc-------cHHHHH
Confidence            799999998                    2566788888888765   4 69999999766543211       111234


Q ss_pred             ChHHHHHHHHh------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          210 GHVQVEKYISE------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       210 ~k~~~ek~~~~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      +|..+|.+.+.      .+++++++||++++++..          ...         +......+++++|+|++++.++.
T Consensus       131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----------~~~---------~~~~~~~~~~~~dva~~~~~~~~  191 (202)
T 3d7l_A          131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD----------KLE---------PFFEGFLPVPAAKVARAFEKSVF  191 (202)
T ss_dssp             HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----------HHG---------GGSTTCCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh----------hhh---------hhccccCCCCHHHHHHHHHHhhh
Confidence            56666666543      379999999999998631          111         11123568999999999998885


Q ss_pred             CCCccCCCEEEee
Q 018900          284 NPEAASSNIFNLV  296 (349)
Q Consensus       284 ~~~~~~~~~~~i~  296 (349)
                      ..  ..|++|++.
T Consensus       192 ~~--~~G~~~~vd  202 (202)
T 3d7l_A          192 GA--QTGESYQVY  202 (202)
T ss_dssp             SC--CCSCEEEEC
T ss_pred             cc--ccCceEecC
Confidence            43  335788873

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.74  E-value=6.6e-19  Score=161.23  Aligned_cols=219  Identities=15%  Similarity=0.157  Sum_probs=143.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee---cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~~l~  145 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.   ..++.++.+|   .+++.
T Consensus        24 l~~k~vlIT----GasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dl~~~~~~~   92 (302)
T 1w6u_A           24 FQGKVAFIT----GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATA-------EQISSQTGNKVHAIQCDVRDPDMVQ   92 (302)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHHSSCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHhcCCceEEEEeCCCCHHHHH
Confidence            346899999    99999999999999999999999999864332110       1111   2346667777   55666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH-----hCCCcEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~-----~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++++.     +.+..+||++||...+....
T Consensus        93 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  172 (302)
T 1w6u_A           93 NTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG  172 (302)
T ss_dssp             HHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC
Confidence            665543     47999999983                    3445555655543     34567999999976654321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch--HHHHHHHHhCCCcccCCCCCcce
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE--EWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      .       ...+..+|.+++.+.+.       .|++++++|||.+++++......  ......+....+.         .
T Consensus       173 ~-------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~  236 (302)
T 1w6u_A          173 F-------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------G  236 (302)
T ss_dssp             T-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------S
T ss_pred             C-------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc---------C
Confidence            1       11123456666655433       48999999999999874321110  0111233332221         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                      .+++++|+|++++.++.++.. ..|++|++.+|..+++.|+++.+.+..|..
T Consensus       237 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~  288 (302)
T 1w6u_A          237 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQ  288 (302)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred             CCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcccc
Confidence            367899999999999976543 356899999998888889888887766643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.74  E-value=4.7e-18  Score=150.63  Aligned_cols=199  Identities=15%  Similarity=0.184  Sum_probs=132.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++  .+++++.+|   .+++.++++
T Consensus         6 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~--~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 3d3w_A            6 AGRRVLVT----GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-------REC--PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc--CCCCEEEEeCCCHHHHHHHHH
Confidence            45789999    99999999999999999999999999864332211       011  144555666   677788887


Q ss_pred             CC-CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CcEEEEeccccccCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~g-v~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      .. ++|+|||+|+.                    |+.++.++++++.    +.+ ..+||++||...+.....       
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  145 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN-------  145 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCC-------
Confidence            54 38999999983                    3445555555443    335 689999999876553211       


Q ss_pred             CCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          204 VVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ...|..+|.++|.+.+.       .++++.++|||.++++...... ...+...+..+.+         ...+++++|+|
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva  216 (244)
T 3d3w_A          146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP---------LGKFAEVEHVV  216 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCT---------TCSCBCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCC---------CCCCcCHHHHH
Confidence            11233467666665543       3799999999999887532100 0111222323222         13578999999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++++.++.++.. ..|++|++.+|..
T Consensus       217 ~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          217 NAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999986532 3568999998854

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.74  E-value=3.6e-17  Score=146.74  Aligned_cols=192  Identities=16%  Similarity=0.184  Sum_probs=131.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....              ..+.++.+|   +++++++++
T Consensus        27 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~~~Dv~d~~~v~~~~~   88 (260)
T 3un1_A           27 QQKVVVIT----GASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------------PDIHTVAGDISKPETADRIVR   88 (260)
T ss_dssp             TCCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------------TTEEEEESCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------------CceEEEEccCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754321              145566666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+..++|++||...+......+  
T Consensus        89 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~--  166 (260)
T 3un1_A           89 EGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMP--  166 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCC--
T ss_pred             HHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCc--
Confidence            32     47999999983                    455666666655    667788999999977654322111  


Q ss_pred             CCCCCCCCCChHHHHHHHH----hh---CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS----EN---FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~----~~---~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|.+++.+.+    +.   |+++.+++||+++++......    ...+....+         ...+.+++|
T Consensus       167 ---~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~p---------~~r~~~~~d  230 (260)
T 3un1_A          167 ---SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLHP---------VGRMGEIRD  230 (260)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTST---------TSSCBCHHH
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccCC---------CCCCcCHHH
Confidence               1112235666555443    22   799999999999998654321    222222222         134568999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCcc
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAV  301 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~  301 (349)
                      +|++++.+.+.. ...|+++++.+|..+
T Consensus       231 va~av~~L~~~~-~itG~~i~vdGG~~~  257 (260)
T 3un1_A          231 VVDAVLYLEHAG-FITGEILHVDGGQNA  257 (260)
T ss_dssp             HHHHHHHHHHCT-TCCSCEEEESTTGGG
T ss_pred             HHHHHHHhcccC-CCCCcEEEECCCeec
Confidence            999999984443 334699999998654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.73  E-value=3.9e-18  Score=154.30  Aligned_cols=214  Identities=15%  Similarity=0.181  Sum_probs=128.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-----ecCCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-----VSAGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~D---~~~l  144 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++     ...++.++.+|   ++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~   73 (278)
T 1spx_A            5 AEKVAIIT----GSSNGIGRATAVLFAREGAKVTITGRHAERLEETR-------QQILAAGVSEQNVNSVVADVTTDAGQ   73 (278)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcccCCCceeEEecccCCHHHH
Confidence            46789999    99999999999999999999999999864332211       011     11235566666   5666


Q ss_pred             HhhhcCC-----CccEEEeCCCCC------------------------hhhHHHHHHHH----HhCCCcEEEEeccccc-
Q 018900          145 GNVVGGV-----TFDVVLDNNGKN------------------------LDAVRPVADWA----KSSGVKQFLFISSAGI-  190 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~~------------------------~~~~~~ll~~a----~~~gv~~~i~~Ss~~v-  190 (349)
                      +++++..     ++|+|||+||..                        +.++.++++++    ++.+ .+||++||... 
T Consensus        74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~  152 (278)
T 1spx_A           74 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG  152 (278)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc
Confidence            6666522     479999999841                        22334444444    3336 79999999765 


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc--hHHH------HHHHHhCCC
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC--EEWF------FDRIVRKRP  255 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~------~~~~~~~~~  255 (349)
                      +.....       ...|..+|.+++.+.+.       .|++++++|||++.++......  ....      ...+....+
T Consensus       153 ~~~~~~-------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p  225 (278)
T 1spx_A          153 LHATPD-------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP  225 (278)
T ss_dssp             SSCCTT-------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT
T ss_pred             ccCCCC-------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC
Confidence            432211       11133456665555432       4899999999999887543210  0000      122221111


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc--cCCCEEEeeCCCccCHHHHHHHHHHHh
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~~~i~~~~~~t~~el~~~~~~~~  314 (349)
                      .         ..+++.+|+|++++.++.++..  ..|++|++.+|..+++.|+++.+.+++
T Consensus       226 ~---------~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          226 A---------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             T---------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             C---------cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            1         2368999999999999876542  346999999999999999999998764

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=3.3e-17  Score=144.74  Aligned_cols=192  Identities=16%  Similarity=0.119  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+ ..                .+.++.+|   .+++.++++
T Consensus         1 ~~k~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~-~~----------------~~~~~~~D~~~~~~~~~~~~   59 (242)
T 1uay_A            1 MERSALVT----GGASGLGRAAALALKARGYRVVVLDLRRE-GE----------------DLIYVEGDVTREEDVRRAVA   59 (242)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS----------------SSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEccCcc-cc----------------ceEEEeCCCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999874 21                23455555   666776665


Q ss_pred             CC----CccEEEeCCCC------------------------ChhhHHHHHHHHHhC----C------CcEEEEecccccc
Q 018900          150 GV----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS----G------VKQFLFISSAGIY  191 (349)
Q Consensus       150 ~~----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~----g------v~~~i~~Ss~~vy  191 (349)
                      ..    ++|+|||+++.                        |+.++.++++++...    +      ..+||++||...+
T Consensus        60 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  139 (242)
T 1uay_A           60 RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF  139 (242)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred             HHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence            32    47999999983                        234566666666432    2      2399999998876


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .....       ...+..+|.+.+.+.+.       .+++++++|||.++++.... ....+...+....++  .     
T Consensus       140 ~~~~~-------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~--~-----  204 (242)
T 1uay_A          140 EGQIG-------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--P-----  204 (242)
T ss_dssp             HCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--S-----
T ss_pred             cCCCC-------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCCC--c-----
Confidence            54221       11122356555544432       38999999999999875322 122233333333322  1     


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                       ..+++++|+|++++.++.+ ....|++|++.+|..++
T Consensus       205 -~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          205 -PRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             -CSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCCC
T ss_pred             -ccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCeecC
Confidence             2367899999999999988 44456899999886543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.73  E-value=9.5e-18  Score=150.02  Aligned_cols=202  Identities=16%  Similarity=0.215  Sum_probs=133.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ..++.++.+|   .+++.++
T Consensus        12 ~~k~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~~   80 (260)
T 3awd_A           12 DNRVAIVT----GGAQNIGLACVTALAEAGARVIIADLDEAMATKAV-------EDLRMEGHDVSSVVMDVTNTESVQNA   80 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEecCCCHHHHHHH
Confidence            46789999    99999999999999999999999999864332110       1111  1245666676   5666666


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHH----hCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||+||.                     |+.++.++++++.    +.+..+||++||...+......
T Consensus        81 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  160 (260)
T 3awd_A           81 VRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ  160 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC
Confidence            6532     47999999983                     2344555665543    4467899999997654332111


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      +     ...+..+|.+++.+.+.       .+++++++|||+++++..... ....+...+..+.++         ..++
T Consensus       161 ~-----~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  226 (260)
T 3awd_A          161 Q-----QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPM---------GRVG  226 (260)
T ss_dssp             C-----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTT---------SSCB
T ss_pred             C-----ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCc---------CCCC
Confidence            0     01233456666655543       489999999999999865411 112333444443322         2367


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+|++++.++.++.. ..|++|++.+|.
T Consensus       227 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          227 QPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            899999999999976533 456899999885

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.73  E-value=3.8e-18  Score=152.19  Aligned_cols=199  Identities=19%  Similarity=0.254  Sum_probs=112.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ...+.++.+|   +++++++
T Consensus         8 ~~k~vlIT----Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            8 ENKVGIVT----GSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-------KQIVADGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            56899999    99999999999999999999999999865443211       1111  1234556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC-----------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-----------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ++..     ++|+|||+||.                       |+.+    ++.++..+++.+..+||++||...|... 
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  155 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS-  155 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC-
Confidence            5532     47999999984                       2333    5556666666677899999998776321 


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                               ..|..+|.+.+.+.+.       .++++..++||.++++.........+...+..+.++         ..+
T Consensus       156 ---------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~  217 (253)
T 3qiv_A          156 ---------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL---------SRM  217 (253)
T ss_dssp             -------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCC---------CCC
Confidence                     2255688887766543       278999999999998754332112222223222222         235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+++|+|++++.++.++.. .+|++|++.+|..+
T Consensus       218 ~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          218 GTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             --CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             CCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence            5789999999999986543 35699999998754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.73  E-value=1.6e-17  Score=147.72  Aligned_cols=203  Identities=12%  Similarity=0.162  Sum_probs=132.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+...++...    .......++.++.+|   ++++.++++
T Consensus         1 ~~k~vlIt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (250)
T 2cfc_A            1 MSRVAIVT----GASSGNGLAIATRFLARGDRVAALDLSAETLEETART----HWHAYADKVLRVRADVADEGDVNAAIA   72 (250)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HSTTTGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            46789999    9999999999999999999999999986443221100    000002245666666   566666665


Q ss_pred             CC-----CccEEEeCCCC-----------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK-----------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-----------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ..     ++|+|||+||.                       |+.++    +.++..+++.+.++||++||...+..... 
T Consensus        73 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  151 (250)
T 2cfc_A           73 ATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG-  151 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-
Confidence            22     47999999983                       12223    34555566667889999999876543211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ...|..+|..++.+.+.       .+++++++|||+++++...... ...+...+....++         ..+.
T Consensus       152 ------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~  216 (250)
T 2cfc_A          152 ------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ---------KEIG  216 (250)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT---------CSCB
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC---------CCCc
Confidence                  11223456666555433       2899999999999998643211 11223333333221         2367


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       217 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          217 TAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             CHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            899999999999987643 456899998874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.73  E-value=5e-18  Score=153.97  Aligned_cols=220  Identities=16%  Similarity=0.160  Sum_probs=148.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-----CCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-----AGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~D---~~~l  144 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++..     ..+.++.+|   ++++
T Consensus        10 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~~Dv~~~~~v   78 (281)
T 3svt_A           10 QDRTYLVT----GGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAV-------QELEALGANGGAIRYEPTDITNEDET   78 (281)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTCCSSCEEEEEECCTTSHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHhCCCCceEEEEeCCCCCHHHH
Confidence            46899999    99999999999999999999999999865433211       11111     134566666   5666


Q ss_pred             HhhhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      .++++..     ++|++||+||.                     |+.++.++++++    ++.+-.+||++||...+...
T Consensus        79 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  158 (281)
T 3svt_A           79 ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH  158 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC
Confidence            6665543     47999999994                     344555555544    44555699999998766432


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ...|..+|.+++.+.+.       .++++..++||.+.++..... ....+...+....++         .
T Consensus       159 ~~-------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~  222 (281)
T 3svt_A          159 RW-------FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL---------P  222 (281)
T ss_dssp             TT-------CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS---------S
T ss_pred             CC-------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC---------C
Confidence            21       11233456665554432       369999999999988643210 011122333333332         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC-HHHHHHHHHHHhCCCce
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT-LDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t-~~el~~~~~~~~g~~~~  319 (349)
                      .+.+++|+|++++.++.++.. ..|++|++.+|..++ ..|+++.+.+.+|.+..
T Consensus       223 r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~  277 (281)
T 3svt_A          223 RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDAL  277 (281)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTGG
T ss_pred             CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCccc
Confidence            356799999999999987543 356999999998777 78899999999987643

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.73  E-value=4.9e-18  Score=152.57  Aligned_cols=201  Identities=15%  Similarity=0.202  Sum_probs=120.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.  ...+.++.+|   .+++.++
T Consensus        13 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (266)
T 1xq1_A           13 KAKTVLVT----GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-------SKWQKKGFQVTGSVCDASLRPEREKL   81 (266)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            46889999    99999999999999999999999999764332110       1111  1245566666   5556666


Q ss_pred             hcC------CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~------~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++.      .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+..... 
T Consensus        82 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  160 (266)
T 1xq1_A           82 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV-  160 (266)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------
T ss_pred             HHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC-
Confidence            542      247999999983                    345566776666    5667789999999776543211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|..++.+.+.       .+++++++|||+++++.........+...+....+         ...+++
T Consensus       161 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~  225 (266)
T 1xq1_A          161 ------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKP---------LGRFGE  225 (266)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CC
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCC---------CCCCcC
Confidence                  11123456665555433       38999999999999986433111111111111111         124689


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++|+|++++.++.++.. ..|+++++.+|..
T Consensus       226 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          226 PEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             GGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            99999999999976533 3568999998854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.72  E-value=9.9e-18  Score=149.38  Aligned_cols=201  Identities=11%  Similarity=0.150  Sum_probs=130.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCC-eEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++ ...+ .++.+|   .+++++++
T Consensus        10 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~~D~~~~~~~~~~~   77 (254)
T 2wsb_A           10 DGACAAVT----GAGSGIGLEICRAFAASGARLILIDREAAALDRAA-------QEL-GAAVAARIVADVTDAEAMTAAA   77 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-GGGEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-cccceeEEEEecCCHHHHHHHH
Confidence            46789999    99999999999999999999999999864332110       111 1233 556666   55666655


Q ss_pred             cC----CCccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          149 GG----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       149 ~~----~~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +.    .++|+|||+||.                    |+.+    ++.++..+++.+.++||++||...+......+  
T Consensus        78 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~--  155 (254)
T 2wsb_A           78 AEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQF--  155 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSC--
T ss_pred             HHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCc--
Confidence            42    247999999983                    2334    34445555666788999999987654322110  


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                         ...+..+|.+.+.+.+.       .+++++++|||+++++...... ...+...+....+.         ..+++++
T Consensus       156 ---~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  223 (254)
T 2wsb_A          156 ---ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM---------GRCGEPS  223 (254)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT---------SSCBCHH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC---------CCCCCHH
Confidence               01233456666655433       2899999999999986422100 01223333333221         2468999


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.++.. ..|+++++.+|.
T Consensus       224 dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          224 EIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCcccccccCCEEEECCCE
Confidence            999999999976533 456899998874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.72  E-value=7.5e-18  Score=151.25  Aligned_cols=203  Identities=14%  Similarity=0.169  Sum_probs=132.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee---cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.   ..++.++.+|   .+++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~D~~~~~~~~~   74 (263)
T 3ai3_A            6 SGKVAVIT----GSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA-------RSLKEKFGVRVLEVAVDVATPEGVDA   74 (263)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHHCCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            46789999    99999999999999999999999999864332110       1111   2245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...|..... 
T Consensus        75 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  153 (263)
T 3ai3_A           75 VVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY-  153 (263)
T ss_dssp             HHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC-
Confidence            66532     47999999983                    2344444444    445567789999999887654211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc----------hHHHHHHHHhC-CCcccC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRK-RPVPIP  259 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~-~~~~~~  259 (349)
                            ...|..+|.+++.+.+.       .|+++.++|||+++++......          ...+...+... .+    
T Consensus       154 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  223 (263)
T 3ai3_A          154 ------EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP----  223 (263)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT----
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC----
Confidence                  11223456665554432       4899999999999987421100          01111111111 11    


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                           ...+++++|+|++++.++.++.. ..|++|++.+|..++
T Consensus       224 -----~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          224 -----IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             -----TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             -----CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence                 13478999999999999987543 356899999987554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.71  E-value=9.9e-18  Score=150.22  Aligned_cols=209  Identities=18%  Similarity=0.211  Sum_probs=133.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++ ...+.++.+|   +++++++++
T Consensus         7 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   74 (259)
T 4e6p_A            7 EGKSALIT----GSARGIGRAFAEAYVREGATVAIADIDIERARQAA-------AEI-GPAAYAVQMDVTRQDSIDAAIA   74 (259)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCCceEEEeeCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999865443211       111 2245566666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCC-CcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~g-v~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||+||.                    |+.++.++++++.    +.+ ..+||++||...+.....   
T Consensus        75 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  151 (259)
T 4e6p_A           75 ATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL---  151 (259)
T ss_dssp             HHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC---
Confidence            32     48999999993                    4555666666553    323 469999999776543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC---CCcccCCCCCcceeee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK---RPVPIPGSGMQFTNIA  269 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i  269 (349)
                          ...|..+|.+++.+.+.       .++++..++||.++++....  ...++......   ......++......+.
T Consensus       152 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  225 (259)
T 4e6p_A          152 ----VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMG  225 (259)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred             ----ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCc
Confidence                11223456665554432       38999999999999875321  11111111111   1111112222335688


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      +++|+|++++.++.+... ..|++|++.+|..+|
T Consensus       226 ~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          226 TAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             CTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            999999999998876543 456999999987553

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.71  E-value=8.6e-18  Score=151.39  Aligned_cols=199  Identities=17%  Similarity=0.175  Sum_probs=130.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++| +.+..+++.       .++.  ..++.++.+|   .+++.+
T Consensus        20 ~~k~vlIt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~   88 (274)
T 1ja9_A           20 AGKVALTT----GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV-------AELKKLGAQGVAIQADISKPSEVVA   88 (274)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHH
Confidence            46789999    99999999999999999999999999 433221110       1111  1245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC---CCcEEEEecccccc-CCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIY-KPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy-~~~~~~  197 (349)
                      +++..     ++|+|||+|+.                    |+.++.++++++...   + ++||++||...+ ..... 
T Consensus        89 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~-  166 (274)
T 1ja9_A           89 LFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPN-  166 (274)
T ss_dssp             HHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCS-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCC-
Confidence            66532     47999999983                    455677777766553   4 699999998776 32111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-----------Cch-HHHHHHHHhCCCccc
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-----------DCE-EWFFDRIVRKRPVPI  258 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-----------~~~-~~~~~~~~~~~~~~~  258 (349)
                            ...+..+|..+|.+.+.       .+++++++|||.++++....           ... ..+...+..+.    
T Consensus       167 ------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  236 (274)
T 1ja9_A          167 ------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN----  236 (274)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS----
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC----
Confidence                  11133456666655543       28999999999998753210           011 11222222222    


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                           ....+++++|+|++++.++.++.. ..|++|++.+|.
T Consensus       237 -----~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          237 -----PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence                 224578999999999999987543 356899998873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.71  E-value=2.1e-16  Score=142.49  Aligned_cols=199  Identities=15%  Similarity=0.159  Sum_probs=135.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++ ..++..+.+|   .++++++++
T Consensus        10 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~~   77 (271)
T 3tzq_B           10 ENKVAIIT----GACGGIGLETSRVLARAGARVVLADLPETDLAGAA-------ASV-GRGAVHHVVDLTNEVSVRALID   77 (271)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH-------HHH-CTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHh-CCCeEEEECCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999876543211       111 2345666666   566666665


Q ss_pred             CC-----CccEEEeCCCC----------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ..     ++|++||+||.                      |+.++.++++++    ++.+..+||++||...+.....  
T Consensus        78 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--  155 (271)
T 3tzq_B           78 FTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM--  155 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC--
Confidence            32     47999999983                      234555566655    7777889999999876543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.+++.+.+.       +|+++..++||.++++.........+...+....+.         ..+.+.
T Consensus       156 -----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p  221 (271)
T 3tzq_B          156 -----STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEP  221 (271)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCH
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCH
Confidence                 11223456555544332       489999999999999876533333333444333322         235678


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++.++.. ..|+++++.+|.
T Consensus       222 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          222 HEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            9999999999987643 467999999884

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.71  E-value=1.2e-17  Score=149.67  Aligned_cols=212  Identities=14%  Similarity=0.104  Sum_probs=127.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc--cceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF--NEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.......-  ......++.++.+|   .+++.++
T Consensus         6 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            6 RSALALVT----GAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            46789999    999999999999999999999999998654322110000000  00001346667777   5556666


Q ss_pred             hcCC-----Cc-cEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CcEEEEeccccccCCCCC
Q 018900          148 VGGV-----TF-DVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~~~-----~~-d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~g-v~~~i~~Ss~~vy~~~~~  196 (349)
                      ++..     ++ |+|||+||.                    |+.++.++++++..    .+ ..+||++||...+....+
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG  161 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence            5543     24 999999983                    34556666666544    34 579999999754322110


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...+..+|.+++.+.+.       .+++++++|||+++++.... ....+...+..+.+         ...++
T Consensus       162 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~  224 (264)
T 2pd6_A          162 -------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMIP---------MGHLG  224 (264)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CTGGGCT---------TCSCB
T ss_pred             -------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhCC---------CCCCC
Confidence                   11123456655544432       48999999999999986432 11111111111111         12467


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHH
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~e  305 (349)
                      +++|+|++++.++.++.. ..|+.+++.+|..++...
T Consensus       225 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          225 DPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             CHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            899999999999976532 346899999987665443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.70  E-value=1.2e-17  Score=148.14  Aligned_cols=201  Identities=12%  Similarity=0.140  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++..    .+.......+.++.+|   .++++++++
T Consensus         6 ~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            6 QGKVSLVT----GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE----EIANKYGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH----HHHhhcCCceEEEEccCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999997643321100    0000012245566666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCcEEEEeccccc-cCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGI-YKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~~~~  199 (349)
                      ..     ++|+|||+|+.                    |+.++    +.+++.+++.+.++||++||... ++....   
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~---  154 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQ---  154 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTC---
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCC---
Confidence            22     47999999983                    33445    44455556667889999999754 432211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                           ..+..+|.+.+.+.+.       .+++++++|||.++++.... +...+...+....+.         ..+++++
T Consensus       155 -----~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~  219 (248)
T 2pnf_A          155 -----VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIPL---------GRFGSPE  219 (248)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT---------SSCBCHH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCCC---------CCccCHH
Confidence                 1123456665554432       37999999999999875432 112222222222221         2468999


Q ss_pred             HHHHHHHHHhcCCC-ccCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPE-AASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~-~~~~~~~~i~~~~  299 (349)
                      |+|++++.++.++. ...|++|++.+|.
T Consensus       220 dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          220 EVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            99999999998653 2346899998873

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.70  E-value=2.6e-17  Score=147.49  Aligned_cols=207  Identities=11%  Similarity=0.148  Sum_probs=131.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce---ecCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+.       ..++   ...++.++.+|   .+++++
T Consensus        13 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~Dl~~~~~~~~   81 (265)
T 1h5q_A           13 VNKTIIVT----GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV-------TEKVGKEFGVKTKAYQCDVSNTDIVTK   81 (265)
T ss_dssp             TTEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH-------HHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHH-------HHHHHHhcCCeeEEEEeeCCCHHHHHH
Confidence            46899999    9999999999999999999999999976433211       1111   12345666676   555655


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CC-CcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~g-v~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|+|||+||.                    |+.++.++++++..    .+ .++||++||...+.....
T Consensus        82 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  161 (265)
T 1h5q_A           82 TIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS  161 (265)
T ss_dssp             HHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc
Confidence            55432     38999999984                    34556666665533    23 479999999776543211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      ..........|..+|.+++.+.+.       .+++++++|||+++++..... ...+...+....++         ..++
T Consensus       162 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~  231 (265)
T 1h5q_A          162 SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIPL---------NRFA  231 (265)
T ss_dssp             ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCTT---------SSCB
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCcc---------cCCC
Confidence            000000011123456665555433       389999999999998754321 12222233222221         2367


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +.+|+|++++.++.++.. ..|++|++.+|..
T Consensus       232 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          232 QPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence            899999999999987543 4568999998853

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.70  E-value=1.1e-17  Score=148.92  Aligned_cols=201  Identities=15%  Similarity=0.148  Sum_probs=131.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++. ..++.++.+|   .+++.+++
T Consensus         5 ~~k~vlVt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (251)
T 1zk4_A            5 DGKVAIIT----GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA-------KSVGTPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCcEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHhhccCceEEEECCCCCHHHHHHHH
Confidence            46889999    99999999999999999999999999864332111       0110 0245666676   55666666


Q ss_pred             cCC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCC-cEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGV-KQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|+|||+|+.                    |+.    .++.+++.+++.+. ++||++||...+.....  
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  151 (251)
T 1zk4_A           74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--  151 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC--
Confidence            542     37999999983                    122    34556667777777 89999999876653211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH---------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                           ...|..+|.+++.+.+         ..+++++++|||+++++..... ......... ..       ......++
T Consensus       152 -----~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~-~~-------~~~~~~~~  217 (251)
T 1zk4_A          152 -----LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAMSQ-RT-------KTPMGHIG  217 (251)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHHTS-TT-------TCTTSSCB
T ss_pred             -----CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhHHH-hh-------cCCCCCCc
Confidence                 1122345666555443         3478999999999988643211 000011100 00       11113478


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|..
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          218 EPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            999999999999987543 3568999998853

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.70  E-value=1.8e-17  Score=148.00  Aligned_cols=201  Identities=12%  Similarity=0.061  Sum_probs=122.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC--
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~--  151 (349)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.+....               .+..+..|.++++++++..  
T Consensus         1 mk~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~Dl~~~~~v~~~~~~~~~   61 (257)
T 1fjh_A            1 MSIIVIS----GCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------DLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------ccccCCCCHHHHHHHHHHhCC
Confidence            5789999    999999999999999999999999998754321               1233334577788888765  


Q ss_pred             CccEEEeCCCC-------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCCC------------
Q 018900          152 TFDVVLDNNGK-------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG------------  202 (349)
Q Consensus       152 ~~d~Vi~~a~~-------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e~------------  202 (349)
                      ++|+|||+||.             |+.++.++++++    ++.+..+||++||...+......+..+.            
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             CCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            48999999984             344555555554    4566789999999887732111110000            


Q ss_pred             -----CC----CCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          203 -----DV----VKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       203 -----~~----~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                           .+    ..|..+|.+++.+.+.       .++++.+++||.+.++.................-  ..     ...
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-----~~~  214 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF--VP-----PMG  214 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C--CC-----STT
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhc--cc-----ccC
Confidence                 00    1122345555544432       3899999999999887533210000111111100  00     112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      .+++.+|+|++++.++.++.. ..|+.+++.+|..
T Consensus       215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            367999999999999987643 4568999988753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.69  E-value=5e-17  Score=145.89  Aligned_cols=200  Identities=18%  Similarity=0.182  Sum_probs=128.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++. .++.++.+|   .++++++++
T Consensus        11 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~-~~~~~~~~D~~d~~~v~~~~~   78 (263)
T 3ak4_A           11 SGRKAIVT----GGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV-------AGLE-NGGFAVEVDVTKRASVDAAMQ   78 (263)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTCT-TCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHh-cCCeEEEEeCCCHHHHHHHHH
Confidence            46799999    99999999999999999999999999864432211       0111 145556666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+ ..+||++||...+.....   
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  155 (263)
T 3ak4_A           79 KAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPL---  155 (263)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCC---
Confidence            32     47999999983                    334444555544    4445 679999999776532110   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-----h-----HHHHHHHHhCCCcccCCCC
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-----E-----EWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~  262 (349)
                          ...|..+|.+++.+.+.       .|+++.++|||.++++......     .     ......+....+       
T Consensus       156 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------  224 (263)
T 3ak4_A          156 ----LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP-------  224 (263)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT-------
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC-------
Confidence                11223456655554432       3899999999999876421100     0     111111212111       


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                        ...+++.+|+|++++.++.++.. ..|++|++.+|..
T Consensus       225 --~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          225 --LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             --TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             --CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence              13478999999999999987533 4568999998854

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.69  E-value=2.4e-16  Score=140.12  Aligned_cols=201  Identities=17%  Similarity=0.136  Sum_probs=131.1

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ...+++||||    ||+|+||++++++|+++|++|++++|+.+...++.        +.....+.++.+|   .+++.++
T Consensus        11 ~~~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~   78 (249)
T 3f9i_A           11 DLTGKTSLIT----GASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG--------NALKDNYTIEVCNLANKEECSNL   78 (249)
T ss_dssp             CCTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCSSEEEEECCTTSHHHHHHH
T ss_pred             cCCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhccCccEEEcCCCCHHHHHHH
Confidence            4467899999    99999999999999999999999999865443211        1112345666666   6677777


Q ss_pred             hcCC-CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCCC
Q 018900          148 VGGV-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       148 ~~~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      ++.. ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....      
T Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  152 (249)
T 3f9i_A           79 ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG------  152 (249)
T ss_dssp             HHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC------
Confidence            7765 48999999993                    344555555544    4556679999999776543211      


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                       ...|..+|.+.+.+.+.       .++++.+++||.+..+..... .......+..+.+         ...+.+++|+|
T Consensus       153 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva  221 (249)
T 3f9i_A          153 -QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL-NEKQREAIVQKIP---------LGTYGIPEDVA  221 (249)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C-CHHHHHHHHHHCT---------TCSCBCHHHHH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc-CHHHHHHHHhcCC---------CCCCcCHHHHH
Confidence             11123355554444332       389999999999988754321 2222333333222         13467899999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++++.++.++.. ..|+++++.+|..
T Consensus       222 ~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          222 YAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHcCCccCCccCcEEEECCCEe
Confidence            999999987644 4569999998853

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.69  E-value=9.4e-18  Score=148.65  Aligned_cols=197  Identities=13%  Similarity=0.155  Sum_probs=127.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCccccee--cCCCeE-EEcC---hhhHHh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKT-VWGD---PAEVGN  146 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~--~~~~~~-~~~D---~~~l~~  146 (349)
                      ||+||||    ||+|+||++++++|+++|++|+++ +|+.+...++.       .++.  ..++.. +.+|   .+++++
T Consensus         1 ~k~vlIT----GasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (245)
T 2ph3_A            1 MRKALIT----GASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA-------EEARRRGSPLVAVLGANLLEAEAATA   69 (245)
T ss_dssp             CCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH-------HHHHHTTCSCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCceEEEEeccCCCHHHHHH
Confidence            4789999    999999999999999999999998 77654332110       1111  123344 5566   555665


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccc-cCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGI-YKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~  196 (349)
                      +++..     ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||... ++... 
T Consensus        70 ~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  148 (245)
T 2ph3_A           70 LVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG-  148 (245)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-
Confidence            55421     47999999983                    2334    566666777778889999999754 33211 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...+..+|.+.+.+.+.       .+++++++|||.++++.... ....+...+....+         ...++
T Consensus       149 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~  211 (245)
T 2ph3_A          149 -------QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFG  211 (245)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCB
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCc
Confidence                   11123356555444432       28999999999998864321 11222333333222         13468


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++|+|++++.++.++.. ..|++|++.+|.
T Consensus       212 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          212 RPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            999999999999987533 346899998874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.69  E-value=4.3e-17  Score=144.61  Aligned_cols=198  Identities=14%  Similarity=0.203  Sum_probs=122.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|+++|++|+++ .|+.+..+++.       .++.  ..++.++.+|   .+++++
T Consensus         4 ~~~~vlIt----GasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T 2hq1_A            4 KGKTAIVT----GSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-------EEFKAAGINVVVAKGDVKNPEDVEN   72 (247)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-------HHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHH
Confidence            45789999    999999999999999999999999 45543322110       1111  1245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccc-cccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSA-GIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~-~vy~~~~~  196 (349)
                      +++..     ++|+|||+||.                    |+.++.+++++    +++.+.++||++||. +.|+....
T Consensus        73 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  152 (247)
T 2hq1_A           73 MVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ  152 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------C
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC
Confidence            66532     47999999983                    34454444444    445577899999996 45543211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                              ..|..+|.+++.+.+.       .++++.+++||.+.++.... ....+...+..+.+         ...++
T Consensus       153 --------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~  214 (247)
T 2hq1_A          153 --------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNIP---------LKRFG  214 (247)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTST---------TSSCB
T ss_pred             --------cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhCC---------CCCCC
Confidence                    1123456665555443       28899999999987653211 11122222322222         13468


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++|+|++++.++.++.. ..|++|++.+|.
T Consensus       215 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          215 TPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            999999999999876533 356899999875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.68  E-value=9e-17  Score=143.98  Aligned_cols=209  Identities=15%  Similarity=0.220  Sum_probs=128.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee----cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.    ..++.++.+|   +++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~v~   74 (260)
T 2z1n_A            6 QGKLAVVT----AGSSGLGFASALELARNGARLLLFSRNREKLEAAA-------SRIASLVSGAQVDIVAGDIREPGDID   74 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHSTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCCCeEEEEEccCCCHHHHH
Confidence            46789999    99999999999999999999999999864332211       1111    1145566666   56666


Q ss_pred             hhhc----CCCccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          146 NVVG----GVTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       146 ~~~~----~~~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++++    ..++|+|||+||.                    |+.++    +.++..+++.+.++||++||...+..... 
T Consensus        75 ~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  153 (260)
T 2z1n_A           75 RLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD-  153 (260)
T ss_dssp             HHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC-
Confidence            6654    2237999999983                    33333    55666666777889999999877643211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHH-HHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ...|..+|.+++.+.+       ..|+++.++|||+++++............ ..........+........+.
T Consensus       154 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (260)
T 2z1n_A          154 ------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVG  227 (260)
T ss_dssp             ------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCC
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCcc
Confidence                  1112234555444433       23899999999999988644110000000 000000000000001112367


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       228 ~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          228 KPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999999999986533 456899998874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.68  E-value=6.4e-17  Score=145.06  Aligned_cols=194  Identities=19%  Similarity=0.200  Sum_probs=129.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++ ...+.++.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   73 (260)
T 1nff_A            6 TGKVALVS----GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA-------AEL-ADAARYVHLDVTQPAQWKAAVD   73 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHT-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-hcCceEEEecCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999864432211       011 1124556666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhH----HHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++    +.++..+++.+..+||++||...+.....    
T Consensus        74 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  149 (260)
T 1nff_A           74 TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA----  149 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCC----
Confidence            22     47999999983                    23333    55666677777889999999876543211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+.       .|++++++|||+++++....           ....+.  .  .....+++.+|
T Consensus       150 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~--~--~~~~~~~~~~d  211 (260)
T 1nff_A          150 ---CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW-----------VPEDIF--Q--TALGRAAEPVE  211 (260)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT-----------SCTTCS--C--CSSSSCBCHHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc-----------chhhHH--h--CccCCCCCHHH
Confidence               11223456665554432       48999999999999875320           001110  0  11134688999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +|++++.++.++.. ..|++|++.+|..
T Consensus       212 vA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          212 VSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCccccCCcCCEEEECCCee
Confidence            99999999976543 3468999998853

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.68  E-value=3.9e-18  Score=147.22  Aligned_cols=170  Identities=14%  Similarity=0.110  Sum_probs=118.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC-
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~-  150 (349)
                      |+||||    ||+|+||++++++|+++  +|++++|+.+...++.       .++.  . +++.+|   ++++.++++. 
T Consensus         1 k~vlVt----Gasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~-------~~~~--~-~~~~~D~~~~~~~~~~~~~~   64 (207)
T 2yut_A            1 MRVLIT----GATGGLGGAFARALKGH--DLLLSGRRAGALAELA-------REVG--A-RALPADLADELEAKALLEEA   64 (207)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH-------HHHT--C-EECCCCTTSHHHHHHHHHHH
T ss_pred             CEEEEE----cCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH-------Hhcc--C-cEEEeeCCCHHHHHHHHHhc
Confidence            579999    99999999999999998  9999999764332211       0110  1 344444   6777777762 


Q ss_pred             CCccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 018900          151 VTFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~  210 (349)
                      .++|+|||++|.                    |+.++.++++++++.+.++||++||...|.....       ...+..+
T Consensus        65 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~-------~~~Y~~s  137 (207)
T 2yut_A           65 GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG-------FAAYAAA  137 (207)
T ss_dssp             CSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT-------BHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-------cchHHHH
Confidence            137999999983                    4567778888887777789999999887753211       1112345


Q ss_pred             hHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          211 HVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       211 k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      |..++.+++.       .+++++++|||.++++...                    +.+.....+++++|+|++++.+++
T Consensus       138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~--------------------~~~~~~~~~~~~~dva~~~~~~~~  197 (207)
T 2yut_A          138 KGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA--------------------PLGGPPKGALSPEEAARKVLEGLF  197 (207)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG--------------------GGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc--------------------ccCCCCCCCCCHHHHHHHHHHHHh
Confidence            6666665543       4899999999999886411                    111223568999999999999998


Q ss_pred             CCCc
Q 018900          284 NPEA  287 (349)
Q Consensus       284 ~~~~  287 (349)
                      ++..
T Consensus       198 ~~~~  201 (207)
T 2yut_A          198 REPV  201 (207)
T ss_dssp             --CC
T ss_pred             CCCC
Confidence            8765

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=1.1e-16  Score=143.18  Aligned_cols=204  Identities=14%  Similarity=0.103  Sum_probs=128.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+. .+..       .++.  . .++.+|   .++++++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~-------~~~~--~-~~~~~D~~~~~~~~~~~~   69 (256)
T 2d1y_A            5 AGKGVLVT----GGARGIGRAIAQAFAREGALVALCDLRPEG-KEVA-------EAIG--G-AFFQVDLEDERERVRFVE   69 (256)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHH-------HHHT--C-EEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHH-------HHhh--C-CEEEeeCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754 2211       1111  2 455555   566666655


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++.+++++    +++.+..+||++||...+....     
T Consensus        70 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  144 (256)
T 2d1y_A           70 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ-----  144 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-----
Confidence            32     47999999983                    34455555554    4556778999999976543211     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHH-hCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  272 (349)
                        ....|..+|.+++.+.+.       .++++.+++||.+..+..     ..++.... .......+........+++++
T Consensus       145 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (256)
T 2d1y_A          145 --ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV-----LEAIALSPDPERTRRDWEDLHALRRLGKPE  217 (256)
T ss_dssp             --TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----HHHHC--------CHHHHTTSTTSSCBCHH
T ss_pred             --CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh-----hhccccccCCHHHHHHHHhcCCCCCCcCHH
Confidence              011223456665554432       389999999999876421     11100000 111111111111224578999


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                      |+|++++.++.++.. ..|++|++.+|..+++
T Consensus       218 dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          218 EVAEAVLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            999999999987643 4568999999875544

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.68  E-value=1.2e-15  Score=135.90  Aligned_cols=200  Identities=13%  Similarity=0.084  Sum_probs=120.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..            +   .++..+.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~------------~---~~~~~~~~D~~d~~~~~~~~~   66 (250)
T 2fwm_X            6 SGKNVWVT----GAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------Q---YPFATEVMDVADAAQVAQVCQ   66 (250)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCCCSS------------C---CSSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCchhhh------------c---CCceEEEcCCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999986421            0   124555565   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....    
T Consensus        67 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  142 (250)
T 2fwm_X           67 RLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIG----  142 (250)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCC----
Confidence            32     47999999983                    344555555555    5667789999999876543211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-HHHHH-HHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFD-RIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ...|..+|.+++.+.+.       .++++.++|||.++++....... ..+.. .+....  ..+........+.+.
T Consensus       143 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~p  217 (250)
T 2fwm_X          143 ---MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG--EQFKLGIPLGKIARP  217 (250)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CH
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhh--hcccccCCCCCCcCH
Confidence               11123456665554432       38999999999999875332100 00000 110000  000000111236799


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +|+|++++.++.++.. ..|+++++.+|..
T Consensus       218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          218 QEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999999987543 4568999998854

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.68  E-value=5.4e-16  Score=138.46  Aligned_cols=199  Identities=17%  Similarity=0.142  Sum_probs=129.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++ ...+.++.+|   +++++++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~   71 (254)
T 1hdc_A            4 SGKTVIIT----GGARGLGAEAARQAVAAGARVVLADVLDEEGAATA-------REL-GDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HTT-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCceeEEEecCCCHHHHHHHHH
Confidence            46889999    99999999999999999999999999865433211       111 1234555666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.+    ++.++..+++.+..+||++||...+.....    
T Consensus        72 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  147 (254)
T 1hdc_A           72 YAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC----
Confidence            22     47999999983                    2223    346677777777889999999876543211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee-eHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA-HVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~  272 (349)
                         ...|..+|.+++.+.+.       .++++.++|||+++++.         .... ................+. +.+
T Consensus       148 ---~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---------~~~~-~~~~~~~~~~~~p~~~~~~~~~  214 (254)
T 1hdc_A          148 ---TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM---------TAET-GIRQGEGNYPNTPMGRVGNEPG  214 (254)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHH-TCCCSTTSCTTSTTSSCB-CHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc---------cccc-chhHHHHHHhcCCCCCCCCCHH
Confidence               11123456555544432       38999999999998753         1111 111101011111112367 899


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      |+|++++.++.++.. ..|+++++.+|..
T Consensus       215 dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          215 EIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            999999999986543 4568999998853

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=1.1e-16  Score=142.20  Aligned_cols=198  Identities=11%  Similarity=0.097  Sum_probs=129.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.        ++  .++.++.+|   +++++++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~--~~~~~~~~D~~~~~~~~~~~~   70 (246)
T 2ag5_A            5 DGKVIILT----AAAQGIGQAAALAFAREGAKVIATDINESKLQELE--------KY--PGIQTRVLDVTKKKQIDQFAN   70 (246)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG--------GS--TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------hc--cCceEEEeeCCCHHHHHHHHH
Confidence            46889999    99999999999999999999999999865443221        11  145566666   566666655


Q ss_pred             CC-CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      .. ++|+|||+||.                    |+.++.+++++    +++.+..++|++||...+....      ...
T Consensus        71 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------~~~  144 (246)
T 2ag5_A           71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV------VNR  144 (246)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC------TTB
T ss_pred             HhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC------CCC
Confidence            43 48999999983                    33444455554    4455678999999976543211      011


Q ss_pred             CCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-----hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          205 VKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      ..|..+|.+++.+.+.       .+++++++|||+++++......     .......+....+.         ..+.+.+
T Consensus       145 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  215 (246)
T 2ag5_A          145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAE  215 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC---------CCCCCHH
Confidence            1233456665555443       3899999999999987421100     01112222222111         2367999


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.++.. ..|+++++.+|.
T Consensus       216 dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          216 EIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999999976543 456899998874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.68  E-value=4e-17  Score=145.58  Aligned_cols=199  Identities=14%  Similarity=0.170  Sum_probs=130.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC-CCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~-~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+ .+..+++.       .++.  ..++.++.+|   ++++++
T Consensus         6 ~~k~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   74 (258)
T 3afn_B            6 KGKRVLIT----GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI-------ASMRADGGDAAFFAADLATSEACQQ   74 (258)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH-------HHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH-------HHHHhcCCceEEEECCCCCHHHHHH
Confidence            46789999    999999999999999999999999998 54332110       1111  1245666676   566666


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCC--C---cEEEEecccccc
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG--V---KQFLFISSAGIY  191 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~g--v---~~~i~~Ss~~vy  191 (349)
                      +++..     ++|+|||+|+.                     |+.++.++++++    ++.+  .   .+||++||...+
T Consensus        75 ~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  154 (258)
T 3afn_B           75 LVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGH  154 (258)
T ss_dssp             HHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhc
Confidence            66532     47999999984                     233444444433    3322  2   699999997665


Q ss_pred             C-CCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC
Q 018900          192 K-PADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       192 ~-~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      . ...       ....|..+|..++.+.+.       .+++++++|||.++++.... ....+...+..+.++       
T Consensus       155 ~~~~~-------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~-------  219 (258)
T 3afn_B          155 TGGGP-------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-KTQDVRDRISNGIPM-------  219 (258)
T ss_dssp             HCCCT-------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-CCHHHHHHHHTTCTT-------
T ss_pred             cCCCC-------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc-cCHHHHHHHhccCCC-------
Confidence            4 211       011223456666655443       28999999999999886433 123334444433321       


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc--cCCCEEEeeCCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNLVSDR  299 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~~~i~~~~  299 (349)
                        ..+++++|+|++++.++.++..  ..|++|++.+|.
T Consensus       220 --~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          220 --GRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             --CSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             --CcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence              3578999999999999976532  346899999875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.67  E-value=1.3e-16  Score=144.71  Aligned_cols=213  Identities=16%  Similarity=0.163  Sum_probs=127.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+. +..+++..    .........+.++.+|   .++++++
T Consensus        23 l~~k~~lVT----Gas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           23 MMTKTAVIT----GSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD----EVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHH----HHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHH----HHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            456899999    9999999999999999999999999954 22211100    0001112345556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....  
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  172 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF--  172 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC--
Confidence            5532     48999999993                    445556666654    5667789999999765433211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHH-HHHhCCC-cccCCCCCcceeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRP-VPIPGSGMQFTNIA  269 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~i  269 (349)
                           ...|..+|.+++.+.+.       .|+++..++||.+.++............ ....... ...+.++.....++
T Consensus       173 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  247 (281)
T 3v2h_A          173 -----KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI  247 (281)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCB
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCcc
Confidence                 11223355555444332       3899999999999887543211000000 0000000 01122333445689


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++|+|++++.++.++.. ..|+++++.+|.
T Consensus       248 ~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          248 TVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             CHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            999999999999987654 457999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.67  E-value=3.8e-16  Score=138.79  Aligned_cols=199  Identities=16%  Similarity=0.200  Sum_probs=133.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|.. +..+++.       .++.  ..++..+.+|   .+++++
T Consensus         3 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~d~~~v~~   71 (246)
T 3osu_A            3 MTKSALVT----GASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVV-------EEIKAKGVDSFAIQANVADADEVKA   71 (246)
T ss_dssp             CSCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHH
Confidence            46789999    9999999999999999999999998854 2221110       1111  1234556666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+....+ 
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  150 (246)
T 3osu_A           72 MIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG-  150 (246)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC-
Confidence            66533     47999999993                    455666777766    6667789999999765432211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+.+.+.+       ..|+++..++||.+.++.... ....+...+..+.++         ..+.+
T Consensus       151 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~  214 (246)
T 3osu_A          151 ------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQ  214 (246)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBC
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcC
Confidence                  1112335555544433       238999999999999886543 334445555544443         23567


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.++.. .+|++|++.+|.
T Consensus       215 ~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          215 DTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            89999999999987644 456999999885

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.67  E-value=7.4e-17  Score=144.72  Aligned_cols=206  Identities=16%  Similarity=0.152  Sum_probs=131.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|..+...+....   .. ......+.++.+|   .+++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~Dl~~~~~v~~~~~   77 (264)
T 3i4f_A            6 FVRHALIT----AGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKE---TY-KDVEERLQFVQADVTKKEDLHKIVE   77 (264)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH---HT-GGGGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCEEEEe----CCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH---HH-HhcCCceEEEEecCCCHHHHHHHHH
Confidence            56889999    9999999999999999999999998875332110000   00 0012346667777   566666665


Q ss_pred             CC-----CccEEEeCCCC----------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ..     ++|+|||+||.                      |+.++.++++++    ++.+..+||++||.+.++..... 
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-  156 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI-  156 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCT-
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCC-
Confidence            33     58999999992                      344566666655    66677899999998654322111 


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....+..+|.+.+.+.+    +   .|+++..++||.++++..... ............         ....+.+.
T Consensus       157 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------p~~r~~~~  222 (264)
T 3i4f_A          157 ----YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHNT---------PIGRSGTG  222 (264)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCH
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhcC---------CCCCCcCH
Confidence                01112335555544433    2   489999999999998865432 222211111111         12346789


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|+|++++.++.++.. ..|+++++.+|...
T Consensus       223 ~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          223 EDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             HHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            9999999999987643 45799999988543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.67  E-value=1.1e-15  Score=136.60  Aligned_cols=201  Identities=11%  Similarity=0.096  Sum_probs=124.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++....       + ...+.++.+|   .+++.++++
T Consensus         6 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~Dv~~~~~v~~~~~   73 (257)
T 3tpc_A            6 KSRVFIVT----GASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-------L-GAAVRFRNADVTNEADATAALA   73 (257)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-------h-CCceEEEEccCCCHHHHHHHHH
Confidence            46789999    9999999999999999999999999988655433211       1 2345666666   566666665


Q ss_pred             CC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHh----C------CCcEEEEeccccc
Q 018900          150 GV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKS----S------GVKQFLFISSAGI  190 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~----~------gv~~~i~~Ss~~v  190 (349)
                      ..     ++|++||+||.                        |+.++.++++++..    .      +..+||++||...
T Consensus        74 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           74 FAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence            32     47999999983                        23455555555543    2      4568999999776


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      +.....       ...|..+|.+++.+.+    |   .|+++..++||.+..+..... ...+...+....+  .+    
T Consensus       154 ~~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~p--~~----  219 (257)
T 3tpc_A          154 FDGQIG-------QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM-PQDVQDALAASVP--FP----  219 (257)
T ss_dssp             HHCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSS--SS----
T ss_pred             ccCCCC-------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC-CHHHHHHHHhcCC--CC----
Confidence            543211       1112345655544432    2   489999999999988754321 1111111111111  10    


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                        ..+.+.+|+|++++.++++. ..+|+++++.+|..++
T Consensus       220 --~r~~~~~dva~~v~~l~s~~-~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          220 --PRLGRAEEYAALVKHICENT-MLNGEVIRLDGALRMA  255 (257)
T ss_dssp             --CSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTTCCC-
T ss_pred             --CCCCCHHHHHHHHHHHcccC-CcCCcEEEECCCccCC
Confidence              24678999999999999873 4456999999986554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.67  E-value=1.2e-16  Score=142.78  Aligned_cols=204  Identities=14%  Similarity=0.106  Sum_probs=129.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+  .+.       ..++.  ..++.++.+|   .+++.++
T Consensus         3 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~-------~~~l~~~~~~~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            3 KGKTALVT----GSTSGIGLGIAQVLARAGANIVLNGFGDP--APA-------LAEIARHGVKAVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHH-------HHHHHTTSCCEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHH-------HHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            46889999    99999999999999999999999999764  110       01111  1234455555   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.    .++.++..+++.+..+||++||...+.....  
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  147 (255)
T 2q2v_A           70 FALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG--  147 (255)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC--
Confidence            6532     47999999983                    122    3556666777888889999999876543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc----ccC-CCCCcce
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV----PIP-GSGMQFT  266 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~  266 (349)
                           ...|..+|.+++.+.+.       .++++.++|||.++++.... .... ....  +...    ..+ .......
T Consensus       148 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~-~~~~--~~~~~~~~~~~~~~~~p~~  218 (255)
T 2q2v_A          148 -----KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK-QIDD-RAAN--GGDPLQAQHDLLAEKQPSL  218 (255)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH-HHHH-HHHH--TCCHHHHHHHHHTTTCTTC
T ss_pred             -----chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh-hccc-cccc--ccchHHHHHHHHhccCCCC
Confidence                 11223456555544432       37899999999998864211 0000 0000  0000    000 1111224


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      .+++++|+|++++.++.++.. ..|++|++.+|..
T Consensus       219 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          219 AFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence            578999999999999876543 3568999998753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.67  E-value=3.3e-17  Score=150.05  Aligned_cols=210  Identities=17%  Similarity=0.158  Sum_probs=130.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+...+...............++.++.+|   .+++.+++
T Consensus        16 l~~k~vlVT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           16 LQGQVAIVT----GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999864332110000000000012345666776   56666666


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.++.++++++..    .+..+||++||...++...    
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  167 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPL----  167 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCc----
Confidence            542     47999999982                    45667788877644    2357899999977322111    


Q ss_pred             CCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCc---hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                          ...+..+|.+.+.+.+    +   .|++++++|||+++++......   ...+...+....         ....++
T Consensus       168 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~  234 (303)
T 1yxm_A          168 ----AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI---------PAKRIG  234 (303)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS---------TTSSCB
T ss_pred             ----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC---------cccCCC
Confidence                0112234444433332    2   3899999999999998421111   011111111111         112368


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      +.+|+|++++.++.++.. .+|+++++.+|..++
T Consensus       235 ~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          235 VPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             CTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            899999999999976543 456899999986543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.67  E-value=6.4e-16  Score=137.59  Aligned_cols=194  Identities=15%  Similarity=0.182  Sum_probs=129.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh-hhHHhhhc
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AEVGNVVG  149 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-~~l~~~~~  149 (349)
                      ..++|+||||    ||+|+||++++++|+++|++|++++|+.+...+           +  ..+.++ +|. ++++.+++
T Consensus        16 ~~~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~--~~~~~~-~D~~~~~~~~~~   77 (249)
T 1o5i_A           16 GIRDKGVLVL----AASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------S--GHRYVV-CDLRKDLDLLFE   77 (249)
T ss_dssp             CCTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------T--CSEEEE-CCTTTCHHHHHH
T ss_pred             ccCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh-----------h--CCeEEE-eeHHHHHHHHHH
Confidence            3467899999    999999999999999999999999998632221           1  123344 663 45666655


Q ss_pred             CC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      .. ++|+|||+||.                    |+.+    ++.++..+++.+.++||++||...|.....       .
T Consensus        78 ~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~  150 (249)
T 1o5i_A           78 KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN-------L  150 (249)
T ss_dssp             HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------B
T ss_pred             HhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC-------C
Confidence            44 58999999983                    2222    446677777778889999999887653211       1


Q ss_pred             CCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHH-HHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          205 VKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      ..+..+|.+++.+.+       ..|+++.++|||.+.++.... ....+.. .+....+         ...+++.+|+|+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~p---------~~~~~~~~dvA~  220 (249)
T 1o5i_A          151 YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIP---------MRRMAKPEEIAS  220 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTST---------TSSCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcCC---------CCCCcCHHHHHH
Confidence            112235555544432       248999999999998875311 0011112 2222211         124679999999


Q ss_pred             HHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          277 MLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++.++.++.. ..|++|++.+|.
T Consensus       221 ~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          221 VVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHcCccccCCCCCEEEECCCc
Confidence            99999876543 456899999885

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.66  E-value=2.1e-17  Score=148.02  Aligned_cols=203  Identities=13%  Similarity=0.155  Sum_probs=130.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.  ...+..+.+|   .++++++
T Consensus        13 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~~   81 (260)
T 2zat_A           13 ENKVALVT----ASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV-------ATLQGEGLSVTGTVCHVGKAEDRERL   81 (260)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHH
Confidence            46899999    99999999999999999999999999864332110       1111  1234555666   5566665


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||+||.                     |+.++.++++    .+++.+.++||++||...|..... 
T Consensus        82 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  160 (260)
T 2zat_A           82 VAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN-  160 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC-
Confidence            5422     47999999984                     2334444444    455677889999999887653211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ...|..+|.+++.+.+.       .++++.+++||.+..+....... ......+....         ....+.
T Consensus       161 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~  225 (260)
T 2zat_A          161 ------LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESL---------RIRRLG  225 (260)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHH---------TCSSCB
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcC---------CCCCCC
Confidence                  11123456665554433       38999999999998764321000 00011111111         112467


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|..++
T Consensus       226 ~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          226 NPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             CGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            999999999999876543 356899999987655

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.66  E-value=2.3e-16  Score=141.29  Aligned_cols=202  Identities=14%  Similarity=0.154  Sum_probs=130.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.  ..++.++.+|   +++++++
T Consensus         8 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (260)
T 2ae2_A            8 EGCTALVT----GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-------TQWRSKGFKVEASVCDLSSRSERQEL   76 (260)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999864432210       1111  1234556666   5566666


Q ss_pred             hcC------CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~------~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++.      .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+..... 
T Consensus        77 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  155 (260)
T 2ae2_A           77 MNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY-  155 (260)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC-
Confidence            532      248999999983                    344555666655    5667789999999776542211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHH---HHHhCCCcccCCCCCcce
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFD---RIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~  266 (349)
                            ...|..+|.+++.+.+.       .++++.+++||.+..+...... ......   .+....+         ..
T Consensus       156 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~  220 (260)
T 2ae2_A          156 ------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA---------LR  220 (260)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST---------TC
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC---------CC
Confidence                  11233456666555443       2899999999999775311000 000111   2222211         13


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+++.+|+|++++.++.++.. ..|+++++.+|..+
T Consensus       221 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          221 RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            478999999999999876533 45689999988644

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.66  E-value=9.2e-17  Score=146.57  Aligned_cols=204  Identities=16%  Similarity=0.189  Sum_probs=134.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+....    +.+.....+.++.+|   .+++++++
T Consensus        39 l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           39 LSARSVLVT----GGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE----LGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH----HTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            357899999    9999999999999999999999999987654332110    001111245566666   55555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEecccccc--CCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIY--KPADEP  197 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy--~~~~~~  197 (349)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+  +...  
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~--  188 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG--  188 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC--
Confidence            433     47999999993                    455666666655    56677899999996532  2111  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+++.+.+    |   .|+++..++||+++++.... ....+...+....++.         .+..
T Consensus       189 ------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~~---------r~~~  252 (293)
T 3rih_A          189 ------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPMG---------MLGS  252 (293)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTTS---------SCBC
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCCC---------CCCC
Confidence                  1122345555554443    2   48999999999998864321 1123344444443332         2457


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+|+|++++.++.+... ..|+++++.+|..+
T Consensus       253 p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          253 PVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            89999999999976543 45799999998654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.66  E-value=9.7e-16  Score=137.36  Aligned_cols=196  Identities=16%  Similarity=0.195  Sum_probs=124.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...          .++...++.++.+|   .+++.++++
T Consensus        26 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (260)
T 3gem_A           26 SSAPILIT----GASQRVGLHCALRLLEHGHRVIISYRTEHASV----------TELRQAGAVALYGDFSCETGIMAFID   91 (260)
T ss_dssp             -CCCEEES----STTSHHHHHHHHHHHHTTCCEEEEESSCCHHH----------HHHHHHTCEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------HHHHhcCCeEEECCCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999875432          12223356677777   555655554


Q ss_pred             CC-----CccEEEeCCCC-------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK-------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      ..     ++|+|||+||.                   |+.++.++++    .+++.+..+||++||...+.....     
T Consensus        92 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----  166 (260)
T 3gem_A           92 LLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK-----  166 (260)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS-----
T ss_pred             HHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC-----
Confidence            32     48999999993                   3444555555    445566789999999776543211     


Q ss_pred             CCCCCCCCChHHHHHHHH----hh--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          202 GDVVKPDAGHVQVEKYIS----EN--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                        ...|..+|.+++.+.+    |+  ++++..++||.+..+....   ..+...+....++         ..+.+.+|+|
T Consensus       167 --~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~---~~~~~~~~~~~p~---------~r~~~~edva  232 (260)
T 3gem_A          167 --HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD---AAYRANALAKSAL---------GIEPGAEVIY  232 (260)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHH
T ss_pred             --cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC---HHHHHHHHhcCCC---------CCCCCHHHHH
Confidence              1122345555544443    22  5899999999997764321   1112222222222         1245689999


Q ss_pred             HHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          276 SMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                      ++++.+++... ..|+++++.+|..+.
T Consensus       233 ~~v~~L~~~~~-itG~~i~vdGG~~~~  258 (260)
T 3gem_A          233 QSLRYLLDSTY-VTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HHHHHHHHCSS-CCSCEEEESTTTTTC
T ss_pred             HHHHHHhhCCC-CCCCEEEECCCcccC
Confidence            99999996443 346999999987554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.66  E-value=2e-16  Score=141.19  Aligned_cols=202  Identities=16%  Similarity=0.208  Sum_probs=129.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++ ..++.++.+|   .++++++++
T Consensus         5 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   72 (253)
T 1hxh_A            5 QGKVALVT----GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA-------AEL-GERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHH-CTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc-CCceEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999764332211       111 2245556666   566666654


Q ss_pred             CC-----CccEEEeCCCCC--------------------hh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGKN--------------------LD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~~--------------------~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||..                    +.    .++.++..+++.+ .+||++||...+.....    
T Consensus        73 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----  147 (253)
T 1hxh_A           73 AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCC----
Confidence            43     479999999941                    12    3456666777777 89999999876643211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------h--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ...|..+|.+++.+.+.       .  +++++++|||+++++....................     ......+.+.
T Consensus       148 ---~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~~~  219 (253)
T 1hxh_A          148 ---YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK-----LNRAGRAYMP  219 (253)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTT-----TBTTCCEECH
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhc-----cCccCCCCCH
Confidence               11233456665554433       3  89999999999988632100000000010000000     0111347899


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++.++.. ..|+++++.+|.
T Consensus       220 ~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          220 ERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            9999999999987643 456899998875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.66  E-value=1.9e-16  Score=143.79  Aligned_cols=199  Identities=17%  Similarity=0.220  Sum_probs=126.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ...+.++.+|   .++++++
T Consensus        43 ~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~d~~~v~~~  111 (285)
T 2c07_A           43 ENKVALVT----GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-------DEIKSFGYESSGYAGDVSKKEEISEV  111 (285)
T ss_dssp             SSCEEEEE----STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-------HHHHhcCCceeEEECCCCCHHHHHHH
Confidence            46789999    99999999999999999999999988754332110       1111  1235556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHH----HHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll----~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.+++    ..+++.+.++||++||...+.....  
T Consensus       112 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  189 (285)
T 2c07_A          112 INKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG--  189 (285)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC--
Confidence            5421     47999999983                    344544444    4445567789999999765432111  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...+..+|.+++.+.+.       .+++++++|||.+.++.... ....+...+....+.         ..++++
T Consensus       190 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~  254 (285)
T 2c07_A          190 -----QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPA---------GRMGTP  254 (285)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTT---------SSCBCH
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCCC---------CCCCCH
Confidence                 11123356655544332       38999999999998875432 122223333222211         236899


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++.++.. ..|+++++.+|.
T Consensus       255 ~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          255 EEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            9999999999987543 356899998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.66  E-value=2.8e-16  Score=139.25  Aligned_cols=189  Identities=14%  Similarity=0.137  Sum_probs=116.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|  ++|++++|+.+..+++..        +...++.++.+|   .+++.++
T Consensus         2 ~~k~vlIt----GasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~--------~~~~~~~~~~~D~~~~~~~~~~   69 (250)
T 1yo6_A            2 SPGSVVVT----GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS--------IKDSRVHVLPLTVTCDKSLDTF   69 (250)
T ss_dssp             CCSEEEES----SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT--------CCCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----cCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh--------ccCCceEEEEeecCCHHHHHHH
Confidence            36789999    999999999999999999  999999998755433211        112356667777   5566666


Q ss_pred             hcCC-------CccEEEeCCCC---------------------ChhhHHHHHHHH----HhC------C-----CcEEEE
Q 018900          148 VGGV-------TFDVVLDNNGK---------------------NLDAVRPVADWA----KSS------G-----VKQFLF  184 (349)
Q Consensus       148 ~~~~-------~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~------g-----v~~~i~  184 (349)
                      ++..       ++|+|||+||.                     |+.++.++++++    ++.      +     ..+||+
T Consensus        70 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  149 (250)
T 1yo6_A           70 VSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVIT  149 (250)
T ss_dssp             HHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEE
T ss_pred             HHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEE
Confidence            6522       47999999983                     233445555544    333      4     679999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcc
Q 018900          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (349)
Q Consensus       185 ~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~  257 (349)
                      +||...+.........+.....|..+|.+.+.+.+.       .++++.++|||++..+....                 
T Consensus       150 isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------  212 (250)
T 1yo6_A          150 ISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------  212 (250)
T ss_dssp             ECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------
T ss_pred             eccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------
Confidence            999765543211000000011122455555554432       28999999999987653210                 


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                              ..+++.+|+|+.++.++.++.. .+|+.+.+.++
T Consensus       213 --------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             --------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             --------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence                    1357899999999999988754 35566665543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.66  E-value=1.6e-16  Score=141.31  Aligned_cols=194  Identities=17%  Similarity=0.234  Sum_probs=124.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~-  151 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++           .  ++..+..|+++++++++.. 
T Consensus        14 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----------~--~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           14 VSRSVLVT----GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------F--GVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----------E--EEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----------c--CeeccCCCHHHHHHHHHHHH
Confidence            46889999    9999999999999999999999999987544321           1  1233334566676666532 


Q ss_pred             ----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCCCCC
Q 018900          152 ----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       152 ----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                          ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...+....       .
T Consensus        77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~  149 (247)
T 1uzm_A           77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-------N  149 (247)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------C
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC-------C
Confidence                47999999983                    3344445555    44556778999999975432211       0


Q ss_pred             CCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          204 VVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      ...|..+|.+++.+.+.       .|+++.+++||.+..+.... ........+....+         ...+++.+|+|+
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~dvA~  219 (247)
T 1uzm_A          150 QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIP---------AKRVGTPAEVAG  219 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCT---------TCSCBCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHH
Confidence            11123456655444432       48999999999987652110 01111111111111         123689999999


Q ss_pred             HHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          277 MLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +++.++.++.. ..|+++++.+|..
T Consensus       220 ~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          220 VVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHcCccccCCcCCEEEECCCcc
Confidence            99999976533 4568999998864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.66  E-value=1.6e-15  Score=138.11  Aligned_cols=224  Identities=13%  Similarity=0.042  Sum_probs=141.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+....       + ..++.++.+|   .+++++++
T Consensus        14 l~gk~vlVT----Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~Dl~d~~~v~~~~   81 (291)
T 3rd5_A           14 FAQRTVVIT----GANSGLGAVTARELARRGATVIMAVRDTRKGEAAART-------M-AGQVEVRELDLQDLSSVRRFA   81 (291)
T ss_dssp             CTTCEEEEE----CCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-------S-SSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------h-cCCeeEEEcCCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999987544332111       1 2345666666   67778888


Q ss_pred             cCC-CccEEEeCCCC------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCC-CCCCCCCCCCCC--
Q 018900          149 GGV-TFDVVLDNNGK------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVK--  206 (349)
Q Consensus       149 ~~~-~~d~Vi~~a~~------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~-~~~~~~e~~~~~--  206 (349)
                      +.. ++|+|||+||.                  |+.++.++++++.....+|||++||...+... ......++....  
T Consensus        82 ~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~  161 (291)
T 3rd5_A           82 DGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSP  161 (291)
T ss_dssp             HTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCH
T ss_pred             HhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCC
Confidence            766 58999999993                  56788899999988777899999998766432 111111111111  


Q ss_pred             ---CCCChHHHHHHHHh-------hC--CcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          207 ---PDAGHVQVEKYISE-------NF--SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       207 ---~~~~k~~~ek~~~~-------~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                         |..+|.+.+.+.+.       .+  +++..++||.+..+..... ...+...+ ...+        ..+-..+.+|+
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~-~~~~--------~~~~~~~~~~~  231 (291)
T 3rd5_A          162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDAL-MSAA--------TRVVATDADFG  231 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc-chHHHHHH-HHHH--------HHHHhCCHHHH
Confidence               12345554443332       25  8999999999976643321 00011111 1111        01123468999


Q ss_pred             HHHHHHHhcCCCccCCCEEEeeCCCc------------c---CHHHHHHHHHHHhCCCc
Q 018900          275 SSMLTLAVENPEAASSNIFNLVSDRA------------V---TLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~~~~~------------~---t~~el~~~~~~~~g~~~  318 (349)
                      |+.++.++.++ ..+|+.+++.+|..            .   ..+++++...+.+|...
T Consensus       232 A~~~~~l~~~~-~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~  289 (291)
T 3rd5_A          232 ARQTLYAASQD-LPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEF  289 (291)
T ss_dssp             HHHHHHHHHSC-CCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHcCC-CCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcccc
Confidence            99999999985 44568888765421            0   14466777777776543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.66  E-value=4.4e-16  Score=140.08  Aligned_cols=198  Identities=15%  Similarity=0.125  Sum_probs=129.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+.....        .     .+..+..|.+++..+++..
T Consensus        26 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~--------~-----~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           26 FEGKVALVT----GAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD--------L-----HLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS--------E-----ECCCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh--------h-----ccCcCCCCHHHHHHHHHHH
Confidence            356899999    9999999999999999999999999987544321        0     1122233455555554422


Q ss_pred             -----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCCC
Q 018900          152 -----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       152 -----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                           ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....      
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------  162 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG------  162 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT------
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC------
Confidence                 47999999993                    455666666655    6667789999999765532211      


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC------chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                       ...|..+|.+++.+.+.       .|+++..++||.+.++.....      ........+....         ....+.
T Consensus       163 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~  232 (266)
T 3uxy_A          163 -HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV---------PLGRIA  232 (266)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS---------TTSSCB
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC---------CCCCCc
Confidence             11123456555544432       389999999999987632100      0011112222221         123467


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      +.+|+|++++.++.++.. .+|+++++.+|..++
T Consensus       233 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          233 EPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            899999999999987643 457999999987543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.66  E-value=1.7e-16  Score=142.00  Aligned_cols=204  Identities=13%  Similarity=0.159  Sum_probs=133.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.  ...+.++.+|   .++++++
T Consensus        11 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~d~~~v~~~   79 (256)
T 3gaf_A           11 NDAVAIVT----GAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVA-------AAIRQAGGKAIGLECNVTDEQHREAV   79 (256)
T ss_dssp             TTCEEEEC----SCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            56899999    99999999999999999999999999865433211       1111  1245556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC-------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..     ++|++||+||.                   |+.++.+++++    +++.+..+||++||...+.....   
T Consensus        80 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  156 (256)
T 3gaf_A           80 IKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR---  156 (256)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC---
Confidence            5532     47999999983                   34455555555    45667789999999776543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+.       .|+++..++||.+..+.............+....++         ..+.+.+
T Consensus       157 ----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~  223 (256)
T 3gaf_A          157 ----MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL---------GRLGEAQ  223 (256)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT---------SSCBCHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC---------CCCCCHH
Confidence                11123455555544432       389999999999977532111111222333333221         3467899


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                      |+|++++.++.+... ..|+++++.+|...++
T Consensus       224 dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          224 DIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             HHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            999999999986543 4579999999876554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.65  E-value=1.2e-15  Score=138.11  Aligned_cols=220  Identities=12%  Similarity=0.075  Sum_probs=134.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCC-CCCCccc----cee--cCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-PPFNRFN----EIV--SAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~-~~~~~~~----~l~--~~~~~~~~~D---~  141 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|++........ .......    ++.  ...+.++.+|   .
T Consensus         8 l~~k~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            8 FEGKTALIT----GGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            356899999    999999999999999999999999997532110000 0000000    111  1245556666   5


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccC
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ++++++++..     ++|++||+||.                    |+.++.+++++    +++.+..+||++||...+.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            6666666532     47999999993                    45566666665    4555678999999977654


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc-----ccCC
Q 018900          193 PADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-----PIPG  260 (349)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-----~~~~  260 (349)
                      ....       ...|..+|.+++.+.+    |   .|+++..++||+++++..........+.........     .+..
T Consensus       164 ~~~~-------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (281)
T 3s55_A          164 ANFA-------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS  236 (281)
T ss_dssp             CCTT-------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHH
T ss_pred             CCCC-------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHh
Confidence            3221       1112345655544433    2   389999999999999875432110000000000000     0000


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .......+.+++|+|++++.++.++.. ..|+++++.+|..++
T Consensus       237 ~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          237 LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            111224678999999999999987644 456999999986543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.65  E-value=6e-16  Score=137.42  Aligned_cols=196  Identities=15%  Similarity=0.147  Sum_probs=128.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++..       ++   ++.++.+|   +++++++++
T Consensus         4 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~---~~~~~~~D~~~~~~~~~~~~   69 (245)
T 1uls_A            4 KDKAVLIT----GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-------AV---GAHPVVMDVADPASVERGFA   69 (245)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------TT---TCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hc---CCEEEEecCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998644332110       11   35566666   566666655


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++.++.+    .+++.+..+||++||...++...     
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  144 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG-----  144 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCC-----
Confidence            42     47999999993                    3344445544    44455678999999987444221     


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+       ..|+++.+++||.+..+.... ........+....+.         ..+++.+|
T Consensus       145 ---~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~~~d  211 (245)
T 1uls_A          145 ---QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPL---------GRAGKPLE  211 (245)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTT---------CSCBCHHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCCC---------CCCcCHHH
Confidence               1112234555444332       248999999999998775432 112222333332221         12678999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +|++++.++.++.. ..|+++++.+|..
T Consensus       212 vA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          212 VAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            99999999986543 4568999988753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.65  E-value=5.2e-17  Score=143.82  Aligned_cols=197  Identities=18%  Similarity=0.206  Sum_probs=125.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      +|+||||    ||+|+||++++++|+++|++|+++ .|+.+...++.       .++.  ...+.++.+|   .++++++
T Consensus         1 ~k~vlVT----GasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   69 (244)
T 1edo_A            1 SPVVVVT----GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-------KQIEAYGGQAITFGGDVSKEADVEAM   69 (244)
T ss_dssp             CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCcEEEEeCCCCCHHHHHHH
Confidence            3689999    999999999999999999999995 67653322110       0111  1235556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH----hCCCcEEEEecccccc-CCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIY-KPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~----~~gv~~~i~~Ss~~vy-~~~~~~  197 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++.    +.+..+||++||...+ +...  
T Consensus        70 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  147 (244)
T 1edo_A           70 MKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG--  147 (244)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC--
Confidence            6532     47999999983                    3445556666554    3467899999997543 3211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...+..+|...+.+.+.       .+++++++|||+++++.... ....+...+....+         ...+++
T Consensus       148 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~  211 (244)
T 1edo_A          148 ------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQ  211 (244)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBC
T ss_pred             ------CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCC
Confidence                  11122355554443332       38999999999998764221 11122222222221         124689


Q ss_pred             HHHHHHHHHHHhcCCC--ccCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPE--AASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~--~~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++..+.  ...|++|++.+|.
T Consensus       212 ~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          212 PENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            9999999999985543  2356899999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.65  E-value=1.4e-15  Score=137.23  Aligned_cols=201  Identities=16%  Similarity=0.209  Sum_probs=127.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.  ..++..+.+|   +++++++
T Consensus        20 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   88 (273)
T 1ae1_A           20 KGTTALVT----GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-------EIWREKGLNVEGSVCDLLSRTERDKL   88 (273)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEECCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999864332210       1111  1245556666   5556555


Q ss_pred             hcC------CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~------~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++.      .++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+..... 
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-  167 (273)
T 1ae1_A           89 MQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS-  167 (273)
T ss_dssp             HHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC-
Confidence            532      248999999983                    344555566554    4556789999999877653211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-----hHHHHHHHHhCCCcccCCCCCcc
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                            ...|..+|.+++.+.+.       .|+++.+++||.++++......     ...+...+....++         
T Consensus       168 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------  232 (273)
T 1ae1_A          168 ------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------  232 (273)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------
T ss_pred             ------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC---------
Confidence                  11223456655544432       3899999999999987543210     01122222222221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ..+.+.+|+|++++.++.++.. ..|+++++.+|..
T Consensus       233 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          233 GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence            2367899999999999876533 3568999998853

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.65  E-value=5.3e-16  Score=138.78  Aligned_cols=201  Identities=15%  Similarity=0.133  Sum_probs=126.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++| +.+...++.       .++.  ...+.++.+|   .+++.+
T Consensus         6 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~l~~~~~~~~~~~~D~~~~~~~~~   74 (261)
T 1gee_A            6 EGKVVVIT----GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-------EEIKKVGGEAIAVKGDVTVESDVIN   74 (261)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-------HHHHhcCCceEEEECCCCCHHHHHH
Confidence            46799999    99999999999999999999999999 543222110       1111  1234566666   556666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCC-CcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSG-VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~g-v~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|+|||+|+.                    |+.++.++++    .+++.+ ..+||++||...+.....
T Consensus        75 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  154 (261)
T 1gee_A           75 LVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL  154 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCC
Confidence            65532     47999999983                    2334444444    445555 679999999765432110


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                             ...|..+|.+++.+.+.       .+++++++|||.++++...... ...+...+....+         ...+
T Consensus       155 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~  218 (261)
T 1gee_A          155 -------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYI  218 (261)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSC
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCC
Confidence                   11122355554444332       3899999999999987532100 0112222222211         1246


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++.+|+|++++.++.++.. ..|+++++.+|..
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          219 GEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            8999999999999976432 3568999998854

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.65  E-value=5.9e-16  Score=139.03  Aligned_cols=204  Identities=15%  Similarity=0.152  Sum_probs=126.3

Q ss_pred             ccceEEEEEecCCCccc-chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG-~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .++++||||    ||+| .||++++++|+++|++|++++|+.+...+...    .+.+....++.++.+|   .++++++
T Consensus        20 l~~k~vlIT----Gasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (266)
T 3o38_A           20 LKGKVVLVT----AAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD----QLADLGLGRVEAVVCDVTSTEAVDAL   91 (266)
T ss_dssp             TTTCEEEES----SCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTCSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH----HHHhcCCCceEEEEeCCCCHHHHHHH
Confidence            457899999    9998 59999999999999999999998754332110    0011112356677777   5566666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhC-CCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSS-GVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~-gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++. +..+||++||...+..... 
T Consensus        92 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  170 (266)
T 3o38_A           92 ITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS-  170 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT-
T ss_pred             HHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC-
Confidence            5533     58999999993                    344555555554    333 5678999999765432211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+.+.+.+.       .|+++..++||.+..+.........+...+..         ......+.+
T Consensus       171 ------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---------~~~~~r~~~  235 (266)
T 3o38_A          171 ------QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLAS---------DEAFGRAAE  235 (266)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCC
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHh---------cCCcCCCCC
Confidence                  11122355555544332       48999999999998765332111111111111         122234678


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.++.. ..|+++++.+|.
T Consensus       236 ~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          236 PWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            99999999999987543 457999999874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=8.2e-18  Score=151.35  Aligned_cols=212  Identities=15%  Similarity=0.166  Sum_probs=133.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+...+....    +.+ ....++.++.+|   +++++++++
T Consensus         7 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (267)
T 2gdz_A            7 GKVALVT----GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAA----LHEQFEPQKTLFIQCDVADQQQLRDTFR   78 (267)
T ss_dssp             TCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhhcCCCceEEEecCCCCHHHHHHHHH
Confidence            5789999    9999999999999999999999999986433211000    000 011235566666   566666665


Q ss_pred             CC-----CccEEEeCCCC------------Chh----hHHHHHHHHHhCC---CcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK------------NLD----AVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~------------~~~----~~~~ll~~a~~~g---v~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      ..     ++|+|||+||.            |+.    .++.++..+++.+   ..+||++||...+.....       ..
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~~  151 (267)
T 2gdz_A           79 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------QP  151 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------CH
T ss_pred             HHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC-------Cc
Confidence            42     47999999984            222    4566777776653   579999999876653211       11


Q ss_pred             CCCCChHHHHHHHH---------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCccc---CCCCCcceeeeeHHH
Q 018900          206 KPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI---PGSGMQFTNIAHVRD  273 (349)
Q Consensus       206 ~~~~~k~~~ek~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D  273 (349)
                      .|..+|.+++.+.+         ..++++.+++||.+.++.... ....  ...  +.....   .........+++.+|
T Consensus       152 ~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~d  226 (267)
T 2gdz_A          152 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKE--ENM--GQYIEYKDHIKDMIKYYGILDPPL  226 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCH--HHH--GGGGGGHHHHHHHHHHHCCBCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccc--ccc--chhhhHHHHHHHHhccccCCCHHH
Confidence            22345666555443         248999999999987653111 0000  000  000000   000001234689999


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCHHHH
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  306 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el  306 (349)
                      +|++++.++.++. ..|+++++.+++.+++.|+
T Consensus       227 vA~~v~~l~s~~~-~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          227 IANGLITLIEDDA-LNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHHHHCTT-CSSCEEEEETTTEEEECCC
T ss_pred             HHHHHHHHhcCcC-CCCcEEEecCCCcccccCc
Confidence            9999999998765 4569999999887776553

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.64  E-value=4.4e-16  Score=139.94  Aligned_cols=191  Identities=15%  Similarity=0.151  Sum_probs=124.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..                .++.++.+|   .++++++++
T Consensus         7 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~~~~~v~~~~~   66 (264)
T 2dtx_A            7 RDKVVIVT----GASMGIGRAIAERFVDEGSKVIDLSIHDPGE----------------AKYDHIECDVTNPDQVKASID   66 (264)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESSCCCS----------------CSSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEecCcccC----------------CceEEEEecCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999986431                234555666   566666655


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...+.....    
T Consensus        67 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  142 (264)
T 2dtx_A           67 HIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKN----  142 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCC----
Confidence            32     47999999983                    3445444444    444556789999999876543211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh----hC--CcEEEEecCceeeCCCCCCc------hH----HHHHHHHhCCCcccCCCCCc
Q 018900          201 EGDVVKPDAGHVQVEKYISE----NF--SNWASFRPQYMIGSGNNKDC------EE----WFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~----~~--~~~~ilR~~~v~g~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~  264 (349)
                         ...|..+|.+++.+.+.    .+  +++.+++||.+..+......      ..    .....+....+         
T Consensus       143 ---~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------  210 (264)
T 2dtx_A          143 ---ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHP---------  210 (264)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHST---------
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCC---------
Confidence               11123456665554433    22  88999999998764211000      00    01111111111         


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+++++|+|++++.++.++.. ..|+++++.+|.
T Consensus       211 ~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          211 MQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            12478999999999999986532 456899999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.64  E-value=4.3e-15  Score=133.81  Aligned_cols=194  Identities=14%  Similarity=0.206  Sum_probs=128.1

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+....               .+..+.+|   .+++.++
T Consensus        11 ~~~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A           11 EFTDKVAIVT----GGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN---------------VSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             TTTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCC--CTT---------------SSEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC---------------ceeEEEecCCCHHHHHHH
Confidence            4468899999    999999999999999999999999998754321               23344444   6666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.+++++    +++.+..+||++||...|.....  
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  149 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN--  149 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC--
Confidence            6533     47999999993                    34455555554    45567789999999877654221  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----hh--CCcEEEEecCceeeCCCCC----------CchHHHHHHHHhCCCcccCCCC
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----EN--FSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~~--~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  262 (349)
                           ...|..+|.+++.+.+    |.  ++++..++||.+..+....          .........+....+       
T Consensus       150 -----~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------  217 (269)
T 3vtz_A          150 -----AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP-------  217 (269)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST-------
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC-------
Confidence                 1122345555554443    33  7899999999998753210          001112222222222       


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                        ...+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       218 --~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          218 --MGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --CCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence              13467899999999999987643 457999999985

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.64  E-value=2.2e-15  Score=135.02  Aligned_cols=200  Identities=13%  Similarity=0.156  Sum_probs=127.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++ ..++.++.+|   .++++++++
T Consensus        11 ~~k~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   78 (265)
T 2o23_A           11 KGLVAVIT----GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA-------KKL-GNNCVFAPADVTSEKDVQTALA   78 (265)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHHH
Confidence            46799999    99999999999999999999999999875443211       111 2345666666   566666665


Q ss_pred             CC-----CccEEEeCCCC--------------------------ChhhHHHHHHHHHh----C------CCcEEEEeccc
Q 018900          150 GV-----TFDVVLDNNGK--------------------------NLDAVRPVADWAKS----S------GVKQFLFISSA  188 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------------~~~~~~~ll~~a~~----~------gv~~~i~~Ss~  188 (349)
                      ..     ++|+|||+||.                          |+.++.++++++..    .      +..+||++||.
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           79 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            22     47999999983                          23345556665543    2      66899999998


Q ss_pred             cccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCC
Q 018900          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS  261 (349)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (349)
                      ..+.....       ...|..+|.+++.+.+.       .++++.+++||++.++.... ....+...+....+  ..  
T Consensus       159 ~~~~~~~~-------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~--~~--  226 (265)
T 2o23_A          159 AAFEGQVG-------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVP--FP--  226 (265)
T ss_dssp             HHHHCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCS--SS--
T ss_pred             hhcCCCCC-------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc-cCHHHHHHHHHcCC--Cc--
Confidence            76543211       11122355554444332       38999999999998764321 00111111111111  10  


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCcc
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~  301 (349)
                          ..+++.+|+|++++.+++++. ..|+++++.+|..+
T Consensus       227 ----~~~~~~~dva~~~~~l~~~~~-~~G~~i~vdgG~~~  261 (265)
T 2o23_A          227 ----SRLGDPAEYAHLVQAIIENPF-LNGEVIRLDGAIRM  261 (265)
T ss_dssp             ----CSCBCHHHHHHHHHHHHHCTT-CCSCEEEESTTCCC
T ss_pred             ----CCCCCHHHHHHHHHHHhhcCc-cCceEEEECCCEec
Confidence                236789999999999997643 34589999988543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.64  E-value=9.5e-17  Score=144.81  Aligned_cols=201  Identities=16%  Similarity=0.190  Sum_probs=120.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEE-cCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|+++|++|+++. |+.+...++.       .++.  ...+.++.+|   .+++++
T Consensus        25 ~~k~vlIT----Gas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~v~~   93 (272)
T 4e3z_A           25 DTPVVLVT----GGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVV-------AAITESGGEAVAIPGDVGNAADIAA   93 (272)
T ss_dssp             CSCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            35789999    9999999999999999999998874 4433222110       0111  1245566666   556666


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC-------CCcEEEEeccccccCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS-------GVKQFLFISSAGIYKP  193 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~-------gv~~~i~~Ss~~vy~~  193 (349)
                      +++..     ++|+|||+||.                     |+.++.++++++...       +..+||++||...+..
T Consensus        94 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  173 (272)
T 4e3z_A           94 MFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG  173 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC
Confidence            65533     47999999983                     344555555554322       3568999999765432


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ...      ....|..+|.+++.+.+    +   .|+++..++||.+.++.............+....+         ..
T Consensus       174 ~~~------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~  238 (272)
T 4e3z_A          174 SAT------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVP---------MQ  238 (272)
T ss_dssp             CTT------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCT---------TS
T ss_pred             CCC------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCC---------cC
Confidence            110      01113345666555433    2   28999999999998875433212222222222222         12


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+.+++|+|++++.++.++.. .+|++|++.+|.
T Consensus       239 ~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          239 RAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            356799999999999976543 456999998873

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.64  E-value=1.8e-15  Score=136.95  Aligned_cols=203  Identities=12%  Similarity=0.157  Sum_probs=130.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .+ ....+..+.+|   .+++++++
T Consensus        25 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~-~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           25 LNQRVCIVT----GGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA-------NE-IGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HH-HCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HH-hCCceEEEEecCCCHHHHHHHH
Confidence            356899999    99999999999999999999999999875443211       01 12244556666   56666666


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...+.....   
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  169 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD---  169 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC---
Confidence            533     47999999993                    3445444444    446666779999999776543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCccee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                          ...|..+|.+++.+.+.       .|+++..++||.+..+....     .........+....         ....
T Consensus       170 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r  236 (277)
T 4dqx_A          170 ----RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA---------VMDR  236 (277)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS---------TTCS
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC---------cccC
Confidence                11223455555444332       38999999999987653100     00001111111111         1234


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      +.+.+|+|++++.++.+... ..|+++++.+|..+.
T Consensus       237 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          237 MGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             CcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            67899999999999987643 457999999986543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.64  E-value=9.5e-16  Score=137.54  Aligned_cols=205  Identities=15%  Similarity=0.177  Sum_probs=132.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..++....    +.......+.++.+|   ++++++++
T Consensus         8 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            8 LQGRSVVVT----GGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD----LDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999987543321100    001111245566666   56666655


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEecccccc-CCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIY-KPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy-~~~~~~~  198 (349)
                      +..     ++|++||+||.                    |+.++.++++++    ++.+..++|++||...+ ....   
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---  156 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP---  156 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT---
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC---
Confidence            432     47999999993                    344555555544    44477899999996532 1110   


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....|..+|.+++.+.+.       .|+++..++||.++++.... ....+...+....+.         ..+.+.
T Consensus       157 ----~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p  222 (262)
T 3pk0_A          157 ----GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTP  222 (262)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCH
T ss_pred             ----CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCH
Confidence                011123455555544432       48999999999998864322 112233444433332         235688


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|+|++++.++.++.. ..|+++++.+|..+
T Consensus       223 ~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          223 EDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            9999999999986643 45799999998644

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.64  E-value=6.7e-16  Score=138.22  Aligned_cols=202  Identities=15%  Similarity=0.168  Sum_probs=131.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|+++ .|+.+...+..       .++.  ...+.++.+|   .+++++
T Consensus         3 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   71 (258)
T 3oid_A            3 QNKCALVT----GSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-------EEIEKLGVKVLVVKANVGQPAKIKE   71 (258)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEe----cCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            36789999    999999999999999999999997 67654332211       1111  1245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+..... 
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-  150 (258)
T 3oid_A           72 MFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN-  150 (258)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC-
Confidence            66543     47999999983                    344555555544    6667789999999776543211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ...|..+|.+++.+.+.       .++++..++||.+..+...... ...+...+....++         ..+.
T Consensus       151 ------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~  215 (258)
T 3oid_A          151 ------YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA---------GRMV  215 (258)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT---------SSCB
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC---------CCCc
Confidence                  11123355555544432       3799999999999876432211 12223333333322         2357


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|...
T Consensus       216 ~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          216 EIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             CHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence            899999999999987643 46799999998644

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.64  E-value=6.4e-16  Score=138.54  Aligned_cols=205  Identities=12%  Similarity=0.119  Sum_probs=132.2

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+.+ ..+       ...++..  .++.++.+|   +++++
T Consensus         7 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~-------~~~~l~~~~~~~~~~~~D~~~~~~v~   74 (261)
T 2wyu_A            7 SGKKALVM----GVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRP-------EAEKLAEALGGALLFRADVTQDEELD   74 (261)
T ss_dssp             TTCEEEEE----SCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHH-------HHHHHHHHTTCCEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHH-------HHHHHHHhcCCcEEEECCCCCHHHHH
Confidence            46789999    999  99999999999999999999999763 110       0111111  125566666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~  194 (349)
                      ++++..     ++|+|||+||.                        |+.++.++++++...  +..+||++||...+...
T Consensus        75 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  154 (261)
T 2wyu_A           75 ALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV  154 (261)
T ss_dssp             HHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC
Confidence            665532     48999999984                        234566777777654  12589999997654321


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ...|..+|.+++.+.+.       .|+++.+++||+++++..... ....+...+....++         .
T Consensus       155 ~~-------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~  218 (261)
T 2wyu_A          155 PK-------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------R  218 (261)
T ss_dssp             TT-------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------S
T ss_pred             CC-------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------C
Confidence            11       11123456665554432       389999999999998753221 112233333333322         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHH
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDG  305 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~e  305 (349)
                      .+.+++|+|++++.++.++.. ..|++|++.+|..++..|
T Consensus       219 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            256899999999999976543 356899999986555433

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.64  E-value=1e-15  Score=136.95  Aligned_cols=204  Identities=14%  Similarity=0.191  Sum_probs=132.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.  ...+.++.+|   .+++++
T Consensus         4 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~   72 (257)
T 3imf_A            4 MKEKVVIIT----GGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-------LEIEQFPGQILTVQMDVRNTDDIQK   72 (257)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCSTTCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHH
Confidence            356899999    99999999999999999999999999875443221       1111  1245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH-----HhCCCcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA-----KSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a-----~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|++||+||.                    |+.++.++++++     ++.+..+||++||...+.....
T Consensus        73 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  152 (257)
T 3imf_A           73 MIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG  152 (257)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC
Confidence            66533     47999999993                    345566666655     4445679999999765543211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH--------hhCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCCCcccCCCCCcce
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~--------~~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                             ...|..+|.+++.+.+        ..|+++..++||.+.++......  ...+...+....+         ..
T Consensus       153 -------~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~  216 (257)
T 3imf_A          153 -------VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVP---------LG  216 (257)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTST---------TC
T ss_pred             -------cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCC---------CC
Confidence                   1112235555443322        34899999999999887543210  0001111222211         12


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .+.+.+|+|++++.++.++.. .+|+++++.+|..+.
T Consensus       217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            467899999999999987643 457999999987543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.64  E-value=8.6e-16  Score=136.36  Aligned_cols=201  Identities=14%  Similarity=0.172  Sum_probs=131.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ...+.++.+|   +++++++
T Consensus         4 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (247)
T 3lyl_A            4 NEKVALVT----GASRGIGFEVAHALASKGATVVGTATSQASAEKFE-------NSMKEKGFKARGLVLNISDIESIQNF   72 (247)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEecCCCHHHHHHH
Confidence            46899999    99999999999999999999999999875433211       1111  1245566666   5556655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....  
T Consensus        73 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  150 (247)
T 3lyl_A           73 FAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG--  150 (247)
T ss_dssp             HHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC--
Confidence            5432     48999999993                    344555555543    4456679999999765432211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.+.+.+.+.       .++++..++||.+..+..... .......+....+         ...+.++
T Consensus       151 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~  215 (247)
T 3lyl_A          151 -----QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL-TDEQKSFIATKIP---------SGQIGEP  215 (247)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS-CHHHHHHHHTTST---------TCCCBCH
T ss_pred             -----cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc-cHHHHHHHhhcCC---------CCCCcCH
Confidence                 11122355554444332       389999999999988764432 2222222222221         2356799


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|+|++++.++.++.. .+|+++++.+|..+
T Consensus       216 ~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          216 KDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            9999999999976643 45799999988644

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.64  E-value=9e-16  Score=135.72  Aligned_cols=196  Identities=15%  Similarity=0.190  Sum_probs=124.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh--hhHHhhhc-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVG-  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~--~~l~~~~~-  149 (349)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+...          .++   ++..+.+|.  ++++++++ 
T Consensus         1 ~~k~vlVT----Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~---~~~~~~~D~~~~~~~~~~~~   63 (239)
T 2ekp_A            1 MERKALVT----GGSRGIGRAIAEALVARGYRVAIASRNPEEAA----------QSL---GAVPLPTDLEKDDPKGLVKR   63 (239)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------HHH---TCEEEECCTTTSCHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------Hhh---CcEEEecCCchHHHHHHHHH
Confidence            35789999    99999999999999999999999999874311          111   245556663  33333332 


Q ss_pred             ---CC-CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          150 ---GV-TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       150 ---~~-~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                         .. ++|+|||+||.                    |+.++.++++    .+++.+.++||++||...+......    
T Consensus        64 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----  139 (239)
T 2ekp_A           64 ALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPV----  139 (239)
T ss_dssp             HHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTS----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCC----
Confidence               11 47999999983                    2334444444    4456678899999998776543100    


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                       ....|..+|.+++.+.+.       .|+++.++|||++.++...... ...+...+....+         ...+.+.+|
T Consensus       140 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~d  209 (239)
T 2ekp_A          140 -PIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEE  209 (239)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHH
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHH
Confidence             011123456555544432       3899999999999876421100 0112222222211         123678999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++++.++.++.. ..|+.+++.+|.
T Consensus       210 vA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          210 IARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            99999999976533 456899998874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.63  E-value=1.5e-15  Score=135.72  Aligned_cols=205  Identities=14%  Similarity=0.139  Sum_probs=134.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++ ..++..+.+|   .+++++++
T Consensus         6 l~gk~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   73 (255)
T 4eso_A            6 YQGKKAIVI----GGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR-------EEF-GPRVHALRSDIADLNEIAVLG   73 (255)
T ss_dssp             TTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-GGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCcceEEEccCCCHHHHHHHH
Confidence            346899999    99999999999999999999999999875443211       111 2345666666   55555554


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      +..     ++|++||+||.                    |+.++.++++++...  +..+||++||...+.....     
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  148 (255)
T 4eso_A           74 AAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG-----  148 (255)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT-----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-----
Confidence            432     48999999983                    456677778877653  2358999999776543211     


Q ss_pred             CCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCC-c----hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          202 GDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD-C----EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                        ...|..+|.+++.+.+    |   .|+++..++||.+..+..... .    ...+........++         ..+.
T Consensus       149 --~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~  217 (255)
T 4eso_A          149 --MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNG  217 (255)
T ss_dssp             --BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCB
T ss_pred             --chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCc
Confidence              1112234555444433    2   389999999999998854321 1    11122222222221         2356


Q ss_pred             eHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHH
Q 018900          270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~  304 (349)
                      +.+|+|++++.++.+.....|+++++.+|...++.
T Consensus       218 ~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          218 TADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             CHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             CHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence            89999999999987643456799999998765543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.63  E-value=6.8e-16  Score=138.17  Aligned_cols=206  Identities=17%  Similarity=0.162  Sum_probs=121.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++..       + ....+.++.+|   .++++++++
T Consensus         8 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~-~~~~~~~~~~D~~~~~~~~~~~~   75 (261)
T 3n74_A            8 EGKVALIT----GAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG-------E-IGDAALAVAADISKEADVDAAVE   75 (261)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------H-HCTTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-------H-hCCceEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998754432211       1 12345566666   556666555


Q ss_pred             CC-----CccEEEeCCCC---------------------ChhhHHHHHHH----HHhCC----CcEEEEeccccccCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSG----VKQFLFISSAGIYKPAD  195 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~----a~~~g----v~~~i~~Ss~~vy~~~~  195 (349)
                      ..     ++|+|||+||.                     |+.++.+++++    +++.+    ..+||++||...+....
T Consensus        76 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  155 (261)
T 3n74_A           76 AALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP  155 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC
Confidence            33     47999999983                     23444444443    33332    45799999976543221


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      .       ...|..+|.+++.+.+.       .++++..++||.+..+.....     .... .......+........+
T Consensus       156 ~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~  222 (261)
T 3n74_A          156 N-------LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF-----MGED-SEEIRKKFRDSIPMGRL  222 (261)
T ss_dssp             T-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSC
T ss_pred             C-------ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh-----cccC-cHHHHHHHhhcCCcCCC
Confidence            1       01123355555444332       389999999999987753321     1000 00000111111222357


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                      ++.+|+|++++.++.++.. ..|+++++.+|..++.
T Consensus       223 ~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          223 LKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             CCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             cCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            8999999999999976543 4579999999976653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.63  E-value=3.8e-16  Score=141.33  Aligned_cols=199  Identities=19%  Similarity=0.247  Sum_probs=128.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.  ..++.++.+|   .++++++
T Consensus        21 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~~~~~v~~~   89 (277)
T 2rhc_B           21 DSEVALVT----GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-------KELREAGVEADGRTCDVRSVPEIEAL   89 (277)
T ss_dssp             TSCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEECCCCCHHHHHHH
Confidence            46789999    99999999999999999999999999864332110       1111  1235556666   5566655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC------CCcEEEEeccccccCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS------GVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~------gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++...      +..+||++||...+.....
T Consensus        90 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  169 (277)
T 2rhc_B           90 VAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH  169 (277)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC
Confidence            5432     47999999983                    455666777765443      6689999999765432110


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-----------HHHHHHHHhCCCccc
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRPVPI  258 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~  258 (349)
                             ...|..+|.+++.+.+.       .|+++.++|||.+.++.... ..           ......+....    
T Consensus       170 -------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----  237 (277)
T 2rhc_B          170 -------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITARV----  237 (277)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHHS----
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHhcC----
Confidence                   11123356655554432       37899999999998763211 00           00111111111    


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                           ....+++.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       238 -----p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          238 -----PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence                 113478999999999999976543 456899999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.63  E-value=8.9e-16  Score=135.08  Aligned_cols=174  Identities=18%  Similarity=0.187  Sum_probs=111.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++  .++.++.+|   .++++++++
T Consensus         4 ~~k~vlVt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~--~~~~~~~~D~~~~~~~~~~~~   70 (234)
T 2ehd_A            4 MKGAVLIT----GASRGIGEATARLLHAKGYRVGLMARDEKRLQALA-------AEL--EGALPLPGDVREEGDWARAVA   70 (234)
T ss_dssp             CCCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHS--TTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh--hhceEEEecCCCHHHHHHHHH
Confidence            56789999    99999999999999999999999999764332211       011  145666666   555665554


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+.....    
T Consensus        71 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  146 (234)
T 2ehd_A           71 AMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKG----  146 (234)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCC----
Confidence            32     47999999983                    2233    346667777778899999999876543211    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...+..+|.+.+.+.+       ..|++++++|||.+..+....         . . ..          ..+++.+|
T Consensus       147 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------~-~-~~----------~~~~~~~d  202 (234)
T 2ehd_A          147 ---GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---------T-P-GQ----------AWKLKPED  202 (234)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHH
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---------c-c-cc----------cCCCCHHH
Confidence               1112234555444332       248999999999986653211         0 0 00          11578999


Q ss_pred             HHHHHHHHhcCCCc
Q 018900          274 LSSMLTLAVENPEA  287 (349)
Q Consensus       274 va~~~~~~~~~~~~  287 (349)
                      +|++++.++.++..
T Consensus       203 vA~~~~~l~~~~~~  216 (234)
T 2ehd_A          203 VAQAVLFALEMPGH  216 (234)
T ss_dssp             HHHHHHHHHHSCCS
T ss_pred             HHHHHHHHhCCCcc
Confidence            99999999988754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.63  E-value=1.5e-15  Score=134.47  Aligned_cols=192  Identities=16%  Similarity=0.125  Sum_probs=127.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---  140 (349)
                      ++|+||||    ||+|+||++++++|+++|+       +|++++|+.+...++.       .++.  ...+.++.+|   
T Consensus         1 ~~k~vlIT----GasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~   69 (244)
T 2bd0_A            1 MKHILLIT----GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-------LECRAEGALTDTITADISD   69 (244)
T ss_dssp             -CEEEEEE----TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-------HHHHTTTCEEEEEECCTTS
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHH-------HHHHccCCeeeEEEecCCC
Confidence            35789999    9999999999999999999       9999999764332211       0111  1235566666   


Q ss_pred             hhhHHhhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEecccccc
Q 018900          141 PAEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIY  191 (349)
Q Consensus       141 ~~~l~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy  191 (349)
                      ++++.++++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+
T Consensus        70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  149 (244)
T 2bd0_A           70 MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  149 (244)
T ss_dssp             HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhc
Confidence            55566665421     47999999983                    345566666654    44567899999998776


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .....       ...|..+|.+++.+.+       ..+++++++|||+++++.....           ...      .  
T Consensus       150 ~~~~~-------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------~~~------~--  203 (244)
T 2bd0_A          150 KAFRH-------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-----------DDE------M--  203 (244)
T ss_dssp             SCCTT-------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-----------CST------T--
T ss_pred             CCCCC-------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-----------ccc------c--
Confidence            53211       1112345666555442       2489999999999998864321           000      0  


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      ...+++.+|+|++++.++.++.. ..++++...+++.+
T Consensus       204 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          204 QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence            13578999999999999987654 23456666666554

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.63  E-value=2.8e-15  Score=135.36  Aligned_cols=198  Identities=14%  Similarity=0.125  Sum_probs=128.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee---cCCCeEEEcC---h----
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---P----  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~----  141 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.+..+++.       .++.   ...+.++.+|   .    
T Consensus        10 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~~~   78 (276)
T 1mxh_A           10 ECPAAVIT----GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV-------AELNAARAGSAVLCKGDLSLSSSLL   78 (276)
T ss_dssp             -CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHSTTCEEEEECCCSSSTTHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHHhcCCceEEEeccCCCccccH
Confidence            45789999    99999999999999999999999999 653332110       1111   1235556666   5    


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC-------------------------------ChhhHHHHHHHHHh---CCC---
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK-------------------------------NLDAVRPVADWAKS---SGV---  179 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~-------------------------------~~~~~~~ll~~a~~---~gv---  179 (349)
                      ++++++++..     ++|+|||+||.                               |+.++.++++++..   .+.   
T Consensus        79 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~  158 (276)
T 1mxh_A           79 DCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWR  158 (276)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCC
Confidence            6666666532     47999999983                               22345566666655   344   


Q ss_pred             ---cEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHH
Q 018900          180 ---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDR  249 (349)
Q Consensus       180 ---~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~  249 (349)
                         .+||++||...+.....       ...|..+|.+++.+.+.       .|+++.+++||.++++ .  .....+...
T Consensus       159 ~~~g~iv~isS~~~~~~~~~-------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~~~~~  228 (276)
T 1mxh_A          159 SRNLSVVNLCDAMTDLPLPG-------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQETQEE  228 (276)
T ss_dssp             CCCEEEEEECCGGGGSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHHHHHH
T ss_pred             CCCcEEEEECchhhcCCCCC-------CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHHHHHH
Confidence               79999999876643211       11223456655544432       3899999999999998 2  222233333


Q ss_pred             HHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +....++        .+.+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       229 ~~~~~p~--------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          229 YRRKVPL--------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HHTTCTT--------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhcCCC--------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            3332221        12267899999999999976543 356899999885

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.63  E-value=2.7e-15  Score=135.58  Aligned_cols=220  Identities=14%  Similarity=0.117  Sum_probs=134.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCC-CCCccc----ce--ecCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNRFN----EI--VSAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~-~~~~~~----~l--~~~~~~~~~~D---~  141 (349)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+........ ......    ++  ....+.++.+|   +
T Consensus        11 l~gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   86 (278)
T 3sx2_A           11 LTGKVAFIT----GAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR   86 (278)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            357899999    9999999999999999999999999974211100000 000000    11  12345666776   5


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC----------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCC
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK----------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPAD  195 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~----------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~  195 (349)
                      ++++++++..     ++|+|||+||.                |+.++.++++++    ++.+ ..+||++||...+....
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG  166 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc
Confidence            6666666532     47999999994                455566666654    3333 56999999976543221


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHH-HhCCCcccCCCCCccee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRI-VRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  267 (349)
                      ...   .....|..+|.+++.+.+.       .|+++..++||.+..+.........++... .........+.... ..
T Consensus       167 ~~~---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~  242 (278)
T 3sx2_A          167 SAD---PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VE  242 (278)
T ss_dssp             CSS---HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CS
T ss_pred             cCC---CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cC
Confidence            100   0001122345554444332       379999999999998876543222223222 22222222333333 56


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       243 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          243 VLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            88999999999999987543 456999999885

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.63  E-value=8.8e-16  Score=137.50  Aligned_cols=208  Identities=15%  Similarity=0.143  Sum_probs=124.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCccccee---cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV---SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+. ..++.       .++.   ..++.++.+|   .++++
T Consensus         3 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~v~   71 (260)
T 1x1t_A            3 KGKVAVVT----GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR-------AGLAAQHGVKVLYDGADLSKGEAVR   71 (260)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH-------HHHHHHHTSCEEEECCCTTSHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH-------HHHHhccCCcEEEEECCCCCHHHHH
Confidence            46789999    999999999999999999999999998654 32110       1111   1234555566   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...+.....
T Consensus        72 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  151 (260)
T 1x1t_A           72 GLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN  151 (260)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC
Confidence            666532     47999999983                    2334444444    445556789999999876543211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHH--HhCCCcccC-CCCCcce
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRPVPIP-GSGMQFT  266 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~  266 (349)
                             ...|..+|.+++.+.+.       .|+++..++||++.++..... ........  ........+ .......
T Consensus       152 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~  223 (260)
T 1x1t_A          152 -------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSL  223 (260)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCCCC
Confidence                   11223456665554432       379999999999988753321 00000000  000000000 0000113


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       224 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          224 QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            478999999999999976532 456899998874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.63  E-value=1.9e-15  Score=134.71  Aligned_cols=188  Identities=12%  Similarity=0.137  Sum_probs=126.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ..|+|+||||    ||+|+||++++++|+++|++|++++|+.+....              ..+.++..|.++++++++.
T Consensus        19 ~~m~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~d~~d~~~v~~~~~~   80 (251)
T 3orf_A           19 SHMSKNILVL----GGSGALGAEVVKFFKSKSWNTISIDFRENPNAD--------------HSFTIKDSGEEEIKSVIEK   80 (251)
T ss_dssp             ---CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS--------------EEEECSCSSHHHHHHHHHH
T ss_pred             cccCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------cceEEEeCCHHHHHHHHHH
Confidence            3467899999    999999999999999999999999998754421              1122334577776666543


Q ss_pred             C-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      .     ++|+|||+||.                     |+.++.++++++...-  ..+||++||...+.....      
T Consensus        81 ~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------  154 (251)
T 3orf_A           81 INSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG------  154 (251)
T ss_dssp             HHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------
T ss_pred             HHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC------
Confidence            3     48999999983                     3556677777765532  248999999776532211      


Q ss_pred             CCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          203 DVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                       ...+..+|.+.+.+.+    +     .++++.+++||.+..+         +........         ....+++.+|
T Consensus       155 -~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~~~d  215 (251)
T 3orf_A          155 -MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP---------TNRKYMSDA---------NFDDWTPLSE  215 (251)
T ss_dssp             -BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH---------HHHHHCTTS---------CGGGSBCHHH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc---------chhhhcccc---------cccccCCHHH
Confidence             1112335555555443    2     4788999999988664         222322222         2235688999


Q ss_pred             HHHHHHHHhcC-CCc-cCCCEEEeeCCCcc
Q 018900          274 LSSMLTLAVEN-PEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       274 va~~~~~~~~~-~~~-~~~~~~~i~~~~~~  301 (349)
                      +|++++.++.+ ... .+|+++++.+++..
T Consensus       216 va~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          216 VAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence            99999999998 322 45689999887644

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.63  E-value=1.3e-15  Score=135.24  Aligned_cols=199  Identities=16%  Similarity=0.227  Sum_probs=127.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.+..+++.       .++.  ..++.++.+|   ++++++
T Consensus         3 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   71 (246)
T 2uvd_A            3 KGKVALVT----GASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVV-------DEIKKLGSDAIAVRADVANAEDVTN   71 (246)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            46789999    99999999999999999999999999 443222110       1111  1234556666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.+    ++.++..+++.+.++||++||...+..... 
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  150 (246)
T 2uvd_A           72 MVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG-  150 (246)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC-
Confidence            66532     47999999993                    2334    445555666667789999999764332110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+.+.+.+       ..|+++.+++||.+..+..... ...+...+....+.         ..+++
T Consensus       151 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~---------~~~~~  214 (246)
T 2uvd_A          151 ------QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DENIKAEMLKLIPA---------AQFGE  214 (246)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CTTHHHHHHHTCTT---------CSCBC
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CHHHHHHHHhcCCC---------CCCcC
Confidence                  1112235555444432       2489999999999987753321 11122222222221         23689


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.++.. ..|+++++.+|.
T Consensus       215 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          215 AQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            99999999999976533 456899998875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.63  E-value=3.2e-15  Score=133.01  Aligned_cols=200  Identities=13%  Similarity=0.152  Sum_probs=123.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+. +...+       ...+. ..++.++.+|   ++++++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~-~~~~~~~~~Dv~~~~~v~~~~   73 (249)
T 2ew8_A            6 KDKLAVIT----GGANGIGRAIAERFAVEGADIAIADLVPAPEAEA-------AIRNL-GRRVLTVKCDVSQPGDVEAFG   73 (249)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH-------HHHHT-TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH-------HHHhc-CCcEEEEEeecCCHHHHHHHH
Confidence            46789999    9999999999999999999999999987 43321       00000 1235556666   55666655


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.++.+    ++..+++.+..+||++||...+.....   
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  150 (249)
T 2ew8_A           74 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---  150 (249)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC---
Confidence            321     47999999983                    2344434    444466667789999999877653211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+.       .|+++.+++||.+..+......... ......  .+..     ....+.+.+
T Consensus       151 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~--~~~~-----~~~~~~~p~  218 (249)
T 2ew8_A          151 ----YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-MFDVLP--NMLQ-----AIPRLQVPL  218 (249)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTS-----SSCSCCCTH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-hhhHHH--HhhC-----ccCCCCCHH
Confidence                11223456665554432       3899999999999887532110000 000101  0101     112468999


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.++.. ..|+++++.+|.
T Consensus       219 dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          219 DLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            999999999976532 456899998874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.63  E-value=8.9e-16  Score=137.07  Aligned_cols=192  Identities=16%  Similarity=0.204  Sum_probs=123.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+                .+.++.+|   +++++++++
T Consensus        20 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           20 MSRSVLVT----GGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------------GFLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------------cceEEEecCCCHHHHHHHHH
Confidence            56889999    99999999999999999999999999765432                14455555   566665554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...+....     
T Consensus        80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  154 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA-----  154 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-----
Confidence            32     37999999983                    2344445555    44445678999999976432210     


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                        ....|..+|.+++.+.+.       .++++.+++||.+..+.... ........+....+         ...+++.+|
T Consensus       155 --~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~~~~~p~d  222 (253)
T 2nm0_A          155 --GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQVP---------LGRYARPEE  222 (253)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTCT---------TCSCBCHHH
T ss_pred             --CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHH
Confidence              001122356655554432       37899999999987654221 00011111211111         123689999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|++++.++.++.. ..|+++.+.+|..+
T Consensus       223 vA~~i~~l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          223 IAATVRFLASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHhCccccCCcCcEEEECCcccc
Confidence            99999999987543 45689999988643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.63  E-value=1.7e-15  Score=137.94  Aligned_cols=206  Identities=15%  Similarity=0.169  Sum_probs=132.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+...    ...+-....+.++.+|   ++++++++
T Consensus        45 l~gk~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~d~~~v~~~~  116 (291)
T 3ijr_A           45 LKGKNVLIT----GGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETK----QYVEKEGVKCVLLPGDLSDEQHCKDIV  116 (291)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH----HHHHTTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998642211000    0000011245566666   55566655


Q ss_pred             cCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +..     ++|++||+||.                     |+.++.++++++...  +..+||++||...+.....    
T Consensus       117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----  192 (291)
T 3ijr_A          117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET----  192 (291)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT----
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC----
Confidence            432     47999999983                     456677888887654  2358999999876643221    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+.       .|+++..++||.++++.............         +........+.+.+|
T Consensus       193 ---~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r~~~p~d  260 (291)
T 3ijr_A          193 ---LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---------FGSNVPMQRPGQPYE  260 (291)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---------TTTTSTTSSCBCGGG
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH---------HHccCCCCCCcCHHH
Confidence               11123456655544432       38999999999998764211000111111         111222344678999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|++++.++.++.. ..|+++++.+|..+
T Consensus       261 vA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          261 LAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             THHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            99999999987643 45799999988543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.62  E-value=9e-16  Score=138.05  Aligned_cols=199  Identities=12%  Similarity=0.131  Sum_probs=128.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .+ ....+.++.+|   .+++++++
T Consensus        25 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~-~~~~~~~~~~Dv~d~~~v~~~~   92 (266)
T 3grp_A           25 LTGRKALVT----GATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA-------AD-LGKDVFVFSANLSDRKSIKQLA   92 (266)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HH-HCSSEEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HH-hCCceEEEEeecCCHHHHHHHH
Confidence            356899999    99999999999999999999999999865443211       11 12345666666   56666665


Q ss_pred             cCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.+    ++.++..+++.+..+||++||...+.....   
T Consensus        93 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---  169 (266)
T 3grp_A           93 EVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPG---  169 (266)
T ss_dssp             HHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------C---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCC---
Confidence            432     47999999993                    3444    455556666667789999999654332110   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+       ..|+++..++||.+..+.... ........+....++         ..+.+.+
T Consensus       170 ----~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~e  235 (266)
T 3grp_A          170 ----QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIPM---------KRMGIGE  235 (266)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCTT---------CSCBCHH
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCCC---------CCCcCHH
Confidence                1112234555444332       238999999999998753221 112223333333332         2356789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.++.. ..|+++++.+|.
T Consensus       236 dvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          236 EIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCccccCccCCEEEECCCe
Confidence            999999999987643 457999999885

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.62  E-value=7.8e-15  Score=132.79  Aligned_cols=215  Identities=14%  Similarity=0.101  Sum_probs=130.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC--CCccc----cee--cCCCeEEEcC---
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FNRFN----EIV--SAGGKTVWGD---  140 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~--~~~~~----~l~--~~~~~~~~~D---  140 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|..+.........  .....    ++.  ...+..+.+|   
T Consensus        13 l~gk~~lVT----Gas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           13 LQGRVAFIT----GAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            357899999    99999999999999999999999998542211110000  00000    111  1234555666   


Q ss_pred             hhhHHhhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccc
Q 018900          141 PAEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGI  190 (349)
Q Consensus       141 ~~~l~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~v  190 (349)
                      .++++++++..     ++|++||+||.                    |+.++.++++++    ++.+ ..+||++||...
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            56666665532     48999999993                    445555555554    4444 578999999776


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHh-CCCcccCCCC
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSG  262 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~  262 (349)
                      +.....       ...|..+|.+++.+.+    |   .|+++..++||.+.++..........+..... .......  .
T Consensus       169 ~~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~  239 (280)
T 3pgx_A          169 LKATPG-------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM--P  239 (280)
T ss_dssp             TSCCTT-------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCB--T
T ss_pred             ccCCCC-------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhc--c
Confidence            543211       1122335555444333    2   48999999999999886543211111111100 0000111  1


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .....+++++|+|++++.++.++.. ..|+++++.+|.
T Consensus       240 ~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          240 VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1112488999999999999987643 456999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.62  E-value=1.4e-15  Score=136.66  Aligned_cols=203  Identities=15%  Similarity=0.193  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee----cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.    ..++.++.+|   .++++
T Consensus        12 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~~~~~~v~   80 (267)
T 1iy8_A           12 TDRVVLIT----GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK-------AAVLETAPDAEVLTTVADVSDEAQVE   80 (267)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHCTTCCEEEEECCTTSHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhhcCCceEEEEEccCCCHHHHH
Confidence            46899999    99999999999999999999999999864432211       1111    2245566666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCCC---------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGKN---------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~~---------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|+|||+||..                     +.+    ++.++..+++.+..+||++||...+....
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (267)
T 1iy8_A           81 AYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG  160 (267)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCC
Confidence            666532     479999999831                     122    34566667777778999999976543211


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCC-------CchHHHHHHHHhCCCcccCCC
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGS  261 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~  261 (349)
                      .       ...|..+|.+++.+.+       ..|+++.+++||.++++....       .......+.+....+      
T Consensus       161 ~-------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------  227 (267)
T 1iy8_A          161 N-------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP------  227 (267)
T ss_dssp             S-------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT------
T ss_pred             C-------CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC------
Confidence            0       1122345665554443       248999999999998753110       000101111211111      


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                         ...+.+.+|+|++++.++.++.. ..|+++++.+|..++
T Consensus       228 ---~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          228 ---SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             ---TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             ---CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence               12367899999999999976533 456899999886443

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.62  E-value=1.2e-15  Score=137.34  Aligned_cols=200  Identities=16%  Similarity=0.191  Sum_probs=127.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce---ecCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++   ....+.++.+|   .+++++
T Consensus        20 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dl~~~~~v~~   88 (267)
T 1vl8_A           20 RGRVALVT----GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA-------QKLTEKYGVETMAFRCDVSNYEEVKK   88 (267)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            56899999    99999999999999999999999999864332110       111   01234556666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccc-cCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGI-YKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~v-y~~~~~  196 (349)
                      +++..     ++|+|||+||.                    |+.++.++++    .+++.+.++||++||..+ +...  
T Consensus        89 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--  166 (267)
T 1vl8_A           89 LLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM--  166 (267)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS--
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC--
Confidence            65532     47999999983                    3344545544    445667789999999763 2110  


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                       +    ....|..+|.+++.+.+.       .|+++.+++||++..+...... .......+....+.         ..+
T Consensus       167 -~----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~  232 (267)
T 1vl8_A          167 -P----NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL---------GRT  232 (267)
T ss_dssp             -S----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT---------SSC
T ss_pred             -C----CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC---------CCC
Confidence             0    011223456665554432       3899999999999776432100 01122222222221         236


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++.+|+|++++.++.++.. ..|+++.+.+|.
T Consensus       233 ~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          233 GVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            7899999999999987533 456899998874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.62  E-value=1.1e-15  Score=138.24  Aligned_cols=200  Identities=14%  Similarity=0.166  Sum_probs=127.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.. .++.++.+|   .+++++++
T Consensus        28 ~~k~vlVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~Dv~d~~~v~~~~   96 (276)
T 2b4q_A           28 AGRIALVT----GGSRGIGQMIAQGLLEAGARVFICARDAEACADTA-------TRLSAYGDCQAIPADLSSEAGARRLA   96 (276)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHHTTSSCEEECCCCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCceEEEEeeCCCHHHHHHHH
Confidence            46889999    99999999999999999999999999864432211       01110 033444455   56666665


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHH----HHHHHhCCC----cEEEEeccccccCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSGV----KQFLFISSAGIYKPAD  195 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~l----l~~a~~~gv----~~~i~~Ss~~vy~~~~  195 (349)
                      +..     ++|+|||+||.                    |+.++.++    +..+++.+.    ++||++||...+....
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~  176 (276)
T 2b4q_A           97 QALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG  176 (276)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC
Confidence            532     47999999983                    33444444    444444454    7999999987654321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHh--CCCcccCCCCCcce
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIPGSGMQFT  266 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  266 (349)
                      .      ....|..+|.+++.+.+.       .++++.+++||.+..+.... ........+..  ..++         .
T Consensus       177 ~------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p~---------~  240 (276)
T 2b4q_A          177 E------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIPM---------G  240 (276)
T ss_dssp             C------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTSTT---------S
T ss_pred             C------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCCC---------C
Confidence            1      111344567776655432       38999999999998764321 00001112211  1111         2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       241 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          241 RWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            367899999999999987533 456899998875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.62  E-value=5.5e-16  Score=139.23  Aligned_cols=199  Identities=15%  Similarity=0.142  Sum_probs=131.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++...       ++. .++.++.+|   .++++++++
T Consensus         5 ~~k~vlIT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~-~~~~~~~~D~~~~~~v~~~~~   72 (263)
T 2a4k_A            5 SGKTILVT----GAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-------ALE-AEAIAVVADVSDPKAVEAVFA   72 (263)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------TCC-SSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hhc-CceEEEEcCCCCHHHHHHHHH
Confidence            46889999    999999999999999999999999998654332111       111 245566666   566666655


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      ..     ++|+|||+||.                    |+.++.++++++...-  ..+||++||...++...       
T Consensus        73 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------  145 (263)
T 2a4k_A           73 EALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG-------  145 (263)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHH-------
T ss_pred             HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCC-------
Confidence            43     47999999983                    3456667777665431  45999999987662110       


Q ss_pred             CCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          203 DVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                       ...|..+|.+++.+.+       ..|+++.++|||.+.++.... ....+...+....++         ..+.+.+|+|
T Consensus       146 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~~~~~p~dvA  214 (263)
T 2a4k_A          146 -LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVA  214 (263)
T ss_dssp             -HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHH
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence             0112235555444433       238999999999998875432 112223333333221         2357899999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      ++++.++.++.. ..|+++++.+|..+
T Consensus       215 ~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          215 QAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHhCccccCCcCCEEEECCCccc
Confidence            999999986543 45689999988644

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.62  E-value=5.9e-16  Score=138.32  Aligned_cols=200  Identities=16%  Similarity=0.158  Sum_probs=124.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ...+.++.+|   .+++.++
T Consensus         1 m~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~~   69 (256)
T 1geg_A            1 MKKVALVT----GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-------SEINQAGGHAVAVKVDVSDRDQVFAA   69 (256)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            45789999    99999999999999999999999999864332211       1111  1234556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCC-CcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSG-VKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||+||.                    |+.++.    .++..+++.+ ..+||++||...+..... 
T Consensus        70 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  148 (256)
T 1geg_A           70 VEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE-  148 (256)
T ss_dssp             HHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC-
Confidence            6522     47999999983                    233333    4444555555 679999999764332110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-----------HHHHHHHHhCCCcccC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRPVPIP  259 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~~~  259 (349)
                            ...|..+|.+++.+.+.       .++++.++|||.+.++.... ..           ......+....     
T Consensus       149 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----  216 (256)
T 1geg_A          149 ------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE-IDRQVSEAAGKPLGYGTAEFAKRI-----  216 (256)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH-HHHHHHHHHTCCTTHHHHHHHTTC-----
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh-hhhhccccccCChHHHHHHHHhcC-----
Confidence                  11223456655544432       38999999999998753110 00           00001111111     


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                          ....+.+.+|+|++++.++.++.. ..|+++++.+|..
T Consensus       217 ----p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          217 ----TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             ----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             ----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence                112368999999999999976533 4568999988753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.62  E-value=2.7e-15  Score=133.88  Aligned_cols=198  Identities=13%  Similarity=0.119  Sum_probs=124.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC--
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~--  151 (349)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.        ++...+.++...|.++++++++..  
T Consensus         1 Mk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~l~~~~~~~~~~d~~~v~~~~~~~~~   68 (254)
T 1zmt_A            1 MSTAIVT----NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE--------AFAETYPQLKPMSEQEPAELIEAVTS   68 (254)
T ss_dssp             -CEEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH--------HHHHHCTTSEECCCCSHHHHHHHHHH
T ss_pred             CeEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHHhcCCcEEEECHHHHHHHHHHHHH
Confidence            5789999    99999999999999999999999999875443211        111112222222655555554422  


Q ss_pred             ---CccEEEeCCCCC---------------------hhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCCCCCC
Q 018900          152 ---TFDVVLDNNGKN---------------------LDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       152 ---~~d~Vi~~a~~~---------------------~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                         ++|+|||+||..                     +.++.+++++    +++.+..+||++||...+.....       
T Consensus        69 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  141 (254)
T 1zmt_A           69 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE-------  141 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT-------
T ss_pred             HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC-------
Confidence               479999999842                     2344444444    44556679999999765532111       


Q ss_pred             CCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHH-------HHHHHhCCCcccCCCCCcceeee
Q 018900          204 VVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWF-------FDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      ...|..+|.+++.+.+       ..++++.+++||.++|+.........+       ...+....++         ..+.
T Consensus       142 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~---------~~~~  212 (254)
T 1zmt_A          142 LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRLG  212 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC---------CCCc
Confidence            1112335555544433       238999999999998876543211111       1111111111         1257


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       213 ~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          213 TQKELGELVAFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             CHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            899999999999987643 456899998875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.61  E-value=5.4e-16  Score=143.44  Aligned_cols=229  Identities=16%  Similarity=0.107  Sum_probs=130.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-e--ecCCCeEEEcC---hhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-I--VSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l--~~~~~~~~~~D---~~~l~~~  147 (349)
                      +|+||||    ||+|+||++++++|+++|++|++++|+........   .....+ +  ...++.++.+|   .+++.++
T Consensus         5 ~k~vlVT----Gas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~---~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            5 KKIILIT----GASSGFGRLTAEALAGAGHRVYASMRDIVGRNASN---VEAIAGFARDNDVDLRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             CCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHH---HHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHH---HHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            5789999    99999999999999999999999999742211000   000000 0  12345666666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..++|++||...+....+  
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~--  155 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP--  155 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS--
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC--
Confidence            6533     47999999993                    456677777766    6677889999999876532211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC------CchHHHHHHHHhCCCcccCCCCCc-
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVPIPGSGMQ-  264 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-  264 (349)
                          ....|..+|.+++.+.+.       .|+++++++||.+.++....      .... .............+.+-.. 
T Consensus       156 ----~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  230 (324)
T 3u9l_A          156 ----YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHA-RQAEYEAGPNAGLGEEIKKA  230 (324)
T ss_dssp             ----SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHH-HHHHHHHTTTTTHHHHHHHH
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHH-HHHhhccccccCCHHHHHHH
Confidence                011233456665554433       38999999999997653211      0011 1111111110000000000 


Q ss_pred             ----ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccC-------HHHHHHHHHHHhCCC
Q 018900          265 ----FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT-------LDGMAKLCAQAAGLP  317 (349)
Q Consensus       265 ----~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t-------~~el~~~~~~~~g~~  317 (349)
                          ..+..+.+|+|++++.+++.+....+..+.++. ....       ..++.+.+.+.+|.+
T Consensus       231 ~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp-~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          231 FAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDP-AEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             HHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECT-TCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             HHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCC-cchHHHHHHHHHHHHHHHHHHHcChH
Confidence                001257899999999999987543334555553 2344       334444445555654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.61  E-value=3.3e-15  Score=134.32  Aligned_cols=186  Identities=16%  Similarity=0.125  Sum_probs=121.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.           ..++.++.+|   .+++++++
T Consensus        14 ~~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~   78 (266)
T 3p19_A           14 SMKKLVVIT----GASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----------LPNTLCAQVDVTDKYTFDTAI   78 (266)
T ss_dssp             -CCCEEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----------CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----------cCCceEEEecCCCHHHHHHHH
Confidence            356889999    99999999999999999999999999875544322           1244555555   56666665


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.++.+    ++..+++.+..+||++||...+.....   
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---  155 (266)
T 3p19_A           79 TRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD---  155 (266)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC---
Confidence            532     48999999993                    3445555    455556667789999999776543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+       ..|+++..++||.+..+................. ..+       ...+++.+
T Consensus       156 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pe  223 (266)
T 3p19_A          156 ----HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAAD  223 (266)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHH
Confidence                1112335555544332       2489999999999988753321111111111110 001       12367899


Q ss_pred             HHHHHHHHHhcCCCc
Q 018900          273 DLSSMLTLAVENPEA  287 (349)
Q Consensus       273 Dva~~~~~~~~~~~~  287 (349)
                      |+|++++.++.++..
T Consensus       224 dvA~av~~l~~~~~~  238 (266)
T 3p19_A          224 DVARAVLFAYQQPQN  238 (266)
T ss_dssp             HHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHcCCCC
Confidence            999999999998765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.61  E-value=3.7e-15  Score=132.55  Aligned_cols=198  Identities=14%  Similarity=0.177  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.        +........+.+|   +++++++++
T Consensus         8 ~gk~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~   75 (248)
T 3op4_A            8 EGKVALVT----GASRGIGKAIAELLAERGAKVIGTATSESGAQAIS--------DYLGDNGKGMALNVTNPESIEAVLK   75 (248)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------HHHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HHhcccceEEEEeCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875443211        1111233455555   666666665


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+....+    
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  151 (248)
T 3op4_A           76 AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG----  151 (248)
T ss_dssp             HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC----
Confidence            32     47999999993                    345555555544    4456789999999664432111    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+       ..|+++..++||.+..+..... ............+.         ..+.+.+|
T Consensus       152 ---~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p~---------~r~~~p~d  218 (248)
T 3op4_A          152 ---QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATLAQVPA---------GRLGDPRE  218 (248)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHHHTCTT---------CSCBCHHH
T ss_pred             ---ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHHhcCCC---------CCCcCHHH
Confidence               1112234555444333       2389999999999987754321 22223333333221         24678999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++++.++.++.. ..|+++++.+|.
T Consensus       219 va~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          219 IASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHcCCccCCccCcEEEECCCe
Confidence            99999999876543 457999999885

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.61  E-value=5.6e-16  Score=141.64  Aligned_cols=214  Identities=13%  Similarity=0.140  Sum_probs=133.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--C---CCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--A---GGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~---~~~~~~~D---~~~l  144 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++..  .   ++.++.+|   .+++
T Consensus        25 ~~k~vlVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           25 SGKSVIIT----GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-------QQILKAGVPAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCCCceEEEEecCCCCHHHH
Confidence            45789999    99999999999999999999999999865432211       11111  1   35566666   5566


Q ss_pred             HhhhcCC-----CccEEEeCCCCC----------------------hhhHHHHH----HHHHhCCCcEEEEeccccccCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGKN----------------------LDAVRPVA----DWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~~----------------------~~~~~~ll----~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +++++..     ++|+|||+||..                      +.++.+++    ..+++.+ .+||++||...+..
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~  172 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC
Confidence            6665432     479999999832                      22333444    4444556 79999999876543


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCc-h-------HHHHHHHHhCCCccc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDC-E-------EWFFDRIVRKRPVPI  258 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~-~-------~~~~~~~~~~~~~~~  258 (349)
                      ..  +    ....|..+|.+++.+.+       ..|+++.++|||++.++...... .       ..+...+...  .  
T Consensus       173 ~~--~----~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~--  242 (297)
T 1xhl_A          173 AH--S----GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC--I--  242 (297)
T ss_dssp             CC--T----TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C--
T ss_pred             CC--C----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc--C--
Confidence            20  0    01122345655544433       24899999999999876421100 0       0011111111  1  


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCC-C-ccCCCEEEeeCCCccCHHHHHHHHHHH
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLVSDRAVTLDGMAKLCAQA  313 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~-~-~~~~~~~~i~~~~~~t~~el~~~~~~~  313 (349)
                           ....+.+.+|+|++++.++.++ . ...|+++++.+|..+...+.+..+.++
T Consensus       243 -----p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          243 -----PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             -----CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence                 1124689999999999999764 2 245689999999777666655555443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.61  E-value=1.3e-15  Score=137.89  Aligned_cols=200  Identities=17%  Similarity=0.186  Sum_probs=128.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.  ...+.++.+|   .+++.++
T Consensus        23 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           23 RPQTAFVT----GVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-------DGLRAAGHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             --CEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46789999    99999999999999999999999999865433211       1111  1245566666   5556555


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH------hCCCcEEEEeccccccCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK------SSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~------~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++.      +.+..+||++||...+.....
T Consensus        92 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~  171 (279)
T 3sju_A           92 VAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY  171 (279)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC
Confidence            5432     48999999993                    4566667777553      356679999999775533211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCC----------chHHHHHHHHhCCCcccC
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIP  259 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~  259 (349)
                             ...|..+|.+++.+.+    |   .|+++..++||.+..+.....          ........+....+    
T Consensus       172 -------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  240 (279)
T 3sju_A          172 -------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP----  240 (279)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT----
T ss_pred             -------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC----
Confidence                   1112334555444433    2   489999999999976521100          01112222222221    


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                           ...+.+++|+|++++.++.++.. ..|+++++.+|.
T Consensus       241 -----~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          241 -----LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             -----TSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             -----CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence                 23467899999999999987643 467999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.61  E-value=5.7e-15  Score=133.57  Aligned_cols=203  Identities=12%  Similarity=0.115  Sum_probs=129.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++ ...+..+.+|   ++++++++
T Consensus        27 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~d~~~v~~~~   94 (277)
T 3gvc_A           27 LAGKVAIVT----GAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA-------TKI-GCGAAACRVDVSDEQQIIAMV   94 (277)
T ss_dssp             CTTCEEEET----TTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHH-CSSCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHc-CCcceEEEecCCCHHHHHHHH
Confidence            357899999    99999999999999999999999999865443211       111 2345666666   55666555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.++.+++++    +++.+..+||++||...+....+   
T Consensus        95 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~---  171 (277)
T 3gvc_A           95 DACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG---  171 (277)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---
Confidence            433     48999999993                    34454444444    45566789999999765432111   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCC------CCcce
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS------GMQFT  266 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  266 (349)
                          ...|..+|.+++.+.+       ..|+++.+++||.++++.         ........+-.....      .....
T Consensus       172 ----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          172 ----TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM---------QQTAMAMFDGALGAGGARSMIARLQG  238 (277)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---------HHHHHTCC------CCHHHHHHHHHS
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch---------HHHhhhcchhhHHHHhhhhhhhcccc
Confidence                1122345655554443       248999999999998753         111111000000000      00112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .+.+.+|+|++++.++.++.. ..|+++++.+|...+
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            467899999999999987643 457999999986443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.60  E-value=1.7e-15  Score=135.10  Aligned_cols=203  Identities=16%  Similarity=0.171  Sum_probs=128.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc-CCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhH
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEV  144 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l  144 (349)
                      ...+++||||    ||+|+||++++++|+++|++|++++| +.+...+.       ..++.  ...+.++.+|   .+++
T Consensus        10 ~~~~k~vlIT----Gas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~~v   78 (256)
T 3ezl_A           10 VMSQRIAYVT----GGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW-------LEDQKALGFDFYASEGNVGDWDST   78 (256)
T ss_dssp             ---CEEEEET----TTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH-------HHHHHHTTCCCEEEECCTTCHHHH
T ss_pred             CCCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-------HHHHHhcCCeeEEEecCCCCHHHH
Confidence            3467899999    99999999999999999999999884 43322211       01111  1245566666   5556


Q ss_pred             HhhhcCC-----CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCcEEEEeccccccCCCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      +++++..     ++|+|||+||.                    |+.++.    .++..+++.+..+||++||...+....
T Consensus        79 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (256)
T 3ezl_A           79 KQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF  158 (256)
T ss_dssp             HHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC
Confidence            6655433     48999999993                    344544    445555666778999999976543321


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      +       ...|..+|.+.+.+.+    +   .++++..++||.+..+.... ....+...+....++         ..+
T Consensus       159 ~-------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~---------~~~  221 (256)
T 3ezl_A          159 G-------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIPV---------RRL  221 (256)
T ss_dssp             C-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHSTT---------SSC
T ss_pred             C-------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCCC---------CCC
Confidence            1       1112234555444333    2   37999999999997753221 122333444333332         235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+.+|+|++++.++..+.. .+|+++++.+|..+
T Consensus       222 ~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          222 GSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             cCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            6899999999999876533 45799999988643

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.60  E-value=4.4e-15  Score=132.80  Aligned_cols=201  Identities=13%  Similarity=0.134  Sum_probs=125.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC--cccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.  ..+..       .++.  ..++.++.+|   +++++
T Consensus         1 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~   69 (258)
T 3a28_C            1 MSKVAMVT----GGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-------KLIEAADQKAVFVGLDVTDKANFD   69 (258)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHH
Confidence            35789999    999999999999999999999999998654  22110       1111  1235556666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCC-cEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGV-KQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv-~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++++    ++.+. .+||++||...+....
T Consensus        70 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  149 (258)
T 3a28_C           70 SAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP  149 (258)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC
Confidence            665422     47999999983                    233444454444    44466 7999999976554211


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCch-----------HHHHHHHHhCCCcc
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRPVP  257 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~-----------~~~~~~~~~~~~~~  257 (349)
                      .       ...|..+|.+++.+.+.       .++++.+++||.+..+.... ..           ..+...+....+  
T Consensus       150 ~-------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p--  219 (258)
T 3a28_C          150 I-------LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ-IDAELSKINGKPIGENFKEYSSSIA--  219 (258)
T ss_dssp             T-------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH-HHHHHHHHHCCCTTHHHHHHHTTCT--
T ss_pred             C-------chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh-hhhhhccccCCchHHHHHHHHhcCC--
Confidence            1       11123456555544432       38999999999986642110 00           001111111111  


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                             ...+.+.+|+|++++.++.++.. ..|+++++.+|..+
T Consensus       220 -------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          220 -------LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             -------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             -------CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence                   12367899999999999976543 45689999988643

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.60  E-value=6.7e-15  Score=133.58  Aligned_cols=199  Identities=12%  Similarity=0.107  Sum_probs=128.8

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      ++++||||    ||+  |+||++++++|+++|++|++++|+.+ ..+       ...++..  .++.++.+|   .++++
T Consensus        20 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~-------~~~~l~~~~~~~~~~~~Dl~~~~~v~   87 (285)
T 2p91_A           20 EGKRALIT----GVANERSIAYGIAKSFHREGAQLAFTYATPK-LEK-------RVREIAKGFGSDLVVKCDVSLDEDIK   87 (285)
T ss_dssp             TTCEEEEC----CCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHH-------HHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHH-------HHHHHHHhcCCeEEEEcCCCCHHHHH
Confidence            45789999    999  99999999999999999999999763 110       0111111  124566666   55666


Q ss_pred             hhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhCC---CcEEEEeccccccCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG---VKQFLFISSAGIYKP  193 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~g---v~~~i~~Ss~~vy~~  193 (349)
                      ++++..     ++|+|||+||.                        |+.++.++++++...-   ..+||++||...+..
T Consensus        88 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  167 (285)
T 2p91_A           88 NLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV  167 (285)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC
Confidence            665432     47999999983                        2345667777765542   369999999765432


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...       ...|..+|.+++.+.+.       .|+++.+++||.++++..... ....+...+....++         
T Consensus       168 ~~~-------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------  231 (285)
T 2p91_A          168 VPH-------YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------  231 (285)
T ss_dssp             CTT-------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------
T ss_pred             CCC-------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------
Confidence            211       11123456665554432       389999999999999864321 112233333333222         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+.+++|+|++++.++.++.. ..|++|++.+|.
T Consensus       232 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          232 GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            1246899999999999976433 356899999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.60  E-value=4.9e-15  Score=133.03  Aligned_cols=201  Identities=12%  Similarity=0.126  Sum_probs=129.4

Q ss_pred             ceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           74 KKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        74 ~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      +|+||||    ||+  |+||++++++|+++|++|++++|+. ...+       ...++..  ....++.+|   ++++++
T Consensus         9 ~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~-------~~~~l~~~~~~~~~~~~D~~~~~~v~~   76 (265)
T 1qsg_A            9 GKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQND-KLKG-------RVEEFAAQLGSDIVLQCDVAEDASIDT   76 (265)
T ss_dssp             TCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHH-------HHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             CCEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHH-------HHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence            4789999    999  9999999999999999999999976 2111       1111111  123455566   556665


Q ss_pred             hhcCC-----CccEEEeCCCCC-------------------------hhhHHHHHHHHHhCC--CcEEEEeccccccCCC
Q 018900          147 VVGGV-----TFDVVLDNNGKN-------------------------LDAVRPVADWAKSSG--VKQFLFISSAGIYKPA  194 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~  194 (349)
                      +++..     ++|+|||+||..                         +.++.++++++...-  ..+||++||...+...
T Consensus        77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  156 (265)
T 1qsg_A           77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI  156 (265)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC
Confidence            55422     489999999842                         234566777776541  2589999997665321


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ...|..+|.+++.+.+.       .++++.++|||+++++..... ....+...+....++         .
T Consensus       157 ~~-------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~  220 (265)
T 1qsg_A          157 PN-------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------R  220 (265)
T ss_dssp             TT-------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------S
T ss_pred             CC-------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------C
Confidence            11       11123456665555432       279999999999998754321 122233333333322         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .+.+.+|+|++++.++.++.. ..|++|++.+|..++
T Consensus       221 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          221 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            256899999999999976543 356899999986443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.60  E-value=1.8e-15  Score=136.26  Aligned_cols=199  Identities=17%  Similarity=0.207  Sum_probs=129.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC-CcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|... ..+++.       .++.  ...+.++.+|   .++++
T Consensus        26 l~~k~vlVT----Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~d~~~v~   94 (269)
T 4dmm_A           26 LTDRIALVT----GASRGIGRAIALELAAAGAKVAVNYASSAGAADEVV-------AAIAAAGGEAFAVKADVSQESEVE   94 (269)
T ss_dssp             TTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHH
Confidence            356899999    99999999999999999999999998542 221110       1111  1244556666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....
T Consensus        95 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  174 (269)
T 4dmm_A           95 ALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG  174 (269)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC
Confidence            665533     47999999993                    345555555544    5556679999999765432211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...|..+|.+++.+.+       ..|+++..++||.+..+.....    ....+....++         ..+.
T Consensus       175 -------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~p~---------~r~~  234 (269)
T 4dmm_A          175 -------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----AAEKLLEVIPL---------GRYG  234 (269)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----HHHHHGGGCTT---------SSCB
T ss_pred             -------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----cHHHHHhcCCC---------CCCC
Confidence                   1112335555444332       2389999999999988754321    11222222221         2357


Q ss_pred             eHHHHHHHHHHHhcCCCc--cCCCEEEeeCCCcc
Q 018900          270 HVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAV  301 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~--~~~~~~~i~~~~~~  301 (349)
                      +.+|+|++++.++.++..  ..|+++++.+|..+
T Consensus       235 ~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          235 EAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             CHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            889999999999988432  45799999988654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.60  E-value=1.3e-15  Score=136.88  Aligned_cols=200  Identities=14%  Similarity=0.149  Sum_probs=128.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ...+.++.+|   .++++++
T Consensus        10 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (264)
T 3ucx_A           10 TDKVVVIS----GVGPALGTTLARRCAEQGADLVLAARTVERLEDVA-------KQVTDTGRRALSVGTDITDDAQVAHL   78 (264)
T ss_dssp             TTCEEEEE----SCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999865433211       1111  1245566666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||+|+.                     |+.++.++++++    ++.+ .+||++||...+..... 
T Consensus        79 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-  156 (264)
T 3ucx_A           79 VDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAK-  156 (264)
T ss_dssp             HHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTT-
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCc-
Confidence            5432     48999999973                     344555555543    3334 69999999776543211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCc----------hHHHHHHHHhCCCcccCC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~----------~~~~~~~~~~~~~~~~~~  260 (349)
                            ...|..+|.+++.+.+    |   .|+++..++||.++++......          ...+...+..+.+     
T Consensus       157 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  225 (264)
T 3ucx_A          157 ------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD-----  225 (264)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS-----
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC-----
Confidence                  1122335555544433    2   4899999999999876422100          0111222222221     


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                          ...+.+.+|+|++++.++.+... ..|+++++.+|+.
T Consensus       226 ----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          226 ----LKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             ----SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             ----cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence                23467899999999999976543 4579999999863

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.60  E-value=1.2e-15  Score=138.12  Aligned_cols=190  Identities=15%  Similarity=0.128  Sum_probs=120.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec----CCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~D---~~~l  144 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++..    ..+.++.+|   ++++
T Consensus        30 l~~k~vlVT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~v   98 (279)
T 1xg5_A           30 WRDRLALVT----GASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-------AECKSAGYPGTLIPYRCDLSNEEDI   98 (279)
T ss_dssp             GTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-------HHHHhcCCCceEEEEEecCCCHHHH
Confidence            356899999    99999999999999999999999999764332211       11111    134556666   5666


Q ss_pred             HhhhcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCC--cEEEEeccccccCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV--KQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv--~~~i~~Ss~~vy~~  193 (349)
                      .++++..     ++|+|||+||.                    |+.+    ++++++.+++.+.  ++||++||...+..
T Consensus        99 ~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  178 (279)
T 1xg5_A           99 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  178 (279)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence            6665522     47999999983                    2333    7788888888875  79999999877642


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH---------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      ....     ....|..+|.+++.+.+         ..++++.+++||.+..+..         .......+..... ...
T Consensus       179 ~~~~-----~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---------~~~~~~~~~~~~~-~~~  243 (279)
T 1xg5_A          179 LPLS-----VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---------FKLHDKDPEKAAA-TYE  243 (279)
T ss_dssp             CSCG-----GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---------HHHTTTCHHHHHH-HHC
T ss_pred             CCCC-----CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---------hhhcccChhHHhh-hcc
Confidence            1100     01112235555444332         3479999999999876531         1111110000000 001


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      ...+++.+|+|++++.++.++..
T Consensus       244 ~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          244 QMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCTT
T ss_pred             cccCCCHHHHHHHHHHHhcCCcc
Confidence            12468999999999999987654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.60  E-value=4.5e-15  Score=133.95  Aligned_cols=202  Identities=16%  Similarity=0.189  Sum_probs=129.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|... ..+.       ..++.  ...+.++.+|   .+++.+
T Consensus        29 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~-------~~~~~~~~~~~~~~~~Dv~d~~~v~~   96 (273)
T 3uf0_A           29 LAGRTAVVT----GAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEV-------ADEIADGGGSAEAVVADLADLEGAAN   96 (273)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHH-------HHHHHTTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHH-------HHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            357899999    99999999999999999999999997642 1110       01111  1234566666   444544


Q ss_pred             hhcC----CCccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          147 VVGG----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       147 ~~~~----~~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +.+.    -++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....  
T Consensus        97 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--  174 (273)
T 3uf0_A           97 VAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN--  174 (273)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--
T ss_pred             HHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC--
Confidence            4321    148999999993                    445555555544    5567789999999776543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ...|..+|.+++.+.+.       .|+++..++||.+..+..... ........+....+.         ..+.+
T Consensus       175 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  240 (273)
T 3uf0_A          175 -----VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA---------GRWAT  240 (273)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT---------SSCBC
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC---------CCCCC
Confidence                 11123455555444332       489999999999988643211 011122223332221         23578


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+|+|++++.++.++.. ..|+++++.+|..+
T Consensus       241 pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          241 PEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            99999999999987543 45799999998643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.60  E-value=2.7e-15  Score=136.91  Aligned_cols=206  Identities=16%  Similarity=0.167  Sum_probs=129.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC--cccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+.  ..++..    .. +-....+.++.+|   .+++++
T Consensus        47 l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           47 LKDRKALVT----GGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKA----LI-EECGRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHH----HH-HHTTCCEEECCCCTTSHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHH----HH-HHcCCcEEEEEecCCCHHHHHH
Confidence            357899999    999999999999999999999999886321  111000    00 0001234445555   555655


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhCCC--cEEEEeccccccCCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~gv--~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +++..     ++|++||+||.                     |+.++.++++++...-.  .+||++||...+.....  
T Consensus       118 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--  195 (294)
T 3r3s_A          118 LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH--  195 (294)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC--
Confidence            55422     47999999993                     45667788887766533  49999999877654221  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.+++.+.+    |   .|+++..++||.++++.....        .........+........+.+.
T Consensus       196 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~p~~r~~~p  262 (294)
T 3r3s_A          196 -----LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG--------GQTQDKIPQFGQQTPMKRAGQP  262 (294)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT--------TSCGGGSTTTTTTSTTSSCBCG
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc--------CCCHHHHHHHHhcCCCCCCcCH
Confidence                 1112345555544433    2   389999999999987531000        0000001111112222346789


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|+|++++.++.++.. ..|+++++.+|..+
T Consensus       263 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          263 AELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            9999999999976643 45799999998654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.59  E-value=1.5e-15  Score=136.89  Aligned_cols=204  Identities=15%  Similarity=0.155  Sum_probs=127.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++  .++.++.+|   .++++++++
T Consensus         8 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~--~~~~~~~~Dv~d~~~v~~~~~   74 (270)
T 1yde_A            8 AGKVVVVT----GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALE-------QEL--PGAVFILCDVTQEDDVKTLVS   74 (270)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHC--TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh--cCCeEEEcCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999864432211       011  134556666   566666665


Q ss_pred             CC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHh---CCCcEEEEecccc-ccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS---SGVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                      ..     ++|+|||+||.                     |+.++.++++++..   .+..+||++||.. .++....   
T Consensus        75 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  151 (270)
T 1yde_A           75 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQA---  151 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTC---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCC---
Confidence            32     47999999983                     23455556555532   1246999999965 3432211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCccee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                           ..|..+|.+++.+.+.       .|+++.++|||+++++....     .-....+.......++         ..
T Consensus       152 -----~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r  217 (270)
T 1yde_A          152 -----VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GR  217 (270)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SS
T ss_pred             -----cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC---------CC
Confidence                 1233456665554432       48999999999998863110     0000001111111111         12


Q ss_pred             eeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHH
Q 018900          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  306 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el  306 (349)
                      +.+.+|+|++++.++.+.....|+.+++.+|..+.+.+.
T Consensus       218 ~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          218 MGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             CcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcC
Confidence            568999999999988764344678999999876654433

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.59  E-value=5.1e-16  Score=140.00  Aligned_cols=201  Identities=14%  Similarity=0.141  Sum_probs=129.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ...+..+.+|   .++++++
T Consensus        27 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           27 DKQVAIVT----GASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-------AAFKQAGLEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEEeCCCHHHHHHH
Confidence            46899999    99999999999999999999999999865433211       1111  1234555666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....  
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  173 (270)
T 3ftp_A           96 VESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG--  173 (270)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC--
Confidence            5532     47999999993                    445566666654    4445679999999765432211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.+++.+.+    |   .|+++..++||.+..+.... ........+....+         ...+.+.
T Consensus       174 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~p---------~~r~~~p  238 (270)
T 3ftp_A          174 -----QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQIP---------LGRLGSP  238 (270)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTCT---------TCSCBCH
T ss_pred             -----chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcCC---------CCCCCCH
Confidence                 1112335555444333    2   38999999999987653211 11112222222222         1346789


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +|+|++++.++..+.. ..|+++++.+|..+
T Consensus       239 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          239 EDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            9999999999876543 45699999998644

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.59  E-value=2.6e-15  Score=136.08  Aligned_cols=205  Identities=16%  Similarity=0.105  Sum_probs=132.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ...+.++.+|   .++++.+
T Consensus         7 ~gk~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (280)
T 3tox_A            7 EGKIAIVT----GASSGIGRAAALLFAREGAKVVVTARNGNALAELT-------DEIAGGGGEAAALAGDVGDEALHEAL   75 (280)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-------HHHTTTTCCEEECCCCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46889999    99999999999999999999999999865433211       1111  1233444455   5666666


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||+||.                     |+.++.++++    .+++.+..++|++||...+....  
T Consensus        76 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  153 (280)
T 3tox_A           76 VELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF--  153 (280)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC--
Confidence            6532     47999999983                     3344445544    44556677999999977652110  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCC---chHHHHHHHHhCCCcccCCCCCccee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                      +    ....|..+|.+++.+.+    |   .|+++..++||.+..+.....   ........+....++         ..
T Consensus       154 ~----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r  220 (280)
T 3tox_A          154 A----GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL---------KR  220 (280)
T ss_dssp             T----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT---------SS
T ss_pred             C----CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc---------CC
Confidence            0    01112335555544433    2   389999999999988754321   112222223222221         23


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                      +.+.+|+|++++.++.++.. ..|+++++.+|..++.
T Consensus       221 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          221 IARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            67899999999999987643 4679999999976554

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.59  E-value=1.1e-14  Score=127.29  Aligned_cols=186  Identities=15%  Similarity=0.137  Sum_probs=127.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~-  151 (349)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+                      .+..|+++++++++.. 
T Consensus         5 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g   58 (223)
T 3uce_A            5 DKTVYVVL----GGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIG   58 (223)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhC
Confidence            46889999    99999999999999999999999999763                      1223677777777654 


Q ss_pred             CccEEEeCCCC---------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCCCCCCCCCC
Q 018900          152 TFDVVLDNNGK---------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (349)
Q Consensus       152 ~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~  208 (349)
                      ++|++||+||.                     |+.++.++++++...-  ..++|++||...+.....       ...|.
T Consensus        59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------~~~Y~  131 (223)
T 3uce_A           59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN-------TYVKA  131 (223)
T ss_dssp             SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT-------CHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC-------chHHH
Confidence            48999999993                     3456777777776542  248999999876543211       11122


Q ss_pred             CChHHHHHHHH----hh-CCcEEEEecCceeeCCCCCCc---hHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHH
Q 018900          209 AGHVQVEKYIS----EN-FSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  280 (349)
Q Consensus       209 ~~k~~~ek~~~----~~-~~~~~ilR~~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  280 (349)
                      .+|.+++.+.+    |. .+++..++||.+..+......   ...+........+.         ..+.+.+|+|++++.
T Consensus       132 asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~~~~  202 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMAYLF  202 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHHHHH
Confidence            35655554443    33 389999999999887543321   11222333333322         235689999999999


Q ss_pred             HhcCCCccCCCEEEeeCCCcc
Q 018900          281 AVENPEAASSNIFNLVSDRAV  301 (349)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~~~  301 (349)
                      +++... ..|+++++.+|..+
T Consensus       203 l~~~~~-~tG~~i~vdgG~~~  222 (223)
T 3uce_A          203 AIQNSY-MTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHCTT-CCSCEEEESTTGGG
T ss_pred             HccCCC-CCCcEEEecCCeec
Confidence            998543 34699999988654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.59  E-value=1.1e-15  Score=138.16  Aligned_cols=207  Identities=12%  Similarity=0.121  Sum_probs=132.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+...    .+.......+.++.+|   .+++++++
T Consensus        25 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (277)
T 4fc7_A           25 LRDKVAFIT----GGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAAR----KLAGATGRRCLPLSMDVRAPPAVMAAV   96 (277)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            357899999    999999999999999999999999998644322110    0001112345566666   55666655


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....   
T Consensus        97 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  173 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL---  173 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT---
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC---
Confidence            432     48999999982                    455666666655    3345679999999765432211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ...|..+|.+++.+.+.       .|+++..++||.+.++.....  .............++         ..+.+
T Consensus       174 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  240 (277)
T 4fc7_A          174 ----QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL---------QRLGN  240 (277)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT---------SSCBC
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC---------CCCcC
Confidence                11122355555444332       389999999999987631100  011223333333332         23568


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .+|+|++++.++.+... .+|+++++.+|..++
T Consensus       241 p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          241 KTEIAHSVLYLASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence            99999999999986543 467999999986443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.59  E-value=2.2e-15  Score=136.64  Aligned_cols=223  Identities=16%  Similarity=0.151  Sum_probs=134.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC-CCccc----cee--cCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNRFN----EIV--SAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~-~~~~~----~l~--~~~~~~~~~D---~  141 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+........... .....    ++.  ...+.++.+|   .
T Consensus         8 l~gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            8 VQDKVVLVT----GGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            356899999    99999999999999999999999999743221100000 00000    111  2345566666   5


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCC
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~  196 (349)
                      +++.++++..     ++|+|||+||.                  |+.++.++++++...  +..++|++||...+.....
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  163 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ  163 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc
Confidence            5665555432     47999999993                  456677888877654  3458999999765543222


Q ss_pred             CCCCCCCCC----CCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC---CCc-----c
Q 018900          197 PPHVEGDVV----KPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK---RPV-----P  257 (349)
Q Consensus       197 ~~~~e~~~~----~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~---~~~-----~  257 (349)
                      .+..+..+.    .|..+|.+++.+.+    +   .|+++..++||++..+......   ........   ...     .
T Consensus       164 ~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~  240 (287)
T 3pxx_A          164 PPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP---MYRQFRPDLEAPSRADALLA  240 (287)
T ss_dssp             CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHH---HHHHHCTTSSSCCHHHHHHH
T ss_pred             cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc---hhhhhccccccchhHHHHhh
Confidence            232222211    12234555444332    2   3899999999999887654311   01111100   000     0


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      ..........+.+.+|+|++++.++.+... ..|+++++.+|..+
T Consensus       241 ~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          241 FPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             GGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            000111124578999999999999976543 45799999998644

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.59  E-value=1.6e-14  Score=130.53  Aligned_cols=204  Identities=13%  Similarity=0.118  Sum_probs=132.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+...++...    ... ....+.++.+|   .+++.+++
T Consensus        32 l~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~  102 (279)
T 3ctm_A           32 LKGKVASVT----GSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHL----QKT-YGVHSKAYKCNISDPKSVEETI  102 (279)
T ss_dssp             CTTCEEEET----TTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHH----HHH-HCSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcceEEEeecCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987543221100    000 02245566676   55666666


Q ss_pred             cCC-----CccEEEeCCCCC----------------------hhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGKN----------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~~----------------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +..     ++|+|||+||..                      +.+    ++++++.+++.+.++||++||...+..... 
T Consensus       103 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  181 (279)
T 3ctm_A          103 SQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIP-  181 (279)
T ss_dssp             HHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----
T ss_pred             HHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCC-
Confidence            542     379999998731                      222    567888888778889999999765432100 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          .....|..+|.+++.+.+.       .+ ++.+++||.+..+..... ...+...+....+.         ..+++
T Consensus       182 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p~---------~~~~~  246 (279)
T 3ctm_A          182 ----QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMKAKWWQLTPL---------GREGL  246 (279)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHHHHHHHHSTT---------CSCBC
T ss_pred             ----CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHHHHHHHhCCc---------cCCcC
Confidence                0011123456666655543       26 899999999987754321 12222222221111         23678


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      .+|+|++++.++.++.. ..|+++++.+|..
T Consensus       247 ~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          247 TQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             GGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            99999999999987533 4568999998853

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.59  E-value=1.8e-15  Score=136.13  Aligned_cols=206  Identities=18%  Similarity=0.213  Sum_probs=130.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee----cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.    ...+..+.+|   .++++
T Consensus         9 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~~   77 (267)
T 3t4x_A            9 KGKTALVT----GSTAGIGKAIATSLVAEGANVLINGRREENVNETI-------KEIRAQYPDAILQPVVADLGTEQGCQ   77 (267)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHHCTTCEEEEEECCTTSHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhhCCCceEEEEecCCCCHHHHH
Confidence            45789999    99999999999999999999999999865433211       1111    1224455566   66677


Q ss_pred             hhhcCC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          146 NVVGGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       146 ~~~~~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ++++.. ++|++||+||.                    |+.+    ++.++..+++.+..++|++||...+.....    
T Consensus        78 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  153 (267)
T 3t4x_A           78 DVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE----  153 (267)
T ss_dssp             HHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc----
Confidence            777655 48999999993                    3344    445566666677789999999776533211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC----------CchHHHHHHHHhC-CCcccCCCC
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRK-RPVPIPGSG  262 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~  262 (349)
                         ...|..+|.+++.+.+.       .++++..++||.+..+....          ............. .+.      
T Consensus       154 ---~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  224 (267)
T 3t4x_A          154 ---MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPT------  224 (267)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTT------
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCc------
Confidence               11123355555544432       26889999999887652100          0001111111111 110      


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .....+.+.+|+|++++.++.+... .+|+++++.+|...+
T Consensus       225 ~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          225 SIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             CSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             ccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            0123578899999999999886543 467999999986544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.59  E-value=2.4e-14  Score=129.78  Aligned_cols=201  Identities=15%  Similarity=0.126  Sum_probs=128.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.. +.+       ..++.  ...+.++.+|   .+++.+
T Consensus        28 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   96 (283)
T 1g0o_A           28 EGKVALVT----GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV-------VAAIKKNGSDAACVKANVGVVEDIVR   96 (283)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH-------HHHHHHhCCCeEEEEcCCCCHHHHHH
Confidence            46899999    9999999999999999999999999986421 110       01111  1235556666   455555


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +++..     ++|+|||+||.                    |+.++.++++++...  +..+||++||...+.....   
T Consensus        97 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---  173 (283)
T 1g0o_A           97 MFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP---  173 (283)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS---
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC---
Confidence            54422     47999999983                    456677788877664  5679999999765432110   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC----------chHHHHHHHHh--CCCcccCC
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVR--KRPVPIPG  260 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~~--~~~~~~~~  260 (349)
                         ....|..+|.+++.+.+       ..|+++.+++||.+.++.....          ........+..  ..+     
T Consensus       174 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  245 (283)
T 1g0o_A          174 ---KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP-----  245 (283)
T ss_dssp             ---SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT-----
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC-----
Confidence               01123345666555443       2389999999999977531100          00111122211  111     


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                          ...+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       246 ----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          246 ----LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence                12367899999999999986543 456899998874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.58  E-value=1.4e-15  Score=140.63  Aligned_cols=223  Identities=12%  Similarity=0.095  Sum_probs=136.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-CC-CCCC-Ccccceec--CCCeEEEcC---hhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MK-KPPF-NRFNEIVS--AGGKTVWGD---PAE  143 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~-~~~~-~~~~~l~~--~~~~~~~~D---~~~  143 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+...... .. .... ....++..  ..+.++.+|   .++
T Consensus        25 l~gk~vlVT----Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           25 VDGRVVIVT----GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            356899999    999999999999999999999999987210000 00 0000 00111211  234455566   566


Q ss_pred             HHhhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC----C------CcEEEEeccc
Q 018900          144 VGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----G------VKQFLFISSA  188 (349)
Q Consensus       144 l~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~----g------v~~~i~~Ss~  188 (349)
                      +.++++..     ++|+|||+||.                    |+.++.++++++...    +      -.+||++||.
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            66665532     47999999993                    345555666654322    1      1599999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCC
Q 018900          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS  261 (349)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (349)
                      ..+.....       ...|..+|.+++.+.+.       .|+++..++|| +..+........ ..            ..
T Consensus       181 ~~~~~~~~-------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~~------------~~  239 (322)
T 3qlj_A          181 AGLQGSVG-------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-MM------------AT  239 (322)
T ss_dssp             HHHHCBTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-----------------
T ss_pred             HHccCCCC-------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-hh------------hc
Confidence            65432111       11123456555544432       48999999999 544432221000 00            01


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc-----------------CHHHHHHHHHHHhCCCce
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV-----------------TLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~-----------------t~~el~~~~~~~~g~~~~  319 (349)
                      ......+++.+|+|++++.++.+... ..|+++++.+|...                 +..|+++.+.+.+|.+.+
T Consensus       240 ~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          240 QDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             ----CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred             cccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence            11223456899999999999976644 45689999887643                 779999999999986533

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.58  E-value=1.8e-14  Score=127.74  Aligned_cols=191  Identities=13%  Similarity=0.120  Sum_probs=126.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|+||||    ||+|+||++++++|++ .|+.|++++|+.+...               ..+..+.+|   .+++.+++
T Consensus         3 ~~k~vlIT----Gas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~   63 (244)
T 4e4y_A            3 AMANYLVT----GGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------------ENLKFIKADLTKQQDITNVL   63 (244)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------------TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCeEEEe----CCCChHHHHHHHHHHhcCCcEEEEecccccccc---------------ccceEEecCcCCHHHHHHHH
Confidence            57899999    9999999999999999 7899999998764211               123455555   56666655


Q ss_pred             cC---CCccEEEeCCCC--------------------ChhhHHHHHHHHHhCCC--cEEEEeccccccCCCCCCCCCCCC
Q 018900          149 GG---VTFDVVLDNNGK--------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       149 ~~---~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv--~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      +.   .++|++||+||.                    |+.++.++++++...-.  .++|++||...+.....       
T Consensus        64 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  136 (244)
T 4e4y_A           64 DIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN-------  136 (244)
T ss_dssp             HHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT-------
T ss_pred             HHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC-------
Confidence            42   258999999994                    45667777777755422  48999999776543211       


Q ss_pred             CCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHH-----------HHHHHHhCCCcccCCCCCcc
Q 018900          204 VVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEW-----------FFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...|..+|.+++.+.+       ..|+++..++||.+..+.... ....           .........         ..
T Consensus       137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------p~  206 (244)
T 4e4y_A          137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKEF---------PL  206 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTTS---------TT
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhcC---------CC
Confidence            1122345655555443       348999999999997653211 0000           111111111         12


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       207 ~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          207 NRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence            3467899999999999987644 456999999875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.58  E-value=1.7e-15  Score=135.10  Aligned_cols=195  Identities=15%  Similarity=0.118  Sum_probs=124.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---h-hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---P-AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~-~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++ |++++|+.+.. .+.     .+.+. ...++.++.+|   . +++++
T Consensus         4 ~~k~vlVt----Gas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~-~~~-----~l~~~~~~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            4 TNKNVIFV----AALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALA-----ELKAINPKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-HHH-----HHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCcEEEEEecCchHH-HHH-----HHHHhCCCceEEEEEEecCCChHHHHH
Confidence            46789999    99999999999999999996 99999976311 000     00011 01245566677   4 55666


Q ss_pred             hhcCC-----CccEEEeCCCC------------ChhhHHHHHHHHHh----CC---CcEEEEeccccccCCCCCCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK------------NLDAVRPVADWAKS----SG---VKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~------------~~~~~~~ll~~a~~----~g---v~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      +++..     ++|+|||+||.            |+.++.++++++..    .+   ..+||++||...+.....      
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  147 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ------  147 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT------
T ss_pred             HHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC------
Confidence            55432     47999999983            45667777776543    22   368999999877643211      


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC--ch--HHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD--CE--EWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                       ...|..+|.+++.+.+.       .++++.+++||.+.++.....  ..  ..........            ..+.++
T Consensus       148 -~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~  214 (254)
T 1sby_A          148 -VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS------------HPTQTS  214 (254)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT------------SCCEEH
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc------------CCCCCH
Confidence             11233456666554433       489999999999987632110  00  0001111111            123489


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      +|+|++++.+++..  ..|++|++.+|
T Consensus       215 ~dvA~~i~~~~~~~--~~G~~~~v~gG  239 (254)
T 1sby_A          215 EQCGQNFVKAIEAN--KNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHHHHHC--CTTCEEEEETT
T ss_pred             HHHHHHHHHHHHcC--CCCCEEEEeCC
Confidence            99999999998743  33689999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.57  E-value=6.9e-14  Score=126.34  Aligned_cols=215  Identities=12%  Similarity=0.062  Sum_probs=129.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCC--CCCccc----cee--cCCCeEEEcC---h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFN----EIV--SAGGKTVWGD---P  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~--~~~~~~----~l~--~~~~~~~~~D---~  141 (349)
                      ++|+||||    ||+|.||++++++|+++|++|++++|..+........  ......    ++.  ...+..+.+|   .
T Consensus        10 ~~k~~lVT----Gas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (277)
T 3tsc_A           10 EGRVAFIT----GAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF   85 (277)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            46899999    9999999999999999999999999854211100000  000000    111  1245556666   5


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CcEEEEecccccc
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIY  191 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~g-v~~~i~~Ss~~vy  191 (349)
                      +++.++++..     ++|++||+||.                    |+.++.+++++    +++.+ ..+||++||...+
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  165 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence            5666655431     48999999993                    34455555554    44444 4699999997765


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc-ccCCCCC
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGM  263 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  263 (349)
                      .....       ...|..+|.+++.+.+.       .|+++..++||.+..+.................... ...... 
T Consensus       166 ~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  237 (277)
T 3tsc_A          166 KMQPF-------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF-  237 (277)
T ss_dssp             SCCSS-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS-
T ss_pred             CCCCC-------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc-
Confidence            43211       11123355555444332       389999999999987754332111112211111111 111111 


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ....+.+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       238 ~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          238 LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            112478999999999999987644 457999999885

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.57  E-value=1.2e-14  Score=130.49  Aligned_cols=210  Identities=14%  Similarity=0.149  Sum_probs=133.4

Q ss_pred             cccceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhh
Q 018900           71 AAEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAE  143 (349)
Q Consensus        71 ~~~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~  143 (349)
                      ...+|+||||    ||+  |+||++++++|+++|++|++++|+......        ..++.  ...+.++.+|   .++
T Consensus        11 ~~~~k~vlIT----Ga~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~Dv~~~~~   78 (271)
T 3ek2_A           11 FLDGKRILLT----GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR--------ITEFAAEFGSELVFPCDVADDAQ   78 (271)
T ss_dssp             TTTTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH--------HHHHHHHTTCCCEEECCTTCHHH
T ss_pred             ccCCCEEEEe----CCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH--------HHHHHHHcCCcEEEECCCCCHHH
Confidence            4467899999    999  999999999999999999999998432211        11111  1235666666   566


Q ss_pred             HHhhhcCC-----CccEEEeCCCC-------------------------ChhhHHHHHHHHHhC--CCcEEEEecccccc
Q 018900          144 VGNVVGGV-----TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIY  191 (349)
Q Consensus       144 l~~~~~~~-----~~d~Vi~~a~~-------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy  191 (349)
                      +.++++..     ++|+|||+||.                         |+.++.++++++...  +..++|++||...+
T Consensus        79 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  158 (271)
T 3ek2_A           79 IDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE  158 (271)
T ss_dssp             HHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc
Confidence            66666533     58999999983                         234566677766543  23589999997765


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCC
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      .....       ...|..+|.+++.+.+.       .|+++..++||.+..+..... ....+...+....++       
T Consensus       159 ~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-------  224 (271)
T 3ek2_A          159 RAIPN-------YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL-------  224 (271)
T ss_dssp             SBCTT-------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT-------
T ss_pred             cCCCC-------ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc-------
Confidence            43211       01122345555444332       389999999999988754432 112333333333332       


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHH
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAK  308 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~  308 (349)
                        ..+.+.+|+|++++.++.+... .+|+++++.+|..++..++.+
T Consensus       225 --~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          225 --KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             --SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             --CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence              2346789999999999986533 467999999998777766544

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.57  E-value=2.3e-14  Score=128.77  Aligned_cols=199  Identities=16%  Similarity=0.191  Sum_probs=129.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++++||||    ||+|+||++++++|+++|++|+++.+.. +...+.       ..++.  ..++.++.+|   .+++.
T Consensus        24 l~~k~vlVT----Gas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~Dl~~~~~~~   92 (267)
T 4iiu_A           24 AMSRSVLVT----GASKGIGRAIARQLAADGFNIGVHYHRDAAGAQET-------LNAIVANGGNGRLLSFDVANREQCR   92 (267)
T ss_dssp             -CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHH-------HHHHHhcCCceEEEEecCCCHHHHH
Confidence            356899999    9999999999999999999998876543 222110       01111  1245666666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHH-----hCCCcEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~-----~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++++.     +.+..+||++||...+....
T Consensus        93 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  172 (267)
T 4iiu_A           93 EVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR  172 (267)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC
Confidence            655432     47999999983                    4556667777652     45668999999966443221


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                      .       ...|..+|.+.+.+.+    +   .++++..++||.+..+.....  ...........+.         ..+
T Consensus       173 ~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~  234 (267)
T 4iiu_A          173 G-------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRM  234 (267)
T ss_dssp             T-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSC
T ss_pred             C-------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCC
Confidence            1       1112234554333332    2   389999999999988765432  3334444444332         235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+.+|+|++++.++.++.. ..|+++++.+|.
T Consensus       235 ~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          235 GQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            6899999999999987543 457999998873

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.57  E-value=6.5e-15  Score=132.53  Aligned_cols=202  Identities=12%  Similarity=0.161  Sum_probs=126.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccce--ecCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|.... ..+.       ..++  ...++.++.+|   .+++++
T Consensus        24 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dl~~~~~v~~   92 (269)
T 3gk3_A           24 AKRVAFVT----GGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTW-------LMHERDAGRDFKAYAVDVADFESCER   92 (269)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHH-------HHHHHTTTCCCEEEECCTTCHHHHHH
T ss_pred             cCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH-------HHHHHhcCCceEEEEecCCCHHHHHH
Confidence            46789999    999999999999999999999999854422 1110       0011  12346667776   555655


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.++.+++++    +++.+..+||++||...+..... 
T Consensus        93 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  171 (269)
T 3gk3_A           93 CAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG-  171 (269)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC-
Confidence            55432     47999999993                    34455555554    44456689999999765432211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+.+.+.+    +   .|+++..++||.+..+.....     ..........    .......+.+
T Consensus       172 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~----~~~~~~~~~~  236 (269)
T 3gk3_A          172 ------QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV-----PQDVLEAKIL----PQIPVGRLGR  236 (269)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBC
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh-----chhHHHHHhh----hcCCcCCccC
Confidence                  1112234555444332    2   389999999999987754321     1111111110    1111234678


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+|+|++++.++.++.. .+|+++++.+|..+
T Consensus       237 p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          237 PDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             HHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            99999999999987643 46799999998654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.57  E-value=2.9e-15  Score=135.45  Aligned_cols=201  Identities=15%  Similarity=0.149  Sum_probs=130.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ...+.++.+|   .+++++
T Consensus        30 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~d~~~v~~   98 (276)
T 3r1i_A           30 LSGKRALIT----GASTGIGKKVALAYAEAGAQVAVAARHSDALQVVA-------DEIAGVGGKALPIRCDVTQPDQVRG   98 (276)
T ss_dssp             CTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-------HHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            356899999    99999999999999999999999999875543221       1111  1245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCC-cEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGV-KQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv-~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+. .++|++||...+.....
T Consensus        99 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~  178 (276)
T 3r1i_A           99 MLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP  178 (276)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC
Confidence            66533     47999999993                    344555555544    44443 68999999765432111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      .     ....|..+|.+++.+.+.       .++++..++||.+..+.....  ..+...+....++         ..+.
T Consensus       179 ~-----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~p~---------~r~~  242 (276)
T 3r1i_A          179 Q-----QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL--ADYHALWEPKIPL---------GRMG  242 (276)
T ss_dssp             S-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG--GGGHHHHGGGSTT---------SSCB
T ss_pred             C-----CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc--hHHHHHHHhcCCC---------CCCc
Confidence            0     111123456555544332       489999999999987754321  1122222222221         2356


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.+|+|++++.++.+... ..|+++++.+|.
T Consensus       243 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          243 RPEELTGLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             CGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence            889999999999986543 457999999885

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.57  E-value=1.3e-15  Score=137.48  Aligned_cols=203  Identities=14%  Similarity=0.136  Sum_probs=130.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.  ..++.++.+|   .+++.+
T Consensus        24 l~gk~~lVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~   92 (271)
T 4ibo_A           24 LGGRTALVT----GSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV-------QEFRNVGHDAEAVAFDVTSESEIIE   92 (271)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-------HHHHHTTCCEEECCCCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCceEEEEcCCCCHHHHHH
Confidence            357899999    99999999999999999999999999865433211       1111  1234445555   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.++.++++    .+++.+..+||++||...+..... 
T Consensus        93 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~-  171 (271)
T 4ibo_A           93 AFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT-  171 (271)
T ss_dssp             HHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT-
T ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC-
Confidence            66532     47999999993                    3445555544    445556679999999765432111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ...|..+|.+++.+.+.       .|+++..++||.+..+...... ...+...+....++         ..+.
T Consensus       172 ------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~  236 (271)
T 4ibo_A          172 ------VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWG  236 (271)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCB
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCc
Confidence                  11123355555444332       4899999999999876432110 01122223333322         2356


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +.+|+|++++.++.++.. ..|+++++.+|...
T Consensus       237 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          237 KPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence            789999999999876543 45799999998644

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.57  E-value=8.2e-15  Score=132.01  Aligned_cols=199  Identities=15%  Similarity=0.150  Sum_probs=124.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.. +.+.       .++.  ...+.++.+|   .+++.+
T Consensus        28 ~~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~   96 (271)
T 4iin_A           28 TGKNVLIT----GASKGIGAEIAKTLASMGLKVWINYRSNAEVADALK-------NELEEKGYKAAVIKFDAASESDFIE   96 (271)
T ss_dssp             SCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHhcCCceEEEECCCCCHHHHHH
Confidence            46899999    9999999999999999999999999965322 1100       0111  1245566666   555555


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHH----HHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~----ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.++.+    ++..+++.+..++|++||...+....+ 
T Consensus        97 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  175 (271)
T 4iin_A           97 AIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG-  175 (271)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC-
Confidence            55432     48999999994                    3334444    444445557789999999765432211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+++.+.+.       .++++..++||.+..+....     +......     ..........+.+
T Consensus       176 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----~~~~~~~-----~~~~~~~~~~~~~  239 (271)
T 4iin_A          176 ------QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----LKDELKA-----DYVKNIPLNRLGS  239 (271)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGGGCTTCSCBC
T ss_pred             ------chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----hcHHHHH-----HHHhcCCcCCCcC
Confidence                  11123356555544432       38899999999997764322     1111100     0111111234678


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.++.. ..|+++++.+|.
T Consensus       240 p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          240 AKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            99999999999987643 467999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.57  E-value=6e-15  Score=131.83  Aligned_cols=198  Identities=15%  Similarity=0.182  Sum_probs=124.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|..+...+          + ....+.++.+|   .++++++++
T Consensus         8 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~-~~~~~~~~~~D~~~~~~v~~~~~   72 (257)
T 3tl3_A            8 RDAVAVVT----GGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA----------D-LGDRARFAAADVTDEAAVASALD   72 (257)
T ss_dssp             --CEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH----------H-TCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH----------h-cCCceEEEECCCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999996533211          1 12345566666   555655554


Q ss_pred             CC----CccEEEeCCCC------------------------ChhhHHHHHHHHH----h--------CCCcEEEEecccc
Q 018900          150 GV----TFDVVLDNNGK------------------------NLDAVRPVADWAK----S--------SGVKQFLFISSAG  189 (349)
Q Consensus       150 ~~----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~----~--------~gv~~~i~~Ss~~  189 (349)
                      ..    ++|++||+||.                        |+.++.++++++.    +        .+..++|++||..
T Consensus        73 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           73 LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             HHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             HHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence            22    48999999983                        3344555555443    3        3346899999976


Q ss_pred             ccCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCC
Q 018900          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       190 vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (349)
                      .+.....       ...|..+|.+++.+.+       ..|+++..++||.+..+.... ........+....+.  .   
T Consensus       153 ~~~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~---  219 (257)
T 3tl3_A          153 AFDGQIG-------QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVPH--P---  219 (257)
T ss_dssp             --CCHHH-------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSSS--S---
T ss_pred             hcCCCCC-------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCCC--C---
Confidence            5432110       0112235555444433       238999999999998775432 222223333333221  1   


Q ss_pred             CcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                         ..+.+.+|+|++++.++.++ ..+|+++++.+|..+.
T Consensus       220 ---~r~~~p~dva~~v~~l~s~~-~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          220 ---SRLGNPDEYGALAVHIIENP-MLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             ---CSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTTC---
T ss_pred             ---CCccCHHHHHHHHHHHhcCC-CCCCCEEEECCCccCC
Confidence               23678999999999999874 4456999999986543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.57  E-value=5.7e-15  Score=132.76  Aligned_cols=206  Identities=16%  Similarity=0.167  Sum_probs=129.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..++...    .+.+.....+.++.+|   .+++++++
T Consensus        18 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dv~~~~~v~~~~   89 (266)
T 4egf_A           18 LDGKRALIT----GATKGIGADIARAFAAAGARLVLSGRDVSELDAARR----ALGEQFGTDVHTVAIDLAEPDAPAELA   89 (266)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHCCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            356899999    999999999999999999999999998654432110    0001012345666676   55666555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|++||+||.                    |+.++.++++++    ++.+ ..++|++||...+.....  
T Consensus        90 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  167 (266)
T 4egf_A           90 RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--  167 (266)
T ss_dssp             HHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC--
Confidence            432     47999999993                    344555555544    3433 469999999876543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ...|..+|.+++.+.+.       .|+++..++||.+..+...... .......+....++         ..+.+
T Consensus       168 -----~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  233 (266)
T 4egf_A          168 -----HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL---------GRFAV  233 (266)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT---------SSCBC
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC---------CCCcC
Confidence                 11123355554443332       3899999999999775311000 01112223222221         23568


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+|+|++++.++.+... .+|+++++.+|..+
T Consensus       234 p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          234 PHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            99999999999987543 46799999988643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.57  E-value=1.6e-15  Score=138.78  Aligned_cols=196  Identities=15%  Similarity=0.093  Sum_probs=115.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ...+.++.+|   .+++.++
T Consensus        30 ~gk~vlVT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           30 DGRAAVVT----GGASGIGLATATEFARRGARLVLSDVDQPALEQAV-------NGLRGQGFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCceEEEEccCCCHHHHHHH
Confidence            56899999    99999999999999999999999999875443211       1111  1245566666   5566666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+ ..+||++||...+..... 
T Consensus        99 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  177 (301)
T 3tjr_A           99 ADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG-  177 (301)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC-
Confidence            5532     48999999993                    445566666654    4444 579999999765532211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+++.+.+.       .|+++..++||.+..+..................+...++.......+++
T Consensus       178 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (301)
T 3tjr_A          178 ------LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVS  251 (301)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCC
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCC
Confidence                  11123355554444332       38999999999987642110000000000001112222232333456899


Q ss_pred             HHHHHHHHHHHhcCCC
Q 018900          271 VRDLSSMLTLAVENPE  286 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~  286 (349)
                      ++|+|+.++.+++.+.
T Consensus       252 pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          252 ADDVARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCC
Confidence            9999999999998753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.56  E-value=9.1e-15  Score=132.66  Aligned_cols=208  Identities=16%  Similarity=0.173  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.  ...+.++.+|   .++++++
T Consensus        27 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   95 (283)
T 3v8b_A           27 PSPVALIT----GAGSGIGRATALALAADGVTVGALGRTRTEVEEVA-------DEIVGAGGQAIALEADVSDELQMRNA   95 (283)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHTTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            46789999    99999999999999999999999999875443211       1111  1234555666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||+||.                     |+.++.++++++    ++.+..+||++||...+......
T Consensus        96 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~  175 (283)
T 3v8b_A           96 VRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTP  175 (283)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCST
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCC
Confidence            6533     48999999993                     344555666655    66677899999997654311100


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcc--eee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF--TNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  268 (349)
                           ....|..+|.+++.+.+.       .|+++..++||.+..+........   .......+..........  ..+
T Consensus       176 -----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~r~  247 (283)
T 3v8b_A          176 -----GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLR---HEEETAIPVEWPKGQVPITDGQP  247 (283)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBC---CHHHHSCCCBCTTCSCGGGTTCC
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccc---cchhhhhhhhhhhhcCccccCCC
Confidence                 111123455555544432       378999999999987754321100   001011111111111111  235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|++++.++.+... ..|+++++.+|.
T Consensus       248 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          248 GRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            7899999999999986543 457999998874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.56  E-value=3.1e-14  Score=127.77  Aligned_cols=205  Identities=8%  Similarity=0.057  Sum_probs=131.5

Q ss_pred             cceEEEEEecCCCcccc--hHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~--iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+  ||++++++|+++|++|++++|+....+.+...    ..+....++.++.+|   .++++++
T Consensus         6 ~~k~vlVT----Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~   77 (266)
T 3oig_A            6 EGRNIVVM----GVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHEL----AGTLDRNDSIILPCDVTNDAEIETC   77 (266)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----HHTSSSCCCEEEECCCSSSHHHHHH
T ss_pred             CCCEEEEE----cCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH----HHhcCCCCceEEeCCCCCHHHHHHH
Confidence            46899999    99988  99999999999999999999975322211000    001111256677776   5666666


Q ss_pred             hcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~  196 (349)
                      ++..     ++|+|||+|+.                        |+.++.++++++...-  ..+||++||...+.....
T Consensus        78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  157 (266)
T 3oig_A           78 FASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN  157 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT
T ss_pred             HHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC
Confidence            5533     47999999983                        2345566777765542  358999999765532111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                             ...|..+|.+++.+.+.       .|+++..++||.+..+..... ....+...+....+.         ..+
T Consensus       158 -------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~  221 (266)
T 3oig_A          158 -------YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRT  221 (266)
T ss_dssp             -------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSC
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCC
Confidence                   11122355555444332       389999999999987643321 112333333333322         234


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      .+.+|+|++++.++.++.. ..|+++++.+|...
T Consensus       222 ~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          222 TTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence            6889999999999987543 45799999988533

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.56  E-value=8.2e-15  Score=132.73  Aligned_cols=202  Identities=15%  Similarity=0.173  Sum_probs=119.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|.. +...+.       ..++.  ...+.++.+|   +++++
T Consensus        27 ~~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~d~~~v~   95 (280)
T 4da9_A           27 KARPVAIVT----GGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV-------IAELSGLGARVIFLRADLADLSSHQ   95 (280)
T ss_dssp             CCCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH-------HHHHHHTTCCEEEEECCTTSGGGHH
T ss_pred             cCCCEEEEe----cCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH-------HHHHHhcCCcEEEEEecCCCHHHHH
Confidence            346789999    9999999999999999999999999743 222111       01111  1245566666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC----------------------ChhhHHHHHHH----HHhCC---CcEEEEecccccc
Q 018900          146 NVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVADW----AKSSG---VKQFLFISSAGIY  191 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~----a~~~g---v~~~i~~Ss~~vy  191 (349)
                      ++++..     ++|+|||+||.                      |+.++.+++++    +++.+   ..+||++||...+
T Consensus        96 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~  175 (280)
T 4da9_A           96 ATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAV  175 (280)
T ss_dssp             HHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhc
Confidence            666532     47999999984                      34445444444    44433   5689999997654


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .....       ...|..+|.+++.+.+.       .|+++..++||.+..+..... ...+...+..+        ...
T Consensus       176 ~~~~~-------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~--------~~p  239 (280)
T 4da9_A          176 MTSPE-------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV-SGKYDGLIESG--------LVP  239 (280)
T ss_dssp             ----C-------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------
T ss_pred             cCCCC-------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc-chhHHHHHhhc--------CCC
Confidence            32111       11123455555544332       379999999999987653221 00011111110        111


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ...+.+.+|+|++++.++.+... ..|+++++.+|..
T Consensus       240 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          240 MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             --CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            23467899999999999987654 4579999998854

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.56  E-value=1.4e-14  Score=129.89  Aligned_cols=187  Identities=12%  Similarity=0.117  Sum_probs=122.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCC---CeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PA  142 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~  142 (349)
                      ..++++||||    ||+|+||++++++|+++|   ++|++++|+.+....+        .++.  ..++.++.+|   .+
T Consensus        18 ~~~~k~vlIT----GasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~--------~~l~~~~~~~~~~~~Dl~~~~   85 (267)
T 1sny_A           18 GSHMNSILIT----GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL--------EDLAKNHSNIHILEIDLRNFD   85 (267)
T ss_dssp             --CCSEEEES----CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH--------HHHHHHCTTEEEEECCTTCGG
T ss_pred             CCCCCEEEEE----CCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH--------HHhhccCCceEEEEecCCChH
Confidence            3457899999    999999999999999999   9999999987544321        1111  1246667776   56


Q ss_pred             hHHhhhcCC-------CccEEEeCCCC---------------------ChhhHHHHHHHHHhC----------C-----C
Q 018900          143 EVGNVVGGV-------TFDVVLDNNGK---------------------NLDAVRPVADWAKSS----------G-----V  179 (349)
Q Consensus       143 ~l~~~~~~~-------~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~----------g-----v  179 (349)
                      ++.++++..       ++|+|||+||.                     |+.++.++++++...          +     .
T Consensus        86 ~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~  165 (267)
T 1sny_A           86 AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGR  165 (267)
T ss_dssp             GHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTT
T ss_pred             HHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCC
Confidence            666666522       47999999983                     234555666655332          2     4


Q ss_pred             cEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHh
Q 018900          180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR  252 (349)
Q Consensus       180 ~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~  252 (349)
                      .+||++||...+......    .....+..+|.+++.+.+.       .+++++++|||++..+....            
T Consensus       166 ~~iv~isS~~~~~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------  229 (267)
T 1sny_A          166 AAIINMSSILGSIQGNTD----GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------  229 (267)
T ss_dssp             CEEEEECCGGGCSTTCCS----CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------
T ss_pred             ceEEEEecccccccCCCC----CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------
Confidence            689999998776542210    0011133456665554432       48999999999986653211            


Q ss_pred             CCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       253 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                                   ..+++.+|+|+.++.++..... .+|+.+.+.++
T Consensus       230 -------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          230 -------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             -------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             -------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence                         1246789999999999986543 45566665544

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.56  E-value=2.4e-15  Score=136.17  Aligned_cols=201  Identities=17%  Similarity=0.158  Sum_probs=126.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-----CCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-----AGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~D---~~~l  144 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++..     .++.++.+|   ++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dv~~~~~v   73 (280)
T 1xkq_A            5 SNKTVIIT----GSSNGIGRTTAILFAQEGANVTITGRSSERLEETR-------QIILKSGVSEKQVNSVVADVTTEDGQ   73 (280)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHcCCCCcceEEEEecCCCHHHH
Confidence            46889999    99999999999999999999999999864432211       11111     135566666   5556


Q ss_pred             HhhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHH----HhCCCcEEEEecccccc
Q 018900          145 GNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIY  191 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy  191 (349)
                      +++++..     ++|+|||+||.                        |+.++.++++++    ++.+ .+||++||...+
T Consensus        74 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  152 (280)
T 1xkq_A           74 DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG  152 (280)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc
Confidence            6655432     47999999983                        233444555544    3345 799999998765


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-h-------HHHHHHHHhCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-E-------EWFFDRIVRKRPV  256 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~-------~~~~~~~~~~~~~  256 (349)
                      ....  +    ....|..+|.+++.+.+.       .|+++.+++||++.++...... .       ..+...+....  
T Consensus       153 ~~~~--~----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--  224 (280)
T 1xkq_A          153 PQAQ--P----DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI--  224 (280)
T ss_dssp             SSCC--C----SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC--
T ss_pred             CCCC--C----cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCC--
Confidence            4320  0    011223456655554432       4899999999999887421100 0       00111111111  


Q ss_pred             ccCCCCCcceeeeeHHHHHHHHHHHhcCC-C-ccCCCEEEeeCCCc
Q 018900          257 PIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLVSDRA  300 (349)
Q Consensus       257 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~-~~~~~~~~i~~~~~  300 (349)
                             ....+.+.+|+|++++.++.++ . ...|+++++.+|..
T Consensus       225 -------p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          225 -------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             -------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             -------CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence                   1124689999999999998764 2 24568999998854

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.56  E-value=9.7e-15  Score=130.71  Aligned_cols=204  Identities=13%  Similarity=0.139  Sum_probs=124.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|.. +...+.       ..++.  ...+.++.+|   .+++++
T Consensus         7 ~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (259)
T 3edm_A            7 TNRTIVVA----GAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATA-------VAEIEKLGRSALAIKADLTNAAEVEA   75 (259)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHH-------HHHHHTTTSCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH-------HHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            56899999    9999999999999999999999985543 222110       01111  1245566666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHHHhCCC--cEEEEecccccc-CCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGV--KQFLFISSAGIY-KPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~gv--~~~i~~Ss~~vy-~~~~~~  197 (349)
                      +++..     ++|++||+||.                     |+.++.++++++...-.  .++|++||...+ ..... 
T Consensus        76 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-  154 (259)
T 3edm_A           76 AISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG-  154 (259)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT-
T ss_pred             HHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC-
Confidence            66532     48999999972                     45667788887766532  489999997765 22111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----hh--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----EN--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                            ...|..+|.+++.+.+    |.  .+++..++||.+..+.............+         ........+.+.
T Consensus       155 ------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~p  219 (259)
T 3edm_A          155 ------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSS  219 (259)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------CCBCH
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCH
Confidence                  1112335555554443    22  38899999999877643221001111111         111122346789


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCH
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTL  303 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~  303 (349)
                      +|+|++++.++.+... ..|+++++.+|.....
T Consensus       220 edva~~v~~L~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          220 EDVAGLVAFLASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred             HHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence            9999999999987643 4579999999875443

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.56  E-value=5.3e-15  Score=136.53  Aligned_cols=196  Identities=13%  Similarity=0.060  Sum_probs=113.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee----cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~~~l~  145 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..++..       .++.    ...+.++.+|   .++++
T Consensus         7 ~~k~vlVT----Gas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dl~~~~~v~   75 (319)
T 3ioy_A            7 AGRTAFVT----GGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKAL-------ATLEAEGSGPEVMGVQLDVASREGFK   75 (319)
T ss_dssp             TTCEEEEE----TTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHTCGGGEEEEECCTTCHHHHH
T ss_pred             CCCEEEEc----CCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCCeEEEEECCCCCHHHHH
Confidence            46799999    99999999999999999999999999875443211       1111    1145566666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC----------CCcEEEEeccccc
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----------GVKQFLFISSAGI  190 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~----------gv~~~i~~Ss~~v  190 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++++...          +..+||++||...
T Consensus        76 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~  155 (319)
T 3ioy_A           76 MAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA  155 (319)
T ss_dssp             HHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGG
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccc
Confidence            665532     48999999993                    455666666654332          3468999999776


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHH----H---hhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCC-
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYI----S---ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGS-  261 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~----~---~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-  261 (349)
                      +.....       ...|..+|.+++.+.    .   ..|+++++++||.|.++..... .....+.............. 
T Consensus       156 ~~~~~~-------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (319)
T 3ioy_A          156 FLAAGS-------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL  228 (319)
T ss_dssp             TCCCSS-------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred             ccCCCC-------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHH
Confidence            543211       111223455333322    2   2389999999999987654321 00001110000000000000 


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCC
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPE  286 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~  286 (349)
                      .......++.+|+|+.++.+++.+.
T Consensus       229 ~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          229 AGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            0011122799999999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.55  E-value=7.3e-15  Score=130.57  Aligned_cols=199  Identities=15%  Similarity=0.202  Sum_probs=126.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++ ...+..+.+|   .+++++++
T Consensus         4 l~gk~vlVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~   71 (247)
T 3rwb_A            4 LAGKTALVT----GAAQGIGKAIAARLAADGATVIVSDINAEGAKAAA-------ASI-GKKARAIAADISDPGSVKALF   71 (247)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHH-CTTEEECCCCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHH
Confidence            357899999    99999999999999999999999999875443211       111 2234445555   66666666


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCC-CcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~g-v~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|++||+||.                    |+.++.++.++    +++.+ ..++|++||...+.....  
T Consensus        72 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  149 (247)
T 3rwb_A           72 AEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN--  149 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT--
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC--
Confidence            532     47999999993                    34455555554    66655 679999999765433211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC-CCcccCCCCCcceeeee
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~  270 (349)
                           ...|..+|.+.+.+.+    |   .|+++..++||.+..+...... .......... .+         ...+.+
T Consensus       150 -----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~---------~~r~~~  214 (247)
T 3rwb_A          150 -----MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASP-HNEAFGFVEMLQA---------MKGKGQ  214 (247)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG-GGGGHHHHHHHSS---------SCSCBC
T ss_pred             -----chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC-hhHHHHHHhcccc---------cCCCcC
Confidence                 1112234544443332    2   4899999999998765321100 0000011110 11         123467


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.++.. ..|+++++.+|.
T Consensus       215 pedva~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          215 PEHIADVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            89999999999987643 467999999874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.55  E-value=3.4e-14  Score=128.56  Aligned_cols=202  Identities=14%  Similarity=0.154  Sum_probs=129.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|.||++++++|+++|++|++++|+.+...++.       .++ ...+.++.+|   .+++++++
T Consensus        28 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~v~~~~   95 (281)
T 3ppi_A           28 FEGASAIVS----GGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA-------DEL-GNRAEFVSTNVTSEDSVLAAI   95 (281)
T ss_dssp             GTTEEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHh-CCceEEEEcCCCCHHHHHHHH
Confidence            357899999    99999999999999999999999999875443211       111 2346667776   55555554


Q ss_pred             cC---C-CccEEEeC-CCC-------------------------ChhhHHHHHHHHH----h------CCCcEEEEeccc
Q 018900          149 GG---V-TFDVVLDN-NGK-------------------------NLDAVRPVADWAK----S------SGVKQFLFISSA  188 (349)
Q Consensus       149 ~~---~-~~d~Vi~~-a~~-------------------------~~~~~~~ll~~a~----~------~gv~~~i~~Ss~  188 (349)
                      +.   . ++|++||+ ++.                         |+.++.++++++.    +      .+..+||++||.
T Consensus        96 ~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           96 EAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             HHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            42   2 48999999 442                         2344555555443    2      244699999997


Q ss_pred             cccCCCCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCC
Q 018900          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS  261 (349)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (349)
                      ..+.....       ...|..+|.+++.+.+    +   .|+++..++||.+..+.... ........+....+..    
T Consensus       176 ~~~~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~----  243 (281)
T 3ppi_A          176 AGYEGQIG-------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPFP----  243 (281)
T ss_dssp             GGTSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCSS----
T ss_pred             cccCCCCC-------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCCC----
Confidence            76543211       1112234555444332    2   38999999999987643211 1122333333333321    


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccC
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  302 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t  302 (349)
                          ..+++.+|+|++++.++.+. ..+|+++++.+|..++
T Consensus       244 ----~~~~~pedvA~~v~~l~s~~-~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          244 ----KRLGTPDEFADAAAFLLTNG-YINGEVMRLDGAQRFT  279 (281)
T ss_dssp             ----SSCBCHHHHHHHHHHHHHCS-SCCSCEEEESTTCCCC
T ss_pred             ----CCCCCHHHHHHHHHHHHcCC-CcCCcEEEECCCcccC
Confidence                23678999999999999874 3456999999987654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.55  E-value=1.8e-14  Score=128.37  Aligned_cols=186  Identities=11%  Similarity=0.044  Sum_probs=109.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ..++.++.+|   .++++++
T Consensus         6 ~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (252)
T 3h7a_A            6 RNATVAVI----GAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLV-------AEIEAAGGRIVARSLDARNEDEVTAF   74 (252)
T ss_dssp             CSCEEEEE----CCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-------HHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCeEEEEECcCCCHHHHHHH
Confidence            46899999    99999999999999999999999999876543321       1111  1245566666   5666666


Q ss_pred             hcCC----CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..    ++|++||+||.                    |+.++.++++    .+++.+..+||++||...+.....   
T Consensus        75 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  151 (252)
T 3h7a_A           75 LNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG---  151 (252)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT---
T ss_pred             HHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC---
Confidence            6533    58999999993                    3344444444    456666779999999765432111   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcE-EEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~-~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ...|..+|.+++.+.+.       .|+++ .+++||.+..+.....     .....     .......... +++.
T Consensus       152 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~-----~~~~~-----~~~~~~~~~~-~~~p  216 (252)
T 3h7a_A          152 ----FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER-----REQMF-----GKDALANPDL-LMPP  216 (252)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCH
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc-----chhhh-----hhhhhcCCcc-CCCH
Confidence                11122345554443332       37888 8999999876543221     11110     0011111122 7899


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +|+|++++.++.++..
T Consensus       217 edvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          217 AAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             HHHHHHHHHHHHCCGG
T ss_pred             HHHHHHHHHHHhCchh
Confidence            9999999999997655

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.55  E-value=9.1e-15  Score=131.13  Aligned_cols=207  Identities=14%  Similarity=0.092  Sum_probs=126.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|.||++++++|+++|++|++++|.....+.+..    ...++.  ...+.++.+|   .++++++
T Consensus        10 ~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A           10 KNKVIVIA----GGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANK----LKDELEDQGAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHH----HHHHHHTTTCEEEEEECCCCSHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHH----HHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46899999    999999999999999999999999875422111000    001111  1234555666   6666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ++..     ++|++||+||.                    |+.++.++++++...  +..++|++||...+.....    
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~----  157 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF----  157 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC----
Confidence            6532     48999999993                    456677788877654  3468999999765543211    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+.       .|+++..++||.+..+..         ....................+.+.+|
T Consensus       158 ---~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~---------~~~~~~~~~~~~~~~~~~~r~~~ped  225 (262)
T 3ksu_A          158 ---YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFF---------YGQETKESTAFHKSQAMGNQLTKIED  225 (262)
T ss_dssp             ---CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHH---------HTCC------------CCCCSCCGGG
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccc---------cccCchHHHHHHHhcCcccCCCCHHH
Confidence               12345577776665543       389999999998865321         10000000011111111234678899


Q ss_pred             HHHHHHHHhcCCCccCCCEEEeeCCCccCH
Q 018900          274 LSSMLTLAVENPEAASSNIFNLVSDRAVTL  303 (349)
Q Consensus       274 va~~~~~~~~~~~~~~~~~~~i~~~~~~t~  303 (349)
                      +|++++.++.+....+|+++++.+|.....
T Consensus       226 vA~~v~~L~s~~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          226 IAPIIKFLTTDGWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             THHHHHHHHTTTTTCCSCEEEESTTCCCC-
T ss_pred             HHHHHHHHcCCCCCccCCEEEECCCccCCC
Confidence            999999999873335679999998864443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.55  E-value=5.9e-14  Score=124.78  Aligned_cols=194  Identities=16%  Similarity=0.161  Sum_probs=120.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++ ...+.++.+|   .++++++++..
T Consensus         1 k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   68 (248)
T 3asu_A            1 MIVLVT----GATAGFGECITRRFIQQGHKVIATGRRQERLQELK-------DEL-GDNLYIAQLDVRNRAAIEEMLASL   68 (248)
T ss_dssp             CEEEET----TTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHHTS
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHh-cCceEEEEcCCCCHHHHHHHHHHH
Confidence            579999    99999999999999999999999999864432211       111 1245566666   66777776543


Q ss_pred             -----CccEEEeCCCC---------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          152 -----TFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       152 -----~~d~Vi~~a~~---------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                           ++|+|||+||.                     |+.++.++++    .+++.+..+||++||...+.....     
T Consensus        69 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----  143 (248)
T 3asu_A           69 PAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-----  143 (248)
T ss_dssp             CTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-----
T ss_pred             HHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCC-----
Confidence                 48999999983                     2333444444    444556789999999775532111     


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceee-CCCCCCchHHHHHHHHhCCCc-ccCCCCCcceeeeeHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIG-SGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVR  272 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~  272 (349)
                        ...|..+|.+++.+.+.       .|+++..++||.+.| +.....     ...  ..... ...    ....+++.+
T Consensus       144 --~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~-----~~~--~~~~~~~~~----~~~~~~~p~  210 (248)
T 3asu_A          144 --GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR-----FKG--DDGKAEKTY----QNTVALTPE  210 (248)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCHH
T ss_pred             --CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc-----ccC--chHHHHHHH----hccCCCCHH
Confidence              11223456665554432       389999999999984 432110     000  00000 000    012246899


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      |+|++++.++.++....++.+.+...
T Consensus       211 dvA~~v~~l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          211 DVSEAVWWVSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred             HHHHHHHHHhcCCccceeeEEEEccc
Confidence            99999999999876656677776654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.54  E-value=1.3e-13  Score=124.43  Aligned_cols=199  Identities=12%  Similarity=0.084  Sum_probs=128.2

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+.+ ..+       ...++..  .++.++.+|   ++++.
T Consensus         5 ~~k~vlVT----Gas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~-------~~~~l~~~~~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            5 KGKKGLIV----GVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEK-------RVRPIAQELNSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THH-------HHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHH-------HHHHHHHhcCCcEEEEcCCCCHHHHH
Confidence            46899999    999  99999999999999999999999864 111       1111111  125566666   55666


Q ss_pred             hhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~  194 (349)
                      ++++..     ++|+|||+||.                        |+.++.++++++...  +..+||++||...+...
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC
Confidence            655432     48999999983                        234566777777654  12599999997654321


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ...|..+|.+.+.+.+.       .|+++..++||.+..+..... ....+...+....++         .
T Consensus       153 ~~-------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  216 (275)
T 2pd4_A          153 AH-------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------R  216 (275)
T ss_dssp             TT-------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------S
T ss_pred             CC-------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------C
Confidence            10       11123456555544432       389999999999988753221 112223333332222         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+.+.+|+|++++.++.++.. ..|+++++.++.
T Consensus       217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            246789999999999976433 356899998875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.54  E-value=3.4e-15  Score=134.88  Aligned_cols=200  Identities=15%  Similarity=0.184  Sum_probs=127.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|.||++++++|+++|++|++++|+.+...+..       .++.  ...+..+.+|   .+++.+
T Consensus        31 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (275)
T 4imr_A           31 LRGRTALVT----GSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQ-------QRIIASGGTAQELAGDLSEAGAGTD   99 (275)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHH-------HHHHHTTCCEEEEECCTTSTTHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-------HHHHhcCCeEEEEEecCCCHHHHHH
Confidence            356899999    99999999999999999999999999876543221       1111  2245566666   455555


Q ss_pred             hhcCC----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          147 VVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       147 ~~~~~----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +++..    ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+.....  
T Consensus       100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--  177 (275)
T 4imr_A          100 LIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSV--  177 (275)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC--
Confidence            54422    48999999993                    344555555544    5566789999999776542110  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc--hHHHHHHHHhCC-CcccCCCCCcceee
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKR-PVPIPGSGMQFTNI  268 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~  268 (349)
                           ...|..+|.+++.+.+.       .++++..++||.+..+......  .......+.... ++         ..+
T Consensus       178 -----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r~  243 (275)
T 4imr_A          178 -----VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GRA  243 (275)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CSC
T ss_pred             -----chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CCC
Confidence                 11123455555444332       3899999999998765311100  001111111111 11         124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      ...+|+|++++.++.+... .+|+++++.+|
T Consensus       244 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          244 GRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            5789999999999987643 46799999876

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.54  E-value=1.7e-13  Score=124.97  Aligned_cols=202  Identities=13%  Similarity=0.094  Sum_probs=132.2

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      ++|+||||    ||+|  +||++++++|+++|++|++++|+.+..+.+        .++.  ...+.++.+|   .++++
T Consensus        29 ~~k~vlVT----Gasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~--------~~~~~~~~~~~~~~~Dv~d~~~v~   96 (296)
T 3k31_A           29 EGKKGVII----GVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV--------DPLAESLGVKLTVPCDVSDAESVD   96 (296)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH--------HHHHHHHTCCEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----eCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHH--------HHHHHhcCCeEEEEcCCCCHHHHH
Confidence            46899999    9998  999999999999999999999985322211        1110  1134556666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPA  194 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~  194 (349)
                      ++++..     ++|++||+||.                        |+.++.++++++...-  ..+||++||...+...
T Consensus        97 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~  176 (296)
T 3k31_A           97 NMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV  176 (296)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC
Confidence            666543     48999999983                        3455667777765532  3599999997765332


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ...|..+|.+++.+.+.       .|+++..++||++..+...... ...+........++         .
T Consensus       177 ~~-------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  240 (296)
T 3k31_A          177 PH-------YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------R  240 (296)
T ss_dssp             TT-------TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------S
T ss_pred             CC-------chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------C
Confidence            11       11123456555544332       3899999999999987654321 12223333333332         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .+...+|+|++++.++.+... .+|+++++.+|..+.
T Consensus       241 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCcccc
Confidence            245789999999999987543 457999999986443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.54  E-value=4.2e-14  Score=127.53  Aligned_cols=196  Identities=13%  Similarity=0.118  Sum_probs=121.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.. .++.++.+|   .++++++++.
T Consensus        22 k~vlVT----Gas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   90 (272)
T 2nwq_A           22 STLFIT----GATSGFGEACARRFAEAGWSLVLTGRREERLQALA-------GELSAKTRVLPLTLDVRDRAAMSAAVDN   90 (272)
T ss_dssp             CEEEES----STTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHTTTSCEEEEECCTTCHHHHHHHHHT
T ss_pred             cEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHhhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            789999    99999999999999999999999999864433211       01110 245566666   6677777765


Q ss_pred             C-----CccEEEeCCCCC---------------------hhh----HHHHHHHHHhCCCc-EEEEeccccccCCCCCCCC
Q 018900          151 V-----TFDVVLDNNGKN---------------------LDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       151 ~-----~~d~Vi~~a~~~---------------------~~~----~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .     ++|+|||+||..                     +.+    ++.++..+++.+.. +||++||...+.....   
T Consensus        91 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~---  167 (272)
T 2nwq_A           91 LPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG---  167 (272)
T ss_dssp             CCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT---
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC---
Confidence            4     479999999842                     223    34455556666667 9999999776532111   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+.       .|+++.+++||.+..+.....     .... .........    ...++..+
T Consensus       168 ----~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-----~~~~-~~~~~~~~~----~~~~~~pe  233 (272)
T 2nwq_A          168 ----SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR-----FGGD-QARYDKTYA----GAHPIQPE  233 (272)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc-----cccc-hHHHHHhhc----cCCCCCHH
Confidence                11223456666555433       379999999999987643210     0000 000000000    01247899


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      |+|++++.++.++....++.+.+..+
T Consensus       234 dvA~~v~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          234 DIAETIFWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHHHHHhCCCccCccceEEEeec
Confidence            99999999998765544566766654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.54  E-value=8e-15  Score=131.66  Aligned_cols=186  Identities=11%  Similarity=0.075  Sum_probs=121.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|+||++++++|++ +|++|++++|+.+...+..       .++.  ...+.++.+|   .+++.+
T Consensus         3 ~~k~vlIT----GasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~~~~   71 (276)
T 1wma_A            3 GIHVALVT----GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-------QQLQAEGLSPRFHQLDIDDLQSIRA   71 (276)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-------HHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH-------HHHHhcCCeeEEEECCCCCHHHHHH
Confidence            46899999    9999999999999999 9999999999864332110       1111  1245666776   556666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCC-CC---
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKP-AD---  195 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~-~~---  195 (349)
                      +++..     ++|+|||+||.                    |+.++.++++++....  ..+||++||...+.. ..   
T Consensus        72 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  151 (276)
T 1wma_A           72 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP  151 (276)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCH
T ss_pred             HHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCCh
Confidence            66532     58999999983                    3456778888887653  249999999766521 00   


Q ss_pred             -------CCCCCCCC----------------------C-CCCCCChHHHHHHHH----h-------hCCcEEEEecCcee
Q 018900          196 -------EPPHVEGD----------------------V-VKPDAGHVQVEKYIS----E-------NFSNWASFRPQYMI  234 (349)
Q Consensus       196 -------~~~~~e~~----------------------~-~~~~~~k~~~ek~~~----~-------~~~~~~ilR~~~v~  234 (349)
                             ..++.|++                      + ..|..+|.+++.+.+    +       .++++.+++||++.
T Consensus       152 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~  231 (276)
T 1wma_A          152 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  231 (276)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             hHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccc
Confidence                   01111111                      0 112234555444432    2       47999999999987


Q ss_pred             eCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCC---ccCCCEEE
Q 018900          235 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE---AASSNIFN  294 (349)
Q Consensus       235 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~~~~  294 (349)
                      .+....                         ..+++.+|+|+.++.++..+.   ..+|+.|.
T Consensus       232 t~~~~~-------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          232 TDMAGP-------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             STTTCT-------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cCcCCc-------------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            654221                         125789999999999998652   33556665

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.54  E-value=2.4e-14  Score=127.54  Aligned_cols=200  Identities=15%  Similarity=0.119  Sum_probs=124.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~  146 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+...    .+.......+.++.+|     .+++++
T Consensus        10 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~   81 (252)
T 3f1l_A           10 LNDRIILVT----GASDGIGREAAMTYARYGATVILLGRNEEKLRQVAS----HINEETGRQPQWFILDLLTCTSENCQQ   81 (252)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSCCCEEEECCTTTCCHHHHHH
T ss_pred             cCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhhcCCCceEEEEecccCCHHHHHH
Confidence            357899999    999999999999999999999999998654432110    0001111134455554     455555


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|++||+||.                     |+.++.++++++    ++.+..+||++||...+.....
T Consensus        82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (252)
T 3f1l_A           82 LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN  161 (252)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC
Confidence            55432     48999999983                     234455555544    6677789999999765432111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH----hh--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS----EN--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~----~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                             ...|..+|.+++.+.+    |+  .+++..+.||.+..+         +........+         ...+.+
T Consensus       162 -------~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~~---------~~~~~~  216 (252)
T 3f1l_A          162 -------WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------MRASAFPTED---------PQKLKT  216 (252)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------HHHHHCTTCC---------GGGSBC
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------hhhhhCCccc---------hhccCC
Confidence                   1112345555554433    22  378889999887543         2222221111         123568


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHH
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~  304 (349)
                      .+|+|++++.++.++.. ..|+++++.+|...++.
T Consensus       217 p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          217 PADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             TGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            89999999999987643 45799999999766554

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.54  E-value=3.2e-14  Score=128.04  Aligned_cols=202  Identities=15%  Similarity=0.137  Sum_probs=126.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++|++|||    ||+|+||++++++|+++|++|++++|.... .+++.       .++.  ...+.++.+|   .+++.
T Consensus        16 l~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~   84 (270)
T 3is3_A           16 LDGKVALVT----GSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV-------SEIKALGSDAIAIKADIRQVPEIV   84 (270)
T ss_dssp             CTTCEEEES----CTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHH
Confidence            357899999    999999999999999999999998876422 11110       1111  1245566666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++++..     ++|++||+||.                    |+.++.++++++...-  -.++|++||........  +
T Consensus        85 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~  162 (270)
T 3is3_A           85 KLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSV--P  162 (270)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCC--T
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCC--C
Confidence            666533     48999999993                    4566777777665542  24999999965211100  0


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-----------CchHHHHHHHHhCCCcccCC
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~  260 (349)
                          ....|..+|.+++.+.+.       .|+++..++||.+..+....           .........+....++    
T Consensus       163 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----  234 (270)
T 3is3_A          163 ----KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL----  234 (270)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT----
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC----
Confidence                011122355555444332       38999999999998764210           0011111222222221    


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                           ..+.+.+|+|++++.++.+... .+|+++++.+|.
T Consensus       235 -----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          235 -----HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             -----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence                 2356799999999999976543 457999998874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.54  E-value=1.9e-14  Score=128.34  Aligned_cols=199  Identities=12%  Similarity=0.073  Sum_probs=125.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      |+|+||||    ||+|+||++++++|+++|  +.|++++|+.+..+++.        +.....+.++.+|   .++++++
T Consensus         1 Mgk~~lVT----Gas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~   68 (254)
T 3kzv_A            1 MGKVILVT----GVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK--------EKYGDRFFYVVGDITEDSVLKQL   68 (254)
T ss_dssp             -CCEEEEC----STTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHH--------HHHGGGEEEEESCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHH--------HHhCCceEEEECCCCCHHHHHHH
Confidence            46899999    999999999999999985  78988999865443211        1112345666666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||+||.                     |+.++.++++++    ++.+ .++|++||...+..... 
T Consensus        69 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~-  146 (254)
T 3kzv_A           69 VNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSS-  146 (254)
T ss_dssp             HHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCC-
T ss_pred             HHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCC-
Confidence            5533     58999999984                     344555565555    5555 79999999765432111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHh-----hCCcEEEEecCceeeCCCCCC--------chHHHHHHHHhCCCcccCCCCCc
Q 018900          198 PHVEGDVVKPDAGHVQVEKYISE-----NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~~-----~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                            ...|..+|.+++.+.+.     .++++..++||.+..+.....        ........+....+.        
T Consensus       147 ------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  212 (254)
T 3kzv_A          147 ------WGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN--------  212 (254)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT--------
T ss_pred             ------cchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc--------
Confidence                  11223355555544432     289999999999988754321        012222222222211        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCC--CccCCCEEEeeCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSDRA  300 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~--~~~~~~~~~i~~~~~  300 (349)
                       ..+.+.+|+|++++.++.++  ...+|+.+++.+++-
T Consensus       213 -~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          213 -NQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             -C----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             -CCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence             23578899999999999876  335679999988763

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.53  E-value=7.9e-14  Score=126.15  Aligned_cols=200  Identities=12%  Similarity=0.124  Sum_probs=129.1

Q ss_pred             ccceEEEEEecCCCcccc--hHHHHHHHHHhCCCeEEEEEcCC--CCcccCCCCCCCcccceecCCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~--iG~~l~~~Ll~~g~~V~~l~R~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l  144 (349)
                      .++|+||||    ||+|+  ||++++++|+++|++|++++|+.  +..+++.        . ...++.++.+|   .+++
T Consensus        24 l~~k~vlVT----Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~--------~-~~~~~~~~~~Dl~~~~~v   90 (280)
T 3nrc_A           24 LAGKKILIT----GLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLC--------A-EFNPAAVLPCDVISDQEI   90 (280)
T ss_dssp             TTTCEEEEC----CCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHH--------G-GGCCSEEEECCTTCHHHH
T ss_pred             cCCCEEEEE----CCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHH--------H-hcCCceEEEeecCCHHHH
Confidence            346899999    99977  99999999999999999999986  1111110        0 01235667777   5566


Q ss_pred             HhhhcCC-----CccEEEeCCCCC-------------------------hhhHHHHHHHHHhC---CCcEEEEecccccc
Q 018900          145 GNVVGGV-----TFDVVLDNNGKN-------------------------LDAVRPVADWAKSS---GVKQFLFISSAGIY  191 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy  191 (349)
                      +++++..     ++|+|||+||..                         +.++.++++++...   +..+||++||...+
T Consensus        91 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~  170 (280)
T 3nrc_A           91 KDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE  170 (280)
T ss_dssp             HHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            6655433     489999999842                         23455556555332   24699999997765


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCC
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      .....       ...|..+|.+++.+.+       ..++++..++||.+..+..... ....+........++       
T Consensus       171 ~~~~~-------~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-------  236 (280)
T 3nrc_A          171 KAMPS-------YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL-------  236 (280)
T ss_dssp             SCCTT-------THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT-------
T ss_pred             cCCCC-------chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC-------
Confidence            43211       1112235555544433       2489999999999988654321 112333333333322       


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                        ..+.+.+|+|++++.++.++.. .+|+++++.+|..
T Consensus       237 --~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          237 --KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             --CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence              2256789999999999986543 5679999998864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.53  E-value=2.4e-14  Score=129.92  Aligned_cols=199  Identities=14%  Similarity=0.159  Sum_probs=125.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++++||||    ||+|.||++++++|+++|++|++++|+.+..+++.........++.  ...+.++.+|   .++++++
T Consensus         8 ~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            8 RGKTMFIS----GGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46899999    9999999999999999999999999998655443211111111121  2245566666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh----CCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~----~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|++||+||.                    |+.++.++++++..    .+..+||++||...+.....  
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--  161 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL--  161 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC--
Confidence            5533     58999999993                    45566667776543    35679999999654332100  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          ....|..+|.+++.+.+       ..|+++..++||++...        .+......... +       ...+...
T Consensus       162 ----~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t--------~~~~~~~~~~~-~-------~~r~~~p  221 (285)
T 3sc4_A          162 ----RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT--------AAVQNLLGGDE-A-------MARSRKP  221 (285)
T ss_dssp             ----CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC--------HHHHHHHTSCC-C-------CTTCBCT
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc--------HHHHhhccccc-c-------ccCCCCH
Confidence                00122345555544433       24899999999854321        12333332221 1       1235688


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                      +|+|++++.++.++....|+.+.+.+
T Consensus       222 edvA~~~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          222 EVYADAAYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHHHHhCCcccccceEEEEcC
Confidence            99999999999887644556666554

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.53  E-value=8.9e-14  Score=128.77  Aligned_cols=200  Identities=12%  Similarity=0.083  Sum_probs=128.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEE-cCCCCcccCCCCCCCccccee---cCCCeEEEcC---hh---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---PA---  142 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~---  142 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++ |+.+...++.       .++.   ...+.++.+|   .+   
T Consensus        45 ~~k~~lVT----Gas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dl~d~~~~~  113 (328)
T 2qhx_A           45 TVPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-------ATLNARRPNSAITVQADLSNVATAP  113 (328)
T ss_dssp             CCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHSTTCEEEEECCCSSSCBCC
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhhcCCeEEEEEeeCCCchhcc
Confidence            45789999    9999999999999999999999999 8764332211       1111   1234555565   45   


Q ss_pred             --------------hHHhhhcCC-----CccEEEeCCCCC----------------------------------hhhHHH
Q 018900          143 --------------EVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVRP  169 (349)
Q Consensus       143 --------------~l~~~~~~~-----~~d~Vi~~a~~~----------------------------------~~~~~~  169 (349)
                                    +++++++..     ++|+|||+||..                                  +.++.+
T Consensus       114 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~  193 (328)
T 2qhx_A          114 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  193 (328)
T ss_dssp             -------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHH
T ss_pred             ccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHH
Confidence                          666666532     479999999841                                  122333


Q ss_pred             HHH----HHHhCC------CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCc
Q 018900          170 VAD----WAKSSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQY  232 (349)
Q Consensus       170 ll~----~a~~~g------v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~  232 (349)
                      +++    .+++.+      ..+||++||...+....+       ...|..+|.+++.+.+.       .|+++..++||+
T Consensus       194 l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~-------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~  266 (328)
T 2qhx_A          194 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG-------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL  266 (328)
T ss_dssp             HHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             HHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCCC-------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence            334    444555      679999999775542111       11223456555544432       389999999999


Q ss_pred             eeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       233 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +..+. .. . ......+....++.        ..+.+.+|+|++++.++.++.. ..|+++++.+|..+
T Consensus       267 v~T~~-~~-~-~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          267 SVLVD-DM-P-PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             BSCCC-CS-C-HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCc-cc-c-HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            98876 22 2 33333333332211        0256899999999999976433 45689999988543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.53  E-value=4.3e-14  Score=127.39  Aligned_cols=199  Identities=14%  Similarity=0.139  Sum_probs=127.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|.... .+++       ..++.  ...+..+.+|   .++++
T Consensus        29 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~Dv~d~~~v~   97 (271)
T 3v2g_A           29 LAGKTAFVT----GGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV-------VSEIEQAGGRAVAIRADNRDAEAIE   97 (271)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-------HHHHHhcCCcEEEEECCCCCHHHHH
Confidence            356899999    999999999999999999999999776522 1111       01111  1234556666   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccc-cCCCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGI-YKPADEP  197 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~v-y~~~~~~  197 (349)
                      ++++..     ++|++||+||.                    |+.++.++++++...  +..+||++||... ++...  
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~--  175 (271)
T 3v2g_A           98 QAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP--  175 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST--
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC--
Confidence            665532     47999999983                    456677777766543  3469999998543 22111  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           ....|..+|.+++.+.+    |   .|+++..++||.+..+......  ..........+.         ..+.+
T Consensus       176 -----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~---------~r~~~  239 (271)
T 3v2g_A          176 -----GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIAT---------GSYGE  239 (271)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCTT---------SSCBC
T ss_pred             -----CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCCC---------CCCCC
Confidence                 01112335555544433    2   3899999999999887643210  112223333222         22567


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.+... ..|+++++.+|.
T Consensus       240 pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          240 PQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            89999999999876543 457999998874

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.53  E-value=5.3e-14  Score=126.84  Aligned_cols=195  Identities=16%  Similarity=0.150  Sum_probs=115.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++ ..++.++.+|   .+++++++
T Consensus        26 ~~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dv~d~~~v~~~~   93 (272)
T 4dyv_A           26 TGKKIAIVT----GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA-------AEI-GDDALCVPTDVTDPDSVRALF   93 (272)
T ss_dssp             --CCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-TSCCEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCCeEEEEecCCCHHHHHHHH
Confidence            356889999    99999999999999999999999999865443211       111 1355666666   56666666


Q ss_pred             cCC-----CccEEEeCCCC---------------------ChhhH----HHHHHHHHhCC--CcEEEEeccccccCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK---------------------NLDAV----RPVADWAKSSG--VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~---------------------~~~~~----~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~  196 (349)
                      +..     ++|+|||+||.                     |+.++    +.++..+++.+  ..+||++||...+.....
T Consensus        94 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  173 (272)
T 4dyv_A           94 TATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY  173 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC
Confidence            533     47999999994                     23343    34444555554  469999999765432211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...|..+|.+++.+.+.       .++++..++||.+..+....         +..+.+...  .......++
T Consensus       174 -------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---------~~~~~~~~~--~~~~~~~~~  235 (272)
T 4dyv_A          174 -------SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK---------MKAGVPQAD--LSIKVEPVM  235 (272)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh---------hcccchhhh--hcccccCCC
Confidence                   11123456555544332       38999999999987764321         111111000  011123478


Q ss_pred             eHHHHHHHHHHHhcCCCccCCCEEEee
Q 018900          270 HVRDLSSMLTLAVENPEAASSNIFNLV  296 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~~~~~~~i~  296 (349)
                      +++|+|++++.++.++.......+.+.
T Consensus       236 ~pedvA~~v~fL~s~~~~~~~~~i~i~  262 (272)
T 4dyv_A          236 DVAHVASAVVYMASLPLDANVQFMTIM  262 (272)
T ss_dssp             CHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred             CHHHHHHHHHHHhCCCCcCccceEEEe
Confidence            999999999999998766432333333

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.53  E-value=4e-15  Score=134.16  Aligned_cols=178  Identities=12%  Similarity=0.087  Sum_probs=117.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ..++.++.+|   .+++.+
T Consensus        29 l~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dl~~~~~v~~   97 (272)
T 1yb1_A           29 VTGEIVLIT----GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-------AKCKGLGAKVHTFVVDCSNREDIYS   97 (272)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH-------HHHHhcCCeEEEEEeeCCCHHHHHH
Confidence            356899999    99999999999999999999999999764332210       1111  1245666676   555666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.+    ++.++..+++.+.++||++||...+..... 
T Consensus        98 ~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  176 (272)
T 1yb1_A           98 SAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF-  176 (272)
T ss_dssp             HHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH-
T ss_pred             HHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC-
Confidence            55422     47999999983                    2334    344555556677889999999876543110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCccee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                            ...+..+|.+++.+.+    +      .+++++++|||++.++.....              .      .....
T Consensus       177 ------~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~------~~~~~  230 (272)
T 1yb1_A          177 ------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------S------TSLGP  230 (272)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------H------HHHCC
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------------c------ccccC
Confidence                  0112235665554443    2      278999999999887653210              0      01124


Q ss_pred             eeeHHHHHHHHHHHhcCCCc
Q 018900          268 IAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~  287 (349)
                      +++.+|+|++++.++.++..
T Consensus       231 ~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          231 TLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             CCCHHHHHHHHHHHHHTTCS
T ss_pred             CCCHHHHHHHHHHHHHcCCC
Confidence            68899999999999987643

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.52  E-value=5e-14  Score=124.85  Aligned_cols=185  Identities=12%  Similarity=0.154  Sum_probs=107.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhH------Hh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV------GN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l------~~  146 (349)
                      ++|+||||    ||+|+||++++++|++ |+.|++++|+.+...++..          ..++..+.+|..+.      .+
T Consensus         4 ~~k~vlIT----Gas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   68 (245)
T 3e9n_A            4 KKKIAVVT----GATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVD   68 (245)
T ss_dssp             --CEEEEE----STTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCG
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHH
Confidence            46789999    9999999999999987 9999999998754432211          12466777784332      22


Q ss_pred             hhcCC-CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          147 VVGGV-TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       147 ~~~~~-~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      .++.. ++|+|||+||.                    |+.++.++++    .+++.+ .++|++||...+.....     
T Consensus        69 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-----  142 (245)
T 3e9n_A           69 KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPG-----  142 (245)
T ss_dssp             GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCC-----
Confidence            33333 48999999993                    3444334444    444445 69999999776553211     


Q ss_pred             CCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                        ...|..+|.+++.+.+.       .|+++..++||.+.++....         .....     +.......+++.+|+
T Consensus       143 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~~~-----~~~~~~~~~~~p~dv  206 (245)
T 3e9n_A          143 --NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG---------LMDSQ-----GTNFRPEIYIEPKEI  206 (245)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHH
T ss_pred             --chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh---------hhhhh-----hcccccccCCCHHHH
Confidence              11123456665554432       38999999999998864322         11100     001111347899999


Q ss_pred             HHHHHHHhcCCCccCCCEEEee
Q 018900          275 SSMLTLAVENPEAASSNIFNLV  296 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~  296 (349)
                      |++++.+++.+..  +.++|+.
T Consensus       207 A~~i~~l~~~~~~--~~~~~i~  226 (245)
T 3e9n_A          207 ANAIRFVIDAGET--TQITNVD  226 (245)
T ss_dssp             HHHHHHHHTSCTT--EEEEEEE
T ss_pred             HHHHHHHHcCCCc--cceeeeE
Confidence            9999999988765  3577765

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.52  E-value=4.9e-14  Score=129.90  Aligned_cols=215  Identities=13%  Similarity=0.085  Sum_probs=128.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccC-CCCCCCccc----cee--cCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFN----EIV--SAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~-~~~~~~~~~----~l~--~~~~~~~~~D---~  141 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|........ .........    ++.  ...+.++.+|   +
T Consensus        44 l~gk~~lVT----Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           44 LQGKVAFIT----GAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             TTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            456899999    9999999999999999999999999874321100 000000011    111  1245566666   5


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCC-CcEEEEecccccc
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIY  191 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~vy  191 (349)
                      ++++++++..     ++|+|||+||.                    |+.++.++++++    ++.+ ..+||++||...+
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            6666666532     48999999993                    344555555544    4443 4689999997655


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC--CCc-----c
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK--RPV-----P  257 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~-----~  257 (349)
                      .....       ...|..+|.+++.+.+.       .|+++..++||++.++.....   .+...+...  .+.     .
T Consensus       200 ~~~~~-------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~  269 (317)
T 3oec_A          200 RGAPG-------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAE  269 (317)
T ss_dssp             SCCTT-------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHH
T ss_pred             CCCCC-------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHH
Confidence            32211       11123355554444332       389999999999987632110   001111000  000     0


Q ss_pred             cC-CCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          258 IP-GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       258 ~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      .+ ........+++.+|+|++++.++.+... ..|+++++.+|..
T Consensus       270 ~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          270 LFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             HHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            00 0011114578999999999999876543 4579999998853

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.52  E-value=1.8e-14  Score=131.00  Aligned_cols=201  Identities=17%  Similarity=0.183  Sum_probs=127.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l  144 (349)
                      .++|+||||    ||+|.||++++++|+++|+   .|++++|+.+..+++...    +.. .....+.++.+|   .+++
T Consensus        31 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           31 LAKKTVLIT----GASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT----IDQEFPNAKVHVAQLDITQAEKI  102 (287)
T ss_dssp             HTTCEEEEE----STTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH----HHHHCTTCEEEEEECCTTCGGGH
T ss_pred             cCCCEEEEe----cCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHH----HHhhCCCCeEEEEECCCCCHHHH
Confidence            357899999    9999999999999999988   999999987544322100    000 001234556666   6777


Q ss_pred             HhhhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      +++++..     ++|+|||+||.                     |+.++.++++++    ++.+..+||++||...+...
T Consensus       103 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          103 KPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             HHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC
Confidence            7777654     48999999993                     344555555554    55667899999997654321


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCC---CchHHHHHHHHhCCCcccCCCCCc
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      ..       ...|..+|.+++.+.+    |   .|+++..++||.+..+....   ..... .......           
T Consensus       183 ~~-------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~-----------  243 (287)
T 3rku_A          183 PT-------GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ-AKNVYKD-----------  243 (287)
T ss_dssp             TT-------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHH-HHHHHTT-----------
T ss_pred             CC-------CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHH-HHHhhcc-----------
Confidence            11       1112335555544433    2   38999999999998753100   00000 1111111           


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                       ..++..+|+|++++.++.++.. ..|+++.+.+++.
T Consensus       244 -~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          244 -TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             -SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             -cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence             1234899999999999988754 3457888888764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.52  E-value=1.3e-13  Score=121.46  Aligned_cols=183  Identities=13%  Similarity=0.144  Sum_probs=118.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....               ...++.+|   .++++++++
T Consensus         2 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~D~~~~~~~~~~~~   62 (236)
T 1ooe_A            2 SSGKVIVY----GGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---------------SNILVDGNKNWTEQEQSILE   62 (236)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---------------EEEECCTTSCHHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---------------ccEEEeCCCCCHHHHHHHHH
Confidence            35789999    999999999999999999999999998754321               12233445   555555554


Q ss_pred             C-------CCccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCC
Q 018900          150 G-------VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~-------~~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .       -++|+|||+||.                     |+.++.++++++...  +..+||++||...+.....   
T Consensus        63 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---  139 (236)
T 1ooe_A           63 QTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS---  139 (236)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT---
T ss_pred             HHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCC---
Confidence            2       258999999983                     233455666665442  1258999999876542111   


Q ss_pred             CCCCCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ...|..+|.+++.+.+    +     .++++.++|||++.++.         ........         ....+++
T Consensus       140 ----~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~~---------~~~~~~~  197 (236)
T 1ooe_A          140 ----MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---------NRKWMPNA---------DHSSWTP  197 (236)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---------HHHHSTTC---------CGGGCBC
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---------hhhcCCCc---------cccccCC
Confidence                1112235655554443    2     35899999999987652         22221111         1123578


Q ss_pred             HHHHHHHHHHHhcCCCc--cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA--ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~--~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++..+..  .+|+.+++.++.
T Consensus       198 ~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          198 LSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            89999999977744322  356888888764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.52  E-value=1.2e-13  Score=125.90  Aligned_cols=202  Identities=12%  Similarity=0.101  Sum_probs=127.8

Q ss_pred             ccceEEEEEecCCCcccc--hHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~--iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l  144 (349)
                      .++|+||||    ||+|+  ||++++++|+++|++|++++|+.+..+.        ..++.  ...+.++.+|   .+++
T Consensus        29 l~gk~~lVT----Gasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           29 LQGKRGLIL----GVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR--------VEPLAEELGAFVAGHCDVADAASI   96 (293)
T ss_dssp             TTTCEEEEE----CCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH--------HHHHHHHHTCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEE----cCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH--------HHHHHHhcCCceEEECCCCCHHHH
Confidence            356899999    99988  9999999999999999999998421111        01111  1134556666   5666


Q ss_pred             HhhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                      +++++..     ++|++||+||.                        |+.++.++++++...  +..+||++||...+..
T Consensus        97 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~  176 (293)
T 3grk_A           97 DAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV  176 (293)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC
Confidence            6665532     48999999984                        234566666666542  2459999999776543


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...       ...|..+|.+++.+.+.       .|+++..++||.+..+..... ....+........++         
T Consensus       177 ~~~-------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------  240 (293)
T 3grk_A          177 MPN-------YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------  240 (293)
T ss_dssp             CTT-------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------
T ss_pred             CCc-------hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------
Confidence            211       11122355555444332       389999999999988653321 112233333333332         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      ..+...+|+|++++.++.+... .+|+++++.+|..+
T Consensus       241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence            2246789999999999986543 46799999998643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.52  E-value=5.3e-14  Score=123.77  Aligned_cols=195  Identities=13%  Similarity=0.028  Sum_probs=122.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+....    +.......+.++.+|   ++++.++++
T Consensus         1 ~~k~vlIT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~   72 (235)
T 3l77_A            1 EMKVAVIT----GASRGIGEAIARALARDGYALALGARSVDRLEKIAHE----LMQEQGVEVFYHHLDVSKAESVEEFSK   72 (235)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence            36889999    9999999999999999999999999986543321100    000112345566666   667777766


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHh---CCCcEEEEeccccccCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~---~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                      ..     ++|++||+||.                    |+.++.++++++..   .+..++|++||...+.....     
T Consensus        73 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-----  147 (235)
T 3l77_A           73 KVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY-----  147 (235)
T ss_dssp             -HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT-----
T ss_pred             HHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC-----
Confidence            43     58999999993                    34556666665532   12346777766543221110     


Q ss_pred             CCCCCCCCChHHHHHHHHh-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          202 GDVVKPDAGHVQVEKYISE-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                        ...+..+|.+++.+.+.     .++++..++||.+..+.....          ..        ......+++.+|+|+
T Consensus       148 --~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~----------~~--------~~~~~~~~~p~dva~  207 (235)
T 3l77_A          148 --GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK----------PG--------KPKEKGYLKPDEIAE  207 (235)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC----------SC--------CCGGGTCBCHHHHHH
T ss_pred             --cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc----------CC--------cccccCCCCHHHHHH
Confidence              01123456665555443     389999999999866532210          00        111124688999999


Q ss_pred             HHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          277 MLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +++.++.++.. ..+++....+++.
T Consensus       208 ~v~~l~~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          208 AVRCLLKLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             HHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred             HHHHHHcCCCCCccceEEEeecccC
Confidence            99999998865 3445665555543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.51  E-value=2.7e-13  Score=119.79  Aligned_cols=183  Identities=11%  Similarity=0.111  Sum_probs=120.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....               ....+.+|   .++++++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~D~~~~~~v~~~~~   66 (241)
T 1dhr_A            6 EARRVLVY----GGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------------ASVIVKMTDSFTEQADQVTA   66 (241)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------------EEEECCCCSCHHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---------------CcEEEEcCCCCHHHHHHHHH
Confidence            46789999    999999999999999999999999998754321               11233344   566666655


Q ss_pred             C-------CCccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCC
Q 018900          150 G-------VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~-------~~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .       -++|+|||+||.                     |+.++.++++++...  +..+||++||...+.....   
T Consensus        67 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  143 (241)
T 1dhr_A           67 EVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG---  143 (241)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT---
T ss_pred             HHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC---
Confidence            2       258999999983                     233555666665442  1258999999876543211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH---------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          200 VEGDVVKPDAGHVQVEKYIS---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~---------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ...|..+|.+++.+.+         ..++++..++||.+-.+         +........         ....+++
T Consensus       144 ----~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~  201 (241)
T 1dhr_A          144 ----MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DFSSWTP  201 (241)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CGGGSEE
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc---------cccccCcch---------hhccCCC
Confidence                1112345665555443         23689999999988653         122221111         1123578


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|++++.++.+... .+|+.+.+.+++
T Consensus       202 ~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          202 LEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            89999999999976543 456888887764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.51  E-value=6.6e-14  Score=122.86  Aligned_cols=176  Identities=17%  Similarity=0.120  Sum_probs=111.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||+||||    ||+|+||++++++|+++|++|++++|+.+...++..       ++ ...+.++.+|   .++++++++.
T Consensus         1 Mk~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~D~~~~~~v~~~~~~   68 (230)
T 3guy_A            1 MSLIVIT----GASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN-------CL-SNNVGYRARDLASHQEVEQLFEQ   68 (230)
T ss_dssp             --CEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------TC-SSCCCEEECCTTCHHHHHHHHHS
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HH-hhccCeEeecCCCHHHHHHHHHH
Confidence            5789999    999999999999999999999999998754432211       11 2345666666   6777777766


Q ss_pred             CC--ccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          151 VT--FDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       151 ~~--~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      ..  +|+|||+||.                    |+.++.++++++    ++.+. +||++||...+.....       .
T Consensus        69 ~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~-------~  140 (230)
T 3guy_A           69 LDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQ-------E  140 (230)
T ss_dssp             CSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTT-------C
T ss_pred             HhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCC-------C
Confidence            53  5999999993                    345555555554    33343 9999999776543211       1


Q ss_pred             CCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHH
Q 018900          205 VKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                      ..|..+|.+++.+.+.       .|+++..++||.+..+...         .....         .....+++.+|+|++
T Consensus       141 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---------~~~~~---------~~~~~~~~~~dvA~~  202 (230)
T 3guy_A          141 STYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE---------TSGKS---------LDTSSFMSAEDAALM  202 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH---------hcCCC---------CCcccCCCHHHHHHH
Confidence            1122345554444332       2799999999998765321         11111         112357899999999


Q ss_pred             HHHHhcCCCc
Q 018900          278 LTLAVENPEA  287 (349)
Q Consensus       278 ~~~~~~~~~~  287 (349)
                      ++.++.++..
T Consensus       203 i~~l~~~~~~  212 (230)
T 3guy_A          203 IHGALANIGN  212 (230)
T ss_dssp             HHHHCCEETT
T ss_pred             HHHHHhCcCC
Confidence            9999986543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.51  E-value=4.1e-13  Score=121.76  Aligned_cols=214  Identities=14%  Similarity=0.103  Sum_probs=128.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC-----CCccc----cee--cCCCeEEEcC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----FNRFN----EIV--SAGGKTVWGD-  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~-----~~~~~----~l~--~~~~~~~~~D-  140 (349)
                      ++|+||||    ||+|.||++++++|+++|++|++++|+.+.........     .....    ++.  ...+.++.+| 
T Consensus        10 ~~k~~lVT----Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A           10 EGKVAFVT----GAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            46899999    99999999999999999999999999743221111000     00000    111  1245566666 


Q ss_pred             --hhhHHhhhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCC-CcEEEEecc
Q 018900          141 --PAEVGNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG-VKQFLFISS  187 (349)
Q Consensus       141 --~~~l~~~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss  187 (349)
                        +++++++++..     ++|++||+||.                     |+.++.++++++    ++.+ ..+||++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence              56666665422     47999999993                     334455555543    3333 469999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhC--CCc--
Q 018900          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK--RPV--  256 (349)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~--~~~--  256 (349)
                      ...+.....       ...|..+|.+++.+.+    |   .|+++..++||++..+.......   .......  .+.  
T Consensus       166 ~~~~~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~  235 (286)
T 3uve_A          166 VGGLKAYPH-------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT---FKMFRPDLENPGPD  235 (286)
T ss_dssp             GGGTSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH---HHHHCTTSSSCCHH
T ss_pred             hhhccCCCC-------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch---hhhccccccccchh
Confidence            776533211       1112235555444433    2   48999999999998876432100   0111000  000  


Q ss_pred             ---c--cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          257 ---P--IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       257 ---~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                         .  ...... ...+.+.+|+|++++.++.+... ..|+++++.+|..+
T Consensus       236 ~~~~~~~~~~~~-p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          236 DMAPICQMFHTL-PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHHHHHTTCSS-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hHHHHHHhhhcc-CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence               0  011111 14578999999999999976543 46799999988643

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.51  E-value=1.3e-14  Score=130.02  Aligned_cols=199  Identities=13%  Similarity=0.167  Sum_probs=121.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ...+.++.+|   ++++.++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (262)
T 1zem_A            6 NGKVCLVT----GAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-------ASVREKGVEARSYVCDVTSEEAVIGT   74 (262)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            46899999    99999999999999999999999999864432211       1111  1235556666   5555555


Q ss_pred             hcCC-----CccEEEeCCCC---------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|+|||+||.                     |+.++.+++++    +++.+..+||++||...+..... 
T Consensus        75 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  153 (262)
T 1zem_A           75 VDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN-  153 (262)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT-
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC-
Confidence            5432     47999999984                     23344445554    44446789999999765543211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC------------c--hHH-HHHHHHhCCC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD------------C--EEW-FFDRIVRKRP  255 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~------------~--~~~-~~~~~~~~~~  255 (349)
                            ...|..+|.+++.+.+       ..|+++.+++||.+..+.....            .  ... +...+....+
T Consensus       154 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (262)
T 1zem_A          154 ------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP  227 (262)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC
Confidence                  1112234554443332       2489999999998865421100            0  000 1111111111


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +         ..+...+|+|++++.++.++.. ..|+++.+.+|
T Consensus       228 ~---------~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          228 M---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             T---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             C---------CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            1         1256889999999999976543 45688887764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.51  E-value=1.4e-14  Score=129.99  Aligned_cols=205  Identities=12%  Similarity=0.144  Sum_probs=126.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++||||    ||+|.||++++++|+++|++|++++|+.+..++....    +.. .....+..+.+|   .+++.+++
T Consensus         7 ~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dv~~~~~v~~~~   78 (265)
T 3lf2_A            7 SEAVAVVT----GGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESA----LRQRFPGARLFASVCDVLDALQVRAFA   78 (265)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCceEEEEeCCCCCHHHHHHHH
Confidence            56899999    9999999999999999999999999986543321100    000 011135566666   55555555


Q ss_pred             cCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||...+.....   
T Consensus        79 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  155 (265)
T 3lf2_A           79 EACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH---  155 (265)
T ss_dssp             HHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC---
Confidence            432     47999999993                    344555555544    5556679999999765432211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCC---------chHHHHHHHHhCCCcccCCCCC
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKD---------CEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                          ...|..+|.+++.+.+    |   .|+++..++||.+..+.....         -...+...+......+      
T Consensus       156 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------  225 (265)
T 3lf2_A          156 ----MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP------  225 (265)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT------
T ss_pred             ----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC------
Confidence                1112234555444333    2   389999999999876531100         0011111111111111      


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                       ...+.+.+|+|++++.++.+... ..|+++++.+|.
T Consensus       226 -~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          226 -LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             -TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             -cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence             12357899999999999986543 456899999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.51  E-value=2.7e-14  Score=130.49  Aligned_cols=218  Identities=15%  Similarity=0.071  Sum_probs=128.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-CCCCCCCcc----ccee--cCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRF----NEIV--SAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~----~~l~--~~~~~~~~~D---~  141 (349)
                      .++|++|||    ||+|.||++++++|+++|++|++++|+.+.... +........    .++.  ...+.++.+|   .
T Consensus        26 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           26 VEGKVAFIT----GAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF  101 (299)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            356899999    999999999999999999999999997432110 000000000    1111  1245566666   5


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCC-CcEEEEeccccc
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGI  190 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~g-v~~~i~~Ss~~v  190 (349)
                      +++.++++..     ++|++||+||.                     |+.++.++++++    ++.+ ..+||++||...
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~  181 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG  181 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh
Confidence            5566555422     47999999983                     344555555543    3333 579999999776


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCccc-----
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI-----  258 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~-----  258 (349)
                      +.....       ...|..+|.+++.+.+    |   .|+++..++||.+..+..........+..........-     
T Consensus       182 ~~~~~~-------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (299)
T 3t7c_A          182 LRGAEN-------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS  254 (299)
T ss_dssp             TSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred             ccCCCC-------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence            533211       1112235555444333    2   38999999999998876432100000000000000000     


Q ss_pred             -CCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          259 -PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       259 -~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                       .... ....+...+|+|++++.++.++.. ..|+++++.+|..+
T Consensus       255 ~~~~~-~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          255 RQMHV-LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             HHHSS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhcc-cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence             0000 012467899999999999987643 45799999988643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.51  E-value=1.9e-12  Score=113.93  Aligned_cols=195  Identities=14%  Similarity=0.161  Sum_probs=128.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.+++.|.++|++|++++|+.+...+..           ...+..+.+|   +++++++++
T Consensus        10 ~GK~alVT----Gas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~   74 (242)
T 4b79_A           10 AGQQVLVT----GGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFE   74 (242)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHH
Confidence            58999999    99999999999999999999999999886654322           1234445555   777888877


Q ss_pred             CCC-ccEEEeCCCC------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCC
Q 018900          150 GVT-FDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (349)
Q Consensus       150 ~~~-~d~Vi~~a~~------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~  206 (349)
                      ..+ +|++||+||.                  |+.+    ++.++..+++.+ .++|++||...+.....       ...
T Consensus        75 ~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~-------~~~  146 (242)
T 4b79_A           75 ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSAD-------RPA  146 (242)
T ss_dssp             HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSS-------CHH
T ss_pred             hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCC-------CHH
Confidence            665 8999999994                  3333    344445555544 69999999654322111       111


Q ss_pred             CCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          207 PDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       207 ~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      |..+|.++..+       +..+|+++..+.||.+.-|..... .-....+.+.+..|+..         +...+|+|.++
T Consensus       147 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v  217 (242)
T 4b79_A          147 YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR---------WGEAPEVASAA  217 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS---------CBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHH
Confidence            22345443332       223489999999999976643221 11233455555555432         34678999999


Q ss_pred             HHHhcCCCc-cCCCEEEeeCCC
Q 018900          279 TLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       279 ~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +.++.+... ..|+++.+.+|-
T Consensus       218 ~fLaSd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          218 AFLCGPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhcCccCceEEECccH
Confidence            999877644 456899998773

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.51  E-value=6.5e-14  Score=130.58  Aligned_cols=200  Identities=16%  Similarity=0.138  Sum_probs=125.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      .++|+||||    ||+|.||++++++|+++|++|++++|+.+...++.........++..  ..+.++.+|   ++++++
T Consensus        43 l~gk~vlVT----Gas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           43 LAGCTVFIT----GASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            357899999    99999999999999999999999999987654432211111112221  234455566   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+..... 
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~-  197 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF-  197 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC-
Confidence            66533     58999999993                    556666666655    5666789999999765432100 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h--hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                          .....|..+|.+++.+.+    |  .++++..+.||.++...        +.+.+....+         ...+...
T Consensus       198 ----~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------~~~~~~~~~~---------~~r~~~p  256 (346)
T 3kvo_A          198 ----KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------AMDMLGGPGI---------ESQCRKV  256 (346)
T ss_dssp             ----SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------HHHHHCC--C---------GGGCBCT
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------HHHhhccccc---------cccCCCH
Confidence                011122345555444333    2  37899999998643321        2222211111         2235688


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      +|+|++++.++.+....+|+++ +.++
T Consensus       257 edvA~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          257 DIIADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             HHHHHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             HHHHHHHHHHHhcCCCCCceEE-ECCc
Confidence            9999999999988433456766 5443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.51  E-value=4.5e-14  Score=126.49  Aligned_cols=180  Identities=17%  Similarity=0.173  Sum_probs=113.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ..+++||||    ||+|+||++++++|+++|++|++++|+.+...++.       .++.  ...+.++.+|   .+++.+
T Consensus        27 l~~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~   95 (262)
T 3rkr_A           27 LSGQVAVVT----GASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-------REIVAAGGEAESHACDLSHSDAIAA   95 (262)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHHhCCceeEEEecCCCHHHHHH
Confidence            356899999    99999999999999999999999999875443211       1111  1235566666   556666


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|+|||+||.                     |+.++.+++++    +++.+..+||++||...+....+
T Consensus        96 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  175 (262)
T 3rkr_A           96 FATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD  175 (262)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC
Confidence            55442     48999999984                     23444444444    55567789999999765432211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...+..+|.+.+.+.+       ..++++..++||.+..+....         ....         .....++
T Consensus       176 -------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~~---------~~~~~~~  230 (262)
T 3rkr_A          176 -------GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG---------LSAK---------KSALGAI  230 (262)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc---------cccc---------cccccCC
Confidence                   1112234555444433       248999999999986653211         1111         1123467


Q ss_pred             eHHHHHHHHHHHhcCCCc
Q 018900          270 HVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~  287 (349)
                      +.+|+|++++.++..+..
T Consensus       231 ~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          231 EPDDIADVVALLATQADQ  248 (262)
T ss_dssp             CHHHHHHHHHHHHTCCTT
T ss_pred             CHHHHHHHHHHHhcCccc
Confidence            899999999999987654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.50  E-value=4.5e-14  Score=125.68  Aligned_cols=200  Identities=16%  Similarity=0.167  Sum_probs=126.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|.||++++++|+++|++|+++.+.. +...+.       ..++..  ..+..+.+|   .++++.
T Consensus         6 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            6 KGKVALVT----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET-------VYEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH-------HHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH-------HHHHHhcCCceEEEecCcCCHHHHHH
Confidence            46899999    9999999999999999999999875443 322211       111111  234455555   444444


Q ss_pred             hhcC-----------CCccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          147 VVGG-----------VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       147 ~~~~-----------~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                      +++.           .++|+|||+||.                    |+.++.++++++...  +..++|++||...+..
T Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~  154 (255)
T 3icc_A           75 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  154 (255)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC
Confidence            4432           138999999993                    455677777777654  3458999999776543


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHH-HHHHHHhCCCcccCCCCCcc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...       ...|..+|.+.+.+.+       ..++++..++||.+..+......... +........++         
T Consensus       155 ~~~-------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------  218 (255)
T 3icc_A          155 LPD-------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF---------  218 (255)
T ss_dssp             CTT-------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT---------
T ss_pred             CCC-------cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc---------
Confidence            211       1112334555444332       23899999999999887543321111 12222222221         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+.+.+|+|++++.++..... .+|+++++.+|.
T Consensus       219 ~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          219 NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             CCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            2356899999999999876543 467999999885

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.50  E-value=3.8e-14  Score=127.49  Aligned_cols=199  Identities=17%  Similarity=0.166  Sum_probs=122.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC-CcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||+|+||++++++|+++|++|+++++..+ ..+++.       .++.  ...+.++.+|   .+++++
T Consensus        26 ~~k~~lVT----Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~v~~   94 (267)
T 3u5t_A           26 TNKVAIVT----GASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVA-------GKIEAAGGKALTAQADVSDPAAVRR   94 (267)
T ss_dssp             -CCEEEEE----SCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-------HHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            35789999    99999999999999999999999865442 221110       0111  1234555666   566666


Q ss_pred             hhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +++..     ++|++||+||.                    |+.++.++++++...  +..++|++||...+.....   
T Consensus        95 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  171 (267)
T 3u5t_A           95 LFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS---  171 (267)
T ss_dssp             HHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC---
Confidence            65532     48999999993                    455666777666442  2358999999765433211   


Q ss_pred             CCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+.       .|+++..++||.+..+.............+....+         ...+...+
T Consensus       172 ----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~pe  238 (267)
T 3u5t_A          172 ----YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAP---------LERLGTPQ  238 (267)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSST---------TCSCBCHH
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHH
Confidence                11123456555554432       27999999999997764322111111222222222         12457899


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      |+|++++.++..... .+|+++++.+|
T Consensus       239 dvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          239 DIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHHHHHHHhCccccCccCCEEEeCCC
Confidence            999999999987644 46689999876

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.49  E-value=5.3e-14  Score=124.68  Aligned_cols=194  Identities=12%  Similarity=0.111  Sum_probs=120.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-E--cCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh--
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-T--VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV--  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~--R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~--  148 (349)
                      +|+||||    ||+|+||++++++|+++|++|+++ +  |+.+..+++.       .++  .+.++.  |.+++++++  
T Consensus         1 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~-------~~~--~~~~~~--~~~~v~~~~~~   65 (244)
T 1zmo_A            1 MVIALVT----HARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE-------SEN--PGTIAL--AEQKPERLVDA   65 (244)
T ss_dssp             -CEEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-------HHS--TTEEEC--CCCCGGGHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHH-------HHh--CCCccc--CHHHHHHHHHH
Confidence            4789999    999999999999999999999999 6  8764433211       111  122222  544444333  


Q ss_pred             --cCC-CccEEEeCCCCC-----------------------hhhHHHHHH----HHHhCCCcEEEEeccccccCCCCCCC
Q 018900          149 --GGV-TFDVVLDNNGKN-----------------------LDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 --~~~-~~d~Vi~~a~~~-----------------------~~~~~~ll~----~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                        +.. ++|+|||+||..                       +.++.++++    .+++.+..+||++||...+.....  
T Consensus        66 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--  143 (244)
T 1zmo_A           66 TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY--  143 (244)
T ss_dssp             HGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC--
Confidence              222 489999999832                       223334444    445667789999999776543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCC---CCCch-HHHHHHHHh-CCCcccCCCCCcce
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGN---NKDCE-EWFFDRIVR-KRPVPIPGSGMQFT  266 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~---~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~  266 (349)
                           ...|..+|.+++.+.+.       .++++..++||.+..+..   .. .. ......+.. ..++         .
T Consensus       144 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~p~---------~  208 (244)
T 1zmo_A          144 -----NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSD-WENNPELRERVDRDVPL---------G  208 (244)
T ss_dssp             -----CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHH-HHHCHHHHHHHHHHCTT---------C
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccc-ccchHHHHHHHhcCCCC---------C
Confidence                 11233456665554432       389999999999876643   11 00 011112211 1111         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+...+|+|++++.++.+... ..|+.+.+.+|.
T Consensus       209 r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          209 RLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             SCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            256899999999999987543 456899888774

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.49  E-value=3.5e-14  Score=127.44  Aligned_cols=198  Identities=17%  Similarity=0.143  Sum_probs=116.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|.||++++++|+++|++|++++|+.+..+++.       .++.  ...+..+.+|   .++++++
T Consensus         3 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~d~~~v~~~   71 (264)
T 3tfo_A            3 MDKVILIT----GASGGIGEGIARELGVAGAKILLGARRQARIEAIA-------TEIRDAGGTALAQVLDVTDRHSVAAF   71 (264)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            46789999    99999999999999999999999999875443211       1111  1234455566   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHH----HHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~l----l~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|++||+||.                    |+.++.++    +..+++.+..+||++||...+.....  
T Consensus        72 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--  149 (264)
T 3tfo_A           72 AQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT--  149 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC--
Confidence            5432     47999999993                    34444444    44455567789999999775543211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH----hh-CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS----EN-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~----~~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                           ...|..+|.+++.+.+    +. ++++..++||.+..+....         ...........  .....++..+|
T Consensus       150 -----~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~---------~~~~~~~~~~~--~~~~~~~~ped  213 (264)
T 3tfo_A          150 -----AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT---------ITHEETMAAMD--TYRAIALQPAD  213 (264)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----------------------------------CCCHHH
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc---------ccchhHHHHHH--hhhccCCCHHH
Confidence                 1112334555444332    22 7899999999987654321         11110000000  01112468999


Q ss_pred             HHHHHHHHhcCCCcc-CCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEAA-SSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~~-~~~~~~i~~~~  299 (349)
                      +|++++.++.++... .+++.....++
T Consensus       214 vA~~v~~l~s~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          214 IARAVRQVIEAPQSVDTTEITIRPTAS  240 (264)
T ss_dssp             HHHHHHHHHHSCTTEEEEEEEEEECC-
T ss_pred             HHHHHHHHhcCCccCccceEEEecCcc
Confidence            999999999987652 22444444443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.49  E-value=1.4e-13  Score=123.41  Aligned_cols=206  Identities=13%  Similarity=0.107  Sum_probs=128.5

Q ss_pred             ccceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecCCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~  145 (349)
                      .++++||||    ||+  |.||++++++|+++|++|++++|+.+.. .+...    .+.+.....+.++.+|   .++++
T Consensus        18 l~~k~vlIT----Gas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~v~   89 (267)
T 3gdg_A           18 LKGKVVVVT----GASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVK----ELEKTYGIKAKAYKCQVDSYESCE   89 (267)
T ss_dssp             CTTCEEEET----TCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHH----HHHHHHCCCEECCBCCTTCHHHHH
T ss_pred             cCCCEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHH----HHHHhcCCceeEEecCCCCHHHHH
Confidence            357899999    999  9999999999999999999999876443 11000    0001112234455555   56666


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++++..     ++|+|||+||.                    |+.++.++++++    ++.+..+||++||...+.....
T Consensus        90 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  169 (267)
T 3gdg_A           90 KLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP  169 (267)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC
Confidence            665543     58999999993                    344555555554    5566679999999765432110


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHh----h--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~~----~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                           .....|..+|.+.+.+.+.    +  .+++..+.||.+..+.... ........+....+         ...+.+
T Consensus       170 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~r~~~  234 (267)
T 3gdg_A          170 -----QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF-VPKETQQLWHSMIP---------MGRDGL  234 (267)
T ss_dssp             -----SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG-SCHHHHHHHHTTST---------TSSCEE
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh-CCHHHHHHHHhcCC---------CCCCcC
Confidence                 0111123355555444432    2  3788999999987654321 12222223322222         234578


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      .+|+|++++.++.+... .+|+++++.+|..
T Consensus       235 ~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          235 AKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             THHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             HHHHHhHhheeecCccccccCCEEEECCcee
Confidence            99999999999986543 4679999998853

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.48  E-value=8.5e-14  Score=122.74  Aligned_cols=176  Identities=14%  Similarity=0.109  Sum_probs=112.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++ ..++.++.+|   .++++++++
T Consensus         2 s~k~vlVT----Gas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~v~~~~~   69 (235)
T 3l6e_A            2 SLGHIIVT----GAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE-------LLL-GNAVIGIVADLAHHEDVDVAFA   69 (235)
T ss_dssp             -CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-GGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-cCCceEEECCCCCHHHHHHHHH
Confidence            35789999    99999999999999999999999999875443211       111 2246666776   556665554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.++.++++++    ++.+ .++|++||...+.....    
T Consensus        70 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~----  144 (235)
T 3l6e_A           70 AAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKAN----  144 (235)
T ss_dssp             HHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSS----
T ss_pred             HHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCC----
Confidence            32     47999999993                    344555555544    4444 39999999664432111    


Q ss_pred             CCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+.       .|+++..++||.+..+....         ... .         ....+++.+|
T Consensus       145 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------~~~-~---------~~~~~~~ped  202 (235)
T 3l6e_A          145 ---ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN---------TDH-V---------DPSGFMTPED  202 (235)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHH
T ss_pred             ---CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc---------cCC-C---------CCcCCCCHHH
Confidence               11223455555444332       37899999999986653221         000 0         1124689999


Q ss_pred             HHHHHHHHhcCCCc
Q 018900          274 LSSMLTLAVENPEA  287 (349)
Q Consensus       274 va~~~~~~~~~~~~  287 (349)
                      +|++++.++.++..
T Consensus       203 vA~~v~~l~~~~~~  216 (235)
T 3l6e_A          203 AAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHhCCCC
Confidence            99999999987654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.48  E-value=4e-13  Score=130.76  Aligned_cols=202  Identities=15%  Similarity=0.158  Sum_probs=131.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      .+++||||    ||+|+||.+++++|+++|++ |++++|+.........    ...++..  ..+.++.+|   .+++..
T Consensus       225 ~~~~vLIT----GgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dv~d~~~v~~  296 (486)
T 2fr1_A          225 PTGTVLVT----GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGE----LVAELEALGARTTVAACDVTDRESVRE  296 (486)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHH----HHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            46789999    99999999999999999995 9999997642211000    0011221  235566666   667777


Q ss_pred             hhcCC----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEeccc-cccCCCCCCCCCC
Q 018900          147 VVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSA-GIYKPADEPPHVE  201 (349)
Q Consensus       147 ~~~~~----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~-~vy~~~~~~~~~e  201 (349)
                      +++..    ++|.|||+||.                    |+.++.+++++++..+.++||++||. +++|....     
T Consensus       297 ~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~-----  371 (486)
T 2fr1_A          297 LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL-----  371 (486)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC-----
T ss_pred             HHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC-----
Confidence            77664    47999999993                    46788999999998889999999996 45554322     


Q ss_pred             CCCCCCCCChHHHHHHHH---hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          202 GDVVKPDAGHVQVEKYIS---ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                         ..|..+|...+.+..   ..|+++++++||.+.+++....        ... ..+.     .....+++.+|+++++
T Consensus       372 ---~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~--------~~~-~~~~-----~~g~~~i~~e~~a~~l  434 (486)
T 2fr1_A          372 ---GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--------PVA-DRFR-----RHGVIEMPPETACRAL  434 (486)
T ss_dssp             ---TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------------CT-----TTTEECBCHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccch--------hHH-HHHH-----hcCCCCCCHHHHHHHH
Confidence               122335555554443   3499999999999887642211        100 0110     1125679999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCCccCHHHHHHHHH
Q 018900          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA  311 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~  311 (349)
                      ..++..+..   .+ .+.   .+.|..+...+.
T Consensus       435 ~~~l~~~~~---~~-~v~---~~d~~~~~~~~~  460 (486)
T 2fr1_A          435 QNALDRAEV---CP-IVI---DVRWDRFLLAYT  460 (486)
T ss_dssp             HHHHHTTCS---SC-EEC---EECHHHHHHHHT
T ss_pred             HHHHhCCCC---eE-EEE---eCCHHHHhhhhc
Confidence            999987654   22 222   256777765443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.47  E-value=5.1e-13  Score=121.28  Aligned_cols=198  Identities=16%  Similarity=0.139  Sum_probs=123.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCccccee---cCCCeEEEcC-------h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV---SAGGKTVWGD-------P  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~---~~~~~~~~~D-------~  141 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+. +...++.       .++.   ...+.++.+|       .
T Consensus        22 ~~k~~lVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-------~~l~~~~~~~~~~~~~Dv~~~~~~~   90 (288)
T 2x9g_A           22 EAPAAVVT----GAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA-------DELNKERSNTAVVCQADLTNSNVLP   90 (288)
T ss_dssp             CCCEEEET----TCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-------HHHHHHSTTCEEEEECCCSCSTTHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-------HHHHhhcCCceEEEEeecCCccCCH
Confidence            46889999    9999999999999999999999999987 4332111       1111   1234455555       4


Q ss_pred             hhHHhhhcCC-----CccEEEeCCCCC------------------------------hhhHHHHHHHH----HhCC----
Q 018900          142 AEVGNVVGGV-----TFDVVLDNNGKN------------------------------LDAVRPVADWA----KSSG----  178 (349)
Q Consensus       142 ~~l~~~~~~~-----~~d~Vi~~a~~~------------------------------~~~~~~ll~~a----~~~g----  178 (349)
                      +++.++++..     ++|+|||+||..                              +.++..+++++    ++.+    
T Consensus        91 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  170 (288)
T 2x9g_A           91 ASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCT  170 (288)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCC
Confidence            5555555422     479999999842                              11233444443    3333    


Q ss_pred             --CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHH
Q 018900          179 --VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDR  249 (349)
Q Consensus       179 --v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~  249 (349)
                        ..+||++||...+.....       ...|..+|.+++.+.+.       .|+++.+++||.++++. ..  .......
T Consensus       171 ~~~g~iv~isS~~~~~~~~~-------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~--~~~~~~~  240 (288)
T 2x9g_A          171 SSNLSIVNLCDAMVDQPCMA-------FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM--GEEEKDK  240 (288)
T ss_dssp             CCCEEEEEECCTTTTSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS--CHHHHHH
T ss_pred             CCCeEEEEEecccccCCCCC-------CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc--ChHHHHH
Confidence              469999999776543211       11123355554443332       38999999999999886 21  1222333


Q ss_pred             HHhCCCcccCCCCCcceee-eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          250 IVRKRPVPIPGSGMQFTNI-AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~-i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +....++         ..+ .+.+|+|++++.++.+... ..|+++++.+|..
T Consensus       241 ~~~~~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          241 WRRKVPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHTCTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhhCCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            3333222         113 5789999999999986533 4568999988753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.47  E-value=2.5e-13  Score=120.59  Aligned_cols=187  Identities=19%  Similarity=0.147  Sum_probs=116.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+++.       .++.  ..++.++.+|   +++++++
T Consensus         6 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dv~~~~~~~~~   74 (247)
T 2jah_A            6 QGKVALIT----GASSGIGEATARALAAEGAAVAIAARRVEKLRALG-------DELTAAGAKVHVLELDVADRQGVDAA   74 (247)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46899999    99999999999999999999999999864432211       1111  1235556666   5666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|+|||+||.                    |+.++.++++++    ++.+ .+||++||...+.....  
T Consensus        75 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~--  151 (247)
T 2jah_A           75 VASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRN--  151 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCC--
Confidence            5432     47999999983                    344555555544    4445 79999999765432110  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.+++.+.+       ..|+++.+++||.+..+......... ........    ++    +..+++.
T Consensus       152 -----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~----~~----~~~~~~p  217 (247)
T 2jah_A          152 -----AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQR----IS----QIRKLQA  217 (247)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHHH----TT----TSCCBCH
T ss_pred             -----CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHhc----cc----ccCCCCH
Confidence                 1112234554443332       24899999999999876432110011 11111110    11    1125789


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +|+|++++.++.++..
T Consensus       218 edvA~~v~~l~s~~~~  233 (247)
T 2jah_A          218 QDIAEAVRYAVTAPHH  233 (247)
T ss_dssp             HHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHhCCCcc
Confidence            9999999999987644

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.47  E-value=7.5e-14  Score=126.44  Aligned_cols=198  Identities=15%  Similarity=0.162  Sum_probs=123.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...++.        ......+.++.+|   .+++.++++
T Consensus         4 ~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~~   71 (281)
T 3zv4_A            4 TGEVALIT----GGASGLGRALVDRFVAEGARVAVLDKSAERLRELE--------VAHGGNAVGVVGDVRSLQDQKRAAE   71 (281)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTBTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH--------HHcCCcEEEEEcCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999875443221        1112345666666   555555554


Q ss_pred             CC-----CccEEEeCCCC-------------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCC
Q 018900          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~-------------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      ..     ++|++||+||.                         |+.++.++++++    ++.+ .++|++||...+....
T Consensus        72 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           72 RCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNG  150 (281)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSS
T ss_pred             HHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCC
Confidence            33     47999999984                         233444455544    3333 5999999976543221


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHh----h--CCcEEEEecCceeeCCCCCC---chH------HHHHHHHhCCCcccCC
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNKD---CEE------WFFDRIVRKRPVPIPG  260 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~~----~--~~~~~ilR~~~v~g~~~~~~---~~~------~~~~~~~~~~~~~~~~  260 (349)
                      .       ...|..+|.+++.+.+.    .  .+++..++||.+..+.....   ...      .+...+....++    
T Consensus       151 ~-------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----  219 (281)
T 3zv4_A          151 G-------GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI----  219 (281)
T ss_dssp             S-------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT----
T ss_pred             C-------CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC----
Confidence            1       11123455555444332    2  38899999999977643211   000      011222222222    


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcC-CCc-cCCCEEEeeCCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVEN-PEA-ASSNIFNLVSDR  299 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~-~~~-~~~~~~~i~~~~  299 (349)
                           ..+...+|+|++++.++.+ ... ..|+++++.+|.
T Consensus       220 -----~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~  255 (281)
T 3zv4_A          220 -----GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM  255 (281)
T ss_dssp             -----SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred             -----CCCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence                 2356789999999999984 333 467999999885

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.47  E-value=5.4e-13  Score=121.36  Aligned_cols=200  Identities=12%  Similarity=0.087  Sum_probs=126.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEE-cCCCCcccCCCCCCCccccee---cCCCeEEEcC---hh---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV---SAGGKTVWGD---PA---  142 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~D---~~---  142 (349)
                      ++|+||||    ||+|.||++++++|+++|++|++++ |+.+...++.       .++.   ...+.++.+|   .+   
T Consensus         8 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~Dl~~~~~~~   76 (291)
T 1e7w_A            8 TVPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS-------ATLNARRPNSAITVQADLSNVATAP   76 (291)
T ss_dssp             CCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHSTTCEEEEECCCSSSCBCC
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-------HHHhhhcCCeeEEEEeecCCccccc
Confidence            46789999    9999999999999999999999999 8764332211       1111   1234555565   45   


Q ss_pred             --------------hHHhhhcCC-----CccEEEeCCCCC----------------------------------hhhHHH
Q 018900          143 --------------EVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVRP  169 (349)
Q Consensus       143 --------------~l~~~~~~~-----~~d~Vi~~a~~~----------------------------------~~~~~~  169 (349)
                                    ++.++++..     ++|++||+||..                                  +.++.+
T Consensus        77 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  156 (291)
T 1e7w_A           77 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF  156 (291)
T ss_dssp             CC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHH
T ss_pred             ccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHH
Confidence                          666666533     479999999842                                  122333


Q ss_pred             HHH----HHHhCC------CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCc
Q 018900          170 VAD----WAKSSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQY  232 (349)
Q Consensus       170 ll~----~a~~~g------v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~  232 (349)
                      +++    .+++.+      ..+||++||...+.....       ...|..+|.+++.+.+       ..++++..++||.
T Consensus       157 l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~-------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~  229 (291)
T 1e7w_A          157 LIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG-------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL  229 (291)
T ss_dssp             HHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             HHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCCC-------CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence            334    444555      679999999765543211       1122335555444332       2389999999999


Q ss_pred             eeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          233 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       233 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +..+. .  ....+...+....++.        ..+.+.+|+|++++.++.++.. ..|+++++.+|..+
T Consensus       230 v~T~~-~--~~~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          230 SVLVD-D--MPPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             BCCGG-G--SCHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCc-c--CCHHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            87664 2  1122333333222211        0246789999999999976533 45689999888543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.45  E-value=4.5e-13  Score=120.79  Aligned_cols=194  Identities=13%  Similarity=0.116  Sum_probs=119.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|.||++++++|+++|++|++++|+.+..+++.........++.  ...+.++.+|   .++++++
T Consensus         5 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            5 SGKTLFIT----GASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            57899999    9999999999999999999999999988655433221110111111  2234556666   5566655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|++||+||.                    |+.++.++.++    +++.+..++|++||...+.....  
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--  158 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWW--  158 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHH--
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--
Confidence            5432     48999999993                    44555555554    45566779999999764432100  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         .....|..+|.+++.+.+       ..|+++..++||.+.....        . ....+.+         ...+...
T Consensus       159 ---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~--------~-~~~~~~~---------~~~~~~p  217 (274)
T 3e03_A          159 ---GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA--------I-NMLPGVD---------AAACRRP  217 (274)
T ss_dssp             ---HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCC---------GGGSBCT
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch--------h-hhccccc---------ccccCCH
Confidence               000112235555444333       2389999999995443221        1 1111111         1225689


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEE
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIF  293 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~  293 (349)
                      +|+|++++.++.++.. .+|+++
T Consensus       218 edvA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          218 EIMADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHHHHHHhCccccccCCeEE
Confidence            9999999999987644 355666

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.44  E-value=2e-13  Score=121.41  Aligned_cols=194  Identities=12%  Similarity=0.095  Sum_probs=118.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce--ecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~~~  147 (349)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+..++....    +...  ....+.++.+|   .++++++
T Consensus         6 ~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (250)
T 3nyw_A            6 QKGLAIIT----GASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDE----IMRSNKHVQEPIVLPLDITDCTKADTE   77 (250)
T ss_dssp             CCCEEEEE----STTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHH----HHHHCTTSCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHhccccCcceEEeccCCCHHHHHHH
Confidence            56899999    9999999999999999999999999987544321100    0000  01345566666   5555555


Q ss_pred             hcCC-----CccEEEeCCCC-------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..     ++|++||+||.                   |+.++..++++    +++.+..++|++||...+....  + 
T Consensus        78 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~-  154 (250)
T 3nyw_A           78 IKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFA--D-  154 (250)
T ss_dssp             HHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------C--C-
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCC--C-
Confidence            5432     48999999994                   33444445554    4556678999999965432111  0 


Q ss_pred             CCCCCCCCCCChHHHHHHHH----h---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~----~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+.+.+.+    +   .|+++..++||.+..+         +.....  ..       .....+++.+
T Consensus       155 ----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------~~~~~~--~~-------~~~~~~~~p~  212 (250)
T 3nyw_A          155 ----GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------MAKKAG--TP-------FKDEEMIQPD  212 (250)
T ss_dssp             ----TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------HHHHTT--CC-------SCGGGSBCHH
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------hhhhcC--CC-------cccccCCCHH
Confidence                1122335555444333    2   3899999999988653         122211  11       1123478999


Q ss_pred             HHHHHHHHHhcCCCc--cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA--ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~--~~~~~~~i~~~~  299 (349)
                      |+|++++.++..+..  .++-++.+.+++
T Consensus       213 dva~~v~~l~s~~~~~~~~~~~i~vd~~~  241 (250)
T 3nyw_A          213 DLLNTIRCLLNLSENVCIKDIVFEMKKSI  241 (250)
T ss_dssp             HHHHHHHHHHTSCTTEECCEEEEEEHHHH
T ss_pred             HHHHHHHHHHcCCCceEeeEEEEEeeccc
Confidence            999999999997654  232344554443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.44  E-value=3.3e-13  Score=131.92  Aligned_cols=203  Identities=16%  Similarity=0.149  Sum_probs=133.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~  146 (349)
                      .+++||||    ||+|+||.+++++|.++|+ +|++++|+........    ....++...  .+.++.+|   .+++.+
T Consensus       258 ~~~~vLIT----GgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~----~l~~~l~~~g~~v~~~~~Dvtd~~~v~~  329 (511)
T 2z5l_A          258 PSGTVLIT----GGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAA----ELAEELRGHGCEVVHAACDVAERDALAA  329 (511)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHH----HHHHHHHTTTCEEEEEECCSSCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHH----HHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            46789999    9999999999999999999 5888999763221100    001122222  35556666   677888


Q ss_pred             hhcCCCccEEEeCCCC--------------------ChhhHHHHHHHHHhC-CCcEEEEeccc-cccCCCCCCCCCCCCC
Q 018900          147 VVGGVTFDVVLDNNGK--------------------NLDAVRPVADWAKSS-GVKQFLFISSA-GIYKPADEPPHVEGDV  204 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~-~vy~~~~~~~~~e~~~  204 (349)
                      +++..++|+|||+||.                    |+.++.++.++++.. +.++||++||. +++|....        
T Consensus       330 ~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~--------  401 (511)
T 2z5l_A          330 LVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQ--------  401 (511)
T ss_dssp             HHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTB--------
T ss_pred             HHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCC--------
Confidence            8876558999999993                    466788888888877 78899999996 45654321        


Q ss_pred             CCCCCChHHHHHHHH---hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHH
Q 018900          205 VKPDAGHVQVEKYIS---ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA  281 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  281 (349)
                      ..|..+|..++.+.+   ..|+++++++||.+.+.+......   ...+..           ....+++.+|+++++..+
T Consensus       402 ~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~---~~~~~~-----------~g~~~l~~e~~a~~l~~a  467 (511)
T 2z5l_A          402 GAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAG---EESLSR-----------RGLRAMDPDAAVDALLGA  467 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH---HHHHHH-----------HTBCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccccc---HHHHHh-----------cCCCCCCHHHHHHHHHHH
Confidence            112234555555544   348999999999884433322211   111111           113468999999999999


Q ss_pred             hcCCCccCCCEEEeeCCCccCHHHHHHHHHH
Q 018900          282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  312 (349)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~  312 (349)
                      +..+..    .+.+.   .+.|..+...+..
T Consensus       468 l~~~~~----~v~v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          468 MGRNDV----CVTVV---DVDWERFAPATNA  491 (511)
T ss_dssp             HHHTCS----EEEEC---CBCHHHHHHHHHH
T ss_pred             HhCCCC----EEEEE---eCCHHHHHhhhcc
Confidence            987643    23333   2567777766554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.44  E-value=2.3e-13  Score=120.59  Aligned_cols=191  Identities=14%  Similarity=0.089  Sum_probs=119.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc-----ChhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-----DPAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----D~~~l~~  146 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+..+++...    +.........++..     |.+++.+
T Consensus        12 l~~k~vlIT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~d~d~~~~~~~~~   83 (247)
T 3i1j_A           12 LKGRVILVT----GAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQ----IKSAGQPQPLIIALNLENATAQQYRE   83 (247)
T ss_dssp             TTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTSCCCEEEECCTTTCCHHHHHH
T ss_pred             CCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHH----HHhcCCCCceEEEeccccCCHHHHHH
Confidence            357899999    9999999999999999999999999986544321100    00111123344443     3455555


Q ss_pred             hhcCC-----CccEEEeCCCC---------------------ChhhHHHHHHHH----HhCCCcEEEEeccccccCCCCC
Q 018900          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       147 ~~~~~-----~~d~Vi~~a~~---------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      +++..     ++|+|||+||.                     |+.++.++++++    ++.+..++|++||...+.....
T Consensus        84 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  163 (247)
T 3i1j_A           84 LAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN  163 (247)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC
Confidence            55432     47999999983                     344555555555    6666789999999765432211


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH----h----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS----E----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~----~----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                             ...|..+|.+++.+.+    +    .++++..++||.+..+         +........         ....+
T Consensus       164 -------~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~~---------~~~~~  218 (247)
T 3i1j_A          164 -------WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG---------MRAQAYPDE---------NPLNN  218 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH---------HHHHHSTTS---------CGGGS
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc---------cchhccccc---------CccCC
Confidence                   1122335555554433    2    3678899999987543         222222111         11235


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEe
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNL  295 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i  295 (349)
                      ...+|+|++++.++.+... .+|+.+++
T Consensus       219 ~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          219 PAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             CCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             CCHHHHHHHHHHHhCchhccccCeeecC
Confidence            6789999999999976543 45677764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.44  E-value=3.2e-12  Score=113.12  Aligned_cols=191  Identities=15%  Similarity=0.209  Sum_probs=121.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |.|+||||    ||++.||+.+++.|+++|++|++.+|+++...++....         .++..+.+|   +++++++++
T Consensus         1 MnK~vlVT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~v~   67 (247)
T 3ged_A            1 MNRGVIVT----GGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER---------PNLFYFHGDVADPLTLKKFVE   67 (247)
T ss_dssp             -CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC---------TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------CCEEEEEecCCCHHHHHHHHH
Confidence            56899999    99999999999999999999999999875544322211         234455566   555555543


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+ .++|++||...+.....    
T Consensus        68 ~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~----  142 (247)
T 3ged_A           68 YAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPD----  142 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCC----
Confidence            22     38999999983                    3334    444455556555 69999999764332111    


Q ss_pred             CCCCCCCCCChHHHHHHH----Hhh--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          201 EGDVVKPDAGHVQVEKYI----SEN--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~----~~~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                         ...|..+|.++..+-    .|.  ++++..+.||.+--+....     +.+......|+.         -+...+|+
T Consensus       143 ---~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-----~~~~~~~~~Pl~---------R~g~pedi  205 (247)
T 3ged_A          143 ---SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-----FTQEDCAAIPAG---------KVGTPKDI  205 (247)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTSTTS---------SCBCHHHH
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-----HHHHHHhcCCCC---------CCcCHHHH
Confidence               111223454433222    222  7899999999986554322     233333333332         13468999


Q ss_pred             HHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          275 SSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      |++++.++... -..|+++.+.+|-
T Consensus       206 A~~v~fL~s~~-~iTG~~i~VDGG~  229 (247)
T 3ged_A          206 SNMVLFLCQQD-FITGETIIVDGGM  229 (247)
T ss_dssp             HHHHHHHHHCS-SCCSCEEEESTTG
T ss_pred             HHHHHHHHhCC-CCCCCeEEECcCH
Confidence            99999999753 4456999999873

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.42  E-value=2.7e-13  Score=122.83  Aligned_cols=190  Identities=15%  Similarity=0.149  Sum_probs=114.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..++....    +.......+.++.+|   .+++++++
T Consensus        31 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           31 GEGRIALVT----GGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGE----IGGRTGNIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             ---CEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCeEEEEEcCCCCHHHHHHHH
Confidence            357899999    9999999999999999999999999987543321100    000011113556666   56666665


Q ss_pred             cCC-----CccEEEeCCCC---------------------Chhh----HHHHHHHHHhCC--CcEEEEeccccccCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKPADE  196 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~  196 (349)
                      +..     ++|+|||+||.                     |+.+    ++.++..+++.+  ..+||++||...+....+
T Consensus       103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  182 (281)
T 4dry_A          103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN  182 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC
Confidence            533     47999999984                     2333    344455555554  569999999765432111


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                             ...|..+|.+++.+.+       ..++++..++||.+..+...         .+..+ ...... ......++
T Consensus       183 -------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------~~~~~-~~~~~~-~~~~~~~~  244 (281)
T 4dry_A          183 -------SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA---------RMSTG-VLQANG-EVAAEPTI  244 (281)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------------CE-EECTTS-CEEECCCB
T ss_pred             -------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh---------hhcch-hhhhhh-cccccCCC
Confidence                   1112335555444433       24899999999998765321         11111 000000 11122478


Q ss_pred             eHHHHHHHHHHHhcCCCc
Q 018900          270 HVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~  287 (349)
                      ..+|+|++++.++.++..
T Consensus       245 ~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          245 PIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             CHHHHHHHHHHHHHSCTT
T ss_pred             CHHHHHHHHHHHhCCCcc
Confidence            899999999999998765

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.41  E-value=4.1e-13  Score=121.75  Aligned_cols=183  Identities=15%  Similarity=0.075  Sum_probs=114.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+...++..    ...+.....+.++.+|   .+++++++
T Consensus        26 ~~~k~vlIT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~v~~~~   97 (286)
T 1xu9_A           26 LQGKKVIVT----GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVS----HCLELGAASAHYIAGTMEDMTFAEQFV   97 (286)
T ss_dssp             GTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998654322110    0000011235566676   45566555


Q ss_pred             cCC-----CccEEEeC-CCC-------------------ChhhHHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCC
Q 018900          149 GGV-----TFDVVLDN-NGK-------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       149 ~~~-----~~d~Vi~~-a~~-------------------~~~~~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      +..     ++|+|||+ ++.                   |+.++.++++++...   +.++||++||...+.....    
T Consensus        98 ~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  173 (286)
T 1xu9_A           98 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM----  173 (286)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT----
T ss_pred             HHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCC----
Confidence            422     47999999 452                   344555666655321   2369999999776543211    


Q ss_pred             CCCCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ...|..+|..++.+.+    +     .++++++++||.+..+.         ......+         .....+++.
T Consensus       174 ---~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~~~~~~  232 (286)
T 1xu9_A          174 ---VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---------AMKAVSG---------IVHMQAAPK  232 (286)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---------HHHHSCG---------GGGGGCBCH
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---------HHHhccc---------cccCCCCCH
Confidence               1112345655554432    2     37899999999886532         1111111         112346899


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +|+|+.++.+++.+..
T Consensus       233 ~~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          233 EECALEIIKGGALRQE  248 (286)
T ss_dssp             HHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHhcCCc
Confidence            9999999999987643

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.39  E-value=5.8e-13  Score=119.06  Aligned_cols=200  Identities=16%  Similarity=0.132  Sum_probs=117.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...+..       .++.  ...+.++.+|   +++++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (260)
T 2qq5_A            4 NGQVCVVT----GASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-------QEAQSLGGQCVPVVCDSSQESEVRSL   72 (260)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHHSSEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHHcCCceEEEECCCCCHHHHHHH
Confidence            46889999    99999999999999999999999999864332211       1111  1234556666   5555555


Q ss_pred             hcC------CCccEEEeCCCC---------------------------ChhhH----HHHHHHHHhCCCcEEEEeccccc
Q 018900          148 VGG------VTFDVVLDNNGK---------------------------NLDAV----RPVADWAKSSGVKQFLFISSAGI  190 (349)
Q Consensus       148 ~~~------~~~d~Vi~~a~~---------------------------~~~~~----~~ll~~a~~~gv~~~i~~Ss~~v  190 (349)
                      ++.      -++|++||+||.                           |+.++    +.++..+++.+..+||++||...
T Consensus        73 ~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  152 (260)
T 2qq5_A           73 FEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS  152 (260)
T ss_dssp             HHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGG
T ss_pred             HHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhh
Confidence            432      247999999931                           22333    33444555667789999999876


Q ss_pred             cCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCC
Q 018900          191 YKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGM  263 (349)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (349)
                      +...   +     ...|..+|.+++.+.+       ..|+++.+++||.+..+........   ............... 
T Consensus       153 ~~~~---~-----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~-  220 (260)
T 2qq5_A          153 LQYM---F-----NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAK---EEVLQDPVLKQFKSA-  220 (260)
T ss_dssp             TSCC---S-----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------------
T ss_pred             cCCC---C-----CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcc---ccccchhHHHHHHhh-
Confidence            5421   1     1123345666555443       2489999999999977643211000   000000000000000 


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc--cCCCEEEee
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNLV  296 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~--~~~~~~~i~  296 (349)
                       ...+...+|+|++++.++.++..  ..|+++.++
T Consensus       221 -~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          221 -FSSAETTELSGKCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             --CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             -hccCCCHHHHHHHHHHHhcCcccccccceeechh
Confidence             01135789999999999987642  244665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.37  E-value=1.8e-12  Score=125.00  Aligned_cols=197  Identities=14%  Similarity=0.133  Sum_probs=123.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .++++|||    ||+|.||.+++++|.++|++|++++|+..... +.       ......++.++.+|   .++++++++
T Consensus       212 ~gk~~LVT----GgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~-l~-------~~~~~~~~~~~~~Dvtd~~~v~~~~~  279 (454)
T 3u0b_A          212 DGKVAVVT----GAARGIGATIAEVFARDGATVVAIDVDGAAED-LK-------RVADKVGGTALTLDVTADDAVDKITA  279 (454)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH-HH-------HHHHHHTCEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEe----CCchHHHHHHHHHHHHCCCEEEEEeCCccHHH-HH-------HHHHHcCCeEEEEecCCHHHHHHHHH
Confidence            56899999    99999999999999999999999998642110 00       01111245566666   556665554


Q ss_pred             CC------CccEEEeCCCC--------------------ChhhHHHHHHHHHhC----CCcEEEEecccccc-CCCCCCC
Q 018900          150 GV------TFDVVLDNNGK--------------------NLDAVRPVADWAKSS----GVKQFLFISSAGIY-KPADEPP  198 (349)
Q Consensus       150 ~~------~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~----gv~~~i~~Ss~~vy-~~~~~~~  198 (349)
                      ..      ++|+|||+||.                    |+.++.++.+++...    +..+||++||...+ +....  
T Consensus       280 ~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~--  357 (454)
T 3u0b_A          280 HVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ--  357 (454)
T ss_dssp             HHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC--
T ss_pred             HHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC--
Confidence            32      38999999993                    567788888887765    56799999996543 32211  


Q ss_pred             CCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                            ..|..+|..++.+.+       ..|+++..++||.+..+..... ............+         ...+...
T Consensus       358 ------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---------l~r~g~p  421 (454)
T 3u0b_A          358 ------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRRLNS---------LFQGGQP  421 (454)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHHSBT---------TSSCBCH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHhhcc---------ccCCCCH
Confidence                  112234443333322       2389999999999977643211 0000000111111         1123578


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++..... .+|+++++.++.
T Consensus       422 edvA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          422 VDVAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             HHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            9999999999876543 467899998875

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.37  E-value=8.7e-12  Score=113.59  Aligned_cols=208  Identities=9%  Similarity=0.024  Sum_probs=122.4

Q ss_pred             cceEEEEEecCCCcc--cchHHHHHHHHHhCCCeEEEEEcC-----------CCCcccCCCCCCCc---ccceecCC---
Q 018900           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVG-----------DENSDKMKKPPFNR---FNEIVSAG---  133 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt--G~iG~~l~~~Ll~~g~~V~~l~R~-----------~~~~~~~~~~~~~~---~~~l~~~~---  133 (349)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+           .+..+++.......   .......+   
T Consensus         7 ~~k~~lVT----Gas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            7 RGKRAFIA----GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             TTCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CCCEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            46789999    999  999999999999999999999864           12221111000000   00000000   


Q ss_pred             -----CeEEEc--------ChhhHHhhhcCC-----CccEEEeCCCC----------------------ChhhHHHHHHH
Q 018900          134 -----GKTVWG--------DPAEVGNVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVADW  173 (349)
Q Consensus       134 -----~~~~~~--------D~~~l~~~~~~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~~  173 (349)
                           +..+..        |+++++++++..     ++|++||+||.                      |+.++.+++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 000000        123344443321     48999999972                      34566777777


Q ss_pred             HHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH--------hhCCcEEEEecCceeeCCCCCC-c
Q 018900          174 AKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSGNNKD-C  242 (349)
Q Consensus       174 a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~--------~~~~~~~ilR~~~v~g~~~~~~-~  242 (349)
                      +...  ...++|++||...+.....      ....|..+|.+++.+.+        +.|+++..++||++..+..... .
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~~------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~  236 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIPG------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTT------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             HHHHhccCceEEEEeccccccCCCC------cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc
Confidence            7543  1258999999765432111      00123446666544332        2589999999999998865432 1


Q ss_pred             hHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          243 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+...+....++         ..+.+.+|+|++++.++.+... ..|+++++.+|.
T Consensus       237 ~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          237 IDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            22333333332222         1246789999999999876433 356899999884

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.37  E-value=4.4e-13  Score=123.56  Aligned_cols=187  Identities=17%  Similarity=0.216  Sum_probs=114.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC---------CCcccCCCCCCCcccceecCC--CeEEEcCh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVSAG--GKTVWGDP  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~~~~~~~~~~~~~l~~~~--~~~~~~D~  141 (349)
                      ++|+||||    ||+|+||++++++|+++|++|++++|..         +..++.       ..++...+  +..+..|.
T Consensus         8 ~gk~~lVT----Gas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~-------~~~l~~~~~~~~~D~~~~   76 (319)
T 1gz6_A            8 DGRVVLVT----GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV-------VEEIRRRGGKAVANYDSV   76 (319)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHH-------HHHHHHTTCEEEEECCCG
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHH-------HHHHHhhCCeEEEeCCCH
Confidence            46899999    9999999999999999999999987642         111100       01121111  12344455


Q ss_pred             hhHHhhhc----CC-CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccc-ccc
Q 018900          142 AEVGNVVG----GV-TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSA-GIY  191 (349)
Q Consensus       142 ~~l~~~~~----~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~-~vy  191 (349)
                      +++.++++    .. ++|+|||+||.                    |+.++.+++++    +++.+..+||++||. +.+
T Consensus        77 ~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~  156 (319)
T 1gz6_A           77 EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  156 (319)
T ss_dssp             GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence            55544433    22 47999999983                    33444444444    466677899999996 455


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      +...        ...|..+|.+.+.+.+.       .|+++..++||.+ .+.... ..                  +..
T Consensus       157 ~~~~--------~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~-~~------------------~~~  208 (319)
T 1gz6_A          157 GNFG--------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET-VM------------------PED  208 (319)
T ss_dssp             CCTT--------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG-GS------------------CHH
T ss_pred             CCCC--------CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc-cC------------------Chh
Confidence            5321        11223456555444332       3899999999876 321110 00                  001


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  298 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~  298 (349)
                      ...+++.+|+|.+++.++..+....|++|++.+|
T Consensus       209 ~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          209 LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             hhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            1234688999999999998755445688887554

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.35  E-value=1.1e-12  Score=117.75  Aligned_cols=199  Identities=10%  Similarity=0.040  Sum_probs=122.2

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecCCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~  146 (349)
                      ++|+||||    ||  +|+||++++++|+++|++|++++|+.+.. +++..       ++ ..++.++.+|   ++++++
T Consensus         6 ~~k~vlVT----Ga~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~v~~   73 (269)
T 2h7i_A            6 DGKRILVS----GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-------RL-PAKAPLLELDVQNEEHLAS   73 (269)
T ss_dssp             TTCEEEEC----CCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-------TS-SSCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-------hc-CCCceEEEccCCCHHHHHH
Confidence            45789999    99  99999999999999999999999986431 21111       11 1245566666   566666


Q ss_pred             hhcCC--------CccEEEeCCCCC-------------------------hhhHHHHHHHHHhC--CCcEEEEecccccc
Q 018900          147 VVGGV--------TFDVVLDNNGKN-------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIY  191 (349)
Q Consensus       147 ~~~~~--------~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy  191 (349)
                      +++..        ++|+|||+||..                         +.++.++++++...  ...+||++||...+
T Consensus        74 ~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~  153 (269)
T 2h7i_A           74 LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR  153 (269)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS
T ss_pred             HHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc
Confidence            66532        589999999832                         23455666666442  12589999986643


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCC-------Cch----HHHHHHHHhC
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK-------DCE----EWFFDRIVRK  253 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~-------~~~----~~~~~~~~~~  253 (349)
                      +...        ...|..+|.+++.+.+.       .|+++..++||.+..+....       .-.    ..+.+.+...
T Consensus       154 ~~~~--------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (269)
T 2h7i_A          154 AMPA--------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR  225 (269)
T ss_dssp             CCTT--------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH
T ss_pred             ccCc--------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc
Confidence            2211        11122456655544332       38999999999886542100       000    0011111111


Q ss_pred             CCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       254 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .++.        +.+...+|+|++++.++.+... ..|+++.+.+|.
T Consensus       226 ~p~~--------rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          226 APIG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             CTTC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             CCcc--------cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            1111        1245679999999999986543 456899988874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.35  E-value=2.8e-12  Score=117.12  Aligned_cols=82  Identities=18%  Similarity=0.318  Sum_probs=56.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---h-hhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P-AEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~-~~l~~~~  148 (349)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+...+...    .+.+....++.++.+|   . ++++.++
T Consensus        11 ~~k~vlIT----Gas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A           11 KRRCAVVT----GGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE----KLKNSNHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             -CCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHTTTCCSEEEEECCTTSCHHHHHHHH
T ss_pred             CCcEEEEe----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----HHHhcCCCceEEEEccCCCcHHHHHHHH
Confidence            46889999    999999999999999999999999998754322110    0011111246667777   3 4455554


Q ss_pred             cCC-----CccEEEeCCCC
Q 018900          149 GGV-----TFDVVLDNNGK  162 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~  162 (349)
                      +..     ++|+|||+||.
T Consensus        83 ~~~~~~~g~iD~lv~nAg~  101 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGV  101 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCC
T ss_pred             HHHHHhCCCCCEEEECCcc
Confidence            422     48999999994

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.35  E-value=1.4e-11  Score=110.13  Aligned_cols=196  Identities=14%  Similarity=0.129  Sum_probs=120.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC--
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG--  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~--  150 (349)
                      ++|++|||    ||++.||++++++|.++|++|++.+|+.+...  ..       .+   .++.+..|+++++.+++.  
T Consensus        10 ~GK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--~~-------~~---~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A           10 RGKRALIT----AGTKGAGAATVSLFLELGAQVLTTARARPEGL--PE-------EL---FVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             TTCEEEES----CCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS--CT-------TT---EEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEe----ccCcHHHHHHHHHHHHcCCEEEEEECCchhCC--Cc-------EE---EEEcCCCCHHHHHHHHHHHH
Confidence            56899999    99999999999999999999999999764321  00       00   122223345555555432  


Q ss_pred             --C-CccEEEeCCCC----------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCC
Q 018900          151 --V-TFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (349)
Q Consensus       151 --~-~~d~Vi~~a~~----------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e  201 (349)
                        . ++|++||+||.                      |+.+    ++.++..+++.+-.++|++||...+...   |   
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~---~---  147 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL---P---  147 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---T---
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC---C---
Confidence              2 38999999983                      2223    4556666777777899999996532211   1   


Q ss_pred             CCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCC-------------chHHHHHHHHhCCCcccCCC
Q 018900          202 GDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKD-------------CEEWFFDRIVRKRPVPIPGS  261 (349)
Q Consensus       202 ~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  261 (349)
                      .....|..+|.+++.+.       ..+|+++..|.||.+--+.....             ....++.......|+     
T Consensus       148 ~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-----  222 (261)
T 4h15_A          148 ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-----  222 (261)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-----
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-----
Confidence            00111223455543332       23489999999998854321100             001111111122222     


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                          .-+...+|+|++++.++.+... .+|+++.+.+|-
T Consensus       223 ----gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          223 ----GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ----CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence                1245789999999999876544 467999998874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.35  E-value=9.8e-12  Score=110.44  Aligned_cols=201  Identities=13%  Similarity=0.115  Sum_probs=127.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~  147 (349)
                      ++|.+|||    ||++.||+.+++.|.++|.+|++++|+.+..++..       .++...  .+..+.+|   +++++++
T Consensus         6 ~gKvalVT----Gas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-------~~i~~~g~~~~~~~~Dvt~~~~v~~~   74 (254)
T 4fn4_A            6 KNKVVIVT----GAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-------QELRGMGKEVLGVKADVSKKKDVEEF   74 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            57899999    99999999999999999999999999876544321       222222  34455666   5666555


Q ss_pred             hcCC-----CccEEEeCCCC---------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||+||.                     |+.    .++.++..+++.+-.++|++||...+..... 
T Consensus        75 ~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~-  153 (254)
T 4fn4_A           75 VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA-  153 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS-
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC-
Confidence            5432     48999999983                     222    3566667777777789999999654321110 


Q ss_pred             CCCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          198 PHVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                            ...|..+|.++..+       +..+|+++..+.||.+--+.....  ......+...+..+  ..      ..+
T Consensus       154 ------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~------~R~  219 (254)
T 4fn4_A          154 ------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS--LS------SRL  219 (254)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT--TC------CCC
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC--CC------CCC
Confidence                  11122345443322       223489999999999876643221  11111222221111  00      123


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|.+++.++.+... ..|+++.+.+|-
T Consensus       220 g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          220 AEPEDIANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence            4689999999999987654 467999998874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.33  E-value=2.5e-13  Score=125.65  Aligned_cols=168  Identities=10%  Similarity=0.046  Sum_probs=105.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcCCC--CcccCCCCCCCcccceecCCCeE--EEcChh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKT--VWGDPA  142 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~~~--~~~~~~~~~~~~~~~l~~~~~~~--~~~D~~  142 (349)
                      +|||+||    ||+||+|++++..|+++|+       +|+++++...  ....       ...++.+..+.+  ...+.+
T Consensus         4 ~mkVlVt----GaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g-------~~~dl~~~~~~~~~di~~~~   72 (327)
T 1y7t_A            4 PVRVAVT----GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEG-------VVMELEDCAFPLLAGLEATD   72 (327)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHH-------HHHHHHTTTCTTEEEEEEES
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccc-------hhhhhhcccccccCCeEecc
Confidence            4789999    9999999999999999996       8999988631  1100       000111111111  112345


Q ss_pred             hHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC-Cc-EEEEecccc---ccCCCCCC-CCCCC
Q 018900          143 EVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFISSAG---IYKPADEP-PHVEG  202 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g-v~-~~i~~Ss~~---vy~~~~~~-~~~e~  202 (349)
                      ++.+++++.  |+|||+|+.              |+.+++++++++++.+ .+ +|+++|+..   .+-..... ++...
T Consensus        73 ~~~~a~~~~--D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~  150 (327)
T 1y7t_A           73 DPKVAFKDA--DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPR  150 (327)
T ss_dssp             CHHHHTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGG
T ss_pred             ChHHHhCCC--CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChh
Confidence            567777765  999999993              6788999999999875 54 788888743   11000000 11111


Q ss_pred             CCCCCCCChHHHHHHHH----hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcc
Q 018900          203 DVVKPDAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~  257 (349)
                      .  .+..+|...|++..    .+|++.+++|+.++||++... .++.|......|.++.
T Consensus       151 ~--~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~-~~~~~~~~~~~g~~l~  206 (327)
T 1y7t_A          151 N--FTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST-MFPDLFHAEVDGRPAL  206 (327)
T ss_dssp             G--EEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT-CEEECSSCEETTEEGG
T ss_pred             h--eeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe-EEEEeeeeeeCCeeHH
Confidence            1  13457887777553    459999999999999987643 3333333333444443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.32  E-value=2.1e-11  Score=108.71  Aligned_cols=203  Identities=13%  Similarity=0.057  Sum_probs=124.9

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||+|  .||+.++++|.++|++|++.+|+++..+++..    ...++...++..+.+|   ++++.++
T Consensus         5 ~gK~alVT----Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~   76 (256)
T 4fs3_A            5 ENKTYVIM----GIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEK----LLEQLNQPEAHLYQIDVQSDEEVING   76 (256)
T ss_dssp             TTCEEEEE----CCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HHGGGTCSSCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----HHHhcCCCcEEEEEccCCCHHHHHHH
Confidence            57899999    9887  89999999999999999999998755433211    1112223356666776   5555544


Q ss_pred             hcC----C-CccEEEeCCCCC------------------------hhhHHHHHHHHHhC--CCcEEEEeccccccCCCCC
Q 018900          148 VGG----V-TFDVVLDNNGKN------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       148 ~~~----~-~~d~Vi~~a~~~------------------------~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ++.    . ++|++||+++..                        +.+...+..++...  +-.++|++||........ 
T Consensus        77 ~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~-  155 (256)
T 4fs3_A           77 FEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ-  155 (256)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT-
T ss_pred             HHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc-
Confidence            432    2 379999999831                        11122223333222  235899999965322111 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                            ....|..+|.+++.+.       ..+|+++..|.||.+-.+..... ....+.+.+....|+..         +
T Consensus       156 ------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~  220 (256)
T 4fs3_A          156 ------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR---------N  220 (256)
T ss_dssp             ------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS---------C
T ss_pred             ------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC---------C
Confidence                  0111223455443322       23489999999999876543321 22344555555544432         3


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ...+|+|++++.++.+... ..|+++.+.+|-
T Consensus       221 g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          221 VDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence            4678999999999876544 467899998873

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.32  E-value=2.2e-12  Score=119.39  Aligned_cols=149  Identities=17%  Similarity=0.053  Sum_probs=99.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-----ecCCCeEEEcC---hhhHH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-----VSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~D---~~~l~  145 (349)
                      +++||||    ||+|+||++++++|+++|++|+++.|+.....+...    ....+     ...++.++.+|   .+++.
T Consensus         2 ~k~vlVT----Gas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   73 (327)
T 1jtv_A            2 RTVVLIT----GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR----LWEAARALACPPGSLETLQLDVRDSKSVA   73 (327)
T ss_dssp             CEEEEES----CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHH----HHHHHHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHH----HHHHhhhccCCCCceEEEEecCCCHHHHH
Confidence            5789999    999999999999999999999998887544332110    00000     01345666666   66677


Q ss_pred             hhhcCC---CccEEEeCCCC--------------------ChhhHHHHHHH----HHhCCCcEEEEeccccccCCCCCCC
Q 018900          146 NVVGGV---TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       146 ~~~~~~---~~d~Vi~~a~~--------------------~~~~~~~ll~~----a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++++..   ++|+|||+||.                    |+.++.+++++    +++.+..+||++||...+.....  
T Consensus        74 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~--  151 (327)
T 1jtv_A           74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF--  151 (327)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT--
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC--
Confidence            776653   48999999983                    34556666665    45567789999999765432110  


Q ss_pred             CCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCC
Q 018900          199 HVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSG  237 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~  237 (349)
                           ...|..+|.+++.+.+.       .|+++++++||.+..+.
T Consensus       152 -----~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          152 -----NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence                 11233456665554432       48999999999997764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.31  E-value=1.9e-11  Score=109.68  Aligned_cols=199  Identities=15%  Similarity=0.167  Sum_probs=125.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|.+|||    ||++.||+.+++.|.++|++|++.+|+.+..++..       .++ ...+..+.+|   +++++++++
T Consensus        28 ~gKvalVT----Gas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~-------~~~-g~~~~~~~~Dv~~~~~v~~~~~   95 (273)
T 4fgs_A           28 NAKIAVIT----GATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI-------AEI-GGGAVGIQADSANLAELDRLYE   95 (273)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHH-CTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHc-CCCeEEEEecCCCHHHHHHHHH
Confidence            56899999    99999999999999999999999999876554321       122 2234555666   566655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      ..     ++|++|++||.                    |+.++..+.+++...  +-.++|++||...+.....      
T Consensus        96 ~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~------  169 (273)
T 4fgs_A           96 KVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA------  169 (273)
T ss_dssp             HHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC------
Confidence            32     48999999993                    455565666655332  1247999999654322111      


Q ss_pred             CCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC------chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          203 DVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                       ...|..+|.++..+-+       .+|+++..|.||.+.-+.....      ....+.+.+....|+..         +.
T Consensus       170 -~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g  239 (273)
T 4fgs_A          170 -FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR---------VG  239 (273)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------CB
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------Cc
Confidence             1112234544433222       2389999999999876543211      11223344444444322         34


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+|+|.+++.++.+... ..|+++.+.+|.
T Consensus       240 ~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          240 RAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            678999999999977654 467899998874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.31  E-value=1.3e-12  Score=116.19  Aligned_cols=200  Identities=15%  Similarity=0.153  Sum_probs=124.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~  147 (349)
                      ++|.+|||    ||++.||+.+++.|.++|++|++.+|+.+..++..       .++...  ++..+.+|   +++++++
T Consensus         8 ~gKvalVT----Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-------~~l~~~g~~~~~~~~Dv~~~~~v~~~   76 (255)
T 4g81_D            8 TGKTALVT----GSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-------DTLTRKGYDAHGVAFDVTDELAIEAA   76 (255)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-------HHHHHTTCCEEECCCCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            57899999    99999999999999999999999999875443211       122222  23334444   5555554


Q ss_pred             hc----CC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHh-CCCcEEEEeccccccCCCCCC
Q 018900          148 VG----GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKS-SGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~----~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~-~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++    .. ++|++||+||.                    |+.+    ++.++..+++ .+-.++|++||...+..... 
T Consensus        77 ~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~-  155 (255)
T 4g81_D           77 FSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT-  155 (255)
T ss_dssp             HHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT-
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC-
Confidence            43    33 48999999993                    3344    4445555543 35579999999764332111 


Q ss_pred             CCCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                            ...|..+|.++..+       +..+|+++..+.||.+..+...... -..+.+.+....|+..         +.
T Consensus       156 ------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g  220 (255)
T 4g81_D          156 ------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR---------WG  220 (255)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS---------CB
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC---------Cc
Confidence                  11122345443332       2234899999999998765321100 0112223333333322         34


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+|+|.+++.++.+... ..|+++.+.+|-
T Consensus       221 ~pediA~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          221 RPEELIGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence            678999999998876544 467899998873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.28  E-value=4.2e-11  Score=105.59  Aligned_cols=197  Identities=18%  Similarity=0.221  Sum_probs=125.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~  147 (349)
                      ++|.+|||    ||++.||+.+++.|.++|.+|++.+|+.+..         ...++...  .+..+.+|   +++++++
T Consensus         8 ~GKvalVT----Gas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~---------~~~~~~~~g~~~~~~~~Dv~d~~~v~~~   74 (247)
T 4hp8_A            8 EGRKALVT----GANTGLGQAIAVGLAAAGAEVVCAARRAPDE---------TLDIIAKDGGNASALLIDFADPLAAKDS   74 (247)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHH---------HHHHHHHTTCCEEEEECCTTSTTTTTTS
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH---------HHHHHHHhCCcEEEEEccCCCHHHHHHH
Confidence            57899999    9999999999999999999999999975321         11122222  33445555   6667777


Q ss_pred             hcCCCccEEEeCCCC--------------------Chhh----HHHHHHHHHhCC-CcEEEEeccccccCCCCCCCCCCC
Q 018900          148 VGGVTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      +...++|++||+||.                    |+.+    ++.++..+++.+ -.++|++||...+.....      
T Consensus        75 ~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~------  148 (247)
T 4hp8_A           75 FTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR------  148 (247)
T ss_dssp             STTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS------
T ss_pred             HHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC------
Confidence            766679999999993                    3444    444455555444 479999999654322111      


Q ss_pred             CCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHHHH
Q 018900          203 DVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                       ...|..+|.++..+       +..+|+++..|.||.+--+...... -....+.+....|+..         +-..+|+
T Consensus       149 -~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peei  218 (247)
T 4hp8_A          149 -VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR---------WGHSEDI  218 (247)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS---------CBCTHHH
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC---------CcCHHHH
Confidence             11122344443322       2334899999999998655321100 0112233334443322         3457899


Q ss_pred             HHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          275 SSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       275 a~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      |.+++.++.+... ..|+++.+.+|
T Consensus       219 A~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          219 AGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhcCCcCCeEEECcc
Confidence            9999999877644 45689999887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.28  E-value=8.5e-11  Score=104.75  Aligned_cols=199  Identities=13%  Similarity=0.091  Sum_probs=124.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|.+|||    ||++.||+.+++.|.++|.+|++.+|+.+.....        .++.  ..++..+.+|   +++++++
T Consensus         6 ~gKvalVT----Gas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~--------~~~~~~~~~~~~~~~Dv~~~~~v~~~   73 (258)
T 4gkb_A            6 QDKVVIVT----GGASGIGGAISMRLAEERAIPVVFARHAPDGAFL--------DALAQRQPRATYLPVELQDDAQCRDA   73 (258)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH--------HHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH--------HHHHhcCCCEEEEEeecCCHHHHHHH
Confidence            57899999    9999999999999999999999999987543211        1111  2345566666   5555444


Q ss_pred             hcC----C-CccEEEeCCCC-------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGG----V-TFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~----~-~~d~Vi~~a~~-------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++.    . ++|++||+||.                   |+.+    ++.++..+++.+ .++|++||...+.....   
T Consensus        74 v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~---  149 (258)
T 4gkb_A           74 VAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGN---  149 (258)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSS---
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCC---
Confidence            432    2 38999999994                   2333    444555555544 68999999764322111   


Q ss_pred             CCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccCCCCCccee
Q 018900          200 VEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                          ...|..+|.++..+       +..+|+++..+.||.+.-+.....     ........+....|+-        ..
T Consensus       150 ----~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg--------~R  217 (258)
T 4gkb_A          150 ----TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG--------RR  217 (258)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT--------TS
T ss_pred             ----chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC--------CC
Confidence                11122345443332       233489999999999876643221     0111223333333321        12


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +...+|+|.+++.++.+... ..|+++.+.+|.
T Consensus       218 ~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          218 FTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence            45689999999999876644 467999998874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.25  E-value=8.3e-12  Score=111.40  Aligned_cols=197  Identities=14%  Similarity=0.056  Sum_probs=115.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHh---CCCeEEEEEcCCCCcccCCCCCCCccccee----cCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~  141 (349)
                      .++|+||||    ||+|+||++++++|++   +|++|++++|+.+...++.       .++.    ...+.++.+|   +
T Consensus         4 l~~k~~lVT----Gas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dv~~~   72 (259)
T 1oaa_A            4 LGCAVCVLT----GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-------EELGAQQPDLKVVLAAADLGTE   72 (259)
T ss_dssp             CBSEEEEES----SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-------HHHHHHCTTSEEEEEECCTTSH
T ss_pred             CCCcEEEEe----CCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHH-------HHHHhhCCCCeEEEEecCCCCH
Confidence            356899999    9999999999999999   8999999999864432211       1111    1235566666   5


Q ss_pred             hhHHhhhcCC-------Ccc--EEEeCCCCC-----------------------hhhHHHHHHHHHh----C--CCcEEE
Q 018900          142 AEVGNVVGGV-------TFD--VVLDNNGKN-----------------------LDAVRPVADWAKS----S--GVKQFL  183 (349)
Q Consensus       142 ~~l~~~~~~~-------~~d--~Vi~~a~~~-----------------------~~~~~~ll~~a~~----~--gv~~~i  183 (349)
                      ++++++++..       ++|  +|||+||..                       +.++.++++++..    .  +..+||
T Consensus        73 ~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv  152 (259)
T 1oaa_A           73 AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVV  152 (259)
T ss_dssp             HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEE
T ss_pred             HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEE
Confidence            5555554321       367  999999841                       2234455565533    2  346899


Q ss_pred             EeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----h-CCcEEEEecCceeeCCCCCCchHHHHHHHHh-C-CC-
Q 018900          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----N-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-K-RP-  255 (349)
Q Consensus       184 ~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~----~-~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~-~-~~-  255 (349)
                      ++||...+.....       ...|..+|.+++.+.+.    . ++++..++||.+-.+.         ...... . .+ 
T Consensus       153 ~isS~~~~~~~~~-------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~---------~~~~~~~~~~~~  216 (259)
T 1oaa_A          153 NISSLCALQPYKG-------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM---------QQLARETSKDPE  216 (259)
T ss_dssp             EECCGGGTSCCTT-------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH---------HHHHHHHCSCHH
T ss_pred             EEcCchhcCCCCC-------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch---------HHHHhhccCChh
Confidence            9999876543211       11123456555554433    2 4778888898774431         111110 0 00 


Q ss_pred             -cccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          256 -VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       256 -~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                       ...+........+.+.+|+|++++.++.+.....|+.+++
T Consensus       217 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          217 LRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             HHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence             0000000001235789999999999987543344566654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.25  E-value=8.4e-11  Score=114.25  Aligned_cols=186  Identities=16%  Similarity=0.172  Sum_probs=121.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      ++++||||    ||+|.||.+++++|.++|+ .|+++.|.........    ....++..  ..+.++.+|   .+++.+
T Consensus       238 ~~~~vLIT----GgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~----~l~~~l~~~g~~v~~~~~Dvtd~~~v~~  309 (496)
T 3mje_A          238 VHGSVLVT----GGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAA----ELRAELEQLGVRVTIAACDAADREALAA  309 (496)
T ss_dssp             CCSEEEEE----TCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHH----HHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHH----HHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            45899999    9999999999999999998 7888888643221100    00112222  235566666   667777


Q ss_pred             hhcCC----CccEEEeCCCC---------------------ChhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCC
Q 018900          147 VVGGV----TFDVVLDNNGK---------------------NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHV  200 (349)
Q Consensus       147 ~~~~~----~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~  200 (349)
                      +++..    ++|.|||+||.                     |+.++.++.++++..+..+||++||.. ++|....    
T Consensus       310 ~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~----  385 (496)
T 3mje_A          310 LLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQ----  385 (496)
T ss_dssp             HHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTC----
T ss_pred             HHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCc----
Confidence            76543    58999999983                     567899999999988889999999954 4443221    


Q ss_pred             CCCCCCCCCChHHHHHHHH---hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS---ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~---~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                          ..|..+|..++.+.+   ..|++++.|.||.+.+.+....  ......+.+.           ....+..++.+++
T Consensus       386 ----~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~--~~~~~~l~~~-----------g~~~l~pe~~~~~  448 (496)
T 3mje_A          386 ----PGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD--PEVHDRLVRQ-----------GVLAMEPEHALGA  448 (496)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC--------CHHHHHT-----------TEEEECHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccC--hHHHHHHHhc-----------CCCCCCHHHHHHH
Confidence                112233444444333   3499999999999877654321  0011111111           1345788999999


Q ss_pred             HHHHhcCCCc
Q 018900          278 LTLAVENPEA  287 (349)
Q Consensus       278 ~~~~~~~~~~  287 (349)
                      +..++..+..
T Consensus       449 l~~~l~~~~~  458 (496)
T 3mje_A          449 LDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHTCS
T ss_pred             HHHHHcCCCc
Confidence            9999987654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.15  E-value=8.3e-11  Score=117.63  Aligned_cols=215  Identities=14%  Similarity=0.147  Sum_probs=122.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCC-CCC-CcccceecCC--CeEEEcChhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-PPF-NRFNEIVSAG--GKTVWGDPAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~-~~~-~~~~~l~~~~--~~~~~~D~~~l~~~  147 (349)
                      .++|.||||    ||+|.||++++++|+++|++|++++|+......-.. ... ....++...+  +..+..|.++++++
T Consensus        17 l~gk~~lVT----Gas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~   92 (613)
T 3oml_A           17 YDGRVAVVT----GAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKV   92 (613)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHH
Confidence            357899999    999999999999999999999999883211000000 000 0011222222  22333456666666


Q ss_pred             hcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHH----HhCCCcEEEEecccc-ccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a----~~~gv~~~i~~Ss~~-vy~~~~~~  197 (349)
                      ++..     ++|++||+||.                    |+.++.++++++    ++.+..+||++||.. .++.... 
T Consensus        93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~-  171 (613)
T 3oml_A           93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ-  171 (613)
T ss_dssp             HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTC-
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCC-
Confidence            6543     48999999993                    344555555544    777778999999964 4443211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                             ..|..+|.+++.+.+       ..|+.+..+.||.+- +.             ..+..      .......+.
T Consensus       172 -------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~-------------~~~~~------~~~~~~~~~  224 (613)
T 3oml_A          172 -------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RM-------------TEGIL------PDILFNELK  224 (613)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------CCCC------CHHHHTTCC
T ss_pred             -------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hh-------------hhhcc------chhhhhcCC
Confidence                   112234555443332       238899999998531 11             11100      001122357


Q ss_pred             HHHHHHHHHHHhcCCCccCCCEEEeeCC--------------------CccCHHHHHHHHHHHhCCCc
Q 018900          271 VRDLSSMLTLAVENPEAASSNIFNLVSD--------------------RAVTLDGMAKLCAQAAGLPV  318 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~~~~~~~~i~~~--------------------~~~t~~el~~~~~~~~g~~~  318 (349)
                      .+|+|.+++.++.+....+|+++++.+|                    ...+.+++.+.+.++.....
T Consensus       225 pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~  292 (613)
T 3oml_A          225 PKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSK  292 (613)
T ss_dssp             GGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTT
T ss_pred             HHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhcccc
Confidence            8999999999988774455678776643                    12577778888888776543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.14  E-value=3.4e-10  Score=103.94  Aligned_cols=204  Identities=11%  Similarity=0.044  Sum_probs=116.0

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCC-----------CCcccCCCCCCCcccceecCCCeEEEc
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD-----------ENSDKMKKPPFNRFNEIVSAGGKTVWG  139 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~  139 (349)
                      ++|++|||    ||  +|.||++++++|+++|++|++++|++           +...+.........    ...+.++.+
T Consensus         8 ~gk~~lVT----Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   79 (315)
T 2o2s_A            8 RGQTAFVA----GVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSL----IEFAGVYPL   79 (315)
T ss_dssp             TTCEEEEE----CCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCB----CCCSCEEEC
T ss_pred             CCCEEEEe----CCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccc----ccccccccc
Confidence            45789999    99  89999999999999999999998742           11111000000000    000111111


Q ss_pred             -----------------------ChhhHHhhhcCC-----CccEEEeCCCC----------------------ChhhHHH
Q 018900          140 -----------------------DPAEVGNVVGGV-----TFDVVLDNNGK----------------------NLDAVRP  169 (349)
Q Consensus       140 -----------------------D~~~l~~~~~~~-----~~d~Vi~~a~~----------------------~~~~~~~  169 (349)
                                             |.++++.+++..     ++|++||+||.                      |+.++.+
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence                                   123444444322     48999999973                      2345566


Q ss_pred             HHHHHHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHH-------H-hhCCcEEEEecCceeeCCCC
Q 018900          170 VADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-------S-ENFSNWASFRPQYMIGSGNN  239 (349)
Q Consensus       170 ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~-------~-~~~~~~~ilR~~~v~g~~~~  239 (349)
                      +++++...  .-.+||++||...+.....      ....|..+|.+++.+.       . ..|+++..++||.+..+...
T Consensus       160 l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  233 (315)
T 2o2s_A          160 LLQHFGPIMNEGGSAVTLSYLAAERVVPG------YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAAS  233 (315)
T ss_dssp             HHHHHSTTEEEEEEEEEEEEGGGTSCCTT------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHH
T ss_pred             HHHHHHHHHhcCCEEEEEecccccccCCC------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhh
Confidence            66666433  1258999999765432111      0012334666654433       2 25899999999988653100


Q ss_pred             -------CCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          240 -------KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       240 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                             ......+...+....++         ..+...+|+|++++.++..... .+|+++.+.+|.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          234 AIGKSGEKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HTTCSSSSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hccccccchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence                   00111111111111111         1245789999999999976433 456899998875

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.11  E-value=2.7e-10  Score=104.76  Aligned_cols=213  Identities=10%  Similarity=0.008  Sum_probs=105.8

Q ss_pred             cceEEEEEecCCCc--ccchHHHHHHHHHhCCCeEEEEEcCC-----------CCcccCCCCCC----CcccceecCC--
Q 018900           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD-----------ENSDKMKKPPF----NRFNEIVSAG--  133 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg--tG~iG~~l~~~Ll~~g~~V~~l~R~~-----------~~~~~~~~~~~----~~~~~l~~~~--  133 (349)
                      ++|++|||    ||  +|.||++++++|+++|++|++++|++           +...+......    ....++...+  
T Consensus         8 ~~k~~lVT----Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            8 RGKTAFVA----GVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             TTCEEEEE----CCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             CCCEEEEe----CCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            35789999    98  89999999999999999999998642           11111000000    0001111100  


Q ss_pred             ---CeEEEcC-----------------------hhhHHhhhcCC-----CccEEEeCCCC--------------------
Q 018900          134 ---GKTVWGD-----------------------PAEVGNVVGGV-----TFDVVLDNNGK--------------------  162 (349)
Q Consensus       134 ---~~~~~~D-----------------------~~~l~~~~~~~-----~~d~Vi~~a~~--------------------  162 (349)
                         ..++..|                       .++++++++..     ++|++||+||.                    
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence               1222222                       22444444322     48999999862                    


Q ss_pred             --ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHH-------H-hhCCcEEEEec
Q 018900          163 --NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-------S-ENFSNWASFRP  230 (349)
Q Consensus       163 --~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~-------~-~~~~~~~ilR~  230 (349)
                        |+.++.++++++...  .-.+||++||...+.....      ....|..+|.+++.+.       . ..|+++..++|
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG------YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             hHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc------cchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence              345566777766543  1268999999764432111      0012445666644432       2 25899999999


Q ss_pred             CceeeCCCCCCc---hHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          231 QYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       231 ~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      |.+..+......   ...+......     ..........+...+|+|++++.++.+... .+|+++.+.+|..
T Consensus       238 G~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          238 GPLKSRAASAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             CCCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             CCccChhhhhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            998765322100   0000000000     000000112356889999999999986433 4568999988853

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.07  E-value=9.8e-10  Score=107.75  Aligned_cols=206  Identities=14%  Similarity=0.127  Sum_probs=123.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEE-EcCCCCccc-CC----CCCC-Ccccceec--CCCeEEEcC--
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIM-TVGDENSDK-MK----KPPF-NRFNEIVS--AGGKTVWGD--  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l-~R~~~~~~~-~~----~~~~-~~~~~l~~--~~~~~~~~D--  140 (349)
                      .+++||||    ||+|.||.+++++|.++|++ |+++ .|+.....+ ..    .... ....++..  ..+.++.+|  
T Consensus       250 ~~~~vLIT----GgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          250 ADGTVLVT----GAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT  325 (525)
T ss_dssp             TTSEEEES----STTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence            46789999    99999999999999999998 5555 676422000 00    0000 00112222  235566666  


Q ss_pred             -hhhHHhhhcCC----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCC-----CcEEEEeccccc
Q 018900          141 -PAEVGNVVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG-----VKQFLFISSAGI  190 (349)
Q Consensus       141 -~~~l~~~~~~~----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~g-----v~~~i~~Ss~~v  190 (349)
                       .+++.+++...    ++|.|||+||.                    |+.++.++.+++....     ..+||++||+..
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence             66777777654    48999999993                    5677888888887765     679999999653


Q ss_pred             -cCCCCCCCCCCCCCCCCCCChHHHHHHHHh---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          191 -YKPADEPPHVEGDVVKPDAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       191 -y~~~~~~~~~e~~~~~~~~~k~~~ek~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                       +|....        ..|..+|..++.+..+   .|++++.|.||.+ +.+....  ......+...      |     .
T Consensus       406 ~~g~~g~--------~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~--~~~~~~~~~~------g-----~  463 (525)
T 3qp9_A          406 IWGGAGQ--------GAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTE--GATGERLRRL------G-----L  463 (525)
T ss_dssp             TTCCTTC--------HHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGS--SHHHHHHHHT------T-----B
T ss_pred             cCCCCCC--------HHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccc--hhhHHHHHhc------C-----C
Confidence             332211        1112234444444333   3899999999998 3221101  0111112111      1     2


Q ss_pred             eeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHH
Q 018900          267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA  311 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~  311 (349)
                      ..+..+++++++..++..+..   . ..+.   .+.|..+...+.
T Consensus       464 ~~l~pee~a~~l~~~l~~~~~---~-v~v~---~~dw~~~~~~~~  501 (525)
T 3qp9_A          464 RPLAPATALTALDTALGHGDT---A-VTIA---DVDWSSFAPGFT  501 (525)
T ss_dssp             CCBCHHHHHHHHHHHHHHTCS---E-EEEC---CBCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhCCCC---e-EEEE---eCCHHHHHhhcc
Confidence            347899999999999987643   2 2222   256777666554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.03  E-value=5.7e-10  Score=86.58  Aligned_cols=95  Identities=24%  Similarity=0.238  Sum_probs=74.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++++|+|+    |+ |++|+.+++.|++.| ++|++++|+++....           +...+++.+.+|   .+++.+++
T Consensus         4 ~~~~v~I~----G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~   67 (118)
T 3ic5_A            4 MRWNICVV----GA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-----------LNRMGVATKQVDAKDEAGLAKAL   67 (118)
T ss_dssp             TCEEEEEE----CC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-----------HHTTTCEEEECCTTCHHHHHHHT
T ss_pred             CcCeEEEE----CC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-----------HHhCCCcEEEecCCCHHHHHHHH
Confidence            57899999    99 999999999999999 999999998754432           123355666666   56777777


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+  +|+|||+++.  ....++++++.+.|+++|.+.++
T Consensus        68 ~~--~d~vi~~~~~--~~~~~~~~~~~~~g~~~~~~~~~  102 (118)
T 3ic5_A           68 GG--FDAVISAAPF--FLTPIIAKAAKAAGAHYFDLTED  102 (118)
T ss_dssp             TT--CSEEEECSCG--GGHHHHHHHHHHTTCEEECCCSC
T ss_pred             cC--CCEEEECCCc--hhhHHHHHHHHHhCCCEEEecCc
Confidence            65  5999999974  45689999999999876665443

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.98  E-value=1.7e-09  Score=99.86  Aligned_cols=206  Identities=7%  Similarity=0.007  Sum_probs=116.0

Q ss_pred             ceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCC---------CCcccCCCCCCCcccceecCCCeEEEcC--
Q 018900           74 KKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVSAGGKTVWGD--  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~D--  140 (349)
                      +|.+|||    ||++  .||++++++|+++|++|++.+|++         +...........  ..-....+.++.+|  
T Consensus         2 ~k~~lIT----Gas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~   75 (329)
T 3lt0_A            2 EDICFIA----GIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIID--KDKKMNILDMLPFDAS   75 (329)
T ss_dssp             CCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCS--SSCBCCEEEEEECCTT
T ss_pred             CcEEEEE----CCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHh--hccccccccccccccc
Confidence            5789999    9875  999999999999999999776543         111111000000  00000112334444  


Q ss_pred             -h--h------------------hHHhhhcCC-----CccEEEeCCCC----------------------ChhhHHHHHH
Q 018900          141 -P--A------------------EVGNVVGGV-----TFDVVLDNNGK----------------------NLDAVRPVAD  172 (349)
Q Consensus       141 -~--~------------------~l~~~~~~~-----~~d~Vi~~a~~----------------------~~~~~~~ll~  172 (349)
                       .  +                  ++.++++..     ++|++||+||.                      |+.++..+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             1  3                  444444332     48999999983                      3445556666


Q ss_pred             HHHhCC--CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHH-------Hh-hCCcEEEEecCceeeCCCCCC-
Q 018900          173 WAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-------SE-NFSNWASFRPQYMIGSGNNKD-  241 (349)
Q Consensus       173 ~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~-------~~-~~~~~~ilR~~~v~g~~~~~~-  241 (349)
                      ++...=  -.++|++||...+.....      ....|..+|.+++.+.       .. .++++..+.||.+..+..... 
T Consensus       156 ~~~p~m~~~g~Iv~isS~~~~~~~~~------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~  229 (329)
T 3lt0_A          156 YFVNIMKPQSSIISLTYHASQKVVPG------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTT------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC
T ss_pred             HHHHHHhhCCeEEEEeCccccCCCCc------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhh
Confidence            554321  158999999764332111      0012334565544332       33 689999999998864321100 


Q ss_pred             -------------------------------------------chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          242 -------------------------------------------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       242 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                                                                 +...+...+....++         ..+...+|+|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peevA~~v  300 (329)
T 3lt0_A          230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL---------RQKLLSTDIGSVA  300 (329)
T ss_dssp             ------------------------------------------CHHHHHHHHHHHHSSS---------CSCCCHHHHHHHH
T ss_pred             hhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcc---------cCcCCHHHHHHHH
Confidence                                                       000011111111111         1245789999999


Q ss_pred             HHHhcCCCc-cCCCEEEeeCCCc
Q 018900          279 TLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       279 ~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +.++.+... .+|+++.+.+|..
T Consensus       301 ~fL~s~~a~~itG~~i~vdGG~~  323 (329)
T 3lt0_A          301 SFLLSRESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhCchhccccCcEEEEcCCee
Confidence            999976533 4678999998853

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.87  E-value=2.2e-08  Score=99.86  Aligned_cols=205  Identities=18%  Similarity=0.205  Sum_probs=127.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCC--CeEEEcCh-hhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGDP-AEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~D~-~~l~~~~  148 (349)
                      .++|.+|||    ||++.||+.++++|.++|++|++.+|...  ++       ...++...+  +..+.+|. ++.++++
T Consensus       320 l~gkvalVT----Gas~GIG~a~A~~la~~Ga~Vv~~~~~~~--~~-------~~~~i~~~g~~~~~~~~Dv~~~~~~~~  386 (604)
T 2et6_A          320 LKDKVVLIT----GAGAGLGKEYAKWFAKYGAKVVVNDFKDA--TK-------TVDEIKAAGGEAWPDQHDVAKDSEAII  386 (604)
T ss_dssp             CTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEECSSCC--HH-------HHHHHHHTTCEEEEECCCHHHHHHHHH
T ss_pred             cCCCeEEEE----CcchHHHHHHHHHHHHCCCEEEEEeCccH--HH-------HHHHHHhcCCeEEEEEcChHHHHHHHH
Confidence            346889999    99999999999999999999999886321  11       011222112  33455676 4444433


Q ss_pred             c----CC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEecccc-ccCCCCCCC
Q 018900          149 G----GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAG-IYKPADEPP  198 (349)
Q Consensus       149 ~----~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~  198 (349)
                      +    .. ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||.. .++...   
T Consensus       387 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~---  463 (604)
T 2et6_A          387 KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG---  463 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT---
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC---
Confidence            2    22 38999999993                    2333    45555666666667999999964 333211   


Q ss_pred             CCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.++..+       +..+|+++..|.||.  ...    +.    ...... .         .......
T Consensus       464 -----~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~--~T~----m~----~~~~~~-~---------~~~~~~p  518 (604)
T 2et6_A          464 -----QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA--ETA----MT----LSIMRE-Q---------DKNLYHA  518 (604)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC--CCC----C-----------------------CCSSCG
T ss_pred             -----ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC--CCc----cc----cccCch-h---------hccCCCH
Confidence                 11223345443332       223489999999983  211    11    111000 0         0123478


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCC-----------------CccCHHHHHHHHHHHhCCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSD-----------------RAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~-----------------~~~t~~el~~~~~~~~g~~  317 (349)
                      +|+|.+++.++.......|+++.+.+|                 ..++..++.+.+.++...+
T Consensus       519 e~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          519 DQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             GGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            999999998887654455688877665                 3478999999999988765

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.80  E-value=1.7e-08  Score=100.63  Aligned_cols=205  Identities=15%  Similarity=0.253  Sum_probs=123.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC---------CCcccCCCCCCCcccceecCC--CeEEEcCh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVSAG--GKTVWGDP  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~---------~~~~~~~~~~~~~~~~l~~~~--~~~~~~D~  141 (349)
                      ++|.+|||    ||++.||+.++++|.++|++|++.+|+.         +..++.       ..++...+  ...+..|.
T Consensus         7 ~gkvalVT----Gas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~-------~~~i~~~g~~~~~d~~d~   75 (604)
T 2et6_A            7 KDKVVIIT----GAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVV-------VDEIVKNGGVAVADYNNV   75 (604)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHH-------HHHHHHTTCEEEEECCCT
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHH-------HHHHHhcCCeEEEEcCCH
Confidence            46789999    9999999999999999999999998754         111110       11222112  22344454


Q ss_pred             hhHHhhh----cCC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEecccc-cc
Q 018900          142 AEVGNVV----GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAG-IY  191 (349)
Q Consensus       142 ~~l~~~~----~~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~-vy  191 (349)
                      +++++++    +.. ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||.. .+
T Consensus        76 ~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           76 LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             TCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            4333333    222 37999999993                    2333    44555566666667999999954 44


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          192 KPADEPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      +....        ..|..+|.++..+.       ..+|+++..|.|+. .     ..    +....   .+-       .
T Consensus       156 ~~~~~--------~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~-----T~----m~~~~---~~~-------~  207 (604)
T 2et6_A          156 GNFGQ--------ANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-R-----SR----MTESI---MPP-------P  207 (604)
T ss_dssp             CCTTB--------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-C-----CH----HHHTT---SCH-------H
T ss_pred             CCCCc--------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-c-----Cc----ccccc---CCh-------h
Confidence            42211        11233454433322       23489999999962 1     11    11110   000       0


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCC------------------CccCHHHHHHHHHHHhCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD------------------RAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~------------------~~~t~~el~~~~~~~~g~  316 (349)
                      .......+|+|.+++.++.......|+++.+.+|                  ..++..++.+.+.++...
T Consensus       208 ~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          208 MLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             HHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             hhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            1123578999999999998764445677777654                  346889999988887654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.66  E-value=1.8e-07  Score=96.11  Aligned_cols=181  Identities=15%  Similarity=0.189  Sum_probs=114.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHH-hCCC-eEEEEEcCCCCcccCCCCCCCcccceecCC--CeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll-~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~D---~~~l~  145 (349)
                      +++.+|||    ||+|.||+.++++|. ++|. +|++++|+....++..    ....++...+  +.++.+|   .++++
T Consensus       529 ~~~~~lIt----Gg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~----~~~~~l~~~G~~v~~~~~Dvsd~~~v~  600 (795)
T 3slk_A          529 AAGTVLVT----GGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAA----ELVAQLTAYGAEVSLQACDVADRETLA  600 (795)
T ss_dssp             TTSEEEEE----TTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHH----HHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             cccceeec----cCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHH----HHHHHHHhcCCcEEEEEeecCCHHHHH
Confidence            46789999    999999999999999 7898 5889999843222110    0112232223  4556666   66677


Q ss_pred             hhhcCC----CccEEEeCCC--------------------CChhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCC
Q 018900          146 NVVGGV----TFDVVLDNNG--------------------KNLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHV  200 (349)
Q Consensus       146 ~~~~~~----~~d~Vi~~a~--------------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~  200 (349)
                      ++++..    ++|.|||+||                    .|+.++.++.+++.. .. +||++||+. ..|....    
T Consensus       601 ~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~----  674 (795)
T 3slk_A          601 KVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQ----  674 (795)
T ss_dssp             HHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSC----
T ss_pred             HHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCC----
Confidence            666544    5899999999                    367788898888732 33 899999964 4443221    


Q ss_pred             CCCCCCCCCChHHHHHHH--------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYI--------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~--------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                               .-|.+.|.+        +..|++++.|.||.+-.++............+.+..           ...+..+
T Consensus       675 ---------~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~  734 (795)
T 3slk_A          675 ---------GNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTE  734 (795)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHH
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHH
Confidence                     344444422        234999999999987654321110011111111111           2236778


Q ss_pred             HHHHHHHHHhcCCCc
Q 018900          273 DLSSMLTLAVENPEA  287 (349)
Q Consensus       273 Dva~~~~~~~~~~~~  287 (349)
                      +....+..++..+..
T Consensus       735 e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          735 EGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhCCCc
Confidence            888888888877654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.65  E-value=1e-07  Score=76.30  Aligned_cols=97  Identities=21%  Similarity=0.289  Sum_probs=70.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhh-h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-V  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~-~  148 (349)
                      ++++|+|+    |+ |.+|+.+++.|.+.|++|++++|+++..+.+.           ..+..++.+|.   +.+.++ +
T Consensus         5 ~~~~v~I~----G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-----------~~~~~~~~~d~~~~~~l~~~~~   68 (144)
T 2hmt_A            5 KNKQFAVI----GL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-----------SYATHAVIANATEENELLSLGI   68 (144)
T ss_dssp             -CCSEEEE----CC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-----------TTCSEEEECCTTCHHHHHTTTG
T ss_pred             cCCcEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HhCCEEEEeCCCCHHHHHhcCC
Confidence            45689999    97 99999999999999999999999765443222           12344556663   444443 3


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+  .|+||++.+.+......+++.+++.+.+++|..++
T Consensus        69 ~~--~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           69 RN--FEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             GG--CSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CC--CCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence            33  69999999977666667888889888877775554

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.59  E-value=1.8e-08  Score=106.54  Aligned_cols=209  Identities=12%  Similarity=0.026  Sum_probs=115.5

Q ss_pred             cceEEEEEecCCCcccc-hHHHHHHHHHhCCCeEEEEE-cCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      ++++||||    ||+|. ||++++++|+++|++|++++ |+.+...+......   .++.  ...+.++.+|   .++++
T Consensus       475 ~GKvALVT----GASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~---ael~a~Ga~V~vV~~DVTD~esVe  547 (1688)
T 2pff_A          475 KDKYVLIT----GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIY---AKYGAKGSTLIVVPFNQGSKQDVE  547 (1688)
T ss_dssp             CSCCEEEC----SCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTT---TTTCCTTCEEEEEECCSSSTTHHH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHH---HHhhcCCCeEEEEEeCCCCHHHHH
Confidence            45789999    99998 99999999999999999984 55443322110000   0111  1134455666   55555


Q ss_pred             hhhc----C-----C--CccEEEeCCCCC-----------------------hhhHHHHHHHHHh------CCCcEEEEe
Q 018900          146 NVVG----G-----V--TFDVVLDNNGKN-----------------------LDAVRPVADWAKS------SGVKQFLFI  185 (349)
Q Consensus       146 ~~~~----~-----~--~~d~Vi~~a~~~-----------------------~~~~~~ll~~a~~------~gv~~~i~~  185 (349)
                      ++++    .     .  ++|+|||+||..                       +.++..++++++.      .+-.+||++
T Consensus       548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnI  627 (1688)
T 2pff_A          548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  627 (1688)
T ss_dssp             HHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCC
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEE
Confidence            5543    2     2  489999999841                       2233345555422      122589999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH----h-h--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCccc
Q 018900          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E-N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI  258 (349)
Q Consensus       186 Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~-~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~  258 (349)
                      ||...+..         ....|..+|.+++.+..    + .  .+++..+.||++.+......  ..........     
T Consensus       628 SSiAG~~G---------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~--~e~~~~~l~~-----  691 (1688)
T 2pff_A          628 SPNHGTFG---------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA--NNIIAEGIEK-----  691 (1688)
T ss_dssp             CSCTTTSS---------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT--TTTCSTTTSS-----
T ss_pred             EChHhccC---------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC--chHHHHHHHh-----
Confidence            99643211         11234456766666521    1 1  26677888888874321110  0000000000     


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCCC-c-cCCCEEEee--CCC--ccCHHHHHHH
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENPE-A-ASSNIFNLV--SDR--AVTLDGMAKL  309 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~-~~~~~~~i~--~~~--~~t~~el~~~  309 (349)
                           ....+...+|+|++++.++.... . ..|+.+.+.  +|.  ...+.++...
T Consensus       692 -----iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~  743 (1688)
T 2pff_A          692 -----MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK  743 (1688)
T ss_dssp             -----SSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHH
T ss_pred             -----CCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHH
Confidence                 01123478999999999998762 1 234666653  442  2345555443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.59  E-value=1.1e-07  Score=103.52  Aligned_cols=207  Identities=13%  Similarity=0.034  Sum_probs=117.9

Q ss_pred             cceEEEEEecCCCcccc-hHHHHHHHHHhCCCeEEEEE-cCCCCcccCCCCCCCcc-ccee--cCCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRF-NEIV--SAGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~-~~l~--~~~~~~~~~D---~~~l  144 (349)
                      +++.||||    ||+|. ||.++++.|+++|++|++++ |+.+...+...    .+ .++.  ...+.++.+|   .+++
T Consensus       674 ~gKvaLVT----GASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~----eL~~~~~~~g~~v~~v~~DVsd~~sV  745 (1887)
T 2uv8_A          674 KDKYVLIT----GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQ----SIYAKYGAKGSTLIVVPFNQGSKQDV  745 (1887)
T ss_dssp             TTCEEEEE----SCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH----HHHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHH----HHHHHhhcCCCeEEEEEecCCCHHHH
Confidence            46789999    99998 99999999999999999984 55433221100    00 0111  1234556666   5555


Q ss_pred             Hhhhc----C-----C--CccEEEeCCCCC-----------------------hhhHHHHHHHHHhCC------CcEEEE
Q 018900          145 GNVVG----G-----V--TFDVVLDNNGKN-----------------------LDAVRPVADWAKSSG------VKQFLF  184 (349)
Q Consensus       145 ~~~~~----~-----~--~~d~Vi~~a~~~-----------------------~~~~~~ll~~a~~~g------v~~~i~  184 (349)
                      +.++.    .     .  ++|+|||+||..                       +.++..++++++...      -.+||+
T Consensus       746 ~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVn  825 (1887)
T 2uv8_A          746 EALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP  825 (1887)
T ss_dssp             HHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEE
T ss_pred             HHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEE
Confidence            55543    2     2  489999999842                       122334555553222      258999


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCChHHHHHH----HH-hh--CCcEEEEecCceeeCCC-C-CCchHHHHHHHHhCCC
Q 018900          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY----IS-EN--FSNWASFRPQYMIGSGN-N-KDCEEWFFDRIVRKRP  255 (349)
Q Consensus       185 ~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~----~~-~~--~~~~~ilR~~~v~g~~~-~-~~~~~~~~~~~~~~~~  255 (349)
                      +||...+..         ....|..+|.+++.+    +. +.  .+++..+.||++.+... . ...    ........+
T Consensus       826 ISS~ag~~g---------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~p  892 (1887)
T 2uv8_A          826 MSPNHGTFG---------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNI----IAEGIEKMG  892 (1887)
T ss_dssp             ECSCTTCSS---------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCT----THHHHHTTS
T ss_pred             EcChHhccC---------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchh----HHHHHHhcC
Confidence            999653221         112344566666665    11 22  27889999999984221 1 011    111112111


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCC-C-ccCCCEEEee--CCC--ccCHHHHHHHH
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLV--SDR--AVTLDGMAKLC  310 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~-~~~~~~~~i~--~~~--~~t~~el~~~~  310 (349)
                      +          .+...+|+|++++.++... . ...|+.+.+.  +|.  ...+.++...+
T Consensus       893 l----------r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~l  943 (1887)
T 2uv8_A          893 V----------RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL  943 (1887)
T ss_dssp             C----------CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHH
T ss_pred             C----------CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHH
Confidence            1          2348899999999998765 1 1234667663  442  23455555443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.55  E-value=1.2e-07  Score=87.36  Aligned_cols=100  Identities=17%  Similarity=0.179  Sum_probs=72.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEE-EcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTV-WGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~-~~D~~~l~~~  147 (349)
                      ++|||+||    ||+|++|..++..|+.+|  ++|++++++++...         ..++.+.  ...+. ..+..++.++
T Consensus         7 ~~mKI~Vi----GAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~---------~~dL~~~~~~~~v~~~~~t~d~~~a   73 (326)
T 1smk_A            7 PGFKVAIL----GAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV---------TADISHMDTGAVVRGFLGQQQLEAA   73 (326)
T ss_dssp             -CEEEEEE----TTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHH---------HHHHHTSCSSCEEEEEESHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhH---------HHHhhcccccceEEEEeCCCCHHHH
Confidence            46799999    999999999999999998  89999997664110         0011110  11111 1245677788


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +++.  |+|||+++.              |+..++++++++++.+.+.+|+++|
T Consensus        74 l~ga--DvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           74 LTGM--DLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             HTTC--SEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             cCCC--CEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            8886  999999983              4578999999999988777887776

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.52  E-value=2.2e-07  Score=101.11  Aligned_cols=210  Identities=15%  Similarity=0.054  Sum_probs=117.3

Q ss_pred             cceEEEEEecCCCcccc-hHHHHHHHHHhCCCeEEEEE-cCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      ++++||||    ||+|. ||.+++++|+++|++|++++ |+.+...+....   -..++.  ...+.++.+|   .+++.
T Consensus       651 ~gKvaLVT----GASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~e---L~~el~~~G~~v~~v~~DVsd~esV~  723 (1878)
T 2uv9_A          651 QGKHALMT----GAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQG---IYARCGARGSQLVVVPFNQGSKQDVE  723 (1878)
T ss_dssp             TTCEEEEE----SCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH---HHHHHCCTTCEEEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHH---HHHHhhccCCeEEEEEcCCCCHHHHH
Confidence            45789999    99999 99999999999999999986 444322110000   001111  1234556666   55555


Q ss_pred             hhhc----C---C--CccEEEeCCCCC-----------------------hhhHHHHHHHHH---h---CCCcEEEEecc
Q 018900          146 NVVG----G---V--TFDVVLDNNGKN-----------------------LDAVRPVADWAK---S---SGVKQFLFISS  187 (349)
Q Consensus       146 ~~~~----~---~--~~d~Vi~~a~~~-----------------------~~~~~~ll~~a~---~---~gv~~~i~~Ss  187 (349)
                      .++.    .   .  ++|+|||+||..                       +.++.+++++++   .   .+..+||++||
T Consensus       724 alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS  803 (1878)
T 2uv9_A          724 ALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP  803 (1878)
T ss_dssp             HHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred             HHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence            5543    2   2  489999999842                       112233333321   1   12358999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCChHHHHHHHH----h-h--CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCC
Q 018900          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E-N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~----~-~--~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  260 (349)
                      ...+..         ....|..+|.+++.+..    + .  .+++..+.||++-|......  ...........++    
T Consensus       804 ~ag~~g---------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~--~~~~~~~~~~~pl----  868 (1878)
T 2uv9_A          804 NHGTFG---------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA--NNLVAEGVEKLGV----  868 (1878)
T ss_dssp             CSSSSS---------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH--HHHTHHHHHTTTC----
T ss_pred             hhhccC---------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc--chhhHHHHHhcCC----
Confidence            643211         01234446666555432    1 1  37889999998863221111  0111122222111    


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCC--ccCCCEEEee--CCC--ccCHHHHHHHH
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPE--AASSNIFNLV--SDR--AVTLDGMAKLC  310 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~~~~i~--~~~--~~t~~el~~~~  310 (349)
                            .+...+|+|++++.++....  ...|+.+.+.  +|.  ...+.++...+
T Consensus       869 ------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          869 ------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             ------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             ------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence                  23478999999999887653  2345777663  442  24566655443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.45  E-value=3.5e-07  Score=73.30  Aligned_cols=94  Identities=15%  Similarity=0.150  Sum_probs=68.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +|++|+|+    |+ |++|+.+++.|.++|++|++++++++..+           .+...++.++.+|   ++.+.++ .
T Consensus         5 ~~~~v~I~----G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~-----------~~~~~~~~~~~gd~~~~~~l~~~-~   67 (141)
T 3llv_A            5 GRYEYIVI----GS-EAAGVGLVRELTAAGKKVLAVDKSKEKIE-----------LLEDEGFDAVIADPTDESFYRSL-D   67 (141)
T ss_dssp             -CCSEEEE----CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHH-----------HHHHTTCEEEECCTTCHHHHHHS-C
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCeEEEEECCHHHHH-----------HHHHCCCcEEECCCCCHHHHHhC-C
Confidence            46789999    76 99999999999999999999999875432           2334467778887   3445544 1


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      -.+.|+||.+.+ +......++..+++.+..++|-
T Consensus        68 ~~~~d~vi~~~~-~~~~n~~~~~~a~~~~~~~iia  101 (141)
T 3llv_A           68 LEGVSAVLITGS-DDEFNLKILKALRSVSDVYAIV  101 (141)
T ss_dssp             CTTCSEEEECCS-CHHHHHHHHHHHHHHCCCCEEE
T ss_pred             cccCCEEEEecC-CHHHHHHHHHHHHHhCCceEEE
Confidence            123699999888 5566667777888877555553

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.30  E-value=2e-06  Score=68.26  Aligned_cols=94  Identities=19%  Similarity=0.309  Sum_probs=65.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcCh---hhHHhh-h
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDP---AEVGNV-V  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~---~~l~~~-~  148 (349)
                      +|+|+|+    |+ |++|+.+++.|.+.|++|++++|+++..+           .+.. .++.++.+|.   +.+.+. +
T Consensus         4 ~m~i~Ii----G~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~-----------~~~~~~~~~~~~~d~~~~~~l~~~~~   67 (140)
T 1lss_A            4 GMYIIIA----GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-----------KASAEIDALVINGDCTKIKTLEDAGI   67 (140)
T ss_dssp             -CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-----------HHHHHCSSEEEESCTTSHHHHHHTTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-----------HHHHhcCcEEEEcCCCCHHHHHHcCc
Confidence            4789999    86 99999999999999999999999764332           1111 2556666764   333332 3


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .+  .|+||++.+.+ .....+.+.++..+.+++|...
T Consensus        68 ~~--~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           68 ED--ADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             TT--CSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEEC
T ss_pred             cc--CCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEe
Confidence            33  69999998754 3334567788888877777543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.28  E-value=5.2e-07  Score=83.12  Aligned_cols=102  Identities=12%  Similarity=0.091  Sum_probs=70.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-------eEEEEEcC----CCCcccCCCCCCCcccceecC--CCeEEEc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVG----DENSDKMKKPPFNRFNEIVSA--GGKTVWG  139 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-------~V~~l~R~----~~~~~~~~~~~~~~~~~l~~~--~~~~~~~  139 (349)
                      +++||+||    ||+|++|++++..|+.+|+       +|++++++    .+....       ...++.+.  .+.....
T Consensus         4 ~~~KI~Vi----GaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g-------~~~dl~~~~~~~~~~i~   72 (329)
T 1b8p_A            4 TPMRVAVT----GAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQG-------VMMEIDDCAFPLLAGMT   72 (329)
T ss_dssp             CCEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHH-------HHHHHHTTTCTTEEEEE
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchh-------hHHHHhhhcccccCcEE
Confidence            35799999    9999999999999999885       89998887    321110       00011110  0111111


Q ss_pred             ChhhHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCC-Cc-EEEEecc
Q 018900          140 DPAEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-VK-QFLFISS  187 (349)
Q Consensus       140 D~~~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~g-v~-~~i~~Ss  187 (349)
                      +..++.+++++.  |+|||+++.              |+..++++++++++.+ .+ +||++|.
T Consensus        73 ~~~~~~~al~~a--D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           73 AHADPMTAFKDA--DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             EESSHHHHTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EecCcHHHhCCC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            235677778776  999999993              4567899999998874 54 8999886

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.19  E-value=6.1e-07  Score=82.08  Aligned_cols=104  Identities=15%  Similarity=0.133  Sum_probs=68.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEc--CCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTV--GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      |||+||    ||+|++|+.++..|+.+|+  +++.+++  +.+........ ......+....+++..+ .+++.+.+++
T Consensus         1 mKI~V~----GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~d-l~~~~~~~~~~~~i~~~-~d~l~~al~g   74 (313)
T 1hye_A            1 MKVTII----GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRED-IYDALAGTRSDANIYVE-SDENLRIIDE   74 (313)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHH-HHHHHTTSCCCCEEEEE-ETTCGGGGTT
T ss_pred             CEEEEE----CCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHH-HHHhHHhcCCCeEEEeC-CcchHHHhCC
Confidence            589999    9999999999999999885  6777887  43211100000 00000000012232221 2236667877


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .  |+|||+|+.              |+..++++++++++.+ +++|+++|
T Consensus        75 a--D~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           75 S--DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             C--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             C--CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence            6  999999983              5778999999999998 88888776

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.16  E-value=5.7e-06  Score=79.37  Aligned_cols=92  Identities=22%  Similarity=0.219  Sum_probs=66.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++++|+|+    | +|++|+++++.|++.|++|++.+|+.+..+++....         .++..+.+|   .+++.+++.
T Consensus         2 ~~k~VlVi----G-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---------~~~~~~~~Dv~d~~~l~~~l~   67 (450)
T 1ff9_A            2 ATKSVLML----G-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------QHSTPISLDVNDDAALDAEVA   67 (450)
T ss_dssp             CCCEEEEE----C-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---------TTEEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---------CCceEEEeecCCHHHHHHHHc
Confidence            36789999    8 799999999999999999999999875554332211         123344445   567778886


Q ss_pred             CCCccEEEeCCCCCh----------------------hhHHHHHHHHHhCCCc
Q 018900          150 GVTFDVVLDNNGKNL----------------------DAVRPVADWAKSSGVK  180 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~----------------------~~~~~ll~~a~~~gv~  180 (349)
                      +  +|+|||+++...                      ....+++++|+++|++
T Consensus        68 ~--~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           68 K--HDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             T--SSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             C--CcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            5  599999998421                      2467888889988874

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.15  E-value=3.7e-05  Score=62.42  Aligned_cols=96  Identities=19%  Similarity=0.234  Sum_probs=67.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhh-h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-V  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~-~  148 (349)
                      ..++|+|+    |+ |.+|..+++.|.+.|++|++++|+++....+..          ..+..++.+|.   +.+.++ +
T Consensus        18 ~~~~v~Ii----G~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~   82 (155)
T 2g1u_A           18 KSKYIVIF----GC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGM   82 (155)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTG
T ss_pred             CCCcEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCc
Confidence            46789999    75 999999999999999999999998765543220          22455666663   334433 3


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHh-CCCcEEEEec
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFIS  186 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~-~gv~~~i~~S  186 (349)
                      .+  .|+||.+.+.+ .....+++.++. .+..++|...
T Consensus        83 ~~--ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~  118 (155)
T 2g1u_A           83 EK--ADMVFAFTNDD-STNFFISMNARYMFNVENVIARV  118 (155)
T ss_dssp             GG--CSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred             cc--CCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEE
Confidence            33  59999988743 445566777777 6766666544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.13  E-value=2.5e-06  Score=79.71  Aligned_cols=96  Identities=25%  Similarity=0.190  Sum_probs=68.1

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .+.+|||+|+    |+ |++|+.+++.|.+ .++|++.+|+.+..+++....         ..+.++..|.+.+.+++++
T Consensus        13 ~g~~mkilvl----Ga-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~---------~~~~~d~~d~~~l~~~~~~   77 (365)
T 3abi_A           13 EGRHMKVLIL----GA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA---------TPLKVDASNFDKLVEVMKE   77 (365)
T ss_dssp             ---CCEEEEE----CC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS---------EEEECCTTCHHHHHHHHTT
T ss_pred             cCCccEEEEE----CC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC---------CcEEEecCCHHHHHHHHhC
Confidence            3456789999    98 9999999998854 589999999875554332110         0122233457889999887


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .  |+||++++..+  ...++++|.++|+ ++|=+|
T Consensus        78 ~--DvVi~~~p~~~--~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           78 F--ELVIGALPGFL--GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             C--SEEEECCCGGG--HHHHHHHHHHHTC-EEEECC
T ss_pred             C--CEEEEecCCcc--cchHHHHHHhcCc-ceEeee
Confidence            6  99999998764  4578899999886 666544

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.13  E-value=1.2e-06  Score=79.73  Aligned_cols=96  Identities=16%  Similarity=0.179  Sum_probs=67.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEc--CCCCcccCCCCCCCccccee-----cCCCeEEEcChhhHH
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTV--GDENSDKMKKPPFNRFNEIV-----SAGGKTVWGDPAEVG  145 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R--~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~D~~~l~  145 (349)
                      |||+||    ||+|++|+.++..|+.+|+  +++.+++  +.+..+..       ..++.     ..++++..+|    .
T Consensus         1 mKI~Ii----GAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~-------~~dl~~~~~~~~~~~v~~~~----~   65 (303)
T 1o6z_A            1 TKVSVV----GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQ-------AADTNHGIAYDSNTRVRQGG----Y   65 (303)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHH-------HHHHHHHHTTTCCCEEEECC----G
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHH-------HHHHHHHHhhCCCcEEEeCC----H
Confidence            589999    9999999999999998876  6887877  43221110       01111     1233433332    3


Q ss_pred             hhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          146 NVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +.+++.  |+|||+++.              |+..++++++++++.+.+.+|+++|
T Consensus        66 ~a~~~a--DvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           66 EDTAGS--DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             GGGTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             HHhCCC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            446665  999999983              4578999999999998878888776

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.10  E-value=2.7e-06  Score=80.28  Aligned_cols=86  Identities=19%  Similarity=0.199  Sum_probs=55.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCC-CC---Ccc-cceecC--CCeEEEcC---h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKP-PF---NRF-NEIVSA--GGKTVWGD---P  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~-~~---~~~-~~l~~~--~~~~~~~D---~  141 (349)
                      .+|++|||    ||++.||+++++.|.+ +|++|++++|+.+...+.... .+   ..+ .++...  .+..+.+|   .
T Consensus        60 ~gKvaLVT----GASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVI----GASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCH
Confidence            47899999    9999999999999999 999999999987544321000 00   000 111222  23455666   4


Q ss_pred             hhHHhhh----cCC--CccEEEeCCCC
Q 018900          142 AEVGNVV----GGV--TFDVVLDNNGK  162 (349)
Q Consensus       142 ~~l~~~~----~~~--~~d~Vi~~a~~  162 (349)
                      +++++++    +..  ++|++||+||.
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4444443    232  48999999875

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.09  E-value=5.5e-06  Score=67.29  Aligned_cols=94  Identities=13%  Similarity=0.197  Sum_probs=65.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh-h
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-V  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~-~  148 (349)
                      .++|+|+    |+ |.+|+.+++.|.+.|++|++++|+. +..+.        +.+....++.++.+|   ++.+.++ +
T Consensus         3 ~~~vlI~----G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~--------~~~~~~~~~~~i~gd~~~~~~l~~a~i   69 (153)
T 1id1_A            3 KDHFIVC----GH-SILAINTILQLNQRGQNVTVISNLPEDDIKQ--------LEQRLGDNADVIPGDSNDSSVLKKAGI   69 (153)
T ss_dssp             CSCEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHH--------HHHHHCTTCEEEESCTTSHHHHHHHTT
T ss_pred             CCcEEEE----CC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHH--------HHHhhcCCCeEEEcCCCCHHHHHHcCh
Confidence            4689999    75 9999999999999999999999974 21111        111223467888888   4555554 5


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEE
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i  183 (349)
                      .+  .|+||-+.+.+ .....+...+++. +..++|
T Consensus        70 ~~--ad~vi~~~~~d-~~n~~~~~~a~~~~~~~~ii  102 (153)
T 1id1_A           70 DR--CRAILALSDND-ADNAFVVLSAKDMSSDVKTV  102 (153)
T ss_dssp             TT--CSEEEECSSCH-HHHHHHHHHHHHHTSSSCEE
T ss_pred             hh--CCEEEEecCCh-HHHHHHHHHHHHHCCCCEEE
Confidence            55  49999887754 4445556667765 655665

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.09  E-value=2.9e-06  Score=80.43  Aligned_cols=93  Identities=16%  Similarity=0.139  Sum_probs=69.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC---CeEEEEEcCCCCcccCCCCCCCcccceec---CCCeEEEcC---hhhH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVS---AGGKTVWGD---PAEV  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~D---~~~l  144 (349)
                      |++|+|+    |+ |++|+.+++.|.+.|   .+|++.+|+.+..+++.       .++..   .++..+..|   .+++
T Consensus         1 M~kVlIi----Ga-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la-------~~l~~~~~~~~~~~~~D~~d~~~l   68 (405)
T 4ina_A            1 MAKVLQI----GA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA-------QSIKAKGYGEIDITTVDADSIEEL   68 (405)
T ss_dssp             -CEEEEE----CC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH-------HHHHHTTCCCCEEEECCTTCHHHH
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH-------HHhhhhcCCceEEEEecCCCHHHH
Confidence            5789999    98 999999999999998   38999999876544321       11111   235555555   6788


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      ++++++.++|+|||+++...  ...++++|.+.|+.
T Consensus        69 ~~~l~~~~~DvVin~ag~~~--~~~v~~a~l~~g~~  102 (405)
T 4ina_A           69 VALINEVKPQIVLNIALPYQ--DLTIMEACLRTGVP  102 (405)
T ss_dssp             HHHHHHHCCSEEEECSCGGG--HHHHHHHHHHHTCC
T ss_pred             HHHHHhhCCCEEEECCCccc--ChHHHHHHHHhCCC
Confidence            88888756799999999654  46888899888874

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.06  E-value=1.2e-05  Score=69.59  Aligned_cols=72  Identities=18%  Similarity=0.242  Sum_probs=50.4

Q ss_pred             cceEEEEEecCCCc----------------ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE
Q 018900           73 EKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~  136 (349)
                      .+|+||||    ||                +|.+|.+++++|+.+|++|+.+.|.......            ...++++
T Consensus         2 ~gk~vlVT----gG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------------~~~~~~~   65 (232)
T 2gk4_A            2 NAMKILVT----SGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------------PHPNLSI   65 (232)
T ss_dssp             -CCEEEEE----CSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------------CCTTEEE
T ss_pred             CCCEEEEe----CCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------------CCCCeEE
Confidence            47899999    99                9999999999999999999999997532110            0124444


Q ss_pred             EEcC-h----hhHHhhhcCCCccEEEeCCCC
Q 018900          137 VWGD-P----AEVGNVVGGVTFDVVLDNNGK  162 (349)
Q Consensus       137 ~~~D-~----~~l~~~~~~~~~d~Vi~~a~~  162 (349)
                      +..+ .    +.+.+.+..  .|++||+|++
T Consensus        66 ~~v~s~~em~~~v~~~~~~--~Dili~aAAv   94 (232)
T 2gk4_A           66 REITNTKDLLIEMQERVQD--YQVLIHSMAV   94 (232)
T ss_dssp             EECCSHHHHHHHHHHHGGG--CSEEEECSBC
T ss_pred             EEHhHHHHHHHHHHHhcCC--CCEEEEcCcc
Confidence            4443 2    233333333  6999999995

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.96  E-value=6.8e-06  Score=76.90  Aligned_cols=87  Identities=14%  Similarity=0.111  Sum_probs=55.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCC-CCC---CCccc-ceec--CCCeEEEcC---
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMK-KPP---FNRFN-EIVS--AGGKTVWGD---  140 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~-~~~---~~~~~-~l~~--~~~~~~~~D---  140 (349)
                      ..+|++|||    ||++.||.++++.|.+ +|++|++++|+.+...+.. ...   ...+. ++..  ..+..+.+|   
T Consensus        45 ~~gKvaLVT----Gas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           45 NGPKRVLVI----GASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             TCCSEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCCCEEEEe----CcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            347899999    9999999999999999 9999999998765432100 000   00001 1111  123455666   


Q ss_pred             hhhHHhhhcC----C-CccEEEeCCCC
Q 018900          141 PAEVGNVVGG----V-TFDVVLDNNGK  162 (349)
Q Consensus       141 ~~~l~~~~~~----~-~~d~Vi~~a~~  162 (349)
                      .++++++++.    . ++|++||+||.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            4555544432    2 38999999875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.93  E-value=1.1e-05  Score=76.31  Aligned_cols=87  Identities=18%  Similarity=0.178  Sum_probs=55.6

Q ss_pred             ccceEEEEEecCCCcccchHHH--HHHHHHhCCCeEEEEEcCCCCcccCCCC-C---CCcccce-e--cCCCeEEEcC--
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFY--LAKELLGSGHEVTIMTVGDENSDKMKKP-P---FNRFNEI-V--SAGGKTVWGD--  140 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~--l~~~Ll~~g~~V~~l~R~~~~~~~~~~~-~---~~~~~~l-~--~~~~~~~~~D--  140 (349)
                      ..+|++|||    ||++.||..  ++++|.++|++|++++|+.......... .   ...+.++ .  ...+..+.+|  
T Consensus        58 ~~gK~aLVT----GassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           58 RGPKKVLIV----GASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCSEEEEE----SCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            357899999    999999999  9999999999999999976443210000 0   0011111 1  1234556666  


Q ss_pred             -hhhHHhhhc----CC-CccEEEeCCCC
Q 018900          141 -PAEVGNVVG----GV-TFDVVLDNNGK  162 (349)
Q Consensus       141 -~~~l~~~~~----~~-~~d~Vi~~a~~  162 (349)
                       .++++++++    .. ++|++||+||.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence             444444433    22 48999999885

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.93  E-value=7.1e-06  Score=73.95  Aligned_cols=79  Identities=19%  Similarity=0.255  Sum_probs=56.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEE---EcChhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTV---WGDPAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~---~~D~~~l~~~  147 (349)
                      .++++||||    ||+|.+|++++++|+++|++|++++|+.+..+++.       .++.. .++.++   ..|.+++.++
T Consensus       117 l~gk~vlVt----GaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~-------~~~~~~~~~~~~~~D~~~~~~~~~~  185 (287)
T 1lu9_A          117 VKGKKAVVL----AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA-------DSVNKRFKVNVTAAETADDASRAEA  185 (287)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-------HHHHHHHTCCCEEEECCSHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEecCCCHHHHHHH
Confidence            356899999    99999999999999999999999999864433211       01100 123333   3456778888


Q ss_pred             hcCCCccEEEeCCCCC
Q 018900          148 VGGVTFDVVLDNNGKN  163 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~  163 (349)
                      ++..  |+|||+++..
T Consensus       186 ~~~~--DvlVn~ag~g  199 (287)
T 1lu9_A          186 VKGA--HFVFTAGAIG  199 (287)
T ss_dssp             TTTC--SEEEECCCTT
T ss_pred             HHhC--CEEEECCCcc
Confidence            8764  9999999853

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.89  E-value=4.4e-05  Score=60.91  Aligned_cols=92  Identities=16%  Similarity=0.221  Sum_probs=63.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhh-h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-V  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~-~  148 (349)
                      ++++|+|+    | .|.+|..+++.|.+.|++|++++++++..+           .+...++.++.+|.   +.+.++ +
T Consensus         6 ~~~~viIi----G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~-----------~~~~~g~~~i~gd~~~~~~l~~a~i   69 (140)
T 3fwz_A            6 ICNHALLV----G-YGRVGSLLGEKLLASDIPLVVIETSRTRVD-----------ELRERGVRAVLGNAANEEIMQLAHL   69 (140)
T ss_dssp             CCSCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESCHHHHH-----------HHHHTTCEEEESCTTSHHHHHHTTG
T ss_pred             CCCCEEEE----C-cCHHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHHcCCCEEECCCCCHHHHHhcCc
Confidence            46789999    6 599999999999999999999999875442           33345788888884   344443 2


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEE
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i  183 (349)
                      .+  .|+||-+.+.+... ..++..+++. +..++|
T Consensus        70 ~~--ad~vi~~~~~~~~n-~~~~~~a~~~~~~~~ii  102 (140)
T 3fwz_A           70 EC--AKWLILTIPNGYEA-GEIVASARAKNPDIEII  102 (140)
T ss_dssp             GG--CSEEEECCSCHHHH-HHHHHHHHHHCSSSEEE
T ss_pred             cc--CCEEEEECCChHHH-HHHHHHHHHHCCCCeEE
Confidence            23  59999888755333 3344555554 344555

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.84  E-value=2e-05  Score=67.90  Aligned_cols=91  Identities=25%  Similarity=0.352  Sum_probs=64.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhh-hc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV-VG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~-~~  149 (349)
                      |+|+|+    |+ |.+|+.+++.|.++|++|++++++++...           .+. ..++.++.+|   .+.+.++ +.
T Consensus         1 M~iiIi----G~-G~~G~~la~~L~~~g~~v~vid~~~~~~~-----------~l~~~~~~~~i~gd~~~~~~l~~a~i~   64 (218)
T 3l4b_C            1 MKVIII----GG-ETTAYYLARSMLSRKYGVVIINKDRELCE-----------EFAKKLKATIIHGDGSHKEILRDAEVS   64 (218)
T ss_dssp             CCEEEE----CC-HHHHHHHHHHHHHTTCCEEEEESCHHHHH-----------HHHHHSSSEEEESCTTSHHHHHHHTCC
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-----------HHHHHcCCeEEEcCCCCHHHHHhcCcc
Confidence            579999    75 99999999999999999999999875443           211 1367788888   4445554 34


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHh-CCCcEEEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLF  184 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~-~gv~~~i~  184 (349)
                      +  .|+||-+.+.+. ....+...+++ .+..++|-
T Consensus        65 ~--ad~vi~~~~~d~-~n~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           65 K--NDVVVILTPRDE-VNLFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             T--TCEEEECCSCHH-HHHHHHHHHHHTSCCCEEEE
T ss_pred             c--CCEEEEecCCcH-HHHHHHHHHHHHcCCCeEEE
Confidence            4  599998877553 33445556665 67777763

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.84  E-value=3.9e-05  Score=87.49  Aligned_cols=146  Identities=12%  Similarity=0.069  Sum_probs=90.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccceecCC--CeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAG--GKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~D---~~~l~~  146 (349)
                      .++.+|||    ||+|.||+.+++.|.++|++ |++++|+........    ....++...+  +.++.+|   .+++++
T Consensus      1883 ~~k~~lIT----Ggs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~----~~~~~l~~~g~~v~~~~~Dvsd~~~v~~ 1954 (2512)
T 2vz8_A         1883 PHKSYVIT----GGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQA----RQVREWRRQGVQVLVSTSNASSLDGARS 1954 (2512)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHH----HHHHHHHHTTCEEEEECCCSSSHHHHHH
T ss_pred             CCCEEEEE----CCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHH----HHHHHHHhCCCEEEEEecCCCCHHHHHH
Confidence            56789999    99999999999999999997 777888764332100    0011222222  3445555   555555


Q ss_pred             hhcCC----CccEEEeCCC--------------------CChhhHHHHHHHHHhC--CCcEEEEecccc-ccCCCCCCCC
Q 018900          147 VVGGV----TFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAG-IYKPADEPPH  199 (349)
Q Consensus       147 ~~~~~----~~d~Vi~~a~--------------------~~~~~~~~ll~~a~~~--gv~~~i~~Ss~~-vy~~~~~~~~  199 (349)
                      +++..    ++|.|||+||                    .|+.++.++.+++...  ...+||++||.. ..|....   
T Consensus      1955 ~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~--- 2031 (2512)
T 2vz8_A         1955 LITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ--- 2031 (2512)
T ss_dssp             HHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC---
T ss_pred             HHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc---
Confidence            54322    4899999999                    2577888887766543  236999999964 3332211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH---hhCCcEEEEecCcee
Q 018900          200 VEGDVVKPDAGHVQVEKYIS---ENFSNWASFRPQYMI  234 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~---~~~~~~~ilR~~~v~  234 (349)
                           ..|..+|..++.+.+   ..|++...+-.+.+-
T Consensus      2032 -----~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2032 -----ANYGFANSAMERICEKRRHDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBC
T ss_pred             -----HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcC
Confidence                 112234444443333   348887777766543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.81  E-value=5.3e-05  Score=63.21  Aligned_cols=92  Identities=20%  Similarity=0.197  Sum_probs=66.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhh-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~-  147 (349)
                      .+++|+|+    | .|.+|..+++.|.+. |++|++++|+++..+           .+...+++++.+|.   +.+.++ 
T Consensus        38 ~~~~v~Ii----G-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~-----------~~~~~g~~~~~gd~~~~~~l~~~~  101 (183)
T 3c85_A           38 GHAQVLIL----G-MGRIGTGAYDELRARYGKISLGIEIREEAAQ-----------QHRSEGRNVISGDATDPDFWERIL  101 (183)
T ss_dssp             TTCSEEEE----C-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHH-----------HHHHTTCCEEECCTTCHHHHHTBC
T ss_pred             CCCcEEEE----C-CCHHHHHHHHHHHhccCCeEEEEECCHHHHH-----------HHHHCCCCEEEcCCCCHHHHHhcc
Confidence            46789999    7 699999999999999 999999999875432           23344677787774   334444 


Q ss_pred             -hcCCCccEEEeCCCCChhhHHHHHHHHHhCC-CcEEE
Q 018900          148 -VGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFL  183 (349)
Q Consensus       148 -~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~g-v~~~i  183 (349)
                       +.+  .|+||.+.+. ......++..++..+ ..++|
T Consensus       102 ~~~~--ad~vi~~~~~-~~~~~~~~~~~~~~~~~~~ii  136 (183)
T 3c85_A          102 DTGH--VKLVLLAMPH-HQGNQTALEQLQRRNYKGQIA  136 (183)
T ss_dssp             SCCC--CCEEEECCSS-HHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCC--CCEEEEeCCC-hHHHHHHHHHHHHHCCCCEEE
Confidence             333  5999987764 455566777888877 44555

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.79  E-value=9.5e-06  Score=68.71  Aligned_cols=98  Identities=16%  Similarity=0.210  Sum_probs=64.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe--EEEcCh---hhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGDP---AEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~D~---~~l~~~  147 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+....           .+.+  +...+.   +.+.+.
T Consensus        38 ~g~~vlV~----Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-----------~g~~~~~d~~~~~~~~~~~~~  102 (198)
T 1pqw_A           38 PGERVLIH----SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-----------LGVEYVGDSRSVDFADEILEL  102 (198)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-----------TCCSEEEETTCSTHHHHHHHH
T ss_pred             CCCEEEEe----eCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCCEEeeCCcHHHHHHHHHH
Confidence            46799999    999999999999999999999999997643322111           1111  111222   333333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      ..+.++|+||++++.  ......++.++..|  ++|.+++..
T Consensus       103 ~~~~~~D~vi~~~g~--~~~~~~~~~l~~~G--~~v~~g~~~  140 (198)
T 1pqw_A          103 TDGYGVDVVLNSLAG--EAIQRGVQILAPGG--RFIELGKKD  140 (198)
T ss_dssp             TTTCCEEEEEECCCT--HHHHHHHHTEEEEE--EEEECSCGG
T ss_pred             hCCCCCeEEEECCch--HHHHHHHHHhccCC--EEEEEcCCC
Confidence            434358999999983  34455566655544  899887644

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.72  E-value=3.5e-05  Score=74.16  Aligned_cols=74  Identities=23%  Similarity=0.292  Sum_probs=54.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .++++|+|+    |+ |++|+.+++.|++. |++|++++|+.+..+++...          .++..+..|   .+++.++
T Consensus        21 l~~k~VlIi----GA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----------~~~~~~~~D~~d~~~l~~~   85 (467)
T 2axq_A           21 HMGKNVLLL----GS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----------SGSKAISLDVTDDSALDKV   85 (467)
T ss_dssp             --CEEEEEE----CC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----------GTCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEE----CC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----------cCCcEEEEecCCHHHHHHH
Confidence            357899999    97 99999999999998 78999999987554322110          134444455   5677777


Q ss_pred             hcCCCccEEEeCCCC
Q 018900          148 VGGVTFDVVLDNNGK  162 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~  162 (349)
                      +.+  +|+|||+++.
T Consensus        86 l~~--~DvVIn~tp~   98 (467)
T 2axq_A           86 LAD--NDVVISLIPY   98 (467)
T ss_dssp             HHT--SSEEEECSCG
T ss_pred             HcC--CCEEEECCch
Confidence            776  4999999884

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.66  E-value=0.00013  Score=62.95  Aligned_cols=37  Identities=22%  Similarity=0.368  Sum_probs=33.5

Q ss_pred             ccceEEEEEecCCCc----------------ccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~Gg----------------tG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ..+++||||    ||                +|.+|.+++++|.++|++|+++.|..
T Consensus         6 l~gk~vlVT----gG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~   58 (226)
T 1u7z_A            6 LKHLNIMIT----AGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV   58 (226)
T ss_dssp             TTTCEEEEE----ESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CCCCEEEEE----CCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence            357899999    99                69999999999999999999998865

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.53  E-value=0.0001  Score=64.12  Aligned_cols=90  Identities=17%  Similarity=0.218  Sum_probs=64.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhh-h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNV-V  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~-~  148 (349)
                      ..++|+|+    |+ |.+|+.+++.|.+.|+ |++++|+++...           .+. .++.++.+|.   +.+.++ +
T Consensus         8 ~~~~viI~----G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~-----------~~~-~~~~~i~gd~~~~~~l~~a~i   69 (234)
T 2aef_A            8 KSRHVVIC----GW-SESTLECLRELRGSEV-FVLAEDENVRKK-----------VLR-SGANFVHGDPTRVSDLEKANV   69 (234)
T ss_dssp             --CEEEEE----SC-CHHHHHHHHHSTTSEE-EEEESCGGGHHH-----------HHH-TTCEEEESCTTCHHHHHHTTC
T ss_pred             CCCEEEEE----CC-ChHHHHHHHHHHhCCe-EEEEECCHHHHH-----------HHh-cCCeEEEcCCCCHHHHHhcCc
Confidence            35689999    76 9999999999999999 999998875432           222 4688888884   455544 4


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEE
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i  183 (349)
                      .+  .|.||.+.+.+ .....+...+++.+.+ ++|
T Consensus        70 ~~--ad~vi~~~~~d-~~n~~~~~~a~~~~~~~~ii  102 (234)
T 2aef_A           70 RG--ARAVIVDLESD-SETIHCILGIRKIDESVRII  102 (234)
T ss_dssp             TT--CSEEEECCSCH-HHHHHHHHHHHHHCSSSEEE
T ss_pred             ch--hcEEEEcCCCc-HHHHHHHHHHHHHCCCCeEE
Confidence            44  49999887754 4445566777877764 555

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.49  E-value=0.00021  Score=65.19  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=65.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEc-ChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWG-DPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~-D~~~l~~~~~  149 (349)
                      |||.|+    ||+|++|..++..|+..|  ++|+++++++....         ..++.+.  ..++... ...+++++++
T Consensus         1 mKI~Ii----Ga~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~---------a~dL~~~~~~~~l~~~~~t~d~~~a~~   67 (314)
T 1mld_A            1 AKVAVL----GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV---------AADLSHIETRATVKGYLGPEQLPDCLK   67 (314)
T ss_dssp             CEEEEE----TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH---------HHHHTTSSSSCEEEEEESGGGHHHHHT
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHH---------HHHHhccCcCceEEEecCCCCHHHHhC
Confidence            589999    999999999999999888  79999999761110         0011110  1111110 1245777787


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEecc
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~Ss  187 (349)
                      +.  |+||++++.              |...++.+++.+++... .++|++|-
T Consensus        68 ~a--DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           68 GC--DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             TC--SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CC--CEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            76  999999983              33567788887777653 47777653

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.46  E-value=0.00039  Score=64.29  Aligned_cols=100  Identities=16%  Similarity=0.149  Sum_probs=62.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-----C-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-----H-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-----~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~  146 (349)
                      +|+||.|+    ||||++|+.+++.|++++     + +|+.+.+.......+... ...+...  ..+.+...|.++   
T Consensus         8 ~m~kVaIv----GATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~-~~~l~~~--~~~~~~~~~~~~---   77 (352)
T 2nqt_A            8 NATKVAVA----GASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEH-HPHLTPL--AHRVVEPTEAAV---   77 (352)
T ss_dssp             SCEEEEEE----TTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGT-CTTCGGG--TTCBCEECCHHH---
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhh-ccccccc--ceeeeccCCHHH---
Confidence            36799999    999999999999999987     4 788886543221111100 0011110  122332223322   


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                       +.+  .|+|+.+.+...  ...++..+ +.|+ ++|-+|+..
T Consensus        78 -~~~--~DvVf~alg~~~--s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           78 -LGG--HDAVFLALPHGH--SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             -HTT--CSEEEECCTTSC--CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             -hcC--CCEEEECCCCcc--hHHHHHHH-hCCC-EEEEECCCc
Confidence             344  599999988653  56777777 7785 788888754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=5.7e-05  Score=69.16  Aligned_cols=96  Identities=15%  Similarity=0.204  Sum_probs=64.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe--EEEcCh---hhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGDP---AEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~D~---~~l~~~  147 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+...        +   .+.+  +...|.   +.+.+.
T Consensus       140 ~g~~vlV~----Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~--------~---~g~~~~~~~~~~~~~~~~~~~  204 (327)
T 1qor_A          140 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL--------K---AGAWQVINYREEDLVERLKEI  204 (327)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH--------H---HTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH--------H---cCCCEEEECCCccHHHHHHHH
Confidence            46899999    99999999999999999999999999764332111        1   1222  111222   333344


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||+++|  -......++.++..|  +++.+++
T Consensus       205 ~~~~~~D~vi~~~g--~~~~~~~~~~l~~~G--~iv~~g~  240 (327)
T 1qor_A          205 TGGKKVRVVYDSVG--RDTWERSLDCLQRRG--LMVSFGN  240 (327)
T ss_dssp             TTTCCEEEEEECSC--GGGHHHHHHTEEEEE--EEEECCC
T ss_pred             hCCCCceEEEECCc--hHHHHHHHHHhcCCC--EEEEEec
Confidence            44445899999999  445566666666544  7887775

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.31  E-value=0.0019  Score=58.26  Aligned_cols=105  Identities=18%  Similarity=0.265  Sum_probs=65.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccc---ceecCCCeEEEc---ChhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EIVSAGGKTVWG---DPAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~---D~~~l~  145 (349)
                      .|.+||-++     |.|.+|..+++.|++.||+|++.+|+++..+++.........   ++.. ..+++..   |...+.
T Consensus         3 ~Ms~kIgfI-----GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~-~~dvvi~~l~~~~~~~   76 (297)
T 4gbj_A            3 AMSEKIAFL-----GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAIT-PGGIVFSVLADDAAVE   76 (297)
T ss_dssp             -CCCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCC-TTCEEEECCSSHHHHH
T ss_pred             CCCCcEEEE-----ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHh-cCCceeeeccchhhHH
Confidence            466789999     799999999999999999999999998877766544322222   2211 2222221   333333


Q ss_pred             hhh-----cCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          146 NVV-----GGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       146 ~~~-----~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +.+     ... +-+++|++.......++.+.+.+++.|+ +|+
T Consensus        77 ~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~-~~l  119 (297)
T 4gbj_A           77 ELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGA-HYV  119 (297)
T ss_dssp             HHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCC-cee
Confidence            222     111 2378899999999999999999999886 555

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.30  E-value=7.1e-05  Score=68.71  Aligned_cols=96  Identities=21%  Similarity=0.284  Sum_probs=65.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D---~~~l~~~  147 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+.+.        +   .+.+. + ..+   .+.+.+.
T Consensus       145 ~g~~vlV~----Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~--------~---~g~~~~~d~~~~~~~~~i~~~  209 (333)
T 1wly_A          145 PGDYVLIH----AAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR--------K---LGCHHTINYSTQDFAEVVREI  209 (333)
T ss_dssp             TTCEEEET----TTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH--------H---HTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------H---cCCCEEEECCCHHHHHHHHHH
Confidence            46799999    99999999999999999999999999864332111        1   12221 1 112   2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||+++|.  ......++.++..|  +++.++.
T Consensus       210 ~~~~~~d~vi~~~g~--~~~~~~~~~l~~~G--~iv~~g~  245 (333)
T 1wly_A          210 TGGKGVDVVYDSIGK--DTLQKSLDCLRPRG--MCAAYGH  245 (333)
T ss_dssp             HTTCCEEEEEECSCT--TTHHHHHHTEEEEE--EEEECCC
T ss_pred             hCCCCCeEEEECCcH--HHHHHHHHhhccCC--EEEEEec
Confidence            444468999999996  45566666666544  7887765

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.27  E-value=0.00053  Score=64.88  Aligned_cols=91  Identities=16%  Similarity=0.264  Sum_probs=67.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh-hc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~-~~  149 (349)
                      +++|+|+    | .|.+|+.+++.|.+.|++|++++++++..+           .+...++.++.||   ++.|.++ +.
T Consensus         4 ~~~viIi----G-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~-----------~~~~~g~~vi~GDat~~~~L~~agi~   67 (413)
T 3l9w_A            4 GMRVIIA----G-FGRFGQITGRLLLSSGVKMVVLDHDPDHIE-----------TLRKFGMKVFYGDATRMDLLESAGAA   67 (413)
T ss_dssp             CCSEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCHHHHH-----------HHHHTTCCCEESCTTCHHHHHHTTTT
T ss_pred             CCeEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHhCCCeEEEcCCCCHHHHHhcCCC
Confidence            4689999    6 599999999999999999999999875443           3445578899998   4445554 33


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i  183 (349)
                      .  .|+||-+.+. ......++..+++.+.. ++|
T Consensus        68 ~--A~~viv~~~~-~~~n~~i~~~ar~~~p~~~Ii   99 (413)
T 3l9w_A           68 K--AEVLINAIDD-PQTNLQLTEMVKEHFPHLQII   99 (413)
T ss_dssp             T--CSEEEECCSS-HHHHHHHHHHHHHHCTTCEEE
T ss_pred             c--cCEEEECCCC-hHHHHHHHHHHHHhCCCCeEE
Confidence            3  5999887764 45566677777777643 444

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.23  E-value=9.9e-05  Score=67.78  Aligned_cols=100  Identities=13%  Similarity=0.144  Sum_probs=65.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--e-----EEEEEcCCC--CcccCCCCCCCcccceecCC---CeEEEcCh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--E-----VTIMTVGDE--NSDKMKKPPFNRFNEIVSAG---GKTVWGDP  141 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~-----V~~l~R~~~--~~~~~~~~~~~~~~~l~~~~---~~~~~~D~  141 (349)
                      .+||+||    ||+|++|..++..|+..|.  +     ++.+++++.  ....       ...++.+..   ..-+. ..
T Consensus         3 ~~kV~V~----GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g-------~a~DL~~~~~~~~~~~~-~~   70 (333)
T 5mdh_A            3 PIRVLVT----GAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDG-------VLMELQDCALPLLKDVI-AT   70 (333)
T ss_dssp             CEEEEES----STTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHH-------HHHHHHHTCCTTEEEEE-EE
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchh-------hHhhhHhhhhcccCCEE-Ec
Confidence            5799999    9999999999999988775  4     888888531  1110       001111111   00011 12


Q ss_pred             hhHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc--EEEEecc
Q 018900          142 AEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK--QFLFISS  187 (349)
Q Consensus       142 ~~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~--~~i~~Ss  187 (349)
                      .+..+.+++.  |+||++||.              |...++++++++++.+.+  +++.+|-
T Consensus        71 ~~~~~~~~da--DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           71 DKEEIAFKDL--DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             SCHHHHTTTC--SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCcHHHhCCC--CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            3445566666  999999983              467789999999988754  5777664

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.21  E-value=0.00023  Score=66.35  Aligned_cols=100  Identities=20%  Similarity=0.257  Sum_probs=65.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..+++|+|+    |+ |.+|..+++.|...|++|++++|+.+..+...        +.....+..+..+.+++.+.+.+.
T Consensus       164 l~~~~V~Vi----Ga-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~--------~~~g~~~~~~~~~~~~l~~~~~~~  230 (369)
T 2eez_A          164 VAPASVVIL----GG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD--------DVFGGRVITLTATEANIKKSVQHA  230 (369)
T ss_dssp             BCCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTTTSEEEEECCHHHHHHHHHHC
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH--------HhcCceEEEecCCHHHHHHHHhCC
Confidence            346899999    98 99999999999999999999999864432111        101112234445677788887654


Q ss_pred             CccEEEeCCCCChh-----hHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~-----~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                        |+||++++..-.     .....++.++..  ..+|.+++.
T Consensus       231 --DvVi~~~g~~~~~~~~li~~~~l~~mk~g--g~iV~v~~~  268 (369)
T 2eez_A          231 --DLLIGAVLVPGAKAPKLVTRDMLSLMKEG--AVIVDVAVD  268 (369)
T ss_dssp             --SEEEECCC-------CCSCHHHHTTSCTT--CEEEECC--
T ss_pred             --CEEEECCCCCccccchhHHHHHHHhhcCC--CEEEEEecC
Confidence              999999985421     134555655532  478888863

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.20  E-value=0.0014  Score=60.41  Aligned_cols=94  Identities=16%  Similarity=0.203  Sum_probs=57.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      |++||.|+    ||+|++|+.+++.|++++|   +++++.........        + .+  .+.++...|.+ .. .+.
T Consensus         5 m~~kV~Ii----GAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~--------~-~~--~g~~i~~~~~~-~~-~~~   67 (340)
T 2hjs_A            5 QPLNVAVV----GATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR--------M-GF--AESSLRVGDVD-SF-DFS   67 (340)
T ss_dssp             CCCCEEEE----TTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE--------E-EE--TTEEEECEEGG-GC-CGG
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc--------c-cc--CCcceEEecCC-HH-Hhc
Confidence            34789999    9999999999999997765   55665432211100        0 01  11122111221 11 133


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +  +|+|+.+.+..  ....++..+.+.|++ +|.+|+.
T Consensus        68 ~--~DvV~~a~g~~--~s~~~a~~~~~aG~k-vId~Sa~  101 (340)
T 2hjs_A           68 S--VGLAFFAAAAE--VSRAHAERARAAGCS-VIDLSGA  101 (340)
T ss_dssp             G--CSEEEECSCHH--HHHHHHHHHHHTTCE-EEETTCT
T ss_pred             C--CCEEEEcCCcH--HHHHHHHHHHHCCCE-EEEeCCC
Confidence            3  59999998843  456788888888974 7777764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.18  E-value=0.00013  Score=67.16  Aligned_cols=97  Identities=19%  Similarity=0.226  Sum_probs=66.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EE-cC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VW-GD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~D---~~~l~~~  147 (349)
                      .+++|||+    |++|.+|..+++.+...|++|++++|+++..+...           ..+.+. +. .+   .+.+.++
T Consensus       166 ~g~~vlV~----Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-----------~~ga~~~~d~~~~~~~~~~~~~  230 (343)
T 2eih_A          166 PGDDVLVM----AAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-----------ALGADETVNYTHPDWPKEVRRL  230 (343)
T ss_dssp             TTCEEEEC----STTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HHTCSEEEETTSTTHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hcCCCEEEcCCcccHHHHHHHH
Confidence            46799999    99999999999999999999999999765433211           112221 11 12   1334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|+||++++  -......++.++..|  +++.++..
T Consensus       231 ~~~~~~d~vi~~~g--~~~~~~~~~~l~~~G--~~v~~g~~  267 (343)
T 2eih_A          231 TGGKGADKVVDHTG--ALYFEGVIKATANGG--RIAIAGAS  267 (343)
T ss_dssp             TTTTCEEEEEESSC--SSSHHHHHHHEEEEE--EEEESSCC
T ss_pred             hCCCCceEEEECCC--HHHHHHHHHhhccCC--EEEEEecC
Confidence            44445899999999  345666777776655  78877753

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.15  E-value=0.0011  Score=58.94  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=56.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCC-CcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +++||.|+    |++|.+|+.+++.+.+ .|++++++.+... .... ..  ...+..+...++.+    .+++++++.+
T Consensus         4 ~~mkV~V~----Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g-~d--~~~~~g~~~~~v~~----~~dl~~~l~~   72 (273)
T 1dih_A            4 ANIRVAIA----GAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG-SD--AGELAGAGKTGVTV----QSSLDAVKDD   72 (273)
T ss_dssp             CBEEEEET----TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS-CC--TTCSSSSSCCSCCE----ESCSTTTTTS
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhh-hh--HHHHcCCCcCCcee----cCCHHHHhcC
Confidence            35799999    9999999999998874 5889886554332 2100 00  00000111112221    2334455543


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                        +|+||+++.  ......++++|.++|+.
T Consensus        73 --~DvVIDft~--p~~~~~~~~~a~~~G~~   98 (273)
T 1dih_A           73 --FDVFIDFTR--PEGTLNHLAFCRQHGKG   98 (273)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTCE
T ss_pred             --CCEEEEcCC--hHHHHHHHHHHHhCCCC
Confidence              599998885  45677888888888873

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.09  E-value=0.00023  Score=65.31  Aligned_cols=96  Identities=20%  Similarity=0.228  Sum_probs=66.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EE-cC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VW-GD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~D---~~~l~~~  147 (349)
                      .+++|||+    ||+|-+|..+++.+...|.+|++++++++..+..           ...+.+. +. .+   .+.+.+.
T Consensus       148 ~g~~vlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~ga~~~~~~~~~~~~~~~~~~  212 (334)
T 3qwb_A          148 KGDYVLLF----AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-----------KEYGAEYLINASKEDILRQVLKF  212 (334)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCcEEEeCCCchHHHHHHHH
Confidence            56799999    9999999999999999999999999976443211           1112222 21 12   2344444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+|++++|.  ......++.++..|  +++.++.
T Consensus       213 ~~~~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~G~  248 (334)
T 3qwb_A          213 TNGKGVDASFDSVGK--DTFEISLAALKRKG--VFVSFGN  248 (334)
T ss_dssp             TTTSCEEEEEECCGG--GGHHHHHHHEEEEE--EEEECCC
T ss_pred             hCCCCceEEEECCCh--HHHHHHHHHhccCC--EEEEEcC
Confidence            445568999999995  55666677666554  7887764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.09  E-value=0.00018  Score=65.93  Aligned_cols=96  Identities=16%  Similarity=0.140  Sum_probs=60.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe--EEEcChhh----HHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGDPAE----VGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~D~~~----l~~  146 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+.+..+...           ..+.+  +...|.++    +.+
T Consensus       145 ~g~~vlV~----Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-----------~~g~~~~~d~~~~~~~~~~~~~  209 (333)
T 1v3u_A          145 GGETVLVS----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-----------QIGFDAAFNYKTVNSLEEALKK  209 (333)
T ss_dssp             SSCEEEEE----STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSCSCHHHHHHH
T ss_pred             CCCEEEEe----cCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hcCCcEEEecCCHHHHHHHHHH
Confidence            46899999    99999999999999999999999998764432211           11221  12222122    333


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +.. .++|+||+++|..  .....++.++..  .+++.++..
T Consensus       210 ~~~-~~~d~vi~~~g~~--~~~~~~~~l~~~--G~~v~~g~~  246 (333)
T 1v3u_A          210 ASP-DGYDCYFDNVGGE--FLNTVLSQMKDF--GKIAICGAI  246 (333)
T ss_dssp             HCT-TCEEEEEESSCHH--HHHHHHTTEEEE--EEEEECCCC
T ss_pred             HhC-CCCeEEEECCChH--HHHHHHHHHhcC--CEEEEEecc
Confidence            322 2589999999942  233344444433  378877653

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.08  E-value=0.00019  Score=66.56  Aligned_cols=96  Identities=13%  Similarity=0.129  Sum_probs=64.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D---~~~l~~~  147 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+..           ...+.+. + ..+   .+.+.+.
T Consensus       162 ~g~~vlV~----Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~  226 (354)
T 2j8z_A          162 AGDYVLIH----AGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-----------EKLGAAAGFNYKKEDFSEATLKF  226 (354)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------HHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HHcCCcEEEecCChHHHHHHHHH
Confidence            46799999    9999999999999999999999999876443211           1112221 1 122   2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||+++|..  .....++.++..|  +++.++.
T Consensus       227 ~~~~~~d~vi~~~G~~--~~~~~~~~l~~~G--~iv~~G~  262 (354)
T 2j8z_A          227 TKGAGVNLILDCIGGS--YWEKNVNCLALDG--RWVLYGL  262 (354)
T ss_dssp             TTTSCEEEEEESSCGG--GHHHHHHHEEEEE--EEEECCC
T ss_pred             hcCCCceEEEECCCch--HHHHHHHhccCCC--EEEEEec
Confidence            4444589999999964  4455566665544  7887764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.06  E-value=0.00029  Score=64.97  Aligned_cols=96  Identities=15%  Similarity=0.205  Sum_probs=61.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE--EEcCh----hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT--VWGDP----AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~D~----~~l~~  146 (349)
                      .+++|||+    |++|.+|..+++.+...|++|++++|+++..+...           ..+.+.  ...|.    +.+.+
T Consensus       169 ~g~~vlV~----Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-----------~~g~~~~~d~~~~~~~~~~~~~  233 (347)
T 2hcy_A          169 AGHWVAIS----GAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-----------SIGGEVFIDFTKEKDIVGAVLK  233 (347)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-----------HTTCCEEEETTTCSCHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-----------HcCCceEEecCccHhHHHHHHH
Confidence            46799999    99999999999999999999999998775442211           112221  11222    23334


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +..+ ++|+||++++.. ......++.++..  .++|.+++
T Consensus       234 ~~~~-~~D~vi~~~g~~-~~~~~~~~~l~~~--G~iv~~g~  270 (347)
T 2hcy_A          234 ATDG-GAHGVINVSVSE-AAIEASTRYVRAN--GTTVLVGM  270 (347)
T ss_dssp             HHTS-CEEEEEECSSCH-HHHHHHTTSEEEE--EEEEECCC
T ss_pred             HhCC-CCCEEEECCCcH-HHHHHHHHHHhcC--CEEEEEeC
Confidence            3444 689999998842 2333444444433  37887765

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.04  E-value=0.0011  Score=60.04  Aligned_cols=104  Identities=17%  Similarity=0.228  Sum_probs=72.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEE---EcChhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTV---WGDPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~---~~D~~~l~~  146 (349)
                      .|+||-++     |.|..|..+++.|++.||+|++.+|+++..+++........   .++. ...+++   ..|.+.+++
T Consensus         2 ~M~kIgfI-----GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~-~~~dvv~~~l~~~~~v~~   75 (300)
T 3obb_A            2 HMKQIAFI-----GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV-QGADVVISMLPASQHVEG   75 (300)
T ss_dssp             -CCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH-TTCSEEEECCSCHHHHHH
T ss_pred             CcCEEEEe-----eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHH-hcCCceeecCCchHHHHH
Confidence            47899999     79999999999999999999999998765554332211111   1111 122333   235666666


Q ss_pred             hhcCC-------C-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          147 VVGGV-------T-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       147 ~~~~~-------~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ++.+.       + -++||++.....+.++.+.+.+++.|+ +|+
T Consensus        76 V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~-~~l  119 (300)
T 3obb_A           76 LYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AML  119 (300)
T ss_dssp             HHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            55321       1 378999999999999999999999887 555

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.02  E-value=0.00038  Score=64.45  Aligned_cols=96  Identities=15%  Similarity=0.165  Sum_probs=62.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcC---hhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGD---PAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D---~~~l~~~~  148 (349)
                      ++|||+    ||+|.+|..+++.+...|+ +|++++|+.+..+.+..       +   .+.+. + ..+   .+.+.+..
T Consensus       162 ~~vlI~----GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~-------~---~g~~~~~d~~~~~~~~~~~~~~  227 (357)
T 2zb4_A          162 KTMVVS----GAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS-------E---LGFDAAINYKKDNVAEQLRESC  227 (357)
T ss_dssp             CEEEES----STTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-------T---SCCSEEEETTTSCHHHHHHHHC
T ss_pred             cEEEEE----CCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-------H---cCCceEEecCchHHHHHHHHhc
Confidence            899999    9999999999999999999 99999997643322110       0   12221 1 112   22334433


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      .+ ++|+||+++|.  ......++.++..  .+++.++...
T Consensus       228 ~~-~~d~vi~~~G~--~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          228 PA-GVDVYFDNVGG--NISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             TT-CEEEEEESCCH--HHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             CC-CCCEEEECCCH--HHHHHHHHHhccC--cEEEEECCcc
Confidence            34 68999999993  3444455555443  3788877543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.01  E-value=0.00026  Score=65.50  Aligned_cols=96  Identities=13%  Similarity=0.202  Sum_probs=62.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D---~~~l~~~  147 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+...           ..+.+. + ..+   .+.+.+.
T Consensus       170 ~g~~vlV~----GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~~ga~~~~d~~~~~~~~~~~~~  234 (351)
T 1yb5_A          170 AGESVLVH----GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-----------QNGAHEVFNHREVNYIDKIKKY  234 (351)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSTTHHHHHHHH
T ss_pred             CcCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----------HcCCCEEEeCCCchHHHHHHHH
Confidence            46799999    99999999999999999999999998764432111           112221 1 122   2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||+++|..  .....++.++..|  +++.++.
T Consensus       235 ~~~~~~D~vi~~~G~~--~~~~~~~~l~~~G--~iv~~g~  270 (351)
T 1yb5_A          235 VGEKGIDIIIEMLANV--NLSKDLSLLSHGG--RVIVVGS  270 (351)
T ss_dssp             HCTTCEEEEEESCHHH--HHHHHHHHEEEEE--EEEECCC
T ss_pred             cCCCCcEEEEECCChH--HHHHHHHhccCCC--EEEEEec
Confidence            4444689999999842  3344455555443  7887663

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.00  E-value=0.0009  Score=61.38  Aligned_cols=89  Identities=16%  Similarity=0.204  Sum_probs=65.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh-hc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~-~~  149 (349)
                      .++|+|.    |+ |.+|+.++++|.++|+ |++++++++..           . +...++.++.||   ++.+.++ ++
T Consensus       115 ~~~viI~----G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~-----------~-~~~~~~~~i~gd~~~~~~L~~a~i~  176 (336)
T 1lnq_A          115 SRHVVIC----GW-SESTLECLRELRGSEV-FVLAEDENVRK-----------K-VLRSGANFVHGDPTRVSDLEKANVR  176 (336)
T ss_dssp             -CEEEEE----SC-CHHHHHHHTTGGGSCE-EEEESCGGGHH-----------H-HHHTTCEEEESCTTSHHHHHHTCST
T ss_pred             cCCEEEE----CC-cHHHHHHHHHHHhCCc-EEEEeCChhhh-----------h-HHhCCcEEEEeCCCCHHHHHhcChh
Confidence            4589999    75 9999999999999999 99999887543           2 334578899998   4455554 43


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i  183 (349)
                      +  .|.|+-+.+.+ +....++..+++.+.+ +++
T Consensus       177 ~--a~~vi~~~~~d-~~n~~~~~~ar~~~~~~~ii  208 (336)
T 1lnq_A          177 G--ARAVIVDLESD-SETIHCILGIRKIDESVRII  208 (336)
T ss_dssp             T--EEEEEECCSSH-HHHHHHHHHHHTTCTTSEEE
T ss_pred             h--ccEEEEcCCcc-HHHHHHHHHHHHHCCCCeEE
Confidence            4  59999887754 5556667788888764 554

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.97  E-value=0.00026  Score=64.99  Aligned_cols=99  Identities=16%  Similarity=0.187  Sum_probs=64.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D---~~~l~~~  147 (349)
                      .+++|||+    |++|.+|..+++.+...|.+|++++|+++..+.+.          ...+.+. + ..+   .+.+.+.
T Consensus       149 ~g~~vlI~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~  214 (336)
T 4b7c_A          149 NGETVVIS----GAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV----------EELGFDGAIDYKNEDLAAGLKRE  214 (336)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----------HTTCCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----------HHcCCCEEEECCCHHHHHHHHHh
Confidence            56899999    99999999999999999999999998765443220          1112221 1 112   2233333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~v  190 (349)
                      . +.++|+||+++|.  ......++.++..  .+++.++...-
T Consensus       215 ~-~~~~d~vi~~~g~--~~~~~~~~~l~~~--G~iv~~G~~~~  252 (336)
T 4b7c_A          215 C-PKGIDVFFDNVGG--EILDTVLTRIAFK--ARIVLCGAISQ  252 (336)
T ss_dssp             C-TTCEEEEEESSCH--HHHHHHHTTEEEE--EEEEECCCGGG
T ss_pred             c-CCCceEEEECCCc--chHHHHHHHHhhC--CEEEEEeeccc
Confidence            3 2358999999994  3344444544443  37888876543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.97  E-value=0.0004  Score=63.45  Aligned_cols=96  Identities=15%  Similarity=0.128  Sum_probs=65.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EE-cC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VW-GD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~D---~~~l~~~  147 (349)
                      .+++|||+    ||+|-+|..+++.+...|.+|++++++++..+..           ...+.+. +. .+   .+.+.+.
T Consensus       140 ~g~~VlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~Ga~~~~~~~~~~~~~~~~~~  204 (325)
T 3jyn_A          140 PGEIILFH----AAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-----------KALGAWETIDYSHEDVAKRVLEL  204 (325)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-----------HHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCCEEEeCCCccHHHHHHHH
Confidence            46799999    9999999999999999999999999876543221           1112221 21 12   2344455


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||++++.  ......++.++..|  +++.++.
T Consensus       205 ~~~~g~Dvvid~~g~--~~~~~~~~~l~~~G--~iv~~g~  240 (325)
T 3jyn_A          205 TDGKKCPVVYDGVGQ--DTWLTSLDSVAPRG--LVVSFGN  240 (325)
T ss_dssp             TTTCCEEEEEESSCG--GGHHHHHTTEEEEE--EEEECCC
T ss_pred             hCCCCceEEEECCCh--HHHHHHHHHhcCCC--EEEEEec
Confidence            555568999999995  44555566555544  7887764

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.97  E-value=0.0041  Score=57.26  Aligned_cols=96  Identities=16%  Similarity=0.100  Sum_probs=60.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+||.|.    |++|++|+.+++.|.+++. +++++.+......++...    +..+.. ..+.  ..+.+   + +.+ 
T Consensus         4 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~----~~~~~g~~~~~--~~~~~---~-~~~-   68 (345)
T 2ozp_A            4 KKTLSIV----GASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFV----HPNLRGRTNLK--FVPPE---K-LEP-   68 (345)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGT----CGGGTTTCCCB--CBCGG---G-CCC-
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHh----CchhcCccccc--ccchh---H-hcC-
Confidence            5799999    9999999999999998754 888887643322211100    001110 1111  11222   2 333 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                       +|+|+.+.+...  ...++..+.+.|+ ++|-+|+.
T Consensus        69 -vDvV~~a~g~~~--s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           69 -ADILVLALPHGV--FAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             -CSEEEECCCTTH--HHHTHHHHHTTCS-EEEECSST
T ss_pred             -CCEEEEcCCcHH--HHHHHHHHHHCCC-EEEEcCcc
Confidence             599999988653  4667777778887 68888874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.96  E-value=0.00079  Score=61.96  Aligned_cols=96  Identities=24%  Similarity=0.300  Sum_probs=62.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D---~~~l~~~~  148 (349)
                      .+++|||+    ||+|.+|..+++.+...|.+|++++++.+..+...           ..+.+.+ ..+   .+.+.+..
T Consensus       159 ~g~~VlV~----Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~~ga~~v~~~~~~~~~~v~~~~  223 (342)
T 4eye_A          159 AGETVLVL----GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-----------SVGADIVLPLEEGWAKAVREAT  223 (342)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----------HHTCSEEEESSTTHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------hcCCcEEecCchhHHHHHHHHh
Confidence            46799999    99999999999999999999999999765443211           1122222 122   23444445


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+.++|+||+++|..  .....+++++..|  +++.++.
T Consensus       224 ~~~g~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~G~  258 (342)
T 4eye_A          224 GGAGVDMVVDPIGGP--AFDDAVRTLASEG--RLLVVGF  258 (342)
T ss_dssp             TTSCEEEEEESCC----CHHHHHHTEEEEE--EEEEC--
T ss_pred             CCCCceEEEECCchh--HHHHHHHhhcCCC--EEEEEEc
Confidence            555689999999964  4455555555444  7887764

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.94  E-value=0.0048  Score=48.93  Aligned_cols=105  Identities=23%  Similarity=0.278  Sum_probs=70.2

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ..++|.|+    |++   |.+|..+++.|++.||+|+.+.++.+..                .++++    ..+++++..
T Consensus        13 ~p~~IavI----GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----------------~G~~~----~~s~~el~~   68 (138)
T 1y81_A           13 EFRKIALV----GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----------------EGLKC----YRSVRELPK   68 (138)
T ss_dssp             -CCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEEC----BSSGGGSCT
T ss_pred             CCCeEEEE----eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----------------CCeee----cCCHHHhCC
Confidence            46789999    987   8999999999999999977776653211                12221    123333333


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~~  226 (349)
                      .  +|+++-+..  -.....+++.+.+.|++.++..++..                     ...+.+.+++.|++++
T Consensus        69 ~--vDlvii~vp--~~~v~~v~~~~~~~g~~~i~~~~~~~---------------------~~~l~~~a~~~Gi~~i  120 (138)
T 1y81_A           69 D--VDVIVFVVP--PKVGLQVAKEAVEAGFKKLWFQPGAE---------------------SEEIRRFLEKAGVEYS  120 (138)
T ss_dssp             T--CCEEEECSC--HHHHHHHHHHHHHTTCCEEEECTTSC---------------------CHHHHHHHHHHTCEEE
T ss_pred             C--CCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEcCccH---------------------HHHHHHHHHHCCCEEE
Confidence            3  599988776  36777888877778988777655310                     1355667778887643

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.94  E-value=0.0032  Score=55.96  Aligned_cols=94  Identities=15%  Similarity=0.117  Sum_probs=58.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +|+||.|+    |++|.+|+.+++.+.+. ++++++. +|+........   ...+..+. .++.+    .+++++++.+
T Consensus         6 ~mikV~V~----Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d---~gel~g~~-~gv~v----~~dl~~ll~~   73 (272)
T 4f3y_A            6 SSMKIAIA----GASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQD---AGAFLGKQ-TGVAL----TDDIERVCAE   73 (272)
T ss_dssp             CCEEEEES----STTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSB---TTTTTTCC-CSCBC----BCCHHHHHHH
T ss_pred             cccEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccccc---HHHHhCCC-CCcee----cCCHHHHhcC
Confidence            46899999    99999999999999875 6787775 55532211000   00000111 12221    2345555554


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        +|+||++..  ...+...++.|.+.|+ ++|
T Consensus        74 --~DVVIDfT~--p~a~~~~~~~al~~G~-~vV  101 (272)
T 4f3y_A           74 --ADYLIDFTL--PEGTLVHLDAALRHDV-KLV  101 (272)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHHTC-EEE
T ss_pred             --CCEEEEcCC--HHHHHHHHHHHHHcCC-CEE
Confidence              599999984  5566778888888887 455

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.94  E-value=0.00086  Score=60.06  Aligned_cols=80  Identities=21%  Similarity=0.316  Sum_probs=54.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      |||+|.|+    |++|.+|..+++.|.+.|++|++.+|+++..+.+.           ..+++.  .+   ..+.+.+. 
T Consensus        10 mmm~I~iI----G~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g~~~--~~---~~~~~~~a-   68 (286)
T 3c24_A           10 GPKTVAIL----GAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ-----------GMGIPL--TD---GDGWIDEA-   68 (286)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH-----------HTTCCC--CC---SSGGGGTC-
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------hcCCCc--CC---HHHHhcCC-
Confidence            46799999    98899999999999999999999999865443211           112221  12   33345444 


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHh
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKS  176 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~  176 (349)
                       |+||-+...+.  +..+++.+..
T Consensus        69 -DvVi~av~~~~--~~~v~~~l~~   89 (286)
T 3c24_A           69 -DVVVLALPDNI--IEKVAEDIVP   89 (286)
T ss_dssp             -SEEEECSCHHH--HHHHHHHHGG
T ss_pred             -CEEEEcCCchH--HHHHHHHHHH
Confidence             99998776443  5666665543

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.93  E-value=0.0036  Score=57.89  Aligned_cols=103  Identities=17%  Similarity=0.147  Sum_probs=59.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCc-ccCCCCCCCccc--c--eecCCCeEEEcChhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS-DKMKKPPFNRFN--E--IVSAGGKTVWGDPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~-~~~~~~~~~~~~--~--l~~~~~~~~~~D~~~l~~  146 (349)
                      |++||.|+    ||+|++|+.+++.|.+++ .+|+++.++.... ..+... ...+.  .  .....+.+...|+++   
T Consensus         7 M~~kV~Ii----GAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---   78 (354)
T 1ys4_A            7 MKIKVGVL----GATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDA-CYWFQDRDIPENIKDMVVIPTDPKH---   78 (354)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHH-SCCCCSSCCCHHHHTCBCEESCTTS---
T ss_pred             ccceEEEE----CcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHh-cccccccccccCceeeEEEeCCHHH---
Confidence            45799999    999999999999998874 6888887643211 111000 00000  0  000112222224333   


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +++ .++|+|+.+.+..  ....++..+.+.|+ ++|-.|+
T Consensus        79 ~~~-~~~DvV~~atp~~--~~~~~a~~~~~aG~-~VId~s~  115 (354)
T 1ys4_A           79 EEF-EDVDIVFSALPSD--LAKKFEPEFAKEGK-LIFSNAS  115 (354)
T ss_dssp             GGG-TTCCEEEECCCHH--HHHHHHHHHHHTTC-EEEECCS
T ss_pred             Hhc-CCCCEEEECCCch--HHHHHHHHHHHCCC-EEEECCc
Confidence            333 1359999998743  45567777777886 4666665

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.89  E-value=0.00042  Score=64.35  Aligned_cols=97  Identities=20%  Similarity=0.144  Sum_probs=64.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcCh----hhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDP----AEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~----~~l~~~  147 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+..           ...+.+.+ ..+.    +.+.+.
T Consensus       163 ~g~~VlV~----Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~Ga~~~~~~~~~~~~~~~~~~  227 (362)
T 2c0c_A          163 EGKKVLVT----AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL-----------KSLGCDRPINYKTEPVGTVLKQE  227 (362)
T ss_dssp             TTCEEEET----TTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----------HHcCCcEEEecCChhHHHHHHHh
Confidence            46799999    9999999999999999999999999876433211           11123222 1121    223322


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~  189 (349)
                      . +.++|+||++++.  ......+++++..|  +++.++...
T Consensus       228 ~-~~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~g~~~  264 (362)
T 2c0c_A          228 Y-PEGVDVVYESVGG--AMFDLAVDALATKG--RLIVIGFIS  264 (362)
T ss_dssp             C-TTCEEEEEECSCT--HHHHHHHHHEEEEE--EEEECCCGG
T ss_pred             c-CCCCCEEEECCCH--HHHHHHHHHHhcCC--EEEEEeCCC
Confidence            2 3358999999985  45556666666544  899888654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.89  E-value=0.0052  Score=53.84  Aligned_cols=111  Identities=17%  Similarity=0.252  Sum_probs=69.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCC--------Cccc----cee--cCCCeE-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPF--------NRFN----EIV--SAGGKT-  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~--------~~~~----~l~--~~~~~~-  136 (349)
                      ..++|+|+    | .|.+|+.+++.|...|. +|++++++.-....+..+.+        .+..    .+.  .+.+++ 
T Consensus        30 ~~~~VlVv----G-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~  104 (249)
T 1jw9_B           30 KDSRVLIV----G-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAIT  104 (249)
T ss_dssp             HHCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hCCeEEEE----e-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEE
Confidence            46799999    5 68899999999999996 89999987633222221111        1111    011  123333 


Q ss_pred             -EEc--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 -~~~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                       +..  +.+.+.+.+.+.  |+||.+.. +...-..+.++|++.++ .+|..+..+.+|
T Consensus       105 ~~~~~~~~~~~~~~~~~~--DvVi~~~d-~~~~~~~l~~~~~~~~~-p~i~~~~~g~~g  159 (249)
T 1jw9_B          105 PVNALLDDAELAALIAEH--DLVLDCTD-NVAVRNQLNAGCFAAKV-PLVSGAAIRMEG  159 (249)
T ss_dssp             EECSCCCHHHHHHHHHTS--SEEEECCS-SHHHHHHHHHHHHHHTC-CEEEEEEEBTEE
T ss_pred             EEeccCCHhHHHHHHhCC--CEEEEeCC-CHHHHHHHHHHHHHcCC-CEEEeeeccceE
Confidence             332  245566777765  99999875 56655667778888775 566665444333

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.87  E-value=0.0031  Score=57.88  Aligned_cols=94  Identities=14%  Similarity=0.097  Sum_probs=59.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC---CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g---~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +|+||.|.    ||+|++|+.+++.|.+++   .+++++.........+        . +....+.+...|++    .+.
T Consensus         2 ~~~kV~I~----GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~--------~-~~~~~i~~~~~~~~----~~~   64 (336)
T 2r00_A            2 QQFNVAIF----GATGAVGETMLEVLQEREFPVDELFLLASERSEGKTY--------R-FNGKTVRVQNVEEF----DWS   64 (336)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEE--------E-ETTEEEEEEEGGGC----CGG
T ss_pred             CccEEEEE----CCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCce--------e-ecCceeEEecCChH----Hhc
Confidence            36899999    999999999999999873   4677776322111100        0 11111222222222    233


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +  +|+|+.+.+..  .....+..+.+.|+ ++|-.|+.
T Consensus        65 ~--vDvVf~a~g~~--~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           65 Q--VHIALFSAGGE--LSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             G--CSEEEECSCHH--HHHHHHHHHHHTTC-EEEECSST
T ss_pred             C--CCEEEECCCch--HHHHHHHHHHHcCC-EEEEcCCc
Confidence            3  59999998844  35677777778887 67777774

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.87  E-value=0.0089  Score=52.41  Aligned_cols=112  Identities=18%  Similarity=0.208  Sum_probs=70.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~~  137 (349)
                      ...+|+|+    |+ |.+|+++++.|...|. ++++++++.-....+..+.+....++              ..+++++.
T Consensus        27 ~~~~Vlvv----G~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~  101 (251)
T 1zud_1           27 LDSQVLII----GL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLT  101 (251)
T ss_dssp             HTCEEEEE----CC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hcCcEEEE----cc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEE
Confidence            46799999    65 6699999999999996 78888876533333322211111110              01233333


Q ss_pred             E--c--ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          138 W--G--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       138 ~--~--D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      .  .  +.+.+.+++.+.  |+||.+.. +...-..+-++|++.++ .+|..+..+.+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~--DvVi~~~d-~~~~r~~l~~~~~~~~~-p~i~~~~~g~~G~  157 (251)
T 1zud_1          102 ALQQRLTGEALKDAVARA--DVVLDCTD-NMATRQEINAACVALNT-PLITASAVGFGGQ  157 (251)
T ss_dssp             EECSCCCHHHHHHHHHHC--SEEEECCS-SHHHHHHHHHHHHHTTC-CEEEEEEEBTEEE
T ss_pred             EEeccCCHHHHHHHHhcC--CEEEECCC-CHHHHHHHHHHHHHhCC-CEEEEeccccceE
Confidence            2  2  345677777664  99999876 66665666678888775 5777766555443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.82  E-value=0.0065  Score=53.05  Aligned_cols=99  Identities=10%  Similarity=0.163  Sum_probs=62.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcChhhHHhhh---
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGDPAEVGNVV---  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D~~~l~~~~---  148 (349)
                      +||.|+    |++|.+|+.+++.+.+. ++++++..+..+..+           ++.  ..++-++...++...+.+   
T Consensus         1 mkV~V~----Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~-----------~~~~~~~DvvIDfT~p~a~~~~~~~a   65 (245)
T 1p9l_A            1 MRVGVL----GAKGKVGTTMVRAVAAADDLTLSAELDAGDPLS-----------LLTDGNTEVVIDFTHPDVVMGNLEFL   65 (245)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTH-----------HHHHTTCCEEEECSCTTTHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHH-----------HHhccCCcEEEEccChHHHHHHHHHH
Confidence            489999    99999999999999865 899887765432221           111  123333344444433322   


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEecccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAG  189 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~Ss~~  189 (349)
                      ...+.++|+-..|.+.+....+.++|++. ++ .+++.+..+
T Consensus        66 ~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~-~vv~a~N~s  106 (245)
T 1p9l_A           66 IDNGIHAVVGTTGFTAERFQQVESWLVAKPNT-SVLIAPNFA  106 (245)
T ss_dssp             HHTTCEEEECCCCCCHHHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred             HHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCC-CEEEECCcc
Confidence            22346888888887766666666777765 54 566666533

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.82  E-value=0.0011  Score=56.76  Aligned_cols=67  Identities=21%  Similarity=0.276  Sum_probs=48.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++++|.|+    | .|.+|+.+++.|.+.|++|++.+|+.+..+.+           ...+++..     ++.+++.+. 
T Consensus        27 ~~~~I~ii----G-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~-----------~~~g~~~~-----~~~~~~~~~-   84 (215)
T 2vns_A           27 EAPKVGIL----G-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL-----------FPSAAQVT-----FQEEAVSSP-   84 (215)
T ss_dssp             --CCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH-----------SBTTSEEE-----EHHHHTTSC-
T ss_pred             CCCEEEEE----c-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCcee-----cHHHHHhCC-
Confidence            46789999    7 89999999999999999999999986544322           11244432     344556554 


Q ss_pred             ccEEEeCCCC
Q 018900          153 FDVVLDNNGK  162 (349)
Q Consensus       153 ~d~Vi~~a~~  162 (349)
                       |+||.+...
T Consensus        85 -DvVi~av~~   93 (215)
T 2vns_A           85 -EVIFVAVFR   93 (215)
T ss_dssp             -SEEEECSCG
T ss_pred             -CEEEECCCh
Confidence             999988774

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.78  E-value=0.0015  Score=59.98  Aligned_cols=96  Identities=17%  Similarity=0.179  Sum_probs=63.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-Ec-C---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WG-D---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-D---~~~l~~~  147 (349)
                      .+++|||+    |++|-+|..+++.+...|.+|++++++++..+..           ...+.+.+ .. +   .+.+.+.
T Consensus       144 ~g~~VlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~lga~~~~~~~~~~~~~~~~~~  208 (340)
T 3gms_A          144 RNDVLLVN----ACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL-----------LRLGAAYVIDTSTAPLYETVMEL  208 (340)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-----------HHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhCCCcEEEeCCcccHHHHHHHH
Confidence            46799999    9999999999999988999999999987654321           11233222 11 2   2344444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||+++|...  ....++.++..  .+++.++.
T Consensus       209 ~~~~g~Dvvid~~g~~~--~~~~~~~l~~~--G~iv~~G~  244 (340)
T 3gms_A          209 TNGIGADAAIDSIGGPD--GNELAFSLRPN--GHFLTIGL  244 (340)
T ss_dssp             TTTSCEEEEEESSCHHH--HHHHHHTEEEE--EEEEECCC
T ss_pred             hCCCCCcEEEECCCChh--HHHHHHHhcCC--CEEEEEee
Confidence            45556899999998432  23344444433  37887764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.78  E-value=0.00041  Score=64.22  Aligned_cols=95  Identities=22%  Similarity=0.207  Sum_probs=63.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEc-C---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWG-D---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-D---~~~l~~~  147 (349)
                      .+++|||+    ||+|-+|..+++.+...|.+|++++|+++..+...           ..+.+. +.. +   .+.+.+.
T Consensus       167 ~g~~VlV~----Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~lGa~~~~~~~~~~~~~~~~~~  231 (353)
T 4dup_A          167 EGESVLIH----GGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-----------RLGAKRGINYRSEDFAAVIKAE  231 (353)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------hcCCCEEEeCCchHHHHHHHHH
Confidence            46799999    99999999999999999999999998765443211           112221 211 2   2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      . +.++|+||+++|..  .....++.++..|  +++.++.
T Consensus       232 ~-~~g~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~g~  266 (353)
T 4dup_A          232 T-GQGVDIILDMIGAA--YFERNIASLAKDG--CLSIIAF  266 (353)
T ss_dssp             H-SSCEEEEEESCCGG--GHHHHHHTEEEEE--EEEECCC
T ss_pred             h-CCCceEEEECCCHH--HHHHHHHHhccCC--EEEEEEe
Confidence            4 44689999999963  4445555555443  7887664

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.77  E-value=0.0078  Score=55.73  Aligned_cols=94  Identities=17%  Similarity=0.173  Sum_probs=57.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      |++||.|+    ||||++|..|++.|.+++|   +++.+.-.......+        . +...+..+...|.++    +.
T Consensus         1 m~~kVaIv----GATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~--------~-~~~~~~~~~~~~~~~----~~   63 (366)
T 3pwk_A            1 MGYTVAVV----GATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL--------K-FKDQDITIEETTETA----FE   63 (366)
T ss_dssp             -CEEEEEE----TTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEE--------E-ETTEEEEEEECCTTT----TT
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcc--------e-ecCCCceEeeCCHHH----hc
Confidence            46899999    9999999999998888766   445554322111111        0 111112222223222    34


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +  +|+|+.+.+.  ......+..+.+.|+ ++|=+|+.
T Consensus        64 ~--~Dvvf~a~~~--~~s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           64 G--VDIALFSAGS--STSAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             T--CSEEEECSCH--HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             C--CCEEEECCCh--HhHHHHHHHHHHCCC-EEEEcCCc
Confidence            4  5999999873  345666777777887 67777774

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.75  E-value=0.0037  Score=56.68  Aligned_cols=100  Identities=15%  Similarity=0.196  Sum_probs=62.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce---ecCCCeEEE-cChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVW-GDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l---~~~~~~~~~-~D~~~l~~~  147 (349)
                      |++||.|+    |+ |++|..++..|...|+ +|+.++++++..+....    .+.+.   .....++.. .|   + +.
T Consensus         1 M~~kI~VI----Ga-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~----dl~~~~~~~~~~~~i~~t~d---~-~a   67 (309)
T 1ur5_A            1 MRKKISII----GA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKAL----DLYEASPIEGFDVRVTGTNN---Y-AD   67 (309)
T ss_dssp             -CCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHH----HHHTTHHHHTCCCCEEEESC---G-GG
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHH----hHHHhHhhcCCCeEEEECCC---H-HH
Confidence            45799999    88 9999999999999997 98888887654432100    00010   011233332 34   3 34


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +++.  |+||.+++.              |....+.+.+.+.+.....+|.+.|
T Consensus        68 ~~~a--D~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           68 TANS--DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             GTTC--SEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             HCCC--CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            6665  999999873              2344567777777766554554443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.70  E-value=0.0052  Score=55.66  Aligned_cols=105  Identities=19%  Similarity=0.255  Sum_probs=67.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEEE--c-ChhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTVW--G-DPAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~~--~-D~~~l~  145 (349)
                      ..||+|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+........   .+.. .+.+++.  . +...++
T Consensus        19 ~~m~~I~iI-----G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~   92 (310)
T 3doj_A           19 SHMMEVGFL-----GLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVI-KKCKYTIAMLSDPCAAL   92 (310)
T ss_dssp             CCSCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHH
T ss_pred             ccCCEEEEE-----CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHH-HhCCEEEEEcCCHHHHH
Confidence            356899999     68999999999999999999999998876554332211111   1111 1122222  1 333444


Q ss_pred             hhh---cC----C-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          146 NVV---GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       146 ~~~---~~----~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      .++   .+    . +-.+||++..........+.+.+++.|+ +|+
T Consensus        93 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~-~~v  137 (310)
T 3doj_A           93 SVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG-RFV  137 (310)
T ss_dssp             HHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            444   21    1 2367888888888778888888877775 444

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.69  E-value=0.0042  Score=56.51  Aligned_cols=106  Identities=15%  Similarity=0.174  Sum_probs=65.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEc---ChhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWG---DPAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~---D~~~l~~  146 (349)
                      .++|+|.|+     |.|.+|..+++.|.+.|++|++.+|+++..+++..........+.  -.+.+++..   +...++.
T Consensus        29 ~~~~~I~iI-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~  103 (320)
T 4dll_A           29 PYARKITFL-----GTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQD  103 (320)
T ss_dssp             CCCSEEEEE-----CCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHH
T ss_pred             cCCCEEEEE-----CccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHH
Confidence            356799999     679999999999999999999999987655443222111111110  012222221   2333444


Q ss_pred             hhc------CC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          147 VVG------GV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       147 ~~~------~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ++.      .. +-.+||++.......++.+.+.+++.|+ +|+
T Consensus       104 v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~-~~~  146 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGI-AHL  146 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            332      11 2367778877777777777777777665 444

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.66  E-value=0.0015  Score=58.91  Aligned_cols=93  Identities=17%  Similarity=0.207  Sum_probs=61.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcCh-hhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDP-AEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~-~~l~~~~~~  150 (349)
                      .+.+|||+    |++|.+|..+++.+...|.+|++++|+++..+..           ...+.+.+ ..+. +++.+.+. 
T Consensus       125 ~g~~vlV~----Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~~ga~~~~~~~~~~~~~~~~~-  188 (302)
T 1iz0_A          125 PGEKVLVQ----AAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-----------LALGAEEAATYAEVPERAKAWG-  188 (302)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-----------HHTTCSEEEEGGGHHHHHHHTT-
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HhcCCCEEEECCcchhHHHHhc-
Confidence            46799999    9999999999999999999999999976544321           11233322 1122 34444443 


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       ++|+||+ ++.  ......++.++..|  +++.++.
T Consensus       189 -~~d~vid-~g~--~~~~~~~~~l~~~G--~~v~~g~  219 (302)
T 1iz0_A          189 -GLDLVLE-VRG--KEVEESLGLLAHGG--RLVYIGA  219 (302)
T ss_dssp             -SEEEEEE-CSC--TTHHHHHTTEEEEE--EEEEC--
T ss_pred             -CceEEEE-CCH--HHHHHHHHhhccCC--EEEEEeC
Confidence             4799999 886  45556666665544  7887664

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.65  E-value=0.0034  Score=58.20  Aligned_cols=96  Identities=13%  Similarity=0.175  Sum_probs=58.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC--hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D--~~~l~~~~~~  150 (349)
                      ++||.|.    ||+|++|+.+++.|.+++ .+++++.+..+...++..    .+..+.  +. + ..|  ..+ ++.+.+
T Consensus        16 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~----~~~~~~--~~-v-~~dl~~~~-~~~~~~   82 (359)
T 1xyg_A           16 DIRIGLL----GASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMES----VFPHLR--AQ-K-LPTLVSVK-DADFST   82 (359)
T ss_dssp             CEEEEEE----CCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHH----HCGGGT--TS-C-CCCCBCGG-GCCGGG
T ss_pred             CcEEEEE----CcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHH----hCchhc--Cc-c-cccceecc-hhHhcC
Confidence            4799999    999999999999999876 488888764322211100    000010  10 0 011  112 334443


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                        +|+|+.+.+...  ....+..+ +.|+ ++|-.|+.
T Consensus        83 --vDvVf~atp~~~--s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           83 --VDAVFCCLPHGT--TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             --CSEEEECCCTTT--HHHHHHTS-CTTC-EEEECSST
T ss_pred             --CCEEEEcCCchh--HHHHHHHH-hCCC-EEEECCcc
Confidence              599999987543  45566666 7786 68877773

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.64  E-value=0.0009  Score=61.51  Aligned_cols=97  Identities=14%  Similarity=0.122  Sum_probs=61.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE--EEcCh----hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT--VWGDP----AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~D~----~~l~~  146 (349)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|+++..+.+..          ..+.+.  ...+.    +.+.+
T Consensus       155 ~g~~vlI~----Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----------~~g~~~~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVS----AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT----------KFGFDDAFNYKEESDLTAALKR  220 (345)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----------TSCCSEEEETTSCSCSHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----------HcCCceEEecCCHHHHHHHHHH
Confidence            46799999    999999999999999999999999987644332110          012221  11121    22333


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +. +.++|+||++++.  ......++.++..  .+++.++..
T Consensus       221 ~~-~~~~d~vi~~~g~--~~~~~~~~~l~~~--G~~v~~G~~  257 (345)
T 2j3h_A          221 CF-PNGIDIYFENVGG--KMLDAVLVNMNMH--GRIAVCGMI  257 (345)
T ss_dssp             HC-TTCEEEEEESSCH--HHHHHHHTTEEEE--EEEEECCCG
T ss_pred             Hh-CCCCcEEEECCCH--HHHHHHHHHHhcC--CEEEEEccc
Confidence            32 2358999999984  3344444444443  378877653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.64  E-value=0.0022  Score=59.95  Aligned_cols=99  Identities=16%  Similarity=0.221  Sum_probs=65.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..+++|+|+    |+ |.+|..+++.+...|.+|++++|+.+..+.+        .+.....+..+..+.+++.+.+.+.
T Consensus       166 l~g~~V~Vi----G~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~--------~~~~g~~~~~~~~~~~~l~~~l~~a  232 (377)
T 2vhw_A          166 VEPADVVVI----GA-GTAGYNAARIANGMGATVTVLDINIDKLRQL--------DAEFCGRIHTRYSSAYELEGAVKRA  232 (377)
T ss_dssp             BCCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHTTTSSEEEECCHHHHHHHHHHC
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH--------HHhcCCeeEeccCCHHHHHHHHcCC
Confidence            357899999    87 9999999999999999999999976543211        1101112223334566777777654


Q ss_pred             CccEEEeCCCCChh-----hHHHHHHHHHhCCCcEEEEecc
Q 018900          152 TFDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~-----~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                        |+||.+++....     .....++.++..  ..+|.++.
T Consensus       233 --DvVi~~~~~p~~~t~~li~~~~l~~mk~g--~~iV~va~  269 (377)
T 2vhw_A          233 --DLVIGAVLVPGAKAPKLVSNSLVAHMKPG--AVLVDIAI  269 (377)
T ss_dssp             --SEEEECCCCTTSCCCCCBCHHHHTTSCTT--CEEEEGGG
T ss_pred             --CEEEECCCcCCCCCcceecHHHHhcCCCC--cEEEEEec
Confidence              999998764321     134455555543  36888884

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.62  E-value=0.016  Score=50.44  Aligned_cols=104  Identities=12%  Similarity=0.242  Sum_probs=59.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh-cC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV-GG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~-~~  150 (349)
                      +|+||.|+    |+ |.+|+.+++.+.+.++++++. +|+.+.....  .....+.++...++-++...++.+...+ ..
T Consensus         2 ~MmkI~Vi----Ga-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv--~v~~dl~~l~~~DVvIDft~p~a~~~~~~l~   74 (243)
T 3qy9_A            2 ASMKILLI----GY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPY--QQYQHIADVKGADVAIDFSNPNLLFPLLDED   74 (243)
T ss_dssp             -CCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCS--CBCSCTTTCTTCSEEEECSCHHHHHHHHTSC
T ss_pred             CceEEEEE----Cc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCC--ceeCCHHHHhCCCEEEEeCChHHHHHHHHHh
Confidence            36899999    99 999999999999987787764 5544321110  0011122222222323334455544444 23


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .+..+|+...|.+.+....+.++|++   ..+++.+
T Consensus        75 ~g~~vVigTTG~s~e~~~~l~~aa~~---~~v~~a~  107 (243)
T 3qy9_A           75 FHLPLVVATTGEKEKLLNKLDELSQN---MPVFFSA  107 (243)
T ss_dssp             CCCCEEECCCSSHHHHHHHHHHHTTT---SEEEECS
T ss_pred             cCCceEeCCCCCCHHHHHHHHHHHhc---CCEEEEC
Confidence            34788888888665555666666665   2455554

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.61  E-value=0.0015  Score=60.21  Aligned_cols=95  Identities=12%  Similarity=0.141  Sum_probs=63.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEcC----hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D----~~~l~~~~  148 (349)
                      .++|||+    ||+|-+|...++.+...|.+|+++++++++.+.+           ...+.+ ++..+    .+.+.++.
T Consensus       165 ~~~vli~----gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~~Ga~~~~~~~~~~~~~~v~~~~  229 (349)
T 3pi7_A          165 EKAFVMT----AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL-----------KDIGAAHVLNEKAPDFEATLREVM  229 (349)
T ss_dssp             CSEEEES----STTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH-----------HHHTCSEEEETTSTTHHHHHHHHH
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCCEEEECCcHHHHHHHHHHh
Confidence            3789999    9999999999999999999999999876544321           112332 22222    23334443


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+.++|+|+++++...  ....+++++..|  +++.++.
T Consensus       230 ~~~g~D~vid~~g~~~--~~~~~~~l~~~G--~iv~~G~  264 (349)
T 3pi7_A          230 KAEQPRIFLDAVTGPL--ASAIFNAMPKRA--RWIIYGR  264 (349)
T ss_dssp             HHHCCCEEEESSCHHH--HHHHHHHSCTTC--EEEECCC
T ss_pred             cCCCCcEEEECCCChh--HHHHHhhhcCCC--EEEEEec
Confidence            3335799999998532  355666665544  7887764

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.60  E-value=0.0068  Score=55.52  Aligned_cols=99  Identities=18%  Similarity=0.138  Sum_probs=59.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCC---CCcccCCCCCCCcccceecC-CCeEEEc-ChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSA-GGKTVWG-DPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~---~~~~~~~~~~~~~~~~l~~~-~~~~~~~-D~~~l~~~  147 (349)
                      |+||.|+    |+||++|..+++.|.++ .+++..+....   ...+++..    .+..+... +..+... |.+   ++
T Consensus         4 M~kv~Iv----GatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~----~~p~~~~~~~~~v~~~~~~~---~~   72 (337)
T 3dr3_A            4 MLNTLIV----GASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISD----LHPQLKGIVELPLQPMSDIS---EF   72 (337)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHH----HCGGGTTTCCCBEEEESSGG---GT
T ss_pred             ceEEEEE----CCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHH----hCccccCccceeEeccCCHH---HH
Confidence            5899999    99999999999999885 56888886544   22111100    00011111 2222222 332   22


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+  +|+|+.+.+..  ....++..+.+.|. ++|-+|+.
T Consensus        73 ~~~--~Dvvf~a~p~~--~s~~~~~~~~~~g~-~vIDlSa~  108 (337)
T 3dr3_A           73 SPG--VDVVFLATAHE--VSHDLAPQFLEAGC-VVFDLSGA  108 (337)
T ss_dssp             CTT--CSEEEECSCHH--HHHHHHHHHHHTTC-EEEECSST
T ss_pred             hcC--CCEEEECCChH--HHHHHHHHHHHCCC-EEEEcCCc
Confidence            244  59999887733  34566776777786 67777764

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.59  E-value=0.0059  Score=54.91  Aligned_cols=102  Identities=15%  Similarity=0.155  Sum_probs=62.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccceecCCCeEEEc---ChhhH---
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVSAGGKTVWG---DPAEV---  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~---D~~~l---  144 (349)
                      +++|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+......   ...++..  .+++..   +...+   
T Consensus        15 ~~~I~vI-----G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v   87 (296)
T 3qha_A           15 QLKLGYI-----GLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA--ADLIHITVLDDAQVREV   87 (296)
T ss_dssp             CCCEEEE-----CCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT--SSEEEECCSSHHHHHHH
T ss_pred             CCeEEEE-----CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh--CCEEEEECCChHHHHHH
Confidence            4689999     589999999999999999999999998766543221111   1112211  222221   12222   


Q ss_pred             -HhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          145 -GNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       145 -~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                       +.+....+ -.+||++........+.+.+.+++.|+ +|+
T Consensus        88 ~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~-~~~  127 (296)
T 3qha_A           88 VGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDI-HIV  127 (296)
T ss_dssp             HHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTC-EEE
T ss_pred             HHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCC-EEE
Confidence             22222222 356777777777777777777766665 444

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.59  E-value=0.007  Score=48.08  Aligned_cols=107  Identities=17%  Similarity=0.137  Sum_probs=67.8

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ..++|.|+    |++   |.+|..+++.|.+.||+|+.+..+.. ..           ++  .++.++    .+++++-.
T Consensus        12 ~p~~vaVv----Gas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~-~~-----------~i--~G~~~~----~sl~el~~   69 (140)
T 1iuk_A           12 QAKTIAVL----GAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQ-GE-----------EL--FGEEAV----ASLLDLKE   69 (140)
T ss_dssp             HCCEEEEE----TCCSSTTSHHHHHHHHHHHTTCEEEEECGGGT-TS-----------EE--TTEECB----SSGGGCCS
T ss_pred             CCCEEEEE----CCCCCCCChHHHHHHHHHHCCCEEEEeCCCcc-cC-----------cC--CCEEec----CCHHHCCC
Confidence            35789999    998   89999999999999998665543310 11           11  122211    22333332


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~~  226 (349)
                        .+|.++-+...  ..+..+++.|.+.|++.+++.++..                     ...+.+.+++.|++++
T Consensus        70 --~vDlavi~vp~--~~~~~v~~~~~~~gi~~i~~~~g~~---------------------~~~~~~~a~~~Gir~v  121 (140)
T 1iuk_A           70 --PVDILDVFRPP--SALMDHLPEVLALRPGLVWLQSGIR---------------------HPEFEKALKEAGIPVV  121 (140)
T ss_dssp             --CCSEEEECSCH--HHHTTTHHHHHHHCCSCEEECTTCC---------------------CHHHHHHHHHTTCCEE
T ss_pred             --CCCEEEEEeCH--HHHHHHHHHHHHcCCCEEEEcCCcC---------------------HHHHHHHHHHcCCEEE
Confidence              36888876653  5666777777788988776544310                     1366777788887643

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.57  E-value=0.0055  Score=55.24  Aligned_cols=105  Identities=15%  Similarity=0.114  Sum_probs=65.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCc----ccceecCCCeEEEc---ChhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR----FNEIVSAGGKTVWG---DPAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~---D~~~l  144 (349)
                      .++|+|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+.......    ..+.. .+.+++..   +...+
T Consensus         5 ~~~~~I~iI-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~-~~aDvvi~~vp~~~~~   78 (303)
T 3g0o_A            5 GTDFHVGIV-----GLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFA-GVVDALVILVVNAAQV   78 (303)
T ss_dssp             --CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTT-TTCSEEEECCSSHHHH
T ss_pred             CCCCeEEEE-----CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHH-hcCCEEEEECCCHHHH
Confidence            356799999     6899999999999999999999999875444322111111    11111 12233322   22344


Q ss_pred             Hhhh---cC----CC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          145 GNVV---GG----VT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       145 ~~~~---~~----~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +.++   ++    .+ -.+||++..........+.+.+++.|+ +|+
T Consensus        79 ~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~-~~~  124 (303)
T 3g0o_A           79 RQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL-NML  124 (303)
T ss_dssp             HHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            4443   21    12 367888888777777888888877775 444

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.53  E-value=0.0037  Score=57.41  Aligned_cols=95  Identities=19%  Similarity=0.237  Sum_probs=62.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+.+|||+    ||+|-+|..+++.+...|.+|+++ ++++..+           .+...+.+.+..+   .+.+.+...
T Consensus       150 ~g~~VlV~----Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~-----------~~~~lGa~~i~~~~~~~~~~~~~~~  213 (343)
T 3gaz_A          150 DGQTVLIQ----GGGGGVGHVAIQIALARGARVFAT-ARGSDLE-----------YVRDLGATPIDASREPEDYAAEHTA  213 (343)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH-----------HHHHHTSEEEETTSCHHHHHHHHHT
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH-----------HHHHcCCCEeccCCCHHHHHHHHhc
Confidence            46799999    999999999999999999999998 5543322           1112233333222   233444455


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +.++|+||++++.  ......++.++..|  +++.++.
T Consensus       214 ~~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~g~  247 (343)
T 3gaz_A          214 GQGFDLVYDTLGG--PVLDASFSAVKRFG--HVVSCLG  247 (343)
T ss_dssp             TSCEEEEEESSCT--HHHHHHHHHEEEEE--EEEESCC
T ss_pred             CCCceEEEECCCc--HHHHHHHHHHhcCC--eEEEEcc
Confidence            5568999999994  34555556555544  6776654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.52  E-value=0.0018  Score=62.13  Aligned_cols=91  Identities=18%  Similarity=0.279  Sum_probs=62.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhh-h
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNV-V  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~-~  148 (349)
                      .|||+|.     |.|.+|+++++.|.++||+|++++++++..+           .+. ..++.++.||   ++.|.++ +
T Consensus         3 ~M~iiI~-----G~G~vG~~la~~L~~~~~~v~vId~d~~~~~-----------~~~~~~~~~~i~Gd~~~~~~L~~Agi   66 (461)
T 4g65_A            3 AMKIIIL-----GAGQVGGTLAENLVGENNDITIVDKDGDRLR-----------ELQDKYDLRVVNGHASHPDVLHEAGA   66 (461)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHTCSTTEEEEEEESCHHHHH-----------HHHHHSSCEEEESCTTCHHHHHHHTT
T ss_pred             cCEEEEE-----CCCHHHHHHHHHHHHCCCCEEEEECCHHHHH-----------HHHHhcCcEEEEEcCCCHHHHHhcCC
Confidence            5889999     5699999999999999999999999875443           222 1367889998   5666665 3


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEE
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i  183 (349)
                      +.  .|.+|-+.+.+ +.-.-+...||+. +.++.|
T Consensus        67 ~~--ad~~ia~t~~D-e~Nl~~~~~Ak~~~~~~~~i   99 (461)
T 4g65_A           67 QD--ADMLVAVTNTD-ETNMAACQVAFTLFNTPNRI   99 (461)
T ss_dssp             TT--CSEEEECCSCH-HHHHHHHHHHHHHHCCSSEE
T ss_pred             Cc--CCEEEEEcCCh-HHHHHHHHHHHHhcCCccce
Confidence            33  59988765533 2222334455553 666655

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.51  E-value=0.0011  Score=59.75  Aligned_cols=37  Identities=22%  Similarity=0.391  Sum_probs=32.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      +++|.|+    | .|.+|..++..|.+.|++|++++|+++..
T Consensus        15 ~~~I~VI----G-~G~mG~~iA~~la~~G~~V~~~d~~~~~~   51 (302)
T 1f0y_A           15 VKHVTVI----G-GGLMGAGIAQVAAATGHTVVLVDQTEDIL   51 (302)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            5789999    5 59999999999999999999999987544

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.49  E-value=0.0022  Score=56.98  Aligned_cols=75  Identities=16%  Similarity=0.216  Sum_probs=49.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+++|+|+    |+ |.+|+.+++.|.+.|++|++..|+.+...++..       ++...+ .+...|.+++.+    .+
T Consensus       118 ~~k~vlVi----Ga-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~-------~~~~~~-~~~~~~~~~~~~----~~  180 (271)
T 1nyt_A          118 PGLRILLI----GA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAK-------LFAHTG-SIQALSMDELEG----HE  180 (271)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-------HTGGGS-SEEECCSGGGTT----CC
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-------HhhccC-CeeEecHHHhcc----CC
Confidence            46899999    87 779999999999999999999998754432211       010001 222334433322    23


Q ss_pred             ccEEEeCCCCCh
Q 018900          153 FDVVLDNNGKNL  164 (349)
Q Consensus       153 ~d~Vi~~a~~~~  164 (349)
                      .|+||++++...
T Consensus       181 ~DivVn~t~~~~  192 (271)
T 1nyt_A          181 FDLIINATSSGI  192 (271)
T ss_dssp             CSEEEECCSCGG
T ss_pred             CCEEEECCCCCC
Confidence            699999988543

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.47  E-value=0.0096  Score=47.49  Aligned_cols=85  Identities=22%  Similarity=0.156  Sum_probs=57.2

Q ss_pred             ceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .++|.|+    |++   |.+|..+++.|++.||+|+.+....   .           ++  .++.+    ..+++++.. 
T Consensus        22 p~~iaVV----Gas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~---~-----------~i--~G~~~----y~sl~~l~~-   76 (144)
T 2d59_A           22 YKKIALV----GASPKPERDANIVMKYLLEHGYDVYPVNPKY---E-----------EV--LGRKC----YPSVLDIPD-   76 (144)
T ss_dssp             CCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTC---S-----------EE--TTEEC----BSSGGGCSS-
T ss_pred             CCEEEEE----ccCCCCCchHHHHHHHHHHCCCEEEEECCCC---C-----------eE--CCeec----cCCHHHcCC-
Confidence            5789999    998   8999999999999999866554322   1           11  12221    122333332 


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                       .+|.++-+..  -.....+++.|.+.|++.+++.+
T Consensus        77 -~vDlvvi~vp--~~~~~~vv~~~~~~gi~~i~~~~  109 (144)
T 2d59_A           77 -KIEVVDLFVK--PKLTMEYVEQAIKKGAKVVWFQY  109 (144)
T ss_dssp             -CCSEEEECSC--HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             -CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEECC
Confidence             3698887754  37778888888888998776543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.46  E-value=0.003  Score=58.62  Aligned_cols=98  Identities=18%  Similarity=0.294  Sum_probs=64.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..++|+|+    |+ |.+|+.+++.|...|.+|++++|+.+..+.+        .++....+.++..+.+++.+.+.+. 
T Consensus       166 ~~~~VlVi----Ga-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (361)
T 1pjc_A          166 KPGKVVIL----GG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL--------ETLFGSRVELLYSNSAEIETAVAEA-  231 (361)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGSEEEECCHHHHHHHHHTC-
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH--------HHhhCceeEeeeCCHHHHHHHHcCC-
Confidence            35799999    88 9999999999999999999999987544321        1111112334444566777777654 


Q ss_pred             ccEEEeCCCCChh-----hHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~-----~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       |+||++.+....     .....++.++..  ..++.++.
T Consensus       232 -DvVI~~~~~~~~~~~~li~~~~~~~~~~g--~~ivdv~~  268 (361)
T 1pjc_A          232 -DLLIGAVLVPGRRAPILVPASLVEQMRTG--SVIVDVAV  268 (361)
T ss_dssp             -SEEEECCCCTTSSCCCCBCHHHHTTSCTT--CEEEETTC
T ss_pred             -CEEEECCCcCCCCCCeecCHHHHhhCCCC--CEEEEEec
Confidence             999999875321     134445555432  36776664

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.44  E-value=0.0033  Score=57.81  Aligned_cols=99  Identities=15%  Similarity=0.207  Sum_probs=63.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceec---CCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVS---AGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~D~~~l~~~  147 (349)
                      .++||.|+    |++|++|..++..|+.+|  .+|++++++.+......       .++.+   ...++..  ..++.+.
T Consensus         7 ~~~KV~Vi----GaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a-------~DL~~~~~~~~~i~~--t~d~~~a   73 (343)
T 3fi9_A            7 TEEKLTIV----GAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVA-------EEIRHCGFEGLNLTF--TSDIKEA   73 (343)
T ss_dssp             CSSEEEEE----TTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHH-------HHHHHHCCTTCCCEE--ESCHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHH-------HhhhhCcCCCCceEE--cCCHHHH
Confidence            46799999    999999999999999988  58999998754332100       00110   1111111  1345556


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc--EEEEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK--QFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~--~~i~~S  186 (349)
                      +++.  |+||.++|.              |....+.+.+.+.+.+.+  .++.+|
T Consensus        74 l~dA--DvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           74 LTDA--KYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             HTTE--EEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             hCCC--CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            7666  999999983              445677778877776533  355555

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.42  E-value=0.0057  Score=54.64  Aligned_cols=102  Identities=23%  Similarity=0.311  Sum_probs=64.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEEEc---ChhhHHhhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTVWG---DPAEVGNVV  148 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~---D~~~l~~~~  148 (349)
                      |+|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+........   .+.. .+.+++..   +...+++++
T Consensus         2 ~~i~iI-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~   75 (287)
T 3pef_A            2 QKFGFI-----GLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVV-ESCPVTFAMLADPAAAEEVC   75 (287)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHH
T ss_pred             CEEEEE-----eecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-hcCCEEEEEcCCHHHHHHHH
Confidence            689999     57999999999999999999999998876554322211111   1111 11222221   233444443


Q ss_pred             ---cC----C-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          149 ---GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       149 ---~~----~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                         .+    . +-.+||++.+......+.+.+.+++.|+ +|+
T Consensus        76 ~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~-~~~  117 (287)
T 3pef_A           76 FGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG-RFL  117 (287)
T ss_dssp             HSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             cCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC-EEE
Confidence               11    1 1367888887777777888888777775 444

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.42  E-value=0.01  Score=53.07  Aligned_cols=95  Identities=12%  Similarity=0.081  Sum_probs=58.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEE-cCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +++||.|+    |++|.+|+.+++.+.+. +.++++.. |+......   .....+..+...++.+    .+++++++..
T Consensus        20 ~~irV~V~----Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G---~d~gel~G~~~~gv~v----~~dl~~ll~~   88 (288)
T 3ijp_A           20 GSMRLTVV----GANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD---KDASILIGSDFLGVRI----TDDPESAFSN   88 (288)
T ss_dssp             -CEEEEES----STTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT---SBGGGGTTCSCCSCBC----BSCHHHHTTS
T ss_pred             CCeEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc---cchHHhhccCcCCcee----eCCHHHHhcC
Confidence            56799999    99999999999998865 67877764 43321100   0000000111123322    2345556654


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        +|+||++..  ...+...++.|.+.|+ ++|
T Consensus        89 --aDVvIDFT~--p~a~~~~~~~~l~~Gv-~vV  116 (288)
T 3ijp_A           89 --TEGILDFSQ--PQASVLYANYAAQKSL-IHI  116 (288)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHHTC-EEE
T ss_pred             --CCEEEEcCC--HHHHHHHHHHHHHcCC-CEE
Confidence              699999985  5566777888888887 455

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=96.41  E-value=0.031  Score=50.54  Aligned_cols=93  Identities=10%  Similarity=0.077  Sum_probs=59.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh----
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV----  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~----  148 (349)
                      .|+||.|+    |..|++|...++.|.+.+.+++++....+.....        .+. ..+. -...|.+++.+.+    
T Consensus         2 ~mirvgiI----G~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~--------~~~-~~~~-~~~~~~~~ll~~~~~l~   67 (312)
T 3o9z_A            2 HMTRFALT----GLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLV--------DSF-FPEA-EFFTEPEAFEAYLEDLR   67 (312)
T ss_dssp             -CCEEEEE----CTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGG--------GGT-CTTC-EEESCHHHHHHHHHHHH
T ss_pred             CceEEEEE----CCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHH--------Hhh-CCCC-ceeCCHHHHHHHhhhhc
Confidence            47899999    8889999999999998888877776433221111        000 0122 2344555554332    


Q ss_pred             -cCCCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          149 -GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       149 -~~~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                       .+.++|+|+-+..                         .+....+.|++++++.|+
T Consensus        68 ~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~  124 (312)
T 3o9z_A           68 DRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGR  124 (312)
T ss_dssp             HTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCC
T ss_pred             ccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence             4556899986655                         255667778888877775

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.41  E-value=0.0031  Score=58.02  Aligned_cols=96  Identities=22%  Similarity=0.234  Sum_probs=62.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cC----hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GD----PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D----~~~l~~  146 (349)
                      .+.+|||+    |+ |.+|..+++.+...|. +|++++|+++..+.           +...+.+.+. .+    .+.+.+
T Consensus       167 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~-----------~~~~Ga~~~~~~~~~~~~~~v~~  230 (348)
T 2d8a_A          167 SGKSVLIT----GA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL-----------AKKVGADYVINPFEEDVVKEVMD  230 (348)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH-----------HHHHTCSEEECTTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-----------HHHhCCCEEECCCCcCHHHHHHH
Confidence            56789999    99 9999999999999999 99999987643321           1111332221 11    223444


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +..+.++|+||++++. .......++.++..|  +++.++.
T Consensus       231 ~~~g~g~D~vid~~g~-~~~~~~~~~~l~~~G--~iv~~g~  268 (348)
T 2d8a_A          231 ITDGNGVDVFLEFSGA-PKALEQGLQAVTPAG--RVSLLGL  268 (348)
T ss_dssp             HTTTSCEEEEEECSCC-HHHHHHHHHHEEEEE--EEEECCC
T ss_pred             HcCCCCCCEEEECCCC-HHHHHHHHHHHhcCC--EEEEEcc
Confidence            4444458999999984 233455566665544  7887775

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.40  E-value=0.0097  Score=53.53  Aligned_cols=37  Identities=32%  Similarity=0.474  Sum_probs=33.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ++++|.|+    ||.|.+|..+++.|.+.|++|++++|+++
T Consensus        20 ~~~~I~iI----Gg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIV----GGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TCCCEEEE----TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            56789999    88999999999999999999999998763

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.40  E-value=0.0031  Score=60.18  Aligned_cols=96  Identities=18%  Similarity=0.191  Sum_probs=63.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--c--C-------
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--G--D-------  140 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~--D-------  140 (349)
                      ..+++|||+    ||+|-+|...++.+...|.+|++++++++..+.+           ...+.+.+.  .  |       
T Consensus       219 ~~g~~VlV~----GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-----------~~lGa~~~i~~~~~~~~~~~~~  283 (447)
T 4a0s_A          219 KQGDIVLIW----GASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-----------RALGCDLVINRAELGITDDIAD  283 (447)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCCCEEEHHHHTCCTTGGG
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhcCCCEEEecccccccccccc
Confidence            356899999    9999999999999999999999999876443321           111222211  0  1       


Q ss_pred             ------------hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          141 ------------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       141 ------------~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                                  .+.+.+.. +.++|+||+++|.  ......++.++..|  ++|.+++
T Consensus       284 ~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~~G--~iv~~G~  337 (447)
T 4a0s_A          284 DPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARRGG--TVVTCGS  337 (447)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCTTC--EEEESCC
T ss_pred             cccccchhhhHHHHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhcCC--EEEEEec
Confidence                        12333333 4458999999995  34455555555444  7887775

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.38  E-value=0.015  Score=53.69  Aligned_cols=101  Identities=17%  Similarity=0.125  Sum_probs=58.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEc-CCCCcccCCCCCCCccc--c--eecCCCeEEEcChhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV-GDENSDKMKKPPFNRFN--E--IVSAGGKTVWGDPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R-~~~~~~~~~~~~~~~~~--~--l~~~~~~~~~~D~~~l~~  146 (349)
                      +++||.|.    ||+|++|+.+++.|.+.. .+|+++.. .......+.... ..+.  .  .....+.+...|++.   
T Consensus         3 ~~~kV~Ii----GAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~---   74 (350)
T 2ep5_A            3 DKIKVSLL----GSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAV-KWIEQGDIPEEVQDLPIVSTNYED---   74 (350)
T ss_dssp             CCEEEEEE----SCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHC-CCCSSSSCCHHHHTCBEECSSGGG---
T ss_pred             CCcEEEEE----CcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhc-CcccccccccCCceeEEeeCCHHH---
Confidence            35799999    999999999999998764 58888862 211111100000 0000  0  000122222123322   


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       +.+  +|+|+.+.+..  ....++..+.+.|+ ++|-.|+
T Consensus        75 -~~~--vDvVf~atp~~--~s~~~a~~~~~aG~-~VId~s~  109 (350)
T 2ep5_A           75 -HKD--VDVVLSALPNE--LAESIELELVKNGK-IVVSNAS  109 (350)
T ss_dssp             -GTT--CSEEEECCCHH--HHHHHHHHHHHTTC-EEEECSS
T ss_pred             -hcC--CCEEEECCChH--HHHHHHHHHHHCCC-EEEECCc
Confidence             333  59999888743  45677888888887 4666665

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.38  E-value=0.0033  Score=58.50  Aligned_cols=97  Identities=20%  Similarity=0.217  Sum_probs=59.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-Ec-ChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WG-DPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~-D~~~l~~~~~~  150 (349)
                      .+.+|||+    ||+|-+|..+++.+...|.+|+++++. +..+           .+...+.+.+ .. +.+..+.+.+.
T Consensus       183 ~g~~VlV~----Ga~G~vG~~~~qla~~~Ga~Vi~~~~~-~~~~-----------~~~~lGa~~v~~~~~~~~~~~~~~~  246 (375)
T 2vn8_A          183 TGKRVLIL----GASGGVGTFAIQVMKAWDAHVTAVCSQ-DASE-----------LVRKLGADDVIDYKSGSVEEQLKSL  246 (375)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECG-GGHH-----------HHHHTTCSEEEETTSSCHHHHHHTS
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCh-HHHH-----------HHHHcCCCEEEECCchHHHHHHhhc
Confidence            46799999    999999999999999999999888743 2221           1112233322 11 22222333332


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .++|+||+++|.........++.++..  .+++.++.
T Consensus       247 ~g~D~vid~~g~~~~~~~~~~~~l~~~--G~iv~~g~  281 (375)
T 2vn8_A          247 KPFDFILDNVGGSTETWAPDFLKKWSG--ATYVTLVT  281 (375)
T ss_dssp             CCBSEEEESSCTTHHHHGGGGBCSSSC--CEEEESCC
T ss_pred             CCCCEEEECCCChhhhhHHHHHhhcCC--cEEEEeCC
Confidence            358999999996533223333334433  37887664

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.32  E-value=0.0061  Score=58.23  Aligned_cols=39  Identities=15%  Similarity=0.244  Sum_probs=33.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |+|||.|+     |.|++|..++..|.+.||+|++++|+++..+
T Consensus         1 M~mkI~VI-----G~G~vG~~lA~~La~~G~~V~~~D~~~~~v~   39 (450)
T 3gg2_A            1 MSLDIAVV-----GIGYVGLVSATCFAELGANVRCIDTDRNKIE   39 (450)
T ss_dssp             -CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCEEEEE-----CcCHHHHHHHHHHHhcCCEEEEEECCHHHHH
Confidence            34799999     5799999999999999999999999875444

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.29  E-value=0.0039  Score=57.34  Aligned_cols=95  Identities=18%  Similarity=0.164  Sum_probs=61.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---C-hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D-~~~l~~~~  148 (349)
                      .+.+|||+    ||+|-+|...++.+...|.+|+++++++++.+.+           ...+.+.+..   | .+.+.++ 
T Consensus       150 ~g~~VlV~----gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~~~~-  213 (346)
T 3fbg_A          150 EGKTLLII----NGAGGVGSIATQIAKAYGLRVITTASRNETIEWT-----------KKMGADIVLNHKESLLNQFKTQ-  213 (346)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH-----------HHHTCSEEECTTSCHHHHHHHH-
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhcCCcEEEECCccHHHHHHHh-
Confidence            56899999    9999999999999999999999999876443211           1123332221   1 2334444 


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .+.++|+|+++++.. ......+++++..|  ++|.++
T Consensus       214 ~~~g~Dvv~d~~g~~-~~~~~~~~~l~~~G--~iv~~~  248 (346)
T 3fbg_A          214 GIELVDYVFCTFNTD-MYYDDMIQLVKPRG--HIATIV  248 (346)
T ss_dssp             TCCCEEEEEESSCHH-HHHHHHHHHEEEEE--EEEESS
T ss_pred             CCCCccEEEECCCch-HHHHHHHHHhccCC--EEEEEC
Confidence            344589999998832 22345555555544  677554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.28  E-value=0.0072  Score=55.95  Aligned_cols=104  Identities=16%  Similarity=0.314  Sum_probs=62.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccceec-C-CCeEEEc--ChhhH--
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVS-A-GGKTVWG--DPAEV--  144 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~l~~-~-~~~~~~~--D~~~l--  144 (349)
                      +|+|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+......   ...++.. . ..+++..  -...+  
T Consensus        22 ~mkIgiI-----GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~   96 (358)
T 4e21_A           22 SMQIGMI-----GLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDS   96 (358)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHH
T ss_pred             CCEEEEE-----CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHH
Confidence            4799999     589999999999999999999999987654433222111   1111111 1 0122221  11122  


Q ss_pred             --HhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          145 --GNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       145 --~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        ..+....+ -++||++.......+..+.+.+++.|+ +|+
T Consensus        97 vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~-~~v  137 (358)
T 4e21_A           97 MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGI-TYV  137 (358)
T ss_dssp             HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCC-EEE
Confidence              22222211 367778877777777788887777776 454

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.28  E-value=0.0016  Score=62.32  Aligned_cols=96  Identities=19%  Similarity=0.367  Sum_probs=64.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--c-----------
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--G-----------  139 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~-----------  139 (349)
                      .+.+|||+    |++|-+|...++.+...|.+|+++++++++.+.+           ...+.+.+.  .           
T Consensus       228 ~g~~VlV~----GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~d~~~~~~~~  292 (456)
T 3krt_A          228 QGDNVLIW----GASGGLGSYATQFALAGGANPICVVSSPQKAEIC-----------RAMGAEAIIDRNAEGYRFWKDEN  292 (456)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHHTCCEEEETTTTTCCSEEETT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-----------HhhCCcEEEecCcCccccccccc
Confidence            46789999    9999999999999999999999999865443221           111222111  0           


Q ss_pred             --Ch-------hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          140 --DP-------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       140 --D~-------~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                        |.       +.+.++..+.++|+||+++|.  ......+++++..|  +++.++.
T Consensus       293 ~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~G--~iv~~G~  345 (456)
T 3krt_A          293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKGG--TITTCAS  345 (456)
T ss_dssp             EECHHHHHHHHHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEEE--EEEESCC
T ss_pred             ccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCCc--EEEEEec
Confidence              11       344455555568999999985  44555566665544  6887664

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.27  E-value=0.0066  Score=56.37  Aligned_cols=85  Identities=19%  Similarity=0.212  Sum_probs=53.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHH-hCCCeEEEEEcCCCCcccCCCCC-C---Ccc-cceec--CCCeEEEcC---h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPP-F---NRF-NEIVS--AGGKTVWGD---P  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll-~~g~~V~~l~R~~~~~~~~~~~~-~---~~~-~~l~~--~~~~~~~~D---~  141 (349)
                      .+|+||||    ||+..+|.+.+.+|. ..|..|+++.|..+...+..... +   ..+ .++..  .....+.+|   .
T Consensus        49 ~pK~vLVt----GaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           49 APKNVLVL----GCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD  124 (401)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence            47899999    999999999999887 67999999998765443211000 0   000 01112  233456677   4


Q ss_pred             hhHHhhhc----CC-CccEEEeCCC
Q 018900          142 AEVGNVVG----GV-TFDVVLDNNG  161 (349)
Q Consensus       142 ~~l~~~~~----~~-~~d~Vi~~a~  161 (349)
                      +..+++++    .. ++|++||.++
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A  149 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLA  149 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecc
Confidence            44444432    22 3899999988

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.26  E-value=0.0044  Score=55.38  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=64.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCc---ccceecCCCeEEEc---ChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEIVSAGGKTVWG---DPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~---D~~~l~~~  147 (349)
                      |++|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+.+.......   ..+.. .+.+++..   +...++++
T Consensus         1 M~~I~ii-----G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~advvi~~v~~~~~~~~v   74 (287)
T 3pdu_A            1 MTTYGFL-----GLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVC-AACDITIAMLADPAAAREV   74 (287)
T ss_dssp             CCCEEEE-----CCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHH-HHCSEEEECCSSHHHHHHH
T ss_pred             CCeEEEE-----ccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-HcCCEEEEEcCCHHHHHHH
Confidence            4689999     5899999999999999999999999886654432111111   11111 11222221   22344443


Q ss_pred             h-------cCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          148 V-------GGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       148 ~-------~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +       ... +-.+||++........+.+.+.+++.|+ +|+
T Consensus        75 ~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~-~~~  117 (287)
T 3pdu_A           75 CFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG-RFL  117 (287)
T ss_dssp             HHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            3       211 2367888888777777888887777775 444

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.26  E-value=0.0043  Score=52.59  Aligned_cols=82  Identities=17%  Similarity=0.233  Sum_probs=51.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |+|+|+    ||+|++|+.+++.|.+.|++|++++|+++..+.+...    +.... ...++.   ..++.+++++.  |
T Consensus         1 m~i~ii----Ga~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~-~~~~~~---~~~~~~~~~~~--D   66 (212)
T 1jay_A            1 MRVALL----GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE----YRRIA-GDASIT---GMKNEDAAEAC--D   66 (212)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH----HHHHH-SSCCEE---EEEHHHHHHHC--S
T ss_pred             CeEEEE----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hcccc-ccCCCC---hhhHHHHHhcC--C
Confidence            479999    9999999999999999999999999986543321100    00000 001111   13455556554  9


Q ss_pred             EEEeCCCCChhhHHHHHH
Q 018900          155 VVLDNNGKNLDAVRPVAD  172 (349)
Q Consensus       155 ~Vi~~a~~~~~~~~~ll~  172 (349)
                      +||++...+  ....+++
T Consensus        67 ~Vi~~~~~~--~~~~~~~   82 (212)
T 1jay_A           67 IAVLTIPWE--HAIDTAR   82 (212)
T ss_dssp             EEEECSCHH--HHHHHHH
T ss_pred             EEEEeCChh--hHHHHHH
Confidence            999998743  2344444

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.26  E-value=0.0068  Score=48.44  Aligned_cols=84  Identities=21%  Similarity=0.215  Sum_probs=56.7

Q ss_pred             ceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCC--CCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh
Q 018900           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~  148 (349)
                      .++|.|+    |++   |.+|..+++.|++.||+|+.+.++.  +..                .+++++    .+++++.
T Consensus        13 p~~IavI----Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i----------------~G~~~~----~sl~el~   68 (145)
T 2duw_A           13 TRTIALV----GASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL----------------LGQQGY----ATLADVP   68 (145)
T ss_dssp             CCCEEEE----SCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE----------------TTEECC----SSTTTCS
T ss_pred             CCEEEEE----CcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc----------------CCeecc----CCHHHcC
Confidence            5789999    998   8999999999999999977766544  111                122211    2223332


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEe
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                      .  .+|+++-+..  -..+..+++.+.+.|++.++..
T Consensus        69 ~--~~Dlvii~vp--~~~v~~v~~~~~~~g~~~i~i~  101 (145)
T 2duw_A           69 E--KVDMVDVFRN--SEAAWGVAQEAIAIGAKTLWLQ  101 (145)
T ss_dssp             S--CCSEEECCSC--STHHHHHHHHHHHHTCCEEECC
T ss_pred             C--CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEc
Confidence            2  3699888766  2666777777777888776643

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.25  E-value=0.0049  Score=57.08  Aligned_cols=95  Identities=16%  Similarity=0.202  Sum_probs=64.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D----~~~l~~~  147 (349)
                      .+.+|||+    | +|.+|...++.+...|.+|++++++++..+.           +...+.+.+ ..+    .+.+.++
T Consensus       189 ~g~~VlV~----G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-----------~~~lGa~~vi~~~~~~~~~~v~~~  252 (363)
T 3uog_A          189 AGDRVVVQ----G-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-----------AFALGADHGINRLEEDWVERVYAL  252 (363)
T ss_dssp             TTCEEEEE----S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------HHHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH-----------HHHcCCCEEEcCCcccHHHHHHHH
Confidence            46799999    8 8999999999999999999999987643321           111233322 222    2345555


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..+.++|+||+++|.  ......++.++..|  +++.++.
T Consensus       253 ~~g~g~D~vid~~g~--~~~~~~~~~l~~~G--~iv~~G~  288 (363)
T 3uog_A          253 TGDRGADHILEIAGG--AGLGQSLKAVAPDG--RISVIGV  288 (363)
T ss_dssp             HTTCCEEEEEEETTS--SCHHHHHHHEEEEE--EEEEECC
T ss_pred             hCCCCceEEEECCCh--HHHHHHHHHhhcCC--EEEEEec
Confidence            555568999999993  44556666666554  7887764

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.20  E-value=0.0041  Score=56.75  Aligned_cols=102  Identities=20%  Similarity=0.270  Sum_probs=62.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ..++||.|+    |+ |.+|..++..|+..|.  +|++++++++............. .+. .++++..+|.+    .++
T Consensus         7 ~~~~kV~Vi----Ga-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~----a~~   75 (326)
T 3vku_A            7 KDHQKVILV----GD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYS----DAK   75 (326)
T ss_dssp             CCCCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGG----GGT
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHH----Hhc
Confidence            356799999    85 9999999999999886  89999987543321100000000 000 23444444433    455


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                      +.  |+||.++|.              |..-.+.+.+.+.+..- ..++.+|
T Consensus        76 ~a--DiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           76 DA--DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             TC--SEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             CC--CEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            55  999999883              45567788888877653 3455554

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.20  E-value=0.0017  Score=58.11  Aligned_cols=92  Identities=20%  Similarity=0.200  Sum_probs=57.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--------------CCCeEEEc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--------------AGGKTVWG  139 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--------------~~~~~~~~  139 (349)
                      +++|.|+    | .|.+|..+++.|...|++|++.+|+++..++........+.....              .++..   
T Consensus         4 ~~kV~VI----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~---   75 (283)
T 4e12_A            4 ITNVTVL----G-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY---   75 (283)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE---
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE---
Confidence            5789999    5 699999999999999999999999875443221100000000000              01111   


Q ss_pred             ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHh
Q 018900          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (349)
Q Consensus       140 D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~  176 (349)
                       ..++.+++.++  |+||.+...+.+....+++.+..
T Consensus        76 -~~~~~~~~~~a--DlVi~av~~~~~~~~~v~~~l~~  109 (283)
T 4e12_A           76 -SDDLAQAVKDA--DLVIEAVPESLDLKRDIYTKLGE  109 (283)
T ss_dssp             -ESCHHHHTTTC--SEEEECCCSCHHHHHHHHHHHHH
T ss_pred             -eCCHHHHhccC--CEEEEeccCcHHHHHHHHHHHHh
Confidence             13344556555  99999998887666666655443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.18  E-value=0.006  Score=54.87  Aligned_cols=38  Identities=24%  Similarity=0.317  Sum_probs=32.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      +||+|.|+    | .|.+|..++..|.+.|++|++++|+++..
T Consensus         2 ~~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~   39 (316)
T 2ew2_A            2 NAMKIAIA----G-AGAMGSRLGIMLHQGGNDVTLIDQWPAHI   39 (316)
T ss_dssp             --CEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCeEEEE----C-cCHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence            45799999    6 59999999999999999999999976544

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.15  E-value=0.0053  Score=56.35  Aligned_cols=95  Identities=21%  Similarity=0.195  Sum_probs=61.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---C-hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D-~~~l~~~  147 (349)
                      .+.+|||+    |+ |-+|..+++.+...|. +|++++++++..+.....    ..       .++..   | .+.+.++
T Consensus       164 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l----a~-------~v~~~~~~~~~~~~~~~  227 (343)
T 2dq4_A          164 SGKSVLIT----GA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY----AD-------RLVNPLEEDLLEVVRRV  227 (343)
T ss_dssp             TTSCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT----CS-------EEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----HH-------hccCcCccCHHHHHHHh
Confidence            56789999    99 9999999999999999 999999876544322111    00       11111   1 1233333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      . +.++|+||++.+. .......++.++..|  +++.++.
T Consensus       228 ~-~~g~D~vid~~g~-~~~~~~~~~~l~~~G--~iv~~g~  263 (343)
T 2dq4_A          228 T-GSGVEVLLEFSGN-EAAIHQGLMALIPGG--EARILGI  263 (343)
T ss_dssp             H-SSCEEEEEECSCC-HHHHHHHHHHEEEEE--EEEECCC
T ss_pred             c-CCCCCEEEECCCC-HHHHHHHHHHHhcCC--EEEEEec
Confidence            3 4458999999984 233455666666544  7887764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.12  E-value=0.0055  Score=70.66  Aligned_cols=210  Identities=11%  Similarity=0.063  Sum_probs=113.6

Q ss_pred             ccceEEEEEecCCCcccc-hHHHHHHHHHhCCCeEEEEEcCCCC-----cccCCCCCCCcccceecCC--CeEEEcC---
Q 018900           72 AEKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMTVGDEN-----SDKMKKPPFNRFNEIVSAG--GKTVWGD---  140 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~-iG~~l~~~Ll~~g~~V~~l~R~~~~-----~~~~~~~~~~~~~~l~~~~--~~~~~~D---  140 (349)
                      .++|.+|||    ||++. ||+.+++.|+++|.+|++++|+.+.     ..++.       .++...+  +..+.+|   
T Consensus      2134 l~gKvaLVT----GAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~-------~~l~~~G~~~~~v~~Dvtd 2202 (3089)
T 3zen_D         2134 XXDEVAVVT----GASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLY-------RDHARFDATLWVVPANMAS 2202 (3089)
T ss_dssp             CCCCEEEEE----SCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHH-------HHHCCTTCEEEEEECCTTC
T ss_pred             CCCCEEEEe----CCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHH-------HHHhhcCCeEEEEEecCCC
Confidence            357899999    99999 9999999999999999999998754     22110       1121122  3345555   


Q ss_pred             hhhHHhhh----c----CC-CccEEEeCCCC-C----------------h------------hhH----HHHHHHHHhCC
Q 018900          141 PAEVGNVV----G----GV-TFDVVLDNNGK-N----------------L------------DAV----RPVADWAKSSG  178 (349)
Q Consensus       141 ~~~l~~~~----~----~~-~~d~Vi~~a~~-~----------------~------------~~~----~~ll~~a~~~g  178 (349)
                      .+++++++    .    .. ++|++||+||. +                +            .++    +.++..++..+
T Consensus      2203 ~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~ 2282 (3089)
T 3zen_D         2203 YSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERD 2282 (3089)
T ss_dssp             HHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            55555553    2    12 38999999985 1                1            112    22233334443


Q ss_pred             Cc---EEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHH----HHh--h--CCcEEEEecCceeeCCCCCCchHHHH
Q 018900          179 VK---QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY----ISE--N--FSNWASFRPQYMIGSGNNKDCEEWFF  247 (349)
Q Consensus       179 v~---~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~----~~~--~--~~~~~ilR~~~v~g~~~~~~~~~~~~  247 (349)
                      ..   .+|...+. ..+..   +    ....|..+|.+++.+    ..|  .  ++.+..+.||++-+.......  ...
T Consensus      2283 ~g~~~~ii~~~ss-~~g~~---g----~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~--~~~ 2352 (3089)
T 3zen_D         2283 IASRLHVVLPGSP-NRGMF---G----GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN--DAI 2352 (3089)
T ss_dssp             CCCCEEEEEEECS-STTSC---S----SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT--TTT
T ss_pred             CCceeEEEEECCc-ccccC---C----CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc--hhH
Confidence            21   23322221 11110   0    111233456554433    334  2  467788889988744321110  001


Q ss_pred             HHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc--cCCC--EEEeeCCC---ccCHHHHHHHHHH
Q 018900          248 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSN--IFNLVSDR---AVTLDGMAKLCAQ  312 (349)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--~~~~--~~~i~~~~---~~t~~el~~~~~~  312 (349)
                      .......+          ......+|+|.+++.++.....  ..+.  ..++.+|-   .++++++.+.+++
T Consensus      2353 ~~~~~~~~----------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2353 VSAVEEAG----------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             HHHHGGGS----------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             HHHHHhcC----------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence            11111111          1123789999999998875422  1112  34455653   3688988887654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.08  E-value=0.0042  Score=56.17  Aligned_cols=104  Identities=15%  Similarity=0.249  Sum_probs=66.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccceecCCCeEEEc---ChhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVSAGGKTVWG---DPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~---D~~~l~~  146 (349)
                      ++++|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+++......   ...+.. .+.+++..   +...++.
T Consensus         8 ~~~~IgiI-----G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~   81 (306)
T 3l6d_A            8 FEFDVSVI-----GLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAAL-SASPATIFVLLDNHATHE   81 (306)
T ss_dssp             CSCSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHH-HHSSEEEECCSSHHHHHH
T ss_pred             CCCeEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHH-hcCCEEEEEeCCHHHHHH
Confidence            46789999     689999999999999999999999987654332211110   111111 11222221   2333444


Q ss_pred             hhc--C----CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          147 VVG--G----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       147 ~~~--~----~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ++.  .    .+-.+||++........+.+.+.+++.|+ +|+
T Consensus        82 v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~-~~v  123 (306)
T 3l6d_A           82 VLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGG-HYV  123 (306)
T ss_dssp             HHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTC-EEE
T ss_pred             HhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            442  1    12367888888888888888888888776 555

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.07  E-value=0.0094  Score=53.06  Aligned_cols=69  Identities=13%  Similarity=0.127  Sum_probs=50.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .+++|+|+    |+ |.+|+.++..|.+.|. +|++..|+.+..+++..            .+..  ...+++.+++.+.
T Consensus       116 ~~k~vlvl----Ga-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------------~~~~--~~~~~~~~~~~~a  176 (277)
T 3don_A          116 EDAYILIL----GA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------------NINK--INLSHAESHLDEF  176 (277)
T ss_dssp             GGCCEEEE----CC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------------CCEE--ECHHHHHHTGGGC
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------------hccc--ccHhhHHHHhcCC
Confidence            56899999    75 8999999999999998 89999999876654431            1111  1345566666554


Q ss_pred             CccEEEeCCCC
Q 018900          152 TFDVVLDNNGK  162 (349)
Q Consensus       152 ~~d~Vi~~a~~  162 (349)
                        |+||++...
T Consensus       177 --DiVInaTp~  185 (277)
T 3don_A          177 --DIIINTTPA  185 (277)
T ss_dssp             --SEEEECCC-
T ss_pred             --CEEEECccC
Confidence              999987664

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.05  E-value=0.0013  Score=58.82  Aligned_cols=39  Identities=21%  Similarity=0.323  Sum_probs=33.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENS  115 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~  115 (349)
                      ..+++|||+    |+ |.+|+.++..|.+.|. +|+++.|+.++.
T Consensus       125 l~~k~vlVl----Ga-GG~g~aia~~L~~~G~~~v~i~~R~~~~a  164 (283)
T 3jyo_A          125 AKLDSVVQV----GA-GGVGNAVAYALVTHGVQKLQVADLDTSRA  164 (283)
T ss_dssp             CCCSEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSSHHHH
T ss_pred             cCCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEECCHHHH
Confidence            356899999    86 8999999999999998 799999987544

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.03  E-value=0.057  Score=50.00  Aligned_cols=93  Identities=13%  Similarity=0.187  Sum_probs=55.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHh-CCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc-ChhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~l~~~~  148 (349)
                      |+||.|.    ||+|++|+.++++|+. +++   +++.+.... ....+        ..+....+.+... |+++    +
T Consensus         1 m~kVaIv----GAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v--------~~~~g~~i~~~~~~~~~~----~   63 (367)
T 1t4b_A            1 MQNVGFI----GWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA--------PSFGGTTGTLQDAFDLEA----L   63 (367)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC--------CGGGTCCCBCEETTCHHH----H
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc--------cccCCCceEEEecCChHH----h
Confidence            4689999    9999999999995544 444   455555532 11111        1111122333332 2333    2


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i~~Ss  187 (349)
                      .+  +|+|+.+.+  ......++..+.+.|.+ .+|=.|+
T Consensus        64 ~~--~DvVf~a~g--~~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           64 KA--LDIIVTCQG--GDYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             HT--CSEEEECSC--HHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             cC--CCEEEECCC--chhHHHHHHHHHHCCCCEEEEcCCh
Confidence            34  599999988  34556777777788874 3444443

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.01  E-value=0.015  Score=54.55  Aligned_cols=97  Identities=15%  Similarity=0.207  Sum_probs=63.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-c---C-hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G---D-PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---D-~~~l~~  146 (349)
                      .+.+|||+    |+ |-+|...++.+...|. +|++++++++..+.           ....+.+.+. .   | .+.+.+
T Consensus       213 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-----------~~~lGa~~vi~~~~~~~~~~i~~  276 (404)
T 3ip1_A          213 PGDNVVIL----GG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL-----------AKELGADHVIDPTKENFVEAVLD  276 (404)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-----------HHHHTCSEEECTTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-----------HHHcCCCEEEcCCCCCHHHHHHH
Confidence            46789999    98 9999999999988998 89998877643321           1112333222 1   1 344555


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHH----HhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWA----KSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a----~~~gv~~~i~~Ss  187 (349)
                      +..+.++|+||.+.|........+++++    +..|  +++.++.
T Consensus       277 ~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G--~iv~~G~  319 (404)
T 3ip1_A          277 YTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINA--TVAIVAR  319 (404)
T ss_dssp             HTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCC--EEEECSC
T ss_pred             HhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCc--EEEEeCC
Confidence            5555568999999996533444555555    4444  7887664

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.01  E-value=0.028  Score=51.93  Aligned_cols=103  Identities=13%  Similarity=0.155  Sum_probs=58.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCC-CCCccccee--cCCCeEEEcChhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKP-PFNRFNEIV--SAGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~-~~~~~~~l~--~~~~~~~~~D~~~l~~~~  148 (349)
                      +++||.|+    |||||+|..+++.|.+.. .+++.+........++... ++..-..+.  ..+..+...|.++    +
T Consensus         6 ~~~kVaIv----GATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~----~   77 (359)
T 4dpk_A            6 RTLKAAIL----GATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL----M   77 (359)
T ss_dssp             CCEEEEET----TTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG----C
T ss_pred             CCCeEEEE----CCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH----h
Confidence            35789999    999999999999777654 4777775433222211100 000000000  0122333334433    2


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .+  +|+|+.+.+...  .+.++..+.+.|. ++|-+|+.
T Consensus        78 ~~--vDvvf~a~p~~~--s~~~a~~~~~~G~-~vIDlSa~  112 (359)
T 4dpk_A           78 DD--VDIIFSPLPQGA--AGPVEEQFAKEGF-PVISNSPD  112 (359)
T ss_dssp             TT--CCEEEECCCTTT--HHHHHHHHHHTTC-EEEECSST
T ss_pred             cC--CCEEEECCChHH--HHHHHHHHHHCCC-EEEEcCCC
Confidence            33  599999988654  3466666667786 67777764

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.01  E-value=0.028  Score=51.93  Aligned_cols=103  Identities=13%  Similarity=0.155  Sum_probs=58.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCC-CCCccccee--cCCCeEEEcChhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKP-PFNRFNEIV--SAGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~-~~~~~~~l~--~~~~~~~~~D~~~l~~~~  148 (349)
                      +++||.|+    |||||+|..+++.|.+.. .+++.+........++... ++..-..+.  ..+..+...|.++    +
T Consensus         6 ~~~kVaIv----GATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~----~   77 (359)
T 4dpl_A            6 RTLKAAIL----GATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL----M   77 (359)
T ss_dssp             CCEEEEET----TTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG----C
T ss_pred             CCCeEEEE----CCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH----h
Confidence            35789999    999999999999777654 4777775433222211100 000000000  0122333334433    2


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .+  +|+|+.+.+...  .+.++..+.+.|. ++|-+|+.
T Consensus        78 ~~--vDvvf~a~p~~~--s~~~a~~~~~~G~-~vIDlSa~  112 (359)
T 4dpl_A           78 DD--VDIIFSPLPQGA--AGPVEEQFAKEGF-PVISNSPD  112 (359)
T ss_dssp             TT--CCEEEECCCTTT--HHHHHHHHHHTTC-EEEECSST
T ss_pred             cC--CCEEEECCChHH--HHHHHHHHHHCCC-EEEEcCCC
Confidence            33  599999988654  3466666667786 67777764

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=96.00  E-value=0.017  Score=53.48  Aligned_cols=105  Identities=21%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             cceEEEEEecCCCccc-ch--HHHHHHHHHhCCCeEEEEEcCCC-CcccCCCCCCCcccceecCCCe--EE---EcC---
Q 018900           73 EKKKVLIVNTNSGGHA-VI--GFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGK--TV---WGD---  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG-~i--G~~l~~~Ll~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~~~~~--~~---~~D---  140 (349)
                      |++||+|+   +|||| .+  +..|+++|.++||+|+.++.... ..+-+....+ .+..+...++.  ..   ...   
T Consensus         1 M~~~i~i~---~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~-~~~~i~~~~~~~~~~~~~~~~~~~   76 (365)
T 3s2u_A            1 MKGNVLIM---AGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGL-PLHLIQVSGLRGKGLKSLVKAPLE   76 (365)
T ss_dssp             --CEEEEE---CCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTC-CEEECC--------------CHHH
T ss_pred             CCCcEEEE---cCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCC-cEEEEECCCcCCCCHHHHHHHHHH
Confidence            56788888   24453 33  56788999999999998874321 0000100000 01111111100  00   001   


Q ss_pred             ----hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          141 ----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       141 ----~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                          ......+++..++|+||...+.-   ....+-+|+..|++-+++
T Consensus        77 ~~~~~~~~~~~l~~~~PDvVi~~g~~~---s~p~~laA~~~~iP~vih  121 (365)
T 3s2u_A           77 LLKSLFQALRVIRQLRPVCVLGLGGYV---TGPGGLAARLNGVPLVIH  121 (365)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEECSSST---HHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEcCCcc---hHHHHHHHHHcCCCEEEE
Confidence                12234456677899999887742   122344566677766665

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=95.99  E-value=0.019  Score=51.36  Aligned_cols=92  Identities=18%  Similarity=0.178  Sum_probs=60.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +.++|+|+    |++|..|+.+++.|++.|++++..+.......           +  ..++.++ .+   ++++.....
T Consensus         6 ~~~~VaVv----GasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~-----------~--i~G~~vy-~s---l~el~~~~~   64 (288)
T 1oi7_A            6 RETRVLVQ----GITGREGQFHTKQMLTYGTKIVAGVTPGKGGM-----------E--VLGVPVY-DT---VKEAVAHHE   64 (288)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC-----------E--ETTEEEE-SS---HHHHHHHSC
T ss_pred             CCCEEEEE----CCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc-----------e--ECCEEee-CC---HHHHhhcCC
Confidence            45789999    99999999999999998999554433221110           1  1133322 23   444444234


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +|++|.+..  -..+..+++.|.+.|++.+|.+++
T Consensus        65 ~Dv~Ii~vp--~~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           65 VDASIIFVP--APAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             CSEEEECCC--HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEecC--HHHHHHHHHHHHHCCCCEEEEECC
Confidence            699987765  456778888888889876776654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=95.96  E-value=0.0013  Score=52.30  Aligned_cols=71  Identities=15%  Similarity=0.182  Sum_probs=47.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..++|+|+    | +|.+|+.+++.|.+.|++|++.+|+.+..+++.        +.  .+++..  ..+++.+.+.+. 
T Consensus        20 ~~~~v~ii----G-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a--------~~--~~~~~~--~~~~~~~~~~~~-   81 (144)
T 3oj0_A           20 GGNKILLV----G-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFA--------EK--YEYEYV--LINDIDSLIKNN-   81 (144)
T ss_dssp             CCCEEEEE----C-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHH--------HH--HTCEEE--ECSCHHHHHHTC-
T ss_pred             cCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHH--------HH--hCCceE--eecCHHHHhcCC-
Confidence            37899999    7 599999999999999999999999875443211        00  022222  223445555554 


Q ss_pred             ccEEEeCCCC
Q 018900          153 FDVVLDNNGK  162 (349)
Q Consensus       153 ~d~Vi~~a~~  162 (349)
                       |+||.+.+.
T Consensus        82 -Divi~at~~   90 (144)
T 3oj0_A           82 -DVIITATSS   90 (144)
T ss_dssp             -SEEEECSCC
T ss_pred             -CEEEEeCCC
Confidence             888887764

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=95.95  E-value=0.071  Score=48.27  Aligned_cols=93  Identities=10%  Similarity=0.075  Sum_probs=58.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhh----h
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV----V  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~----~  148 (349)
                      .|+||.|+    |..|++|...++.|.+.+.+++++....+.....        ... ..+. -...|.+++.+.    .
T Consensus         2 ~mirvgiI----G~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~--------~~~-~~~~-~~~~~~~~ll~~~~~l~   67 (318)
T 3oa2_A            2 HMKNFALI----GAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGII--------DSI-SPQS-EFFTEFEFFLDHASNLK   67 (318)
T ss_dssp             -CCEEEEE----TTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGG--------GGT-CTTC-EEESSHHHHHHHHHHHT
T ss_pred             CceEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHH--------Hhh-CCCC-cEECCHHHHHHhhhhhh
Confidence            47899999    8889999999999998888877776433222111        100 0122 234455554321    1


Q ss_pred             --cCCCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          149 --GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       149 --~~~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                        .+..+|+|+-+..                         .+....+.+++++++.|+
T Consensus        68 ~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~  125 (318)
T 3oa2_A           68 RDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDK  125 (318)
T ss_dssp             TSTTTSCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTC
T ss_pred             hccCCCCcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCC
Confidence              2445899986655                         356667778888877775

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.95  E-value=0.0049  Score=56.27  Aligned_cols=97  Identities=23%  Similarity=0.316  Sum_probs=62.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCccc----CCCCCCCcccceecCCCeEEEcChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDK----MKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~  147 (349)
                      ++||.|+    |+ |++|..++..|+..|+  +|++++++++..+.    +...    + .+...++++..+|.    +.
T Consensus         5 ~~kI~Vi----Ga-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~----~-~~~~~~v~i~~~~~----~a   70 (326)
T 3pqe_A            5 VNKVALI----GA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG----K-AFAPQPVKTSYGTY----ED   70 (326)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT----G-GGSSSCCEEEEECG----GG
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc----c-ccccCCeEEEeCcH----HH
Confidence            5789999    85 9999999999999886  89999987643322    1100    0 01112344444443    34


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                      +++.  |+||.++|.              |....+.+++.+.+..- ..++.+|
T Consensus        71 ~~~a--DvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           71 CKDA--DIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             GTTC--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hCCC--CEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            5565  999999984              33446777777777653 3555555

>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*

Probab=95.94  E-value=0.031  Score=47.54  Aligned_cols=97  Identities=18%  Similarity=0.153  Sum_probs=67.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHH--HhCCCeEEEEEcCCCC-cccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKEL--LGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~L--l~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      .+.+|+|+    | .|.+|+.+++++  .+.|++++++....+. ...  .      ..  -.++.+.  +.+++.++++
T Consensus        83 ~~~~V~Iv----G-aG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG--~------~~--i~GvpV~--~~~dL~~~v~  145 (212)
T 3keo_A           83 STTNVMLV----G-CGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVG--K------TT--EDGIPVY--GISTINDHLI  145 (212)
T ss_dssp             SCEEEEEE----C-CSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTT--C------BC--TTCCBEE--EGGGHHHHC-
T ss_pred             CCCEEEEE----C-cCHHHHHHHHhhhcccCCeEEEEEEeCCchhccC--c------ee--ECCeEEe--CHHHHHHHHH
Confidence            46789999    5 599999999984  3457887776644322 110  0      00  1245555  3688999999


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..++|.+|-+....  ..+.+++.+.++|++-++.++-.
T Consensus       146 ~~~Id~vIIAvPs~--~aq~v~d~lv~~GIk~I~nFap~  182 (212)
T 3keo_A          146 DSDIETAILTVPST--EAQEVADILVKAGIKGILSFSPV  182 (212)
T ss_dssp             CCSCCEEEECSCGG--GHHHHHHHHHHHTCCEEEECSSS
T ss_pred             HcCCCEEEEecCch--hHHHHHHHHHHcCCCEEEEcCCc
Confidence            88899999887533  35689999999999999877753

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=95.94  E-value=0.017  Score=52.36  Aligned_cols=104  Identities=13%  Similarity=0.032  Sum_probs=64.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCC-------CcccCCCCC-CC-cccceecCCCeEEEc---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDE-------NSDKMKKPP-FN-RFNEIVSAGGKTVWG---  139 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~-------~~~~~~~~~-~~-~~~~l~~~~~~~~~~---  139 (349)
                      |+|+|.|+     |.|.+|..+++.|.+.| ++|++.+|+++       ..+.+.... .. ...+.. .+.+++..   
T Consensus        23 M~m~IgvI-----G~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~-~~aDvVi~avp   96 (317)
T 4ezb_A           23 MMTTIAFI-----GFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGI-ACADVVLSLVV   96 (317)
T ss_dssp             SCCEEEEE-----CCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGG-GGCSEEEECCC
T ss_pred             cCCeEEEE-----CccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHH-hcCCEEEEecC
Confidence            66899999     58999999999999999 99999999862       111110000 00 111111 12222221   


Q ss_pred             C---hhhHHhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          140 D---PAEVGNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       140 D---~~~l~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +   .+.+..+....+ -.+||++.+......+.+.+.+++.|+ +|+
T Consensus        97 ~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~-~~~  143 (317)
T 4ezb_A           97 GAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKG-SFV  143 (317)
T ss_dssp             GGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSC-EEE
T ss_pred             CHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            1   223333333222 367888888888888888888887776 454

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.88  E-value=0.01  Score=54.04  Aligned_cols=100  Identities=19%  Similarity=0.145  Sum_probs=57.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++||.|+    |+ |++|..++..|+..|.  +|+.++.+++..+........... +. ..+++..+|    .+.+++.
T Consensus         7 ~~KI~Ii----Ga-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~-~~~~i~~~~----~~a~~~a   75 (318)
T 1y6j_A            7 RSKVAII----GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FM-GQMSLYAGD----YSDVKDC   75 (318)
T ss_dssp             CCCEEEE----CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CT-TCEEEC--C----GGGGTTC
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hc-CCeEEEECC----HHHhCCC
Confidence            4689999    87 9999999999999987  999999886544321000000000 00 122222222    3346665


Q ss_pred             CccEEEeCCCCC--------------hhhHHHHHHHHHhCCC-cEEEEec
Q 018900          152 TFDVVLDNNGKN--------------LDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       152 ~~d~Vi~~a~~~--------------~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                        |+||.+++..              ....+.+++.+.+..- ..+|.+|
T Consensus        76 --DvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           76 --DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             --SEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             --CEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence              9999999853              2335667776666443 3444443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.87  E-value=0.0051  Score=56.34  Aligned_cols=94  Identities=16%  Similarity=0.140  Sum_probs=60.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--c--C-hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--G--D-PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~--D-~~~l~~~  147 (349)
                      .+++|||+    |+ |.+|..+++.+...|.+|++++|+++..+..           ...+.+.+.  .  | .+.+.++
T Consensus       164 ~g~~VlV~----Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~~~d~~~~~~~~~~~~~  227 (339)
T 1rjw_A          164 PGEWVAIY----GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-----------KELGADLVVNPLKEDAAKFMKEK  227 (339)
T ss_dssp             TTCEEEEE----CC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCSEEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HHCCCCEEecCCCccHHHHHHHH
Confidence            46799999    99 7799999999999999999999876443211           111222221  1  1 1233333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .  .++|+||++++.. ......+++++..|  +++.++.
T Consensus       228 ~--~~~d~vid~~g~~-~~~~~~~~~l~~~G--~~v~~g~  262 (339)
T 1rjw_A          228 V--GGVHAAVVTAVSK-PAFQSAYNSIRRGG--ACVLVGL  262 (339)
T ss_dssp             H--SSEEEEEESSCCH-HHHHHHHHHEEEEE--EEEECCC
T ss_pred             h--CCCCEEEECCCCH-HHHHHHHHHhhcCC--EEEEecc
Confidence            3  2479999999842 33455566665544  7887764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.85  E-value=0.0067  Score=54.62  Aligned_cols=74  Identities=12%  Similarity=0.166  Sum_probs=50.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCC-eEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~~~l~~~~~~  150 (349)
                      .+++|+|+    |+ |.+|+.++..|.+.|. +|++..|+.+..+++...       +. ... ++  .+.+++.+.+.+
T Consensus       140 ~~~~vlVl----Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~-------~~-~~~~~~--~~~~~~~~~~~~  204 (297)
T 2egg_A          140 DGKRILVI----GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE-------GD-ERRSAY--FSLAEAETRLAE  204 (297)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH-------SC-SSSCCE--ECHHHHHHTGGG
T ss_pred             CCCEEEEE----Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-------hh-hccCce--eeHHHHHhhhcc
Confidence            56899999    76 7899999999999997 999999987554322110       00 000 11  134556666655


Q ss_pred             CCccEEEeCCCCC
Q 018900          151 VTFDVVLDNNGKN  163 (349)
Q Consensus       151 ~~~d~Vi~~a~~~  163 (349)
                      .  |+||++.+..
T Consensus       205 a--DivIn~t~~~  215 (297)
T 2egg_A          205 Y--DIIINTTSVG  215 (297)
T ss_dssp             C--SEEEECSCTT
T ss_pred             C--CEEEECCCCC
Confidence            4  9999988754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=95.82  E-value=0.012  Score=54.50  Aligned_cols=95  Identities=21%  Similarity=0.317  Sum_probs=62.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE--EEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT--VWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~D~~~l~~~~~~  150 (349)
                      .+.+|||+    |+ |-+|..+++.+...|.+|++++++++..+...          ...+.+.  ...|.+.+.++.. 
T Consensus       187 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----------~~lGa~~v~~~~~~~~~~~~~~-  250 (366)
T 1yqd_A          187 PGKHIGIV----GL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL----------KNFGADSFLVSRDQEQMQAAAG-  250 (366)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH----------HTSCCSEEEETTCHHHHHHTTT-
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----------HhcCCceEEeccCHHHHHHhhC-
Confidence            56799999    86 99999999999999999999998765432111          0112221  1223445555543 


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       ++|+||++++... .....++.++..|  ++|.++.
T Consensus       251 -~~D~vid~~g~~~-~~~~~~~~l~~~G--~iv~~g~  283 (366)
T 1yqd_A          251 -TLDGIIDTVSAVH-PLLPLFGLLKSHG--KLILVGA  283 (366)
T ss_dssp             -CEEEEEECCSSCC-CSHHHHHHEEEEE--EEEECCC
T ss_pred             -CCCEEEECCCcHH-HHHHHHHHHhcCC--EEEEEcc
Confidence             4799999998542 2345556665544  7887775

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=95.80  E-value=0.015  Score=55.84  Aligned_cols=106  Identities=17%  Similarity=0.214  Sum_probs=66.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC--------CCcccceecC--CCeEEEc---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--------FNRFNEIVSA--GGKTVWG---  139 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~--------~~~~~~l~~~--~~~~~~~---  139 (349)
                      .+++|.|+     |.|.+|..+++.|.+.||+|++.+|+++..+++....        .....++...  +.+++..   
T Consensus         3 ~~~kIgiI-----GlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp   77 (484)
T 4gwg_A            3 AQADIALI-----GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK   77 (484)
T ss_dssp             CCBSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCEEEEE-----ChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence            46789999     5899999999999999999999999886554432110        0111222210  2232221   


Q ss_pred             Chhh----HHhhhcCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          140 DPAE----VGNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       140 D~~~----l~~~~~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      +...    ++.+.... +-++||++.......+..+.+.+++.|+ +|+-
T Consensus        78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi-~fvd  126 (484)
T 4gwg_A           78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGI-LFVG  126 (484)
T ss_dssp             SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcc-cccc
Confidence            1112    22222222 2478888888888788888888888776 5554

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.79  E-value=0.011  Score=52.49  Aligned_cols=40  Identities=18%  Similarity=0.162  Sum_probs=34.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSD  116 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~  116 (349)
                      ..+++++|+    |+ |.+|+.++..|.+.|. +|++..|+.++.+
T Consensus       118 l~~k~~lvl----Ga-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~  158 (272)
T 3pwz_A          118 LRNRRVLLL----GA-GGAVRGALLPFLQAGPSELVIANRDMAKAL  158 (272)
T ss_dssp             CTTSEEEEE----CC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHH
T ss_pred             ccCCEEEEE----Cc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            357899999    76 7899999999999995 9999999876544

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.78  E-value=0.0045  Score=53.12  Aligned_cols=80  Identities=16%  Similarity=0.164  Sum_probs=51.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEE-EEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~-l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      +||+|.|+    | .|.+|..+++.|.+.|++|++ .+|+++..+++..          ..++.....+.+.    +.+.
T Consensus        22 ~mmkI~II----G-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~----------~~g~~~~~~~~~~----~~~a   82 (220)
T 4huj_A           22 SMTTYAII----G-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD----------RFGASVKAVELKD----ALQA   82 (220)
T ss_dssp             GSCCEEEE----E-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH----------HHTTTEEECCHHH----HTTS
T ss_pred             cCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH----------HhCCCcccChHHH----HhcC
Confidence            46799999    5 999999999999999999999 7887655432110          0133333323322    3443


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHH
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAK  175 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~  175 (349)
                        |+||-+..  ......+++.++
T Consensus        83 --DvVilavp--~~~~~~v~~~l~  102 (220)
T 4huj_A           83 --DVVILAVP--YDSIADIVTQVS  102 (220)
T ss_dssp             --SEEEEESC--GGGHHHHHTTCS
T ss_pred             --CEEEEeCC--hHHHHHHHHHhh
Confidence              99988764  344555555443

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.75  E-value=0.062  Score=51.18  Aligned_cols=149  Identities=15%  Similarity=0.169  Sum_probs=81.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc--C---h-hh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D---P-AE  143 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D---~-~~  143 (349)
                      ++||||+    | .|.+|+.++..|.++ ++   +|++.+......+ +        .+..  ++++...  |   . +.
T Consensus        13 ~~rVlII----G-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-~--------~~~~--g~~~~~~~Vdadnv~~~   76 (480)
T 2ph5_A           13 KNRFVIL----G-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-V--------AQQY--GVSFKLQQITPQNYLEV   76 (480)
T ss_dssp             CSCEEEE----C-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-H--------HHHH--TCEEEECCCCTTTHHHH
T ss_pred             CCCEEEE----C-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-H--------Hhhc--CCceeEEeccchhHHHH
Confidence            4679999    6 999999999999886 44   6888876543221 0        1111  2333322  2   3 33


Q ss_pred             HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCC
Q 018900          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS  223 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~  223 (349)
                      +.+++++  .|+||+.+-  ......++++|.+.|+ ++  +.++..  ... .............+-|.....+++...
T Consensus        77 l~aLl~~--~DvVIN~s~--~~~~l~Im~acleaGv-~Y--lDTa~E--~~~-p~~~~~~~~p~~~~~Y~~~~~~~~~~~  146 (480)
T 2ph5_A           77 IGSTLEE--NDFLIDVSI--GISSLALIILCNQKGA-LY--INAATE--PWK-EEFVMEKMALNRRTNYSLREEVLRLKD  146 (480)
T ss_dssp             TGGGCCT--TCEEEECCS--SSCHHHHHHHHHHHTC-EE--EESSCC--CCC-C----------CCCHHHHHHHHHTTTT
T ss_pred             HHHHhcC--CCEEEECCc--cccCHHHHHHHHHcCC-CE--EECCCC--ccc-ccccccccCcchhhhHHHHHHHHHHHH
Confidence            5667776  399998664  3356789999999997 33  344321  000 000000000112244554444443321


Q ss_pred             cEEEEecCceeeCCCCCCchHHHHHHHH
Q 018900          224 NWASFRPQYMIGSGNNKDCEEWFFDRIV  251 (349)
Q Consensus       224 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~  251 (349)
                      ...  - ..+.|-|.+++++..+...++
T Consensus       147 ~~~--G-tAilg~G~nPGvvsvf~~~Al  171 (480)
T 2ph5_A          147 KTQ--K-TALITHGANPGLVSHFIKEAL  171 (480)
T ss_dssp             TCC--S-CEECSCBTTTBHHHHHHHHHH
T ss_pred             hcC--C-cEEecCCCCccHHHHHHHHHH
Confidence            111  1 456777888888888775444

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.75  E-value=0.0084  Score=54.53  Aligned_cols=92  Identities=18%  Similarity=0.230  Sum_probs=57.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cCh--hhHHhhhcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDP--AEVGNVVGGV  151 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D~--~~l~~~~~~~  151 (349)
                      +|||+    |++|-+|...++.+...|.+|++++++++..+..+           ..+.+.+.  .+.  +.+.+ +.+.
T Consensus       152 ~VlV~----Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-----------~lGa~~~i~~~~~~~~~~~~-~~~~  215 (328)
T 1xa0_A          152 PVLVT----GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-----------VLGAKEVLAREDVMAERIRP-LDKQ  215 (328)
T ss_dssp             CEEES----STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-----------HTTCSEEEECC----------CCSC
T ss_pred             eEEEe----cCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HcCCcEEEecCCcHHHHHHH-hcCC
Confidence            79999    99999999999999999999999999865443221           11222211  111  11222 2223


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ++|+||++++..  .....++.++..|  +++.++.
T Consensus       216 ~~d~vid~~g~~--~~~~~~~~l~~~G--~~v~~G~  247 (328)
T 1xa0_A          216 RWAAAVDPVGGR--TLATVLSRMRYGG--AVAVSGL  247 (328)
T ss_dssp             CEEEEEECSTTT--THHHHHHTEEEEE--EEEECSC
T ss_pred             cccEEEECCcHH--HHHHHHHhhccCC--EEEEEee
Confidence            589999999863  4455555555444  7887654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.69  E-value=0.1  Score=47.66  Aligned_cols=105  Identities=11%  Similarity=0.169  Sum_probs=65.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      ....+|||+     |.|.+|.++++.|...|. ++++++++.-....+..+.+....++              ..+++++
T Consensus        32 L~~~~VlIv-----GaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v  106 (340)
T 3rui_A           32 IKNTKVLLL-----GAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA  106 (340)
T ss_dssp             HHTCEEEEE-----CCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEE
T ss_pred             HhCCEEEEE-----CCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEE
Confidence            356799999     679999999999999996 78888887644433333322111111              1234443


Q ss_pred             EEcC-------------------hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEe
Q 018900          137 VWGD-------------------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       137 ~~~D-------------------~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                      ...+                   .+.+.+++.++  |+||++.. |...-..+-++|.+.++ .+|..
T Consensus       107 ~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~--DlVvd~tD-n~~tR~lin~~c~~~~~-plI~a  170 (340)
T 3rui_A          107 TGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEH--DIIFLLVD-SRESRWLPSLLSNIENK-TVINA  170 (340)
T ss_dssp             EEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHC--SEEEECCS-STGGGHHHHHHHHHTTC-EEEEE
T ss_pred             EEEeccccccCcccchhhhhcCCHHHHHhhhccC--CEEEecCC-CHHHHHHHHHHHHHcCC-cEEEe
Confidence            3221                   23456677665  99999866 44444455668888775 56653

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.68  E-value=0.037  Score=52.76  Aligned_cols=90  Identities=24%  Similarity=0.272  Sum_probs=59.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++++|+|+    |. |-.|..+++.|.++|++|++.+++.....       .....+...++++..+...+  ..+.+ .
T Consensus         8 ~~k~v~vi----G~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~-------~~~~~L~~~gi~~~~g~~~~--~~~~~-~   72 (451)
T 3lk7_A            8 ENKKVLVL----GL-ARSGEAAARLLAKLGAIVTVNDGKPFDEN-------PTAQSLLEEGIKVVCGSHPL--ELLDE-D   72 (451)
T ss_dssp             TTCEEEEE----CC-TTTHHHHHHHHHHTTCEEEEEESSCGGGC-------HHHHHHHHTTCEEEESCCCG--GGGGS-C
T ss_pred             CCCEEEEE----ee-CHHHHHHHHHHHhCCCEEEEEeCCcccCC-------hHHHHHHhCCCEEEECCChH--HhhcC-C
Confidence            46899999    76 88999999999999999999998653211       01234555688887765321  23333 1


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +|.||...|+..+-  ..+..+++.|+
T Consensus        73 ~d~vv~spgi~~~~--p~~~~a~~~gi   97 (451)
T 3lk7_A           73 FCYMIKNPGIPYNN--PMVKKALEKQI   97 (451)
T ss_dssp             EEEEEECTTSCTTS--HHHHHHHHTTC
T ss_pred             CCEEEECCcCCCCC--hhHHHHHHCCC
Confidence            59999988864332  23445555443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.68  E-value=0.017  Score=51.73  Aligned_cols=93  Identities=15%  Similarity=0.180  Sum_probs=61.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..+++|+|+    | .|.+|+.+++.|...|.+|++.+|..+....           +...+++.+  +.+++++++.+.
T Consensus       153 l~g~~v~Ii----G-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~-----------~~~~g~~~~--~~~~l~~~l~~a  214 (293)
T 3d4o_A          153 IHGANVAVL----G-LGRVGMSVARKFAALGAKVKVGARESDLLAR-----------IAEMGMEPF--HISKAAQELRDV  214 (293)
T ss_dssp             STTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-----------HHHTTSEEE--EGGGHHHHTTTC
T ss_pred             CCCCEEEEE----e-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-----------HHHCCCeec--ChhhHHHHhcCC
Confidence            357899999    5 7999999999999999999999997643211           111234332  345677777665


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                        |+|+.+....+... ..++.++. + ..+|.++.
T Consensus       215 --DvVi~~~p~~~i~~-~~l~~mk~-~-~~lin~ar  245 (293)
T 3d4o_A          215 --DVCINTIPALVVTA-NVLAEMPS-H-TFVIDLAS  245 (293)
T ss_dssp             --SEEEECCSSCCBCH-HHHHHSCT-T-CEEEECSS
T ss_pred             --CEEEECCChHHhCH-HHHHhcCC-C-CEEEEecC
Confidence              99998877544332 34444443 2 35666654

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}

Probab=95.67  E-value=0.071  Score=41.73  Aligned_cols=96  Identities=21%  Similarity=0.179  Sum_probs=66.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ..++|+|+     |+|..|..+++.|.+. ||+|+++.........         ..  ..++.++ + .+++.+.+...
T Consensus         3 ~~~~vlIi-----GaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g---------~~--i~g~pV~-g-~~~l~~~~~~~   64 (141)
T 3nkl_A            3 AKKKVLIY-----GAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHK---------TT--MQGITIY-R-PKYLERLIKKH   64 (141)
T ss_dssp             CCEEEEEE-----CCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTT---------CE--ETTEEEE-C-GGGHHHHHHHH
T ss_pred             CCCEEEEE-----CCCHHHHHHHHHHHhCCCcEEEEEEECCcccCC---------CE--ecCeEEE-C-HHHHHHHHHHC
Confidence            35789999     5688999999999875 8999988765422110         01  1244443 4 67788887776


Q ss_pred             CccEEEeCCCC-ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          152 TFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~-~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ++|.|+-+.+. .-.....+++.|++.|++ +..+-+
T Consensus        65 ~id~viia~~~~~~~~~~~i~~~l~~~gv~-v~~vP~  100 (141)
T 3nkl_A           65 CISTVLLAVPSASQVQKKVIIESLAKLHVE-VLTIPN  100 (141)
T ss_dssp             TCCEEEECCTTSCHHHHHHHHHHHHTTTCE-EEECCC
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHHHHHcCCe-EEECCC
Confidence            67888776553 345678899999999984 554443

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=95.66  E-value=0.028  Score=50.28  Aligned_cols=92  Identities=13%  Similarity=0.109  Sum_probs=59.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +.+||.|+    |++|.+|+.+++.|.+.|+++++.+.......           +  ..++.+ .   .+++++.....
T Consensus         6 ~~~rVaVi----G~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~-----------~--~~G~~v-y---~sl~el~~~~~   64 (288)
T 2nu8_A            6 KNTKVICQ----GFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT-----------T--HLGLPV-F---NTVREAVAATG   64 (288)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC-----------E--ETTEEE-E---SSHHHHHHHHC
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCCcccc-----------e--eCCeec-c---CCHHHHhhcCC
Confidence            45789999    99999999999999988998654443221101           1  113332 2   23444444223


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +|+++-+...  .....+++.|.+.|++.+|.+++
T Consensus        65 ~D~viI~tP~--~~~~~~~~ea~~~Gi~~iVi~t~   97 (288)
T 2nu8_A           65 ATASVIYVPA--PFCKDSILEAIDAGIKLIITITE   97 (288)
T ss_dssp             CCEEEECCCG--GGHHHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEecCH--HHHHHHHHHHHHCCCCEEEEECC
Confidence            6999887663  46677788888889876665554

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=95.66  E-value=0.063  Score=49.88  Aligned_cols=106  Identities=12%  Similarity=0.106  Sum_probs=56.8

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCC-CCcccCCCC-CCCccccee--cCCCeEEEcChhhHH
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD-ENSDKMKKP-PFNRFNEIV--SAGGKTVWGDPAEVG  145 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~-~~~~~~~~~-~~~~~~~l~--~~~~~~~~~D~~~l~  145 (349)
                      .++++||.|+    ||||++|..+++.|.++. .++..+.-+. ....++... ++..-..+.  ..+..+...|.++  
T Consensus        16 ~M~~~kVaIv----GAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~--   89 (381)
T 3hsk_A           16 HMSVKKAGVL----GATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEG--   89 (381)
T ss_dssp             --CCEEEEEE----TTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT--
T ss_pred             cCCccEEEEE----CCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhh--
Confidence            3456799999    999999999999887765 4676554222 111111000 000000000  0122222223220  


Q ss_pred             hhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                       .+.+  +|+|+.+.+..  ....++..+.+.|. ++|=.|+.
T Consensus        90 -~~~~--~Dvvf~alp~~--~s~~~~~~~~~~G~-~VIDlSa~  126 (381)
T 3hsk_A           90 -NFLE--CDVVFSGLDAD--VAGDIEKSFVEAGL-AVVSNAKN  126 (381)
T ss_dssp             -TGGG--CSEEEECCCHH--HHHHHHHHHHHTTC-EEEECCST
T ss_pred             -hccc--CCEEEECCChh--HHHHHHHHHHhCCC-EEEEcCCc
Confidence             1333  49999998743  34566677777786 57777763

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=95.61  E-value=0.017  Score=53.36  Aligned_cols=94  Identities=22%  Similarity=0.281  Sum_probs=60.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~l~~~  147 (349)
                      .+.+|||+    ||+|-+|...++.+.. .|.+|+++++++++.+.           +...+.+.+...    .+.+.++
T Consensus       171 ~g~~VlV~----Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~-----------~~~lGad~vi~~~~~~~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIV----GGAGGVGSIAVQIARQRTDLTVIATASRPETQEW-----------VKSLGAHHVIDHSKPLAAEVAAL  235 (363)
T ss_dssp             SEEEEEEE----STTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH-----------HHHTTCSEEECTTSCHHHHHHTT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH-----------HHHcCCCEEEeCCCCHHHHHHHh
Confidence            56789999    9999999999888776 68999999987643321           112233333221    2233333


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEe
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                       .+.++|+|+++.+.. ......+++++..|  +++.+
T Consensus       236 -~~~g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~  269 (363)
T 4dvj_A          236 -GLGAPAFVFSTTHTD-KHAAEIADLIAPQG--RFCLI  269 (363)
T ss_dssp             -CSCCEEEEEECSCHH-HHHHHHHHHSCTTC--EEEEC
T ss_pred             -cCCCceEEEECCCch-hhHHHHHHHhcCCC--EEEEE
Confidence             333589999998832 23345555555544  78866

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.59  E-value=0.013  Score=53.94  Aligned_cols=88  Identities=18%  Similarity=0.183  Sum_probs=56.4

Q ss_pred             cceEEEEEecCCCcccchHH-HHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGF-YLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~-~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +++||.|+     |.|.+|+ ..++.|.+. +.+|+++ +|+++..+++.        +  ..++..+    .++++++.
T Consensus        26 ~~~rigiI-----G~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--------~--~~g~~~~----~~~~~ll~   86 (350)
T 3rc1_A           26 NPIRVGVI-----GCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFT--------E--RFGGEPV----EGYPALLE   86 (350)
T ss_dssp             CCEEEEEE-----SCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHH--------H--HHCSEEE----ESHHHHHT
T ss_pred             CceEEEEE-----cCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHH--------H--HcCCCCc----CCHHHHhc
Confidence            45799999     5799998 788888876 7787755 56554332111        0  1133333    44556666


Q ss_pred             CCCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          150 GVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       150 ~~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      ..++|+|+-+..                         .+++....+++++++.|+
T Consensus        87 ~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~  141 (350)
T 3rc1_A           87 RDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGL  141 (350)
T ss_dssp             CTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence            555788886544                         355667777777777775

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.59  E-value=0.018  Score=53.07  Aligned_cols=92  Identities=15%  Similarity=0.148  Sum_probs=60.3

Q ss_pred             eEEEEEecCCCcccchHHHH-HHHH-HhCCCe-EEEEEcCCC---CcccCCCCCCCcccceecCCCeEEEc---ChhhHH
Q 018900           75 KKVLIVNTNSGGHAVIGFYL-AKEL-LGSGHE-VTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVG  145 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l-~~~L-l~~g~~-V~~l~R~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~  145 (349)
                      .+|||+    |+ |-+|... ++.+ ...|.+ |++++++++   +.+.           +...+.+.+..   |..++.
T Consensus       174 ~~VlV~----Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~-----------~~~lGa~~v~~~~~~~~~i~  237 (357)
T 2b5w_A          174 SSAFVL----GN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI-----------IEELDATYVDSRQTPVEDVP  237 (357)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH-----------HHHTTCEEEETTTSCGGGHH
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH-----------HHHcCCcccCCCccCHHHHH
Confidence            899999    99 9999999 8887 778987 999999775   3321           11224443311   111144


Q ss_pred             hhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ++ .+ ++|+||++.+.. ......++.++..|  +++.++.
T Consensus       238 ~~-~g-g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~g~  274 (357)
T 2b5w_A          238 DV-YE-QMDFIYEATGFP-KHAIQSVQALAPNG--VGALLGV  274 (357)
T ss_dssp             HH-SC-CEEEEEECSCCH-HHHHHHHHHEEEEE--EEEECCC
T ss_pred             Hh-CC-CCCEEEECCCCh-HHHHHHHHHHhcCC--EEEEEeC
Confidence            44 44 689999999843 23445566665544  7887764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=95.59  E-value=0.0076  Score=55.81  Aligned_cols=93  Identities=18%  Similarity=0.206  Sum_probs=58.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC---CCcccCCCCCCCcccceecCCCeEEEc-C-hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWG-D-PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~-D-~~~l~~~~  148 (349)
                      +++|||+    |+ |.+|..+++.+...|.+|++++|+.   +..+.           +...+.+.+.. | .+.+.+ .
T Consensus       181 g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----------~~~~ga~~v~~~~~~~~~~~-~  243 (366)
T 2cdc_A          181 CRKVLVV----GT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-----------IEETKTNYYNSSNGYDKLKD-S  243 (366)
T ss_dssp             TCEEEEE----SC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-----------HHHHTCEEEECTTCSHHHHH-H
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-----------HHHhCCceechHHHHHHHHH-h
Confidence            7899999    99 9999999999998999999999976   43321           11123333311 1 122333 2


Q ss_pred             cCCCccEEEeCCCCChhhH-HHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~-~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      . .++|+||++++... .. ...++.++..  .++|.++.
T Consensus       244 ~-~~~d~vid~~g~~~-~~~~~~~~~l~~~--G~iv~~g~  279 (366)
T 2cdc_A          244 V-GKFDVIIDATGADV-NILGNVIPLLGRN--GVLGLFGF  279 (366)
T ss_dssp             H-CCEEEEEECCCCCT-HHHHHHGGGEEEE--EEEEECSC
T ss_pred             C-CCCCEEEECCCChH-HHHHHHHHHHhcC--CEEEEEec
Confidence            2 34799999998531 22 4444544443  37887764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.55  E-value=0.0075  Score=54.70  Aligned_cols=35  Identities=23%  Similarity=0.227  Sum_probs=31.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~  112 (349)
                      .++++||+    |+ |.+|+.++..|.+.|. +|+++.|+.
T Consensus       153 ~gk~~lVl----Ga-GG~g~aia~~L~~~Ga~~V~i~nR~~  188 (315)
T 3tnl_A          153 IGKKMTIC----GA-GGAATAICIQAALDGVKEISIFNRKD  188 (315)
T ss_dssp             TTSEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             cCCEEEEE----CC-ChHHHHHHHHHHHCCCCEEEEEECCC
Confidence            56899999    86 8999999999999998 899999983

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=95.54  E-value=0.043  Score=52.62  Aligned_cols=37  Identities=16%  Similarity=0.158  Sum_probs=34.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhC-CC-eEEEEEcCCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GH-EVTIMTVGDE  113 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~-~V~~l~R~~~  113 (349)
                      .++|+|.|+     |.|++|..++..|.+. || +|++++|+++
T Consensus        16 ~~~mkIaVI-----GlG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           16 GPIKKIGVL-----GMGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CSCCEEEEE-----CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCCEEEEE-----CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            356799999     7999999999999999 99 9999999987

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=95.53  E-value=0.044  Score=42.26  Aligned_cols=100  Identities=18%  Similarity=0.180  Sum_probs=56.7

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC----hhhHH
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~l~  145 (349)
                      .+++|.|+    |++   +..|..+.+.|++.||+|+.+..+.+.....+  -...+.++...++-++...    ++-++
T Consensus         3 ~p~siAVV----GaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~--~y~sl~dlp~vDlavi~~p~~~v~~~v~   76 (122)
T 3ff4_A            3 AMKKTLIL----GATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKT--IINERPVIEGVDTVTLYINPQNQLSEYN   76 (122)
T ss_dssp             CCCCEEEE----TCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEE--CBCSCCCCTTCCEEEECSCHHHHGGGHH
T ss_pred             CCCEEEEE----ccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCee--ccCChHHCCCCCEEEEEeCHHHHHHHHH
Confidence            35789999    998   56899999999999999888765543332211  1112223322111122222    22333


Q ss_pred             hhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ++.+. ++-.|+...|..   ...+++.|+++|+ |++
T Consensus        77 e~~~~-g~k~v~~~~G~~---~~e~~~~a~~~Gi-rvv  109 (122)
T 3ff4_A           77 YILSL-KPKRVIFNPGTE---NEELEEILSENGI-EPV  109 (122)
T ss_dssp             HHHHH-CCSEEEECTTCC---CHHHHHHHHHTTC-EEE
T ss_pred             HHHhc-CCCEEEECCCCC---hHHHHHHHHHcCC-eEE
Confidence            33321 234555555542   3577888888887 565

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=95.51  E-value=0.067  Score=50.86  Aligned_cols=41  Identities=15%  Similarity=0.327  Sum_probs=36.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK  120 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~  120 (349)
                      .+|-|+     |.|++|..++..|.+.||+|++.+|+++..+.+..
T Consensus         9 ~~~~vI-----GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~   49 (446)
T 4a7p_A            9 VRIAMI-----GTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ   49 (446)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred             eEEEEE-----cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence            579999     79999999999999999999999999877665543

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.51  E-value=0.014  Score=53.21  Aligned_cols=87  Identities=13%  Similarity=0.158  Sum_probs=52.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      |++||.|+    | .|.+|...++.|.+. +++|+++ +|+++...++.        +  ..++.     ..++++++..
T Consensus         2 m~~~vgii----G-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~--------~--~~~~~-----~~~~~~~l~~   61 (331)
T 4hkt_A            2 MTVRFGLL----G-AGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIA--------G--AYGCE-----VRTIDAIEAA   61 (331)
T ss_dssp             -CEEEEEE----C-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH--------H--HTTCE-----ECCHHHHHHC
T ss_pred             CceEEEEE----C-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHH--------H--HhCCC-----cCCHHHHhcC
Confidence            57899999    5 599999999999885 7888754 55544332211        0  01333     2344555554


Q ss_pred             CCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       151 ~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      .++|+|+-+..                         .+....+.+++++++.|+
T Consensus        62 ~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~  115 (331)
T 4hkt_A           62 ADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKA  115 (331)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCC
Confidence            44687776544                         345556666666666664

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=95.49  E-value=0.029  Score=51.71  Aligned_cols=98  Identities=19%  Similarity=0.202  Sum_probs=61.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---Chh----hH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPA----EV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~----~l  144 (349)
                      .+.+|||+    |+ |-+|...++.+...|.+ |+++++++++.+..        .++ .+.+-....   +.+    .+
T Consensus       179 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a--------~~l-~~~~~~~~~~~~~~~~~~~~v  244 (363)
T 3m6i_A          179 LGDPVLIC----GA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA--------KEI-CPEVVTHKVERLSAEESAKKI  244 (363)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH--------HHH-CTTCEEEECCSCCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH--------HHh-chhcccccccccchHHHHHHH
Confidence            46789999    98 99999999999999987 88888876443211        122 111111111   223    33


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .++..+.++|+||++.|.. ......++.++..|  +++.++.
T Consensus       245 ~~~t~g~g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  284 (363)
T 3m6i_A          245 VESFGGIEPAVALECTGVE-SSIAAAIWAVKFGG--KVFVIGV  284 (363)
T ss_dssp             HHHTSSCCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECCC
T ss_pred             HHHhCCCCCCEEEECCCCh-HHHHHHHHHhcCCC--EEEEEcc
Confidence            4444455689999999843 23445556665544  7887664

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=95.47  E-value=0.003  Score=57.46  Aligned_cols=107  Identities=19%  Similarity=0.192  Sum_probs=65.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCC-----C------eEEEcCh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG-----G------KTVWGDP  141 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~-----~------~~~~~D~  141 (349)
                      ...+|.|+     |+|.+|+.++..++..|++|++++.+++...+........+..+...+     .      ..+. ..
T Consensus         5 ~~~~VaVi-----GaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~-~~   78 (319)
T 3ado_A            5 AAGDVLIV-----GSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS-SC   78 (319)
T ss_dssp             --CEEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE-EE
T ss_pred             CCCeEEEE-----CCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcc-cc
Confidence            45689999     569999999999999999999999876433211000000000000000     0      0000 02


Q ss_pred             hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       142 ~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .++.+++.++  |.||-+...+++.-+.+...+.+.--..-|+.|+
T Consensus        79 ~~l~~a~~~a--d~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSN  122 (319)
T 3ado_A           79 TNLAEAVEGV--VHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSS  122 (319)
T ss_dssp             CCHHHHTTTE--EEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred             cchHhHhccC--cEEeeccccHHHHHHHHHHHHHHHhhhcceeehh
Confidence            3455667665  9999999999999889988777654334444444

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.47  E-value=0.045  Score=49.79  Aligned_cols=86  Identities=19%  Similarity=0.033  Sum_probs=57.6

Q ss_pred             cceEEEEEecCCCcccchHH-HHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-hhhHHhhh-c
Q 018900           73 EKKKVLIVNTNSGGHAVIGF-YLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVV-G  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~-~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~l~~~~-~  149 (349)
                      .+|+|.|+     |-|.+|. .+++.|.++|++|++.++.....         ...++...++++..+. ++.   +. .
T Consensus         3 ~~~~i~~i-----GiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~---------~~~~L~~~gi~v~~g~~~~~---l~~~   65 (326)
T 3eag_A            3 AMKHIHII-----GIGGTFMGGLAAIAKEAGFEVSGCDAKMYPP---------MSTQLEALGIDVYEGFDAAQ---LDEF   65 (326)
T ss_dssp             CCCEEEEE-----SCCSHHHHHHHHHHHHTTCEEEEEESSCCTT---------HHHHHHHTTCEEEESCCGGG---GGSC
T ss_pred             CCcEEEEE-----EECHHHHHHHHHHHHhCCCEEEEEcCCCCcH---------HHHHHHhCCCEEECCCCHHH---cCCC
Confidence            36899999     5777888 49999999999999999875321         1134555688877764 332   22 2


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +  +|.||...++..+  ...++.|++.|+
T Consensus        66 ~--~d~vV~Spgi~~~--~p~~~~a~~~gi   91 (326)
T 3eag_A           66 K--ADVYVIGNVAKRG--MDVVEAILNLGL   91 (326)
T ss_dssp             C--CSEEEECTTCCTT--CHHHHHHHHTTC
T ss_pred             C--CCEEEECCCcCCC--CHHHHHHHHcCC
Confidence            3  5999998886433  234555566554

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.46  E-value=0.0063  Score=54.06  Aligned_cols=39  Identities=15%  Similarity=0.164  Sum_probs=34.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      .+++|+|+    |+ |.+|+.++..|++.|++|++..|+.++.+
T Consensus       118 ~~~~vlvl----Ga-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~  156 (272)
T 1p77_A          118 PNQHVLIL----GA-GGATKGVLLPLLQAQQNIVLANRTFSKTK  156 (272)
T ss_dssp             TTCEEEEE----CC-SHHHHTTHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            56899999    87 77999999999999999999999875543

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.44  E-value=0.023  Score=53.99  Aligned_cols=38  Identities=29%  Similarity=0.332  Sum_probs=33.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~  117 (349)
                      |+|.|+    | .|++|..++..|.+.||+|++++|+++..+.
T Consensus         1 mkI~VI----G-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~   38 (436)
T 1mv8_A            1 MRISIF----G-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (436)
T ss_dssp             CEEEEE----C-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            489999    5 8999999999999999999999998755443

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.44  E-value=0.078  Score=48.66  Aligned_cols=112  Identities=18%  Similarity=0.174  Sum_probs=69.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCC--------Cccc----ce--ecCCCeEE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPF--------NRFN----EI--VSAGGKTV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~--------~~~~----~l--~~~~~~~~  137 (349)
                      ...+|||+    | .|.+|.++++.|...|. ++++++.+.-....+..+.+        .+..    .+  ..+.+++.
T Consensus        35 ~~~~Vliv----G-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~  109 (346)
T 1y8q_A           35 RASRVLLV----G-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVK  109 (346)
T ss_dssp             HTCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEE
T ss_pred             hCCeEEEE----C-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEE
Confidence            46799999    5 68899999999999997 78888765422222211111        1110    01  12344433


Q ss_pred             --EcCh-hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          138 --WGDP-AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       138 --~~D~-~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                        ..+. +...+.+.+  +|+||.+.. +...-..+-++|++.++ .||..++.+.+|.
T Consensus       110 ~~~~~~~~~~~~~~~~--~dvVv~~~d-~~~~r~~ln~~~~~~~i-p~i~~~~~G~~G~  164 (346)
T 1y8q_A          110 VDTEDIEKKPESFFTQ--FDAVCLTCC-SRDVIVKVDQICHKNSI-KFFTGDVFGYHGY  164 (346)
T ss_dssp             EECSCGGGCCHHHHTT--CSEEEEESC-CHHHHHHHHHHHHHTTC-EEEEEEEEBTEEE
T ss_pred             EEecccCcchHHHhcC--CCEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEeecccEEE
Confidence              2232 223455655  499998754 66667778888998885 7888877776664

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=95.42  E-value=0.022  Score=52.99  Aligned_cols=96  Identities=16%  Similarity=0.230  Sum_probs=62.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC---hhh----
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD---PAE----  143 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D---~~~----  143 (349)
                      .+.+|||+    | +|-+|...++.+...| .+|++++++++..+.+           ...+.+. +..+   .++    
T Consensus       195 ~g~~VlV~----G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~~~~  258 (380)
T 1vj0_A          195 AGKTVVIQ----G-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-----------EEIGADLTLNRRETSVEERRKA  258 (380)
T ss_dssp             BTCEEEEE----C-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----C-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-----------HHcCCcEEEeccccCcchHHHH
Confidence            46789999    9 8999999999999899 6999999876543211           1223332 2222   223    


Q ss_pred             HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +.++..+.++|+||++.+.. ......++.++..|  +++.++.
T Consensus       259 v~~~~~g~g~Dvvid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  299 (380)
T 1vj0_A          259 IMDITHGRGADFILEATGDS-RALLEGSELLRRGG--FYSVAGV  299 (380)
T ss_dssp             HHHHTTTSCEEEEEECSSCT-THHHHHHHHEEEEE--EEEECCC
T ss_pred             HHHHhCCCCCcEEEECCCCH-HHHHHHHHHHhcCC--EEEEEec
Confidence            33343444589999999842 23445566665544  7887664

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.40  E-value=0.022  Score=52.27  Aligned_cols=96  Identities=14%  Similarity=0.220  Sum_probs=60.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-E-EcC----hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WGD----PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~D----~~~l~~  146 (349)
                      .+.+|||+    |+ |-+|...++.+...|.+|++++++++..+..           ...+.+. + ..|    .+.+.+
T Consensus       168 ~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~~~~~~~~~~~~~~i~~  231 (352)
T 1e3j_A          168 LGTTVLVI----GA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-----------KNCGADVTLVVDPAKEEESSIIE  231 (352)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------HHTTCSEEEECCTTTSCHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-----------HHhCCCEEEcCcccccHHHHHHH
Confidence            46799999    96 9999999999988999999998876443211           1112221 1 111    233444


Q ss_pred             hhc---CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~---~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ...   +.++|+||++.+.. ......++.++..|  +++.++.
T Consensus       232 ~~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  272 (352)
T 1e3j_A          232 RIRSAIGDLPNVTIDCSGNE-KCITIGINITRTGG--TLMLVGM  272 (352)
T ss_dssp             HHHHHSSSCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECSC
T ss_pred             HhccccCCCCCEEEECCCCH-HHHHHHHHHHhcCC--EEEEEec
Confidence            443   34589999999843 23345556665544  7887653

>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}

Probab=95.38  E-value=0.025  Score=53.99  Aligned_cols=101  Identities=10%  Similarity=0.078  Sum_probs=58.1

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcChhhHHhhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D~~~l~~~~  148 (349)
                      ..|+++|||+    |+ |.+|..+++++.+.|++|++++...+........ .+..-.+..  ..+. ...|.+.+.++.
T Consensus         3 ~~~~k~ILI~----g~-g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~-ad~~~~i~~~~~~~~-~y~d~~~l~~~~   75 (461)
T 2dzd_A            3 TRRIRKVLVA----NR-GEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYK-ADEAYLVGEGKKPIE-AYLDIEGIIEIA   75 (461)
T ss_dssp             CCCCSEEEEC----SC-HHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHH-SSSEEECSTTSCTTG-GGTCHHHHHHHH
T ss_pred             CCcCcEEEEE----CC-cHHHHHHHHHHHHcCCEEEEEECCcccccchhhh-CCEEEEcCCCCCccc-cccCHHHHHHHH
Confidence            3467899999    65 7789999999999999999998755321100000 000000000  0000 013556677777


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +..++|.|+-..+...+. ..+.+.+.+.|+
T Consensus        76 ~~~~id~v~~~~g~~~E~-~~~~~~~~~~gi  105 (461)
T 2dzd_A           76 KAHDVDAIHPGYGFLSEN-IQFAKRCREEGI  105 (461)
T ss_dssp             HHTTCCEEECCSSSSTTC-HHHHHHHHHTTC
T ss_pred             HHhCCCEEEECCCccccC-HHHHHHHHHcCC
Confidence            666789988654321121 245667777776

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=95.38  E-value=0.011  Score=56.32  Aligned_cols=95  Identities=11%  Similarity=0.102  Sum_probs=56.3

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-------EEcChhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-------VWGDPAE  143 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~D~~~  143 (349)
                      .+|++||||+    | .|.+|..+++.+.+.|+++++++...+....        ...+.+..+.+       ...|.+.
T Consensus         3 ~m~~~kiLI~----g-~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~--------~~~~ad~~~~i~~~~~~~~~~d~~~   69 (446)
T 3ouz_A            3 AMEIKSILIA----N-RGEIALRALRTIKEMGKKAICVYSEADKDAL--------YLKYADASICIGKARSSESYLNIPA   69 (446)
T ss_dssp             TTCCCEEEEC----C-CHHHHHHHHHHHHHTTCEEEEEEEGGGTTCT--------HHHHSSEEEEEECCTTTTGGGCHHH
T ss_pred             ccccceEEEE----C-CCHHHHHHHHHHHHcCCEEEEEEcCcccccc--------hHhhCCEEEEcCCCCccccccCHHH
Confidence            3567899999    5 6779999999999999999999754421110        00011000000       1124566


Q ss_pred             HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +.++.+..++|+|+-.-+...+. ..+.+.+.+.|+
T Consensus        70 l~~~~~~~~~d~i~p~~g~~~e~-~~~~~~~~~~g~  104 (446)
T 3ouz_A           70 IIAAAEIAEADAIFPGYGFLSEN-QNFVEICAKHNI  104 (446)
T ss_dssp             HHHHHHHHTCSEEECCSSTTTTC-HHHHHHHHHTTC
T ss_pred             HHHHHHHhCcCEEEECCcccccC-HHHHHHHHHCCC
Confidence            66666665689887543321111 345666777775

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.37  E-value=0.093  Score=48.30  Aligned_cols=105  Identities=12%  Similarity=0.132  Sum_probs=63.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT-  136 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~-  136 (349)
                      ...+|+|+    | .|.+|..+++.|...|. ++++++++.-....+..+.+....++              ..+.+++ 
T Consensus       117 ~~~~Vlvv----G-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~  191 (353)
T 3h5n_A          117 KNAKVVIL----G-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS  191 (353)
T ss_dssp             HTCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hCCeEEEE----C-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEE
Confidence            46799999    5 57899999999999996 79999987533333322211111111              1223333 


Q ss_pred             -EEcC--hhh-HHhhhcCCCccEEEeCCCCChh-hHHHHHHHHHhCCCcEEEEecc
Q 018900          137 -VWGD--PAE-VGNVVGGVTFDVVLDNNGKNLD-AVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       137 -~~~D--~~~-l~~~~~~~~~d~Vi~~a~~~~~-~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                       +..+  .+. +.. +.+  +|+||.+.. |.. .-..+-++|++.++ .+|+.+.
T Consensus       192 ~~~~~i~~~~~~~~-~~~--~DlVvd~~D-n~~~~r~~ln~~c~~~~~-p~i~~~~  242 (353)
T 3h5n_A          192 EIALNINDYTDLHK-VPE--ADIWVVSAD-HPFNLINWVNKYCVRANQ-PYINAGY  242 (353)
T ss_dssp             EEECCCCSGGGGGG-SCC--CSEEEECCC-CSTTHHHHHHHHHHHTTC-CEEEEEE
T ss_pred             EeecccCchhhhhH-hcc--CCEEEEecC-ChHHHHHHHHHHHHHhCC-CEEEEEE
Confidence             3222  222 555 555  599999764 444 34445568888886 5776544

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.37  E-value=0.017  Score=51.72  Aligned_cols=38  Identities=24%  Similarity=0.329  Sum_probs=32.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      |+|+|.|+    | .|.+|..+++.|.+.|++|++.+|+++..
T Consensus         4 M~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~   41 (299)
T 1vpd_A            4 MTMKVGFI----G-LGIMGKPMSKNLLKAGYSLVVSDRNPEAI   41 (299)
T ss_dssp             --CEEEEE----C-CSTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ccceEEEE----C-chHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            45799999    6 79999999999999999999999976544

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.37  E-value=0.077  Score=52.01  Aligned_cols=87  Identities=11%  Similarity=0.078  Sum_probs=64.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      ++|+|.    | .|.+|+++++.|.+.|++|++++++++..+++               ..++.||   ++.+.++--+ 
T Consensus       349 ~~viIi----G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------------~~~i~gD~t~~~~L~~agi~-  407 (565)
T 4gx0_A          349 ELIFII----G-HGRIGCAAAAFLDRKPVPFILIDRQESPVCND---------------HVVVYGDATVGQTLRQAGID-  407 (565)
T ss_dssp             CCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---------------SCEEESCSSSSTHHHHHTTT-
T ss_pred             CCEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---------------CCEEEeCCCCHHHHHhcCcc-
Confidence            789999    5 59999999999999999999999998765432               1567777   5556554222 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCc-EEE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFL  183 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i  183 (349)
                      +.|.+|-+.+.+ +....+...||+.+.+ ++|
T Consensus       408 ~ad~vi~~~~~d-~~ni~~~~~ak~l~~~~~ii  439 (565)
T 4gx0_A          408 RASGIIVTTNDD-STNIFLTLACRHLHSHIRIV  439 (565)
T ss_dssp             SCSEEEECCSCH-HHHHHHHHHHHHHCSSSEEE
T ss_pred             ccCEEEEECCCc-hHHHHHHHHHHHHCCCCEEE
Confidence            369999888866 4555566677888765 555

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=95.34  E-value=0.029  Score=51.19  Aligned_cols=92  Identities=18%  Similarity=0.142  Sum_probs=53.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc--CCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV--GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +||.|.    ||+|++|+.+++.|.+++|++..+..  ......    .   .+. +....+++...|++   . + +  
T Consensus         1 mkVaI~----GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g----~---~l~-~~g~~i~v~~~~~~---~-~-~--   61 (331)
T 2yv3_A            1 MRVAVV----GATGAVGREILKVLEARNFPLSELRLYASPRSAG----V---RLA-FRGEEIPVEPLPEG---P-L-P--   61 (331)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSS----C---EEE-ETTEEEEEEECCSS---C-C-C--
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCC----C---EEE-EcCceEEEEeCChh---h-c-C--
Confidence            479999    99999999999999987775433321  110000    0   000 11112233333332   2 2 3  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      +|+|+.+.+..  .....+....+.|. ++|-.|+.
T Consensus        62 ~DvV~~a~g~~--~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           62 VDLVLASAGGG--ISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             CSEEEECSHHH--HHHHHHHHHHHTTC-EEEECSSS
T ss_pred             CCEEEECCCcc--chHHHHHHHHHCCC-EEEECCCc
Confidence            59999998833  34555666667786 67777764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.34  E-value=0.0055  Score=55.67  Aligned_cols=93  Identities=16%  Similarity=0.172  Sum_probs=59.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEcChhh-HHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAE-VGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D~~~-l~~~~~  149 (349)
                      ..+.+|||+    ||+|-+|...++.+...|.+|+++++..+ .+           .+...+.+ ++..+.++ +.+.+.
T Consensus       151 ~~g~~vlV~----Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~-----------~~~~lGa~~~i~~~~~~~~~~~~~  214 (321)
T 3tqh_A          151 KQGDVVLIH----AGAGGVGHLAIQLAKQKGTTVITTASKRN-HA-----------FLKALGAEQCINYHEEDFLLAIST  214 (321)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEECHHH-HH-----------HHHHHTCSEEEETTTSCHHHHCCS
T ss_pred             CCCCEEEEE----cCCcHHHHHHHHHHHHcCCEEEEEeccch-HH-----------HHHHcCCCEEEeCCCcchhhhhcc
Confidence            356799999    99999999999999999999998886432 11           11122333 22222333 555554


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +  +|+|+++.|...  ....+++++..|  +++.++
T Consensus       215 g--~D~v~d~~g~~~--~~~~~~~l~~~G--~iv~~g  245 (321)
T 3tqh_A          215 P--VDAVIDLVGGDV--GIQSIDCLKETG--CIVSVP  245 (321)
T ss_dssp             C--EEEEEESSCHHH--HHHHGGGEEEEE--EEEECC
T ss_pred             C--CCEEEECCCcHH--HHHHHHhccCCC--EEEEeC
Confidence            4  699999998432  244445554433  677553

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.33  E-value=0.02  Score=53.58  Aligned_cols=97  Identities=19%  Similarity=0.165  Sum_probs=63.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~  146 (349)
                      .+.+|||+    |+ |-+|...++.+...|. +|++++++++..+..           ...+.+++..+     .+.+.+
T Consensus       185 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~i~~~~~~~~~~~~~~  248 (398)
T 2dph_A          185 PGSHVYIA----GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-----------SDAGFETIDLRNSAPLRDQIDQ  248 (398)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-----------HTTTCEEEETTSSSCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-----------HHcCCcEEcCCCcchHHHHHHH
Confidence            46799999    96 9999999988888898 899999876543321           11233333221     233444


Q ss_pred             hhcCCCccEEEeCCCCCh-------------hhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNL-------------DAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~-------------~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +..+.++|+||++.+...             ......++.++..|  +++.++.
T Consensus       249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG--~iv~~G~  300 (398)
T 2dph_A          249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGG--AIGIPGI  300 (398)
T ss_dssp             HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEE--EEECCSC
T ss_pred             HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCC--EEEEecc
Confidence            444445899999998642             23555666666544  6776553

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=95.33  E-value=0.13  Score=47.20  Aligned_cols=93  Identities=19%  Similarity=0.173  Sum_probs=56.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ++||.|+    ||||++|..+++.|.++.|   +++.+.-......++        . +......+...+.+    .+.+
T Consensus         1 ~~~VaIv----GatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~--------~-~~~~~~~~~~~~~~----~~~~   63 (344)
T 3tz6_A            1 GLSIGIV----GATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKL--------A-FRGQEIEVEDAETA----DPSG   63 (344)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEE--------E-ETTEEEEEEETTTS----CCTT
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCce--------e-ecCCceEEEeCCHH----Hhcc
Confidence            3689999    9999999999998888754   455555322211111        1 11111122222222    2333


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                        +|+|+.+.+.  ...+..+..+.+.|. ++|=.|+.
T Consensus        64 --~Dvvf~a~~~--~~s~~~a~~~~~~G~-~vID~Sa~   96 (344)
T 3tz6_A           64 --LDIALFSAGS--AMSKVQAPRFAAAGV-TVIDNSSA   96 (344)
T ss_dssp             --CSEEEECSCH--HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             --CCEEEECCCh--HHHHHHHHHHHhCCC-EEEECCCc
Confidence              5999999883  345666777777787 67777764

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.28  E-value=0.0089  Score=54.43  Aligned_cols=92  Identities=16%  Similarity=0.176  Sum_probs=57.4

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhH-Hh---hhcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV-GN---VVGGV  151 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l-~~---~~~~~  151 (349)
                      +|||+    ||+|-+|...++.+...|.+|++++++++..+..           ...+.+.+. |..+. .+   .+.+.
T Consensus       153 ~VlV~----Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-----------~~lGa~~v~-~~~~~~~~~~~~~~~~  216 (330)
T 1tt7_A          153 SVLVT----GATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-----------KQLGASEVI-SREDVYDGTLKALSKQ  216 (330)
T ss_dssp             CEEEE----STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-----------HHHTCSEEE-EHHHHCSSCCCSSCCC
T ss_pred             eEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCcEEE-ECCCchHHHHHHhhcC
Confidence            79999    9999999999999988899999999986543211           112333221 22221 11   11223


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ++|+||++.+.  ......++.++..  .+++.++.
T Consensus       217 ~~d~vid~~g~--~~~~~~~~~l~~~--G~iv~~G~  248 (330)
T 1tt7_A          217 QWQGAVDPVGG--KQLASLLSKIQYG--GSVAVSGL  248 (330)
T ss_dssp             CEEEEEESCCT--HHHHHHHTTEEEE--EEEEECCC
T ss_pred             CccEEEECCcH--HHHHHHHHhhcCC--CEEEEEec
Confidence            58999999985  2334444444433  37776653

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.24  E-value=0.06  Score=49.80  Aligned_cols=97  Identities=13%  Similarity=0.046  Sum_probs=59.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC----hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~l~~  146 (349)
                      ..+.+|||+    ||+|-+|...++.+...|.+|+++.+ +++.+           .....+.+. +..+    .+.+.+
T Consensus       163 ~~g~~VlV~----Ga~G~vG~~a~qla~~~Ga~Vi~~~~-~~~~~-----------~~~~lGa~~vi~~~~~~~~~~v~~  226 (371)
T 3gqv_A          163 SKPVYVLVY----GGSTATATVTMQMLRLSGYIPIATCS-PHNFD-----------LAKSRGAEEVFDYRAPNLAQTIRT  226 (371)
T ss_dssp             SSCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH-----------HHHHTTCSEEEETTSTTHHHHHHH
T ss_pred             CCCcEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeC-HHHHH-----------HHHHcCCcEEEECCCchHHHHHHH
Confidence            456789999    99999999999999999999988863 33221           122223332 2222    233444


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +..+ ++|+|+++.|.. ......++++.+. -.+++.++.
T Consensus       227 ~t~g-~~d~v~d~~g~~-~~~~~~~~~l~~~-~G~iv~~g~  264 (371)
T 3gqv_A          227 YTKN-NLRYALDCITNV-ESTTFCFAAIGRA-GGHYVSLNP  264 (371)
T ss_dssp             HTTT-CCCEEEESSCSH-HHHHHHHHHSCTT-CEEEEESSC
T ss_pred             HccC-CccEEEECCCch-HHHHHHHHHhhcC-CCEEEEEec
Confidence            4334 389999999842 2233444544222 247887664

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=95.23  E-value=0.033  Score=51.73  Aligned_cols=89  Identities=13%  Similarity=0.096  Sum_probs=56.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++|+|||+    |+ |.+|+.+++++.+.|++|++++..+.....       .   +.+..+.....|.+.+.++.+..+
T Consensus        10 ~~~~ili~----g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-------~---~~d~~~~~~~~d~~~l~~~~~~~~   74 (391)
T 1kjq_A           10 AATRVMLL----GS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-------H---VAHRSHVINMLDGDALRRVVELEK   74 (391)
T ss_dssp             TCCEEEEE----SC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-------G---GSSEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-------h---hccceEECCCCCHHHHHHHHHHcC
Confidence            46799999    66 789999999999999999999876543210       0   000000111135666666666556


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      +|+|+..... ..  .++++.+.+.|+
T Consensus        75 ~d~v~~~~e~-~~--~~~~~~l~~~gi   98 (391)
T 1kjq_A           75 PHYIVPEIEA-IA--TDMLIQLEEEGL   98 (391)
T ss_dssp             CSEEEECSSC-SC--HHHHHHHHHTTC
T ss_pred             CCEEEECCCc-CC--HHHHHHHHhCCC
Confidence            8999875542 11  235566667776

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.21  E-value=0.0068  Score=55.03  Aligned_cols=92  Identities=15%  Similarity=0.162  Sum_probs=58.6

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cChhhHHhhhcCCCc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVGGVTF  153 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D~~~l~~~~~~~~~  153 (349)
                      +|||+    |++|-+|...++.+...|.+|+++++++++.+.+           ...+.+.+.  .|.+.+.+ +...++
T Consensus       149 ~VlV~----Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~-~~~~~~  212 (324)
T 3nx4_A          149 EVVVT----GASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-----------KSLGANRILSRDEFAESRP-LEKQLW  212 (324)
T ss_dssp             CEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-----------HHHTCSEEEEGGGSSCCCS-SCCCCE
T ss_pred             eEEEE----CCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-----------HhcCCCEEEecCCHHHHHh-hcCCCc
Confidence            39999    9999999999999999999999999876544321           112333221  11121222 222358


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      |+|+++.+..  .....+++++..|  +++.++.
T Consensus       213 d~v~d~~g~~--~~~~~~~~l~~~G--~iv~~G~  242 (324)
T 3nx4_A          213 AGAIDTVGDK--VLAKVLAQMNYGG--CVAACGL  242 (324)
T ss_dssp             EEEEESSCHH--HHHHHHHTEEEEE--EEEECCC
T ss_pred             cEEEECCCcH--HHHHHHHHHhcCC--EEEEEec
Confidence            9999998843  4444455554433  7887764

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.21  E-value=0.043  Score=48.86  Aligned_cols=99  Identities=15%  Similarity=0.137  Sum_probs=60.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccc-eecCCCeEEEc-ChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVWG-DPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~-l~~~~~~~~~~-D~~~l~~~~~  149 (349)
                      |+|.|+    | .|.+|..+++.|.+.|++|++.+|+++..+.+......   ...+ +...++-++.. +...++.++.
T Consensus         1 m~i~ii----G-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~   75 (296)
T 2gf2_A            1 MPVGFI----G-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYS   75 (296)
T ss_dssp             CCEEEE----C-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CeEEEE----e-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHh
Confidence            479999    5 79999999999999999999999987654433222111   1111 11122222222 3334444332


Q ss_pred             C-------CC-ccEEEeCCCCChhhHHHHHHHHHhCC
Q 018900          150 G-------VT-FDVVLDNNGKNLDAVRPVADWAKSSG  178 (349)
Q Consensus       150 ~-------~~-~d~Vi~~a~~~~~~~~~ll~~a~~~g  178 (349)
                      .       .+ -.+||++++........+.+.+.+.+
T Consensus        76 ~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g  112 (296)
T 2gf2_A           76 GANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG  112 (296)
T ss_dssp             STTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT
T ss_pred             CchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence            2       12 24677888877777777777666544

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=95.20  E-value=0.12  Score=46.79  Aligned_cols=89  Identities=12%  Similarity=0.106  Sum_probs=54.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +++||.|+    | .|.+|..+++.|.+. +.+|+++ +|+++...++....          ++....   .++++++..
T Consensus         4 ~~~rigii----G-~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~----------~~~~~~---~~~~~ll~~   65 (329)
T 3evn_A            4 SKVRYGVV----S-TAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKY----------HLPKAY---DKLEDMLAD   65 (329)
T ss_dssp             -CEEEEEE----B-CCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CC----------CCSCEE---SCHHHHHTC
T ss_pred             CceEEEEE----e-chHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHc----------CCCccc---CCHHHHhcC
Confidence            45799999    5 599999999988765 5677655 56665554332211          221122   344555554


Q ss_pred             CCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       151 ~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      ..+|+|+-+..                         .++...+.+++++++.|+
T Consensus        66 ~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~  119 (329)
T 3evn_A           66 ESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNL  119 (329)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCC
Confidence            45677775544                         356667778888877775

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=95.15  E-value=0.046  Score=49.57  Aligned_cols=89  Identities=21%  Similarity=0.209  Sum_probs=54.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc--CCCCcccCCCCCC-CcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV--GDENSDKMKKPPF-NRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R--~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+|.|+    | .|.+|..++..|.+.||+|++++|  +++..+.+..... ..+ .....  .+...+.+++.+.+.+.
T Consensus         1 m~I~ii----G-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-g~~~~--~~~~~~~~~~~~~~~~~   72 (335)
T 1txg_A            1 MIVSIL----G-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRL-GVKLN--GVEIFWPEQLEKCLENA   72 (335)
T ss_dssp             CEEEEE----S-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTT-TBCCC--SEEEECGGGHHHHHTTC
T ss_pred             CEEEEE----C-cCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCccc-Ccccc--ceEEecHHhHHHHHhcC
Confidence            479999    5 699999999999999999999999  6544433221110 000 00000  11222333555566554


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHH
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAK  175 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~  175 (349)
                        |+||-+....  .+..+++.+.
T Consensus        73 --D~vi~~v~~~--~~~~v~~~i~   92 (335)
T 1txg_A           73 --EVVLLGVSTD--GVLPVMSRIL   92 (335)
T ss_dssp             --SEEEECSCGG--GHHHHHHHHT
T ss_pred             --CEEEEcCChH--HHHHHHHHHh
Confidence              9999887654  4566666554

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.13  E-value=0.03  Score=50.94  Aligned_cols=39  Identities=23%  Similarity=0.243  Sum_probs=34.6

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~  114 (349)
                      ...+++|.|+     |.|.||+.+++.|...|++|++.+|..+.
T Consensus       134 ~l~gktvGIi-----GlG~IG~~vA~~l~~~G~~V~~~dr~~~~  172 (324)
T 3evt_A          134 TLTGQQLLIY-----GTGQIGQSLAAKASALGMHVIGVNTTGHP  172 (324)
T ss_dssp             CSTTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             cccCCeEEEE-----CcCHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            3457899999     79999999999999999999999998644

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=95.13  E-value=0.021  Score=53.02  Aligned_cols=96  Identities=13%  Similarity=0.196  Sum_probs=61.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE------cC-hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW------GD-PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~D-~~~l  144 (349)
                      .+.+|||+    |+ |-+|...++.+...|. +|+++++++++.+..+           ..+.+.+.      .| .+.+
T Consensus       193 ~g~~VlV~----Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~i  256 (378)
T 3uko_A          193 PGSNVAIF----GL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-----------KFGVNEFVNPKDHDKPIQEVI  256 (378)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-----------TTTCCEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----------HcCCcEEEccccCchhHHHHH
Confidence            46789999    98 9999999999888898 8999998876543221           12332221      11 2334


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .++..+ ++|+||++.+.. ......++.++.. -.+++.++.
T Consensus       257 ~~~~~g-g~D~vid~~g~~-~~~~~~~~~l~~g-~G~iv~~G~  296 (378)
T 3uko_A          257 VDLTDG-GVDYSFECIGNV-SVMRAALECCHKG-WGTSVIVGV  296 (378)
T ss_dssp             HHHTTS-CBSEEEECSCCH-HHHHHHHHTBCTT-TCEEEECSC
T ss_pred             HHhcCC-CCCEEEECCCCH-HHHHHHHHHhhcc-CCEEEEEcc
Confidence            445455 689999999842 2334445555442 147887764

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=95.12  E-value=0.059  Score=49.89  Aligned_cols=96  Identities=13%  Similarity=0.183  Sum_probs=59.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--c----C-hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--G----D-PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~----D-~~~l  144 (349)
                      .+.+|||+    |+ |-+|...++.+...|. +|++++++++..+..           ...+.+.+.  .    | .+.+
T Consensus       195 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~v  258 (376)
T 1e3i_A          195 PGSTCAVF----GL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-----------KALGATDCLNPRELDKPVQDVI  258 (376)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-----------HHhCCcEEEccccccchHHHHH
Confidence            46799999    85 9999999999988998 899998876544321           122333221  1    1 1223


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .++..+ .+|+||++.+.. ......++.++.. ..+++.++.
T Consensus       259 ~~~~~~-g~Dvvid~~G~~-~~~~~~~~~l~~~-~G~iv~~G~  298 (376)
T 1e3i_A          259 TELTAG-GVDYSLDCAGTA-QTLKAAVDCTVLG-WGSCTVVGA  298 (376)
T ss_dssp             HHHHTS-CBSEEEESSCCH-HHHHHHHHTBCTT-TCEEEECCC
T ss_pred             HHHhCC-CccEEEECCCCH-HHHHHHHHHhhcC-CCEEEEECC
Confidence            333334 689999999842 2334455555544 137887664

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=95.12  E-value=0.19  Score=46.62  Aligned_cols=94  Identities=15%  Similarity=0.162  Sum_probs=55.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHH-HHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc-ChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAK-ELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~-~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D~~~l~~~  147 (349)
                      .+++|-|+    ||||++|..+++ .|.++.+   +++.+.-. ....++..     +   ......+... |+++    
T Consensus         3 ~~~~VaIv----GATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~-----~---~~~~~~v~~~~~~~~----   65 (377)
T 3uw3_A            3 GSMNVGLV----GWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPS-----F---AKNETTLKDATSIDD----   65 (377)
T ss_dssp             CCCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCT-----T---CCSCCBCEETTCHHH----
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHH-----c---CCCceEEEeCCChhH----
Confidence            35789999    999999999999 5555553   56655433 22221111     1   1111222222 2222    


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i~~Ss  187 (349)
                      +.+  +|+|+.+.+..  ..+.++..+.+.|.+ ++|=.|+
T Consensus        66 ~~~--vDvvf~a~~~~--~s~~~~~~~~~~G~k~~VID~ss  102 (377)
T 3uw3_A           66 LKK--CDVIITCQGGD--YTNDVFPKLRAAGWNGYWIDAAS  102 (377)
T ss_dssp             HHT--CSEEEECSCHH--HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hcC--CCEEEECCChH--HHHHHHHHHHHCCCCEEEEeCCc
Confidence            344  49999998843  345666667778874 6665655

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=95.12  E-value=0.07  Score=49.40  Aligned_cols=35  Identities=26%  Similarity=0.357  Sum_probs=30.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      |++|||+    |+ |.+|+.++++|.+.|++|++++.++.
T Consensus         1 M~~Ilil----g~-g~~g~~~~~a~~~~G~~v~~~~~~~~   35 (380)
T 3ax6_A            1 MKKIGII----GG-GQLGKMMTLEAKKMGFYVIVLDPTPR   35 (380)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            5789999    65 89999999999999999999987654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.10  E-value=0.043  Score=49.89  Aligned_cols=99  Identities=20%  Similarity=0.243  Sum_probs=63.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccc---eecCCCeEEE-cChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVW-GDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~---l~~~~~~~~~-~D~~~l~~~  147 (349)
                      +++||.|+    |+ |.+|..++..|...|+ +|+.++++++..+....    .+.+   ......++.. .|.    +.
T Consensus         6 ~~~kI~vi----Ga-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~----dl~~~~~~~~~~~~v~~t~d~----~a   72 (324)
T 3gvi_A            6 ARNKIALI----GS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGL----DIAESSPVDGFDAKFTGANDY----AA   72 (324)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHH----HHHHHHHHHTCCCCEEEESSG----GG
T ss_pred             cCCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHH----HHhchhhhcCCCCEEEEeCCH----HH
Confidence            45799999    87 9999999999999998 99999998754421100    0001   0111233332 343    45


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                      +++.  |+||.+++.              |....+.+++.+.+..- ..++.+|
T Consensus        73 ~~~a--DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           73 IEGA--DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             GTTC--SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HCCC--CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            6665  999999883              33446666676666542 3566555

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=95.09  E-value=0.016  Score=53.22  Aligned_cols=97  Identities=19%  Similarity=0.264  Sum_probs=60.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE--EEcCh---hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT--VWGDP---AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~D~---~~l~~  146 (349)
                      .+++|||+    |++|-+|..+++.+... |.+|++++++++..+...        +   .+.+.  ...|.   +.+.+
T Consensus       170 ~g~~vlV~----Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~--------~---~g~~~~~~~~~~~~~~~~~~  234 (347)
T 1jvb_A          170 PTKTLLVV----GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK--------R---AGADYVINASMQDPLAEIRR  234 (347)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH--------H---HTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----CCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH--------H---hCCCEEecCCCccHHHHHHH
Confidence            56799999    99999999999999998 999999998764432111        1   12221  12222   22444


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +....++|+||++++.. ......++.++..|  +++.++.
T Consensus       235 ~~~~~~~d~vi~~~g~~-~~~~~~~~~l~~~G--~iv~~g~  272 (347)
T 1jvb_A          235 ITESKGVDAVIDLNNSE-KTLSVYPKALAKQG--KYVMVGL  272 (347)
T ss_dssp             HTTTSCEEEEEESCCCH-HHHTTGGGGEEEEE--EEEECCS
T ss_pred             HhcCCCceEEEECCCCH-HHHHHHHHHHhcCC--EEEEECC
Confidence            44312589999999842 12233334444333  7887664

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.09  E-value=0.056  Score=49.11  Aligned_cols=99  Identities=21%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccc---eecCCCeEE-EcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTV-WGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~---l~~~~~~~~-~~D~~~l~~~  147 (349)
                      +++||.|+    | .|.+|..++..|...|. +|+.++++++..+....    .+.+   ......++. ..|.    +.
T Consensus         4 ~~~kI~ii----G-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~----dL~~~~~~~~~~~~v~~t~d~----~a   70 (321)
T 3p7m_A            4 ARKKITLV----G-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKAL----DLLQTCPIEGVDFKVRGTNDY----KD   70 (321)
T ss_dssp             CCCEEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHH----HHHTTHHHHTCCCCEEEESCG----GG
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHH----HHHhhhhhcCCCcEEEEcCCH----HH
Confidence            35799999    8 59999999999999888 99999998754421100    0001   011123333 2343    45


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCC-cEEEEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv-~~~i~~S  186 (349)
                      +++.  |+||.+++.              |....+.+++.+.+..- ..++.+|
T Consensus        71 ~~~a--DvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           71 LENS--DVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             GTTC--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HCCC--CEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            6665  999999884              34456677777666553 3566554

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.07  E-value=0.13  Score=47.60  Aligned_cols=93  Identities=15%  Similarity=0.157  Sum_probs=53.7

Q ss_pred             eEEEEEecCCCcccchHHHHHH-HHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAK-ELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~-~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ++|-|+    |||||+|..+++ -|.++.+   +++.++-.. ...++.        ++......+...  .+.+. +.+
T Consensus         1 ~~VaIv----GATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~--------~~~~~~~~~~~~--~~~~~-~~~   64 (370)
T 3pzr_A            1 MRVGLV----GWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAP--------NFGKDAGMLHDA--FDIES-LKQ   64 (370)
T ss_dssp             CEEEEE----SCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCC--------CSSSCCCBCEET--TCHHH-HTT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHH--------HhCCCceEEEec--CChhH-hcc
Confidence            579999    999999999999 5555553   666654322 222111        111111222222  12222 344


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEEEecc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i~~Ss  187 (349)
                        +|+|+.+.+..  ..+.++..+.+.|.+ ++|=.|+
T Consensus        65 --~Dvvf~a~~~~--~s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           65 --LDAVITCQGGS--YTEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             --CSEEEECSCHH--HHHHHHHHHHHTTCCCEEEECSS
T ss_pred             --CCEEEECCChH--HHHHHHHHHHHCCCCEEEEeCCc
Confidence              49999998843  345666666677874 5665555

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.07  E-value=0.018  Score=50.60  Aligned_cols=91  Identities=12%  Similarity=0.161  Sum_probs=56.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCe-EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +|+|.|+    | .|.+|..+++.|.+.|++ |.+.+|+++..+++..          ..++.. ..|   +.+++.+  
T Consensus        10 ~m~i~ii----G-~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~----------~~g~~~-~~~---~~~~~~~--   68 (266)
T 3d1l_A           10 DTPIVLI----G-AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQ----------KVEAEY-TTD---LAEVNPY--   68 (266)
T ss_dssp             GCCEEEE----C-CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH----------HTTCEE-ESC---GGGSCSC--
T ss_pred             CCeEEEE----c-CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH----------HcCCce-eCC---HHHHhcC--
Confidence            4689999    6 599999999999999998 8888887654432110          003332 223   3344444  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhC-CC-cEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSS-GV-KQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~-gv-~~~i~~Ss  187 (349)
                      .|+||-+...+  ....+++.+... +. +-+|.+++
T Consensus        69 ~Dvvi~av~~~--~~~~v~~~l~~~~~~~~ivv~~s~  103 (266)
T 3d1l_A           69 AKLYIVSLKDS--AFAELLQGIVEGKREEALMVHTAG  103 (266)
T ss_dssp             CSEEEECCCHH--HHHHHHHHHHTTCCTTCEEEECCT
T ss_pred             CCEEEEecCHH--HHHHHHHHHHhhcCCCcEEEECCC
Confidence            49999887755  236666655442 22 23454444

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=95.05  E-value=0.021  Score=52.25  Aligned_cols=95  Identities=12%  Similarity=0.218  Sum_probs=61.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh----hhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~----~~l~~  146 (349)
                      .+.+|||+    |+ |-+|...++.+...  |.+|+++++++++.+.           +...+.+.+. |.    +.+.+
T Consensus       170 ~g~~VlV~----Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~-----------~~~lGa~~vi-~~~~~~~~~~~  232 (344)
T 2h6e_A          170 AEPVVIVN----GI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF-----------ALELGADYVS-EMKDAESLINK  232 (344)
T ss_dssp             SSCEEEEE----CC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH-----------HHHHTCSEEE-CHHHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH-----------HHHhCCCEEe-ccccchHHHHH
Confidence            56899999    99 99999999998888  9999999987643321           1112333222 32    22333


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +..+.++|+||++.+.. ......++.++..|  +++.++.
T Consensus       233 ~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~G--~iv~~g~  270 (344)
T 2h6e_A          233 LTDGLGASIAIDLVGTE-ETTYNLGKLLAQEG--AIILVGM  270 (344)
T ss_dssp             HHTTCCEEEEEESSCCH-HHHHHHHHHEEEEE--EEEECCC
T ss_pred             hhcCCCccEEEECCCCh-HHHHHHHHHhhcCC--EEEEeCC
Confidence            33343589999999843 23455566665544  7886654

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=95.05  E-value=0.044  Score=52.69  Aligned_cols=40  Identities=23%  Similarity=0.397  Sum_probs=34.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~  118 (349)
                      .|||.|+     |.|++|..++..|.+.||+|++++|+++..+.+
T Consensus         8 ~~~I~VI-----G~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l   47 (478)
T 2y0c_A            8 SMNLTII-----GSGSVGLVTGACLADIGHDVFCLDVDQAKIDIL   47 (478)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CceEEEE-----CcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            4789999     799999999999999999999999987555443

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=95.01  E-value=0.069  Score=47.44  Aligned_cols=103  Identities=16%  Similarity=0.209  Sum_probs=57.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC---cccceecCCCeEEE--c-ChhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVSAGGKTVW--G-DPAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~---~~~~l~~~~~~~~~--~-D~~~l~~  146 (349)
                      +||+|.|+    | .|.+|..+++.|.+.|++|++.+ +++..+.+......   ...+.. .+.+++.  . +...+..
T Consensus         2 ~~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~-~~~D~vi~~vp~~~~~~~   74 (295)
T 1yb4_A            2 NAMKLGFI----G-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVT-EFADIIFIMVPDTPQVED   74 (295)
T ss_dssp             --CEEEEC----C-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHH-HTCSEEEECCSSHHHHHH
T ss_pred             CCCEEEEE----c-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHH-hcCCEEEEECCCHHHHHH
Confidence            35789999    5 89999999999999999999888 66554433221111   111111 1233332  2 2333444


Q ss_pred             hhc-------CCCc-cEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          147 VVG-------GVTF-DVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       147 ~~~-------~~~~-d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ++.       ..+. ..||++..........+.+.+.+.++ +++
T Consensus        75 v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~-~~~  118 (295)
T 1yb4_A           75 VLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGA-DYL  118 (295)
T ss_dssp             HHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTE-EEE
T ss_pred             HHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            442       1122 35666665544555667777666443 444

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.01  E-value=0.11  Score=44.79  Aligned_cols=81  Identities=22%  Similarity=0.383  Sum_probs=52.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEE-EEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~-~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      +||.|+    |. |.+|+.+++.|.+.|++|+ +.+|+. ...                .   ...|   +++++. .++
T Consensus         1 m~vgiI----G~-G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~----------------~---~~~~---~~~l~~-~~~   51 (236)
T 2dc1_A            1 MLVGLI----GY-GAIGKFLAEWLERNGFEIAAILDVRG-EHE----------------K---MVRG---IDEFLQ-REM   51 (236)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEECSSC-CCT----------------T---EESS---HHHHTT-SCC
T ss_pred             CEEEEE----CC-CHHHHHHHHHHhcCCCEEEEEEecCc-chh----------------h---hcCC---HHHHhc-CCC
Confidence            479999    75 9999999999998899985 555553 211                0   2224   444443 236


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      |+|+.+....  ....++..+.+.|. ++|-.++
T Consensus        52 DvVv~~~~~~--~~~~~~~~~l~~G~-~vv~~~~   82 (236)
T 2dc1_A           52 DVAVEAASQQ--AVKDYAEKILKAGI-DLIVLST   82 (236)
T ss_dssp             SEEEECSCHH--HHHHHHHHHHHTTC-EEEESCG
T ss_pred             CEEEECCCHH--HHHHHHHHHHHCCC-cEEEECc
Confidence            9999998854  34444555556674 5654444

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.00  E-value=0.025  Score=51.16  Aligned_cols=104  Identities=10%  Similarity=0.083  Sum_probs=60.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCC--CCcccCCCCCCCc---ccceecCCCeEEEc---C---
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD--ENSDKMKKPPFNR---FNEIVSAGGKTVWG---D---  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~--~~~~~~~~~~~~~---~~~l~~~~~~~~~~---D---  140 (349)
                      .+|+|.|+     |.|.+|..+++.|.+.|| +|++.+|++  +..+.+.......   ..+.. .+.+++..   +   
T Consensus        23 ~~~~I~iI-----G~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~   96 (312)
T 3qsg_A           23 NAMKLGFI-----GFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA-GECDVIFSLVTAQAA   96 (312)
T ss_dssp             --CEEEEE-----CCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH-HHCSEEEECSCTTTH
T ss_pred             CCCEEEEE-----CccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH-hcCCEEEEecCchhH
Confidence            46799999     579999999999999999 999999963  2222111111001   11111 11222221   1   


Q ss_pred             hhhHHhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhC--CCcEEE
Q 018900          141 PAEVGNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSS--GVKQFL  183 (349)
Q Consensus       141 ~~~l~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~--gv~~~i  183 (349)
                      .+.+..+....+ -.+||++.+......+.+.+.+.+.  |+ +|+
T Consensus        97 ~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~-~~v  141 (312)
T 3qsg_A           97 LEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSA-QYA  141 (312)
T ss_dssp             HHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTC-EEE
T ss_pred             HHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCC-eEE
Confidence            222333333222 2577888887777788888777765  55 555

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=94.99  E-value=0.063  Score=45.42  Aligned_cols=36  Identities=25%  Similarity=0.345  Sum_probs=30.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ..+++|.|+    | .|.+|..+++.|.+.|++|++.+|++
T Consensus        17 ~~~~~I~ii----G-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           17 FQGMEITIF----G-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ---CEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            356789999    6 89999999999999999999999875

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=94.99  E-value=0.026  Score=52.01  Aligned_cols=100  Identities=12%  Similarity=0.121  Sum_probs=60.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc-C---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-D---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D---~~~l~~~~  148 (349)
                      .+.+|||+    ||+|-+|...++.+...|.+|+++++..+..++       +.......+.+.+.. +   .+.+.++.
T Consensus       167 ~g~~VlV~----Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~-------~~~~~~~lGa~~vi~~~~~~~~~~~~~~  235 (357)
T 1zsy_A          167 PGDSVIQN----ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK-------LSDRLKSLGAEHVITEEELRRPEMKNFF  235 (357)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEECCCSCHHH-------HHHHHHHTTCSEEEEHHHHHSGGGGGTT
T ss_pred             CCCEEEEe----CCcCHHHHHHHHHHHHcCCEEEEEecCccchHH-------HHHHHHhcCCcEEEecCcchHHHHHHHH
Confidence            46799999    999999999999888889999888876532110       001111223333221 1   12344444


Q ss_pred             cCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+. ++|+||++.|..  .....+++++..|  +++.++.
T Consensus       236 ~~~~~~Dvvid~~g~~--~~~~~~~~l~~~G--~iv~~G~  271 (357)
T 1zsy_A          236 KDMPQPRLALNCVGGK--SSTELLRQLARGG--TMVTYGG  271 (357)
T ss_dssp             SSSCCCSEEEESSCHH--HHHHHHTTSCTTC--EEEECCC
T ss_pred             hCCCCceEEEECCCcH--HHHHHHHhhCCCC--EEEEEec
Confidence            433 379999999843  2233455554433  7887653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.97  E-value=0.024  Score=51.77  Aligned_cols=78  Identities=15%  Similarity=0.113  Sum_probs=48.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++||.|+    |+ |.+|..++..|...|+ +|++++++++..+............+ ....++..  ..++++.+++. 
T Consensus         9 ~~kI~VI----Ga-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~-~~~~~i~~--t~d~~ea~~~a-   79 (331)
T 1pzg_A            9 RKKVAMI----GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV-DTNVSVRA--EYSYEAALTGA-   79 (331)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT-TCCCCEEE--ECSHHHHHTTC-
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc-CCCCEEEE--eCCHHHHhCCC-
Confidence            4689999    87 9999999999999998 99999998754432100000000000 01122222  13345466666 


Q ss_pred             ccEEEeCCC
Q 018900          153 FDVVLDNNG  161 (349)
Q Consensus       153 ~d~Vi~~a~  161 (349)
                       |+||-.++
T Consensus        80 -DiVi~a~g   87 (331)
T 1pzg_A           80 -DCVIVTAG   87 (331)
T ss_dssp             -SEEEECCS
T ss_pred             -CEEEEccC
Confidence             99999885

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=94.97  E-value=0.033  Score=51.04  Aligned_cols=91  Identities=16%  Similarity=0.282  Sum_probs=61.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+.+|||+    |+ |-+|...++.+...|.+|+++++++++.+.           +...+.+.+..|.+.+.+     +
T Consensus       176 ~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-----------~~~lGa~~v~~~~~~~~~-----~  234 (348)
T 3two_A          176 KGTKVGVA----GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD-----------ALSMGVKHFYTDPKQCKE-----E  234 (348)
T ss_dssp             TTCEEEEE----SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH-----------HHHTTCSEEESSGGGCCS-----C
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-----------HHhcCCCeecCCHHHHhc-----C
Confidence            56799999    97 999999999998899999999988755432           222344444444443332     5


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +|+|+++.+.. ......++.++..|  +++.++.
T Consensus       235 ~D~vid~~g~~-~~~~~~~~~l~~~G--~iv~~G~  266 (348)
T 3two_A          235 LDFIISTIPTH-YDLKDYLKLLTYNG--DLALVGL  266 (348)
T ss_dssp             EEEEEECCCSC-CCHHHHHTTEEEEE--EEEECCC
T ss_pred             CCEEEECCCcH-HHHHHHHHHHhcCC--EEEEECC
Confidence            79999998854 23444555555444  7887653

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=94.96  E-value=0.043  Score=48.76  Aligned_cols=39  Identities=10%  Similarity=0.251  Sum_probs=33.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSD  116 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~  116 (349)
                      ++++|.|+    | .|.+|..+++.|.+.|+   +|++.+|+++..+
T Consensus         2 ~~~~I~iI----G-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~   43 (280)
T 3tri_A            2 NTSNITFI----G-GGNMARNIVVGLIANGYDPNRICVTNRSLDKLD   43 (280)
T ss_dssp             CCSCEEEE----S-CSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHH
T ss_pred             CCCEEEEE----c-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHH
Confidence            35789999    5 59999999999999999   9999999886554

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.95  E-value=0.036  Score=50.21  Aligned_cols=39  Identities=31%  Similarity=0.364  Sum_probs=34.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENS  115 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~  115 (349)
                      .+.++|.|+    | .|.+|..+++.|.+.|+  +|++.+|+++..
T Consensus        31 ~~~~kI~II----G-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~   71 (314)
T 3ggo_A           31 LSMQNVLIV----G-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI   71 (314)
T ss_dssp             CSCSEEEEE----S-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             cCCCEEEEE----e-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence            356899999    6 89999999999999999  999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	349
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-20
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-19
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-18
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-17
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-14
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-14
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-13
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-12
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-11
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-11
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-11
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	5e-11
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	3e-07
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-07
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-07
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-06
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	6e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	8e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-04

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 87.5 bits (215), Expect = 3e-20
 Identities = 35/279 (12%), Positives = 83/279 (29%), Gaps = 10/279 (3%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE---I 129
           +K +VLIV    GG   IG  +    +  GH   ++   +  S+  K      F +    
Sbjct: 2   KKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 57

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
           +            +    V  V   +       ++     + +  K +G  +    S  G
Sbjct: 58  LIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFG 117

Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
           +    D   H             +V + I      +         G        +     
Sbjct: 118 MDP--DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSL-AQLDGHM 174

Query: 250 IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 309
           +  +  V I G G          D+ +    ++++P+  +  ++       ++   + ++
Sbjct: 175 MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQI 234

Query: 310 CAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
             + +   ++ ++   +    D K       +V    Y 
Sbjct: 235 WERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQ 273

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 83.7 bits (205), Expect = 6e-19
 Identities = 39/277 (14%), Positives = 83/277 (29%), Gaps = 13/277 (4%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           + ++L++    G    IG ++AK  L  GH   ++      S   +K          ++G
Sbjct: 3   RSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA--QLLESFKASG 56

Query: 134 GKTVWGDPAEVGNVVGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
              V G   +  ++V  V     V+       +++   +    K  G  +  F S  G  
Sbjct: 57  ANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND 116

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
                       V +      +V + I      +         G                
Sbjct: 117 VDNVHAVEPAKSVFEV---KAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLA--QAGLTAP 171

Query: 252 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 311
            +  V I G G          D+ +    AV++P   +  ++  +    ++L+ +  L  
Sbjct: 172 PRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE 231

Query: 312 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMVFIFFYS 348
           +     +E  +   +             N+     +S
Sbjct: 232 KKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHS 268

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 1e-18
 Identities = 56/291 (19%), Positives = 102/291 (35%), Gaps = 39/291 (13%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNEI 129
           +K++LI    +GG   +G +L  +L+  GHEVT++    T    N +         F  I
Sbjct: 1   RKRILI----TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--HENFELI 54

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFI 185
                + ++ +  ++ ++    +    + N  K    N      +   AK  G +  L  
Sbjct: 55  NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLA 113

Query: 186 SSAGIYKPADEPPHVEGDVVKPD-------------AGHVQVEKYISENFSNWASFRPQY 232
           S++ +Y   +  P  E      +                     Y+ +        R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 233 MIGSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 289
             G   + +       F  + ++  P+ + GSG Q     +V DL + L   + +     
Sbjct: 174 TFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--- 230

Query: 290 SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY-----DPKAAGIDAKKA 335
           S+  NL +    T+   A+L     G   EI        DP+    D KKA
Sbjct: 231 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKA 281

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 78.7 bits (193), Expect = 4e-17
 Identities = 42/288 (14%), Positives = 85/288 (29%), Gaps = 33/288 (11%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGD--------ENSDKMKKPPFN 124
           ++L+    +GG   IG +  ++LL   +       + V D         N   +   P  
Sbjct: 2   RLLV----TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRL 57

Query: 125 RFNE--IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSS 177
           RF    I  AG         +        +               N+   + +   A  +
Sbjct: 58  RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA 117

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
           GV + + +S+  +Y   D     E   ++P+           +    Y      +    R
Sbjct: 118 GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITR 177

Query: 230 PQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                G   + +     F   ++    +P+ G G       H  D    + L +    A 
Sbjct: 178 CCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA- 236

Query: 289 SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
              I+++     +T   +  +   + G     V       G D + + 
Sbjct: 237 -GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSL 283

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 71.8 bits (175), Expect = 1e-14
 Identities = 36/297 (12%), Positives = 82/297 (27%), Gaps = 42/297 (14%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           K  LI    +G     G YLA+ LL  G+EV  +     + +  +     +     +   
Sbjct: 2   KVALI----TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKF 57

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAK 175
              +GD    + +  ++  V  D V +                    +      + +  +
Sbjct: 58  HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 176 SSGVKQ---FLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSN 224
             G+++   F   S++ +Y    E P  E     P           +     Y       
Sbjct: 118 FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 177

Query: 225 WASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 279
             +             +   +       +           G+     +  H +D   M  
Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237

Query: 280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 336
           + ++  +      F + +    ++    ++ A   G+ +       +  GI      
Sbjct: 238 MMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTG 291

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 69.9 bits (170), Expect = 4e-14
 Identities = 50/302 (16%), Positives = 98/302 (32%), Gaps = 54/302 (17%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE----NSDKMKK-PPFNRFNE 128
           K++V I     G   ++G  + ++L   G    ++   DE    +S  +       R ++
Sbjct: 2   KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQ 57

Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
           +  A  K                      D   +N+     +   A  + V + LF+ S+
Sbjct: 58  VYLAAAKVGGIVA----------NNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 107

Query: 189 GIY-----KPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIG 235
            IY     +P  E   ++G +   +        AG    E Y  +   ++ S  P  + G
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 236 SGNNKDCEE----------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 285
             +N               +      +   V + GSG       HV D+++     +E  
Sbjct: 168 PHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227

Query: 286 E-------AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDAK 333
                       +  N+ +    T+  +A+  A+  G    +V    K  G     +D  
Sbjct: 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVT 287

Query: 334 KA 335
           + 
Sbjct: 288 RL 289

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 67.7 bits (164), Expect = 2e-13
 Identities = 34/254 (13%), Positives = 66/254 (25%), Gaps = 17/254 (6%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
           +KK + +V    G     G  L +     GH V    V        ++        +   
Sbjct: 2   QKKTIAVV----GATGRQGASLIRVAAAVGHHVRAQ-VHSLKGLIAEELQAIPNVTLFQG 56

Query: 133 GGKTVWGDPAEVGNVVGG--VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
               +  +   +  +  G  + F       G  +   + +AD AK +G  Q    SS   
Sbjct: 57  ---PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 113

Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYMIGSGNNKDCEEWFFDR 249
           +      P      V   A    VE Y+ +            Y     +           
Sbjct: 114 HSLYGPWPA-----VPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELM 168

Query: 250 IVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK 308
                    P         +    D+   L    ++     +     ++   ++   +  
Sbjct: 169 PDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCA 228

Query: 309 LCAQAAGLPVEIVH 322
             ++A    V  V 
Sbjct: 229 AFSRALNRRVTYVQ 242

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 66.9 bits (162), Expect = 5e-13
 Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 34/284 (11%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMK----KPPFN 124
           + K  LI    +G    IG  L + LL    +V  +    T    N D+++    +  ++
Sbjct: 15  QPKVWLI----TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70

Query: 125 RFNEI-------VSAGGKTVWGDPAEVGNVVGGVTFDVV--LDNNGKNLDAVRPVADWAK 175
            F  I                 D       +G V   +   + +N  N+D    +   A+
Sbjct: 71  NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130

Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWAS 227
            + V+ F + +S+  Y      P VE  + KP            +  + +      +   
Sbjct: 131 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190

Query: 228 FRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 282
            R   + G   + +         +   +++   V I G G    +  ++ +      LA 
Sbjct: 191 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 250

Query: 283 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 326
                A + ++N+      +L+ +               H +P 
Sbjct: 251 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV 294

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (152), Expect = 2e-12
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 26/216 (12%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           KK+ I     G     G     + + +G+EVT++     +S ++        + +V    
Sbjct: 4   KKIAIF----GATGQTGLTTLAQAVQAGYEVTVL---VRDSSRLPSEGPRPAHVVVGDVL 56

Query: 135 KTVWGDPAEVG--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
           +    D    G   V+  +     L       +  R +    K+ GV + +  +SA +  
Sbjct: 57  QAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLL- 115

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
              +P  V   +      H+++ K + E+   + +  P                 D+   
Sbjct: 116 --WDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPP-------------HIGDQ-PL 159

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 288
                +   G   + +    DL   +   +   E  
Sbjct: 160 TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD 195

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 62.7 bits (151), Expect = 1e-11
 Identities = 37/289 (12%), Positives = 78/289 (26%), Gaps = 32/289 (11%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------ 126
           E  K+ I    +G    I  ++A+ L   GH V       +N    +    + F      
Sbjct: 14  ENLKISI----TGAGGFIASHIARRLKHEGHYVIASDWK-KNEHMTEDMFCDEFHLVDLR 68

Query: 127 --NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                +                   G            N      + + A+ +G+K+F +
Sbjct: 69  VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 128

Query: 185 ISSAG-------IYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
            SSA        +          +    +P         A     + Y  +        R
Sbjct: 129 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 230 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP---E 286
              + G                 ++          + +    R  + +           +
Sbjct: 189 FHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248

Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA 335
           +      N+ SD  V+++ MA++        + I H+ P   G+  + +
Sbjct: 249 SDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI-HHIPGPEGVRGRNS 296

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 62.3 bits (150), Expect = 2e-11
 Identities = 61/314 (19%), Positives = 115/314 (36%), Gaps = 63/314 (20%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VL+    +GG   IG +   +LL +GH+V I+    +N    K+        +      
Sbjct: 2   RVLV----TGGSGYIGSHTCVQLLQNGHDVIIL----DNLCNSKRSVLPVIERLGGKHPT 53

Query: 136 TVWGD---PAEVGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKS 176
            V GD    A +  ++     D V                L+    N++    +    ++
Sbjct: 54  FVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA 113

Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVV----------KPDAGHVQVEKYISENFSNWA 226
           + VK F+F SSA +Y    + P+VE              K     +  +   ++   + A
Sbjct: 114 ANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173

Query: 227 SFRPQYMIG---SGNNKDCEEWFFDRIV---------RKRPVPIPGSGMQFTNIAHVRDL 274
             R    +G   SG+  +  +   + ++         R+  + I G+     +   VRD 
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233

Query: 275 SSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 327
             ++ LA  +             +I+NL +    ++  +    ++A G PV   H+ P+ 
Sbjct: 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNY-HFAPRR 292

Query: 328 AG------IDAKKA 335
            G       DA KA
Sbjct: 293 EGDLPAYWADASKA 306

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 61.3 bits (148), Expect = 4e-11
 Identities = 38/275 (13%), Positives = 76/275 (27%), Gaps = 57/275 (20%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+LI    +GG   IG  + + ++ +  +  +       +  ++    +  +   S    
Sbjct: 2   KILI----TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE----SLSDISESNRYN 53

Query: 136 TVWGD---PAEVGNVVGGVTFDVV------------LDNNGK----NLDAVRPVADWAKS 176
               D    AE+  +      D V            +         N+     + + A+ 
Sbjct: 54  FEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113

Query: 177 SGVK---------QFLFISSAGIYKPADEPPHVEGDVVKPD------------------A 209
                        +F  IS+  +Y     P  VE  V  P                   +
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKAS 173

Query: 210 GHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNI 268
               V  +                 G  +  +          +  +P+PI G G Q  + 
Sbjct: 174 SDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW 233

Query: 269 AHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL 303
            +V D +  L + V   +A     +N+        
Sbjct: 234 LYVEDHARALHMVVTEGKA--GETYNIGGHNEKKN 266

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (146), Expect = 5e-11
 Identities = 32/308 (10%), Positives = 77/308 (25%), Gaps = 42/308 (13%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP------------- 121
           + V ++   +G     G YLA+ LL  G+EV  +     + +  +               
Sbjct: 1   RNVALI---TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

Query: 122 ----------PFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
                            I       ++   A+    +     +   D +G     +    
Sbjct: 58  MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 117

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFS 223
                    +F   S++ +Y    E P  E     P           +  V  +      
Sbjct: 118 KTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

Query: 224 NWASFRP-----QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 278
              +             +   +          + +      G+     +  H +D    +
Sbjct: 178 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237

Query: 279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 338
            L ++N E      F + +    ++    +      G  +     +    G   +     
Sbjct: 238 WLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVH 294

Query: 339 RNMVFIFF 346
             +   ++
Sbjct: 295 VTVDLKYY 302

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.7 bits (114), Expect = 3e-07
 Identities = 23/262 (8%), Positives = 49/262 (18%), Gaps = 30/262 (11%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
           A    VL+     G     G  + K+L     +               K       ++  
Sbjct: 1   ANLPTVLVT----GASGRTGQIVYKKLKEGSDKF---VAKGLVRSAQGKEKIGGEADVFI 53

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
                          +   V     +       D  +           +    +   G  
Sbjct: 54  GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 113

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 251
              D                V      + +           ++     +           
Sbjct: 114 NQIDAAKVAG----VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYT 169

Query: 252 RKRPVPIPGSGMQFTNIA---------------HVRDLSSMLTLAVENPEAASSNIFNLV 296
             R   +         +                   D++ +   A+   EA  +  F+L 
Sbjct: 170 IIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAK-NKAFDLG 228

Query: 297 SD---RAVTLDGMAKLCAQAAG 315
           S     +        L +Q   
Sbjct: 229 SKPEGTSTPTKDFKALFSQVTS 250

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.2 bits (116), Expect = 3e-07
 Identities = 29/281 (10%), Positives = 75/281 (26%), Gaps = 36/281 (12%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-----TVGDENSDKMKKPPFNRFNEI 129
           +  L+    +G     G YLAK LL  G+ V  +     +       ++      ++ + 
Sbjct: 1   RSALV----TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG 56

Query: 130 ---------VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
                     +                  G +++  +     +   V  + +  +    +
Sbjct: 57  DMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE 116

Query: 181 QFLFISSAGIYKPADEPPHVEGDVVKPD---------AGHVQVEKYISENFSNWASFRPQ 231
              + +S        +    + +               GH     Y      + +S    
Sbjct: 117 TRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176

Query: 232 YMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 286
                    +         V      K+     G+     +     D    + L ++  +
Sbjct: 177 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 236

Query: 287 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPK 326
              ++ + + +    T+  M ++  +  GL     +  DP 
Sbjct: 237 ---ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA 274

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (113), Expect = 7e-07
 Identities = 49/322 (15%), Positives = 93/322 (28%), Gaps = 69/322 (21%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           K VL+    +GG   IG +   EL+ +G++  +     +N          R   +     
Sbjct: 2   KIVLV----TGGAGYIGSHTVVELIENGYDCVVA----DNLSNSTYDSVARLEVLTKHHI 53

Query: 135 KTVWGD---PAEVGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAK 175
                D      +  V      D V                L     N+     + +  +
Sbjct: 54  PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 113

Query: 176 SSGVKQFLFISSAGIY----KPADEPPHVEGDVVKP------------------DAGHVQ 213
              V +F+F SSA +Y    +  +  P  E   + P                       +
Sbjct: 114 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 173

Query: 214 VEKYISENFSNWASFRPQYMIGSGN----NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA 269
             K+    + N     P  +IG       N          + R+  + I G      +  
Sbjct: 174 SWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 233

Query: 270 HVRDLSSMLTLAVENP-----------EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 318
            +RD   ++ LA  +                   +NL S +  T+  +     +A+G+ +
Sbjct: 234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 293

Query: 319 EIVHYDPKAAGI-----DAKKA 335
                  +A  +        +A
Sbjct: 294 PYKVTGRRAGDVLNLTAKPDRA 315

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 47/320 (14%), Positives = 93/320 (29%), Gaps = 69/320 (21%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+LI    +GG   +G  LA   L  G ++ +    D  S K      +  + +     +
Sbjct: 2   KLLI----TGGCGFLGSNLASFALSQGIDLIVF---DNLSRKGATDNLHWLSSL--GNFE 52

Query: 136 TVWGD---PAEVGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKS 176
            V GD     +V  ++     D                    +   N+     + +  + 
Sbjct: 53  FVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQ 112

Query: 177 SGVKQ-FLFISSAGIYKPADEPPHVEGDVVKPD------------------------AGH 211
                  ++ S+  +Y   ++  + E +                             A  
Sbjct: 113 YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 172

Query: 212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---------KRPVPIPGSG 262
             +  Y      N   FR   M G       ++ +     +          +P  I G+G
Sbjct: 173 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 232

Query: 263 MQFTNIAHVRDLSSMLTLAVENPEAASSN--IFNLVSDRAVTLDGMAKLCAQAAGLPVEI 320
            Q  ++ H  D+ S+   A+ N      N          +++L  + KL      + +  
Sbjct: 233 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF 292

Query: 321 VH-----YDPKAAGIDAKKA 335
            +      D +    D KK 
Sbjct: 293 TNLPVRESDQRVFVADIKKI 312

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (106), Expect = 3e-06
 Identities = 30/221 (13%), Positives = 54/221 (24%), Gaps = 12/221 (5%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
           + K V I+    G     G  L KE+L  G    +  +G             +       
Sbjct: 13  QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIG--RRKLTFDEEAYKNVNQEVV 66

Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
             + +    +       G                VR   D+   S               
Sbjct: 67  DFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLL 126

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
            +         +     G V+  K     F  ++ FRP  ++         EW   +   
Sbjct: 127 SSKGADKSSNFLYLQVKGEVE-AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFG 185

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF 293
                +P S     ++  V  +   +   V  P      + 
Sbjct: 186 ----SLPDSWASGHSV-PVVTVVRAMLNNVVRPRDKQMELL 221

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 45.7 bits (107), Expect = 4e-06
 Identities = 35/301 (11%), Positives = 77/301 (25%), Gaps = 47/301 (15%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-------ENSDKMKKPPFNRFN 127
           K +++    +GG   IG      +  +  +V +  +          N + +         
Sbjct: 3   KNIIV----TGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVV 58

Query: 128 ------EIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
                 E+V                     + +        N      + + A+   ++ 
Sbjct: 59  GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF 118

Query: 182 FLFISSAGIY--KPADEP----------PHVEGDVVKPD--------AGHVQVEKYISEN 221
              +S+  +Y   P  E                    P         A  + V+ ++   
Sbjct: 119 H-HVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177

Query: 222 FSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 280
                        G   + +         I+      + G G    +  H  D S+ +  
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237

Query: 281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG------IDAKK 334
            +          + + +D       + +L  +  G P +   +    AG      IDA K
Sbjct: 238 ILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASK 295

Query: 335 A 335
            
Sbjct: 296 L 296

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (106), Expect = 4e-06
 Identities = 57/319 (17%), Positives = 98/319 (30%), Gaps = 63/319 (19%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIVS 131
            +KVL+    +GG   IG +   ELL +G+   ++             P +  R  E+  
Sbjct: 2   AEKVLV----TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG 57

Query: 132 AGGKTVWGD---------------------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPV 170
              +    D                      A +  V  G +    LD    NL     +
Sbjct: 58  RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQL 115

Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF-------- 222
            +  K+ GVK  +F SSA +Y      P  E              K+  E          
Sbjct: 116 LEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD 175

Query: 223 --SNWASFRPQYMIG---SGNNKDCEEWFFDRIV---------RKRPVPIPGSGMQFTNI 268
              N    R     G   SG   +  +   + ++         R+  + + G+     + 
Sbjct: 176 KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235

Query: 269 AHVRDLSSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 321
             VRD   ++ LA  +        E     I+NL +    ++  M +   +A+G  +   
Sbjct: 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYK 295

Query: 322 H-----YDPKAAGIDAKKA 335
                  D  A   +   A
Sbjct: 296 VVARREGDVAACYANPSLA 314

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 45.2 bits (105), Expect = 6e-06
 Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 54/311 (17%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK----PPFNRFNE 128
           E   VL+    +G +  +  ++ ++LL  G++V            ++K        RF  
Sbjct: 10  EGSLVLV----TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFET 65

Query: 129 IVSA--------GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK 180
            V                         V   +              +  +   A +  VK
Sbjct: 66  AVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVK 125

Query: 181 QFLFISSA---GIYKPADEPPHVEGDVVKPD---------------------AGHVQVEK 216
           +F+  SS     I KP  E  +++      +                     A   + E 
Sbjct: 126 RFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185

Query: 217 YI------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQFTN 267
                   ++      +  P Y IG+  + + +       +       V    + M    
Sbjct: 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245

Query: 268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG---LPVEIVHYD 324
                D+  +    +  P+          +      + +     +       P +     
Sbjct: 246 YVSAVDIGLLHLGCLVLPQI--ERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQG 303

Query: 325 PKAAGIDAKKA 335
              +  D   +
Sbjct: 304 QDLSKFDTAPS 314

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 26/230 (11%), Positives = 55/230 (23%), Gaps = 25/230 (10%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
            K+VL+     G   + G +L   +L       ++           +        + +  
Sbjct: 2   PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPA--------RKALAEHPRLDNPV 49

Query: 134 GKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP 193
           G      P   G++               + +A R V      +  K+ L + +      
Sbjct: 50  GPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVV 109

Query: 194 ADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK 253
           +      +  +          +    + +      RP  + G        E     I   
Sbjct: 110 SALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIA-- 167

Query: 254 RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-----SSNIFNLVSD 298
                     ++  I    DL+  L               S  +  L   
Sbjct: 168 -----RILPGKYHGI-EACDLARALWRLALEEGKGVRFVESDELRKLGKG 211

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 41.3 bits (95), Expect = 8e-05
 Identities = 40/261 (15%), Positives = 74/261 (28%), Gaps = 21/261 (8%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSA 132
           K+LI     G +  +G  + K+L G   EV    V D    N   + K  FN     V  
Sbjct: 3   KILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNK-FFNEKKPNV-- 55

Query: 133 GGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
               V    A          +D+    N      +   A    +  V+        G  K
Sbjct: 56  ----VINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAK 111

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR 252
                              ++ E ++      +   R  ++ G GNN         +   
Sbjct: 112 EPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHD 171

Query: 253 KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ 312
           +  V     G   + +   R       + ++  +  +   F+       +    A    +
Sbjct: 172 ELKVVHDQVGTPTSTVDLAR-------VVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFR 224

Query: 313 AAGLPVEIVHYDPKAAGIDAK 333
             G+ V++     +     AK
Sbjct: 225 LTGIDVKVTPCTTEEFPRPAK 245

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.2 bits (95), Expect = 1e-04
 Identities = 34/305 (11%), Positives = 63/305 (20%), Gaps = 47/305 (15%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-----------KMKKPP 122
           +K  LI    +G     G YL + LLG G+EV  +     N +                 
Sbjct: 1   RKIALI----TGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKA 56

Query: 123 FNRF-----------NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
             +               +         + A   +V           +           A
Sbjct: 57  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 116

Query: 172 D--WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISEN 221
                  SG     + + +     +  PP  E     P         A H     Y    
Sbjct: 117 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 222 FSNWASFRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 276
                +            ++              V  +     G+     +     D   
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

Query: 277 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG------I 330
            + L ++  +     +             ++             +               
Sbjct: 237 AMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQG 296

Query: 331 DAKKA 335
           DA KA
Sbjct: 297 DASKA 301

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	349
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.98
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.95
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.93
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.93
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.52
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.49
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.48
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.46
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.44
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.44
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.43
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.43
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.42
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.42
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.42
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.41
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.41
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.41
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.39
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.39
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.38
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.38
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.38
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.37
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.36
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.35
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.35
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.34
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.34
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.34
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.33
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.32
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.32
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.3
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.28
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.27
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.27
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.27
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.25
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.25
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.24
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.22
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.22
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.19
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.19
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.19
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.18
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.18
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.18
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.16
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.15
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.15
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.14
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.13
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.1
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.07
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.06
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.01
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.99
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.95
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.94
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.86
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.8
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.77
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.74
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.74
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.73
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.55
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.48
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.48
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.18
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.08
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.66
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.56
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.47
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.47
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.47
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.43
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.37
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.36
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.36
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.33
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.31
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.24
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.24
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.18
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.16
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.12
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.05
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.99
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.9
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.84
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.83
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.8
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.79
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.78
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.78
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.76
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.76
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.67
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.65
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.63
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.63
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.58
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.55
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.52
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.5
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.47
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.44
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.43
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.42
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.35
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.34
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.21
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.2
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.19
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.14
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.13
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.11
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.09
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.08
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.01
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.97
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	95.95
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.91
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.86
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.84
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.79
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.76
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.72
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.72
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.71
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.55
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.53
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.48
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.34
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.33
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.32
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.32
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.28
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.18
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.15
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.12
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.04
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.02
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.01
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.93
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.82
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.81
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.78
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.73
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.69
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.68
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.68
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	94.59
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.56
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.54
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.53
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.48
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.42
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	94.37
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.2
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.19
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.1
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.07
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	94.03
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.03
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.96
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.79
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	93.79
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.74
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.71
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	93.71
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.7
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.68
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.63
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.62
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.55
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	93.52
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.5
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.42
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.41
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.35
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.27
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.23
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.05
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.03
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.9
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.89
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.83
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.79
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.71
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.7
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.51
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.23
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.2
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.19
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.16
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.04
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.98
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	91.94
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.94
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.9
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.82
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.81
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.8
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.65
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.54
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.52
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.5
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	91.41
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	91.13
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	91.11
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	90.86
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.8
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.63
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.61
d1zgza1	120	TorCAD operon transcriptional regulator TorD, N-te	90.58
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	90.48
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.37
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	90.31
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	90.25
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	90.18
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.99
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	89.96
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	89.87
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.78
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.64
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.42
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.3
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	88.92
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	88.78
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	88.73
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	88.26
d1xhfa1	121	Aerobic respiration control protein ArcA, N-termin	88.0
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.97
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	87.88
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.79
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	87.34
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	87.28
d1e5da1	152	Rubredoxin oxygen:oxidoreductase (ROO), C-terminal	87.13
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.09
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.96
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.76
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.7
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	86.6
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	86.38
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	86.34
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.83
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	85.73
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.7
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	85.44
d1zesa1	121	PhoB receiver domain {Escherichia coli [TaxId: 562	85.37
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	85.37
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.04
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.94
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	84.76
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.68
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	84.36
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	83.78
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	83.5
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	83.4
d1s8na_	190	Probable two-component system transcriptional regu	83.06
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.89
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.87
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.81
d1kgsa2	122	PhoB receiver domain {Thermotoga maritima [TaxId:	82.78
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.72
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	81.7
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	81.39
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.06
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.01
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	80.96
d2pl1a1	119	PhoP receiver domain {Escherichia coli [TaxId: 562	80.95
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	80.9
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	80.85
d1ycga1	149	Nitric oxide reductase C-terminal domain {Moorella	80.79
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	80.43
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	80.28

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.4e-37  Score=285.62  Aligned_cols=236  Identities=14%  Similarity=0.125  Sum_probs=181.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc--cCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      |+||||    |||||||++|+++|+++||+|++++|......  .+...  ........++++++.+|   .+++.++++
T Consensus         2 K~vLIT----GatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (357)
T d1db3a_           2 KVALIT----GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHI--YQDPHTCNPKFHLHYGDLSDTSNLTRILR   75 (357)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHH--HhhhhhcCCCeEEEEeecCCHHHHHHHHh
Confidence            789999    99999999999999999999999999643211  11100  01112233456666665   788888998


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC---cEEEEeccccccCCCCCCCCCCCCCCCCC--
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPD--  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv---~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~--  208 (349)
                      +.++|+|+|+|+.                |+.++.+|+++|++.++   +||||+||..|||.....|++|+++..|.  
T Consensus        76 ~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~  155 (357)
T d1db3a_          76 EVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP  155 (357)
T ss_dssp             HHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSH
T ss_pred             ccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCCh
Confidence            8889999999983                67889999999999865   47999999999998888899999887764  


Q ss_pred             --CChHHHHHHHHhh----CCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCCC-cccCCCCCcceeeeeHHHHHHH
Q 018900          209 --AGHVQVEKYISEN----FSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       209 --~~k~~~ek~~~~~----~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                        .+|+.+|+++.++    +++++++||+++|||+.+...    +..++..+..+++ ..++|++++.++++|++|++++
T Consensus       156 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a  235 (357)
T d1db3a_         156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHH
Confidence              4566666666543    899999999999999866553    3334444455544 4567889999999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  319 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~  319 (349)
                      +..+++++.   +++||+++++.+|+.|+++.+.+.+|....
T Consensus       236 ~~~~~~~~~---~~~yni~sg~~~s~~~~~~~~~~~~g~~~~  274 (357)
T d1db3a_         236 QWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLR  274 (357)
T ss_dssp             HHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEEE
T ss_pred             HHHHHhCCC---CCeEEECCCCceehHHHHHHHHHHhCCccc
Confidence            999998753   479999999999999999999999985433

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-36  Score=273.06  Aligned_cols=252  Identities=21%  Similarity=0.217  Sum_probs=193.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      +||||||    ||+||+|++|+++|+++||+|++++|......+...      .......+++...  +.++.++.+  +
T Consensus         1 kKKIlVt----G~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~------~~~~~~~~d~~~~--~~~~~~~~~--~   66 (312)
T d2b69a1           1 RKRILIT----GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENFELINH--DVVEPLYIE--V   66 (312)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG------GGTTCTTEEEEEC--CTTSCCCCC--C
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH------HhcCCCceEEEeh--HHHHHHHcC--C
Confidence            4799999    999999999999999999999999874422211100      0111122333333  334555543  6


Q ss_pred             cEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC-----CCC----C
Q 018900          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV-----VKP----D  208 (349)
Q Consensus       154 d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~-----~~~----~  208 (349)
                      |+|||+|+.                |+.++.+++++|++.++ +|||+||..|||.....|+.|+..     ..|    .
T Consensus        67 d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~  145 (312)
T d2b69a1          67 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD  145 (312)
T ss_dssp             SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH
T ss_pred             CEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHH
Confidence            999999982                56789999999999987 899999999999877777776542     222    2


Q ss_pred             CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC---chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHH
Q 018900          209 AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA  281 (349)
Q Consensus       209 ~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  281 (349)
                      .+|..+|+++.+    ++++++++||+++|||+....   +++.++.++..++++.++++|.+.++|+|++|++++++.+
T Consensus       146 ~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~  225 (312)
T d2b69a1         146 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL  225 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHH
Confidence            456667776654    489999999999999986543   6788999999999999999999999999999999999999


Q ss_pred             hcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCccc---cCCCcccee
Q 018900          282 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAKK---AFPFRNMVF  343 (349)
Q Consensus       282 ~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~k---~~g~~p~~~  343 (349)
                      ++...   +++||+++++.+++.|+++++++.+|.+.++...+....     ..+..|   .+||+|++-
T Consensus       226 ~~~~~---~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~  292 (312)
T d2b69a1         226 MNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVP  292 (312)
T ss_dssp             HTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSC
T ss_pred             Hhhcc---CCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCC
Confidence            87654   368999999999999999999999999887776554332     223333   489999853

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=4.4e-36  Score=276.24  Aligned_cols=255  Identities=15%  Similarity=0.235  Sum_probs=199.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeE------EEEEcCCCCcccCCCCCCCccc-ceecCCCeEEEcC---hhhH
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV------TIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGD---PAEV  144 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V------~~l~R~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~D---~~~l  144 (349)
                      ||||||    ||+||||++|+++|+++||+|      +++++.......      .... .....+++++.+|   ....
T Consensus         1 MkIlIt----G~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~~~   70 (322)
T d1r6da_           1 MRLLVT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR------ANLAPVDADPRLRFVHGDIRDAGLL   70 (322)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG------GGGGGGTTCTTEEEEECCTTCHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH------hHhhhhhcCCCeEEEEeccccchhh
Confidence            689999    999999999999999999854      444432211110      0011 1123467788887   3344


Q ss_pred             HhhhcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~  208 (349)
                      .....  .+|.|+|+|+.                |+.++.+++++|++.++++|||+||..+||.....+++|+.+..|.
T Consensus        71 ~~~~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~  148 (322)
T d1r6da_          71 ARELR--GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (322)
T ss_dssp             HHHTT--TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             hcccc--ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC
Confidence            44443  36999999973                6788999999999999999999999999999888899999887764


Q ss_pred             ----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          209 ----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       209 ----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                          .+|..+|+++++    ++++++++||+++|||+.... ++..++.++..++++.++++|++.++|+|++|+|+++.
T Consensus       149 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~  228 (322)
T d1r6da_         149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA  228 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence                456666666654    389999999999999987654 78889999999999999999999999999999999999


Q ss_pred             HHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeE-EcCCCcc-----CCCccc---cCCCcccee
Q 018900          280 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV-HYDPKAA-----GIDAKK---AFPFRNMVF  343 (349)
Q Consensus       280 ~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~-~~~~~~~-----~~~~~k---~~g~~p~~~  343 (349)
                      .+++++..  +++||+++++.+++.|+++.+.+.+|.+.+.. ..+....     ..+..|   .+||+|++-
T Consensus       229 ~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~  299 (322)
T d1r6da_         229 LVLAGGRA--GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVS  299 (322)
T ss_dssp             HHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSC
T ss_pred             HHHhCCCC--CCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCC
Confidence            99998775  57999999999999999999999999885533 3332222     244444   499999863

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.9e-35  Score=272.83  Aligned_cols=241  Identities=19%  Similarity=0.176  Sum_probs=190.2

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhh---HHhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE---VGNV  147 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~---l~~~  147 (349)
                      ..++|+||||    |||||||++|+++|+++||+|++++|.......-..............+++++.+|..+   +...
T Consensus        13 ~~~~k~iLVT----G~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~   88 (341)
T d1sb8a_          13 PAQPKVWLIT----GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA   88 (341)
T ss_dssp             HHSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred             CCCCCEEEEe----cCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc
Confidence            3457899999    99999999999999999999999997432111000000000012223467788888433   3333


Q ss_pred             hcCCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC---
Q 018900          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---  208 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~---  208 (349)
                      ...  ++.|+|+++                .|+.++.+++++|++.++++|||+||..+||...+.|++|+.+..|.   
T Consensus        89 ~~~--~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  166 (341)
T d1sb8a_          89 CAG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY  166 (341)
T ss_dssp             HTT--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred             ccc--ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcc
Confidence            333  599999887                25789999999999999999999999999999888899999988765   


Q ss_pred             -CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          209 -AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       209 -~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                       .+|..+|+++..    .+++++++||+++||++....     ++..++..+..|+++.++|+|.+.++|+|++|++.++
T Consensus       167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~  246 (341)
T d1sb8a_         167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN  246 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhh
Confidence             345556665543    379999999999999976533     6778889999999999999999999999999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC
Q 018900          279 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~  317 (349)
                      ..++..+....+++||+++++.+|+.|+++.+.+.++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~  285 (341)
T d1sb8a_         247 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAEN  285 (341)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHT
T ss_pred             hhhhhccccccceeeeecccccchHHHHHHHHHHHhccc
Confidence            999988765555899999999999999999999998744

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.2e-34  Score=271.06  Aligned_cols=257  Identities=16%  Similarity=0.181  Sum_probs=192.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      ||||||    ||+||||++|+++|++.||+|++..++........     .+.. ...++++++.+|   .+.+.+++.+
T Consensus         1 MkILIt----G~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   71 (361)
T d1kewa_           1 MKILIT----GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE-----SLSDISESNRYNFEHADICDSAEITRIFEQ   71 (361)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGG-----GGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHH-----HHHhhhhcCCcEEEEccCCCHHHHHHHHHh
Confidence            589999    99999999999999999998655554332111100     1111 112467777777   6778888888


Q ss_pred             CCccEEEeCCCC----------------ChhhHHHHHHHHHhCC---------CcEEEEeccccccCCCCCCCCC-----
Q 018900          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSG---------VKQFLFISSAGIYKPADEPPHV-----  200 (349)
Q Consensus       151 ~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~g---------v~~~i~~Ss~~vy~~~~~~~~~-----  200 (349)
                      .++|+|||+|+.                |+.++.+++++|++.+         +++||++||..|||.....+..     
T Consensus        72 ~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          72 YQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             CCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            789999999983                5678999999998864         4599999999999975433322     


Q ss_pred             -----CCCCCCC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcce
Q 018900          201 -----EGDVVKP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       201 -----e~~~~~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                           |..+..|    +.+|..+|+++.+    ++++++++||+++|||+...+ +++.++..+..++++.++|+|++.+
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r  231 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIR  231 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEE
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEE
Confidence                 2222322    2346666776654    489999999999999987654 6788999999999999999999999


Q ss_pred             eeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC--------CceeEEcCCC-----ccCCCcc
Q 018900          267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL--------PVEIVHYDPK-----AAGIDAK  333 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~--------~~~~~~~~~~-----~~~~~~~  333 (349)
                      +|+|++|+|+++..+++++..  +++||+++++.+++.|+++.+.+.++.        +..+...+..     ....+..
T Consensus       232 ~~i~v~D~a~ai~~~~~~~~~--~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  309 (361)
T d1kewa_         232 DWLYVEDHARALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAG  309 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCH
T ss_pred             eCEEHHHHHHHHHHHHhcCCC--CCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHH
Confidence            999999999999999998765  479999999999999999999987642        2233333222     1223433


Q ss_pred             ---ccCCCccce
Q 018900          334 ---KAFPFRNMV  342 (349)
Q Consensus       334 ---k~~g~~p~~  342 (349)
                         +.|||+|+.
T Consensus       310 k~~~~lgw~P~~  321 (361)
T d1kewa_         310 KISRELGWKPLE  321 (361)
T ss_dssp             HHHHHHCCCCSC
T ss_pred             HHHHHHCCCCCC
Confidence               349999975

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-34  Score=264.05  Aligned_cols=261  Identities=22%  Similarity=0.280  Sum_probs=194.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      ||||||    ||+||||++|++.|+++||+|++++|-.......    ......+...+++++.+|   .+.+.++++..
T Consensus         1 MKiLIt----G~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   72 (338)
T d1udca_           1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV----LPVIERLGGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH----HHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhh----HHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc
Confidence            679999    9999999999999999999999998754322110    011223445678888888   67788888877


Q ss_pred             CccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC-----CC
Q 018900          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD-----AG  210 (349)
Q Consensus       152 ~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~-----~~  210 (349)
                      ++|+|||+|+                .|+.++.+++++|++.++++||++||..+|+.....+..|..+...+     .+
T Consensus        73 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~s  152 (338)
T d1udca_          73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHH
Confidence            7899999997                26789999999999999999999999999988766666555543322     34


Q ss_pred             hHHHHHHHHh-----hCCcEEEEecCceeeCCCCCC-----------chHHHHHHHHh-CCCcccCC------CCCccee
Q 018900          211 HVQVEKYISE-----NFSNWASFRPQYMIGSGNNKD-----------CEEWFFDRIVR-KRPVPIPG------SGMQFTN  267 (349)
Q Consensus       211 k~~~ek~~~~-----~~~~~~ilR~~~v~g~~~~~~-----------~~~~~~~~~~~-~~~~~~~~------~~~~~~~  267 (349)
                      |..+|+++.+     .+++++++|++++||++....           ++..++..+.. +.++.++|      ++.+.++
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd  232 (338)
T d1udca_         153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEEC
T ss_pred             HhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceee
Confidence            5556666554     278999999999999865321           33444444443 34555554      4778899


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCccc---cCCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAKK---AFPF  338 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~k---~~g~  338 (349)
                      |+|++|++.++..+...... ..+++||+++++.+++.|+++.+.+.+|.++++...+...     ...+..|   .|||
T Consensus       233 ~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw  312 (338)
T d1udca_         233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNW  312 (338)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCC
T ss_pred             EEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHHHHHHHCC
Confidence            99999999988887764332 2247999999999999999999999999988877765533     2234443   4999


Q ss_pred             cccee
Q 018900          339 RNMVF  343 (349)
Q Consensus       339 ~p~~~  343 (349)
                      +|++-
T Consensus       313 kp~~~  317 (338)
T d1udca_         313 RVTRT  317 (338)
T ss_dssp             CCCCC
T ss_pred             CcCCC
Confidence            99763

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.5e-33  Score=261.77  Aligned_cols=250  Identities=16%  Similarity=0.123  Sum_probs=191.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +.||||||    ||+||||++|+++|+++||+|++++|.......           ......++..+|   .+.+..+++
T Consensus        14 ~nMKILVT----GgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~   78 (363)
T d2c5aa1          14 ENLKISIT----GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------EDMFCDEFHLVDLRVMENCLKVTE   78 (363)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-----------GGGTCSEEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-----------hhcccCcEEEeechhHHHHHHHhh
Confidence            57889999    999999999999999999999999986533210           111244566667   445555555


Q ss_pred             CCCccEEEeCCCC-----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCC-------CCC
Q 018900          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-------DVV  205 (349)
Q Consensus       150 ~~~~d~Vi~~a~~-----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~-------~~~  205 (349)
                      +  +|+|||+++.                 |+.++.+++++|++.+++|||++||..+|+.....+..|.       .+.
T Consensus        79 ~--~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~  156 (363)
T d2c5aa1          79 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  156 (363)
T ss_dssp             T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             c--CCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcC
Confidence            4  5999999972                 5788999999999999999999999999997655444433       222


Q ss_pred             CC----CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC------chHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          206 KP----DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       206 ~~----~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                      .|    ..+|..+|+++.+    ++++++++||+++||++....      ....+........+...+++|.+.++|+|+
T Consensus       157 ~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v  236 (363)
T d2c5aa1         157 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI  236 (363)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeeh
Confidence            22    2456667776654    389999999999999976433      233334455567777888999999999999


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc----CCCccc---cCCCccce
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA----GIDAKK---AFPFRNMV  342 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~----~~~~~k---~~g~~p~~  342 (349)
                      +|++++++.+++.+.   +++||+++++.+++.|+++.+.+.+|.+.++..++.+..    ..+..|   .|||+|++
T Consensus       237 ~D~~~~~~~~~~~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~  311 (363)
T d2c5aa1         237 DECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNM  311 (363)
T ss_dssp             HHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSCCCCC
T ss_pred             hHHHHHHHHHHhCCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHhCCCCCC
Confidence            999999999998753   379999999999999999999999999888777665432    123333   49999975

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-32  Score=254.31  Aligned_cols=239  Identities=15%  Similarity=0.115  Sum_probs=186.2

Q ss_pred             eEE-EEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCC-CCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           75 KKV-LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-KPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~V-LVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ||| |||    ||+||||++|+++|+++||+|++++|......... .............+++++.+|   .+.+..++.
T Consensus         1 kKI~LVT----G~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   76 (347)
T d1t2aa_           1 RNVALIT----GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIIN   76 (347)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHh
Confidence            578 999    99999999999999999999999999654321100 000001112223467788877   677888888


Q ss_pred             CCCccEEEeCCC----------------CChhhHHHHHHHHHhCCC---cEEEEeccccccCCCCCCCCCCCCCCCCC--
Q 018900          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPD--  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv---~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~--  208 (349)
                      +..+++|+|+++                .|+.++.+++++|++.++   ++|||+||..|||...+.|++|+++..|.  
T Consensus        77 ~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~  156 (347)
T d1t2aa_          77 EVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSP  156 (347)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSH
T ss_pred             hcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCH
Confidence            888899999987                257789999999999875   48999999999998888899999887664  


Q ss_pred             --CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCc-----hHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHH
Q 018900          209 --AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  277 (349)
Q Consensus       209 --~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  277 (349)
                        .+|..+|+++.+    ++++++++||+++|||+.....     ...++.....+.+..++|++++.++|+|++|++++
T Consensus       157 Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a  236 (347)
T d1t2aa_         157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA  236 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHH
Confidence              456777777654    3899999999999999765542     22234444557778888999999999999999999


Q ss_pred             HHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCcee
Q 018900          278 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI  320 (349)
Q Consensus       278 ~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~  320 (349)
                      +..++++...   +.|+++.+...++.++...+...++..+..
T Consensus       237 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (347)
T d1t2aa_         237 MWLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVW  276 (347)
T ss_dssp             HHHHHHSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEEE
T ss_pred             HHHHhhcCCC---ccceeccccccccchhhhhhhhhhcceeee
Confidence            9999998764   569999988999999999999999987543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-32  Score=251.73  Aligned_cols=266  Identities=18%  Similarity=0.198  Sum_probs=194.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCC--CCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      |.||||||    ||+||||++|+++|+++||+|++++|...........  ...+..++...+++++.+|   .+.+..+
T Consensus         1 M~kKILIT----G~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   76 (346)
T d1ek6a_           1 MAEKVLVT----GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRL   76 (346)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCeEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccc
Confidence            56799999    9999999999999999999999998743322211111  0111224455678888887   5677777


Q ss_pred             hcCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCC-
Q 018900          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG-  210 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~-  210 (349)
                      +.+..+++|+|+|+.                |+.++.++++++++.++++||++||..+|+........+........+ 
T Consensus        77 ~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~  156 (346)
T d1ek6a_          77 FKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP  156 (346)
T ss_dssp             HHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSH
T ss_pred             ccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCCh
Confidence            888888999999983                578899999999999999999999999999876554444443333334 


Q ss_pred             ----hHHHHHHHHh-----hCCcEEEEecCceeeCCCCC-----------CchHHHHHHHHh-CCCcccC------CCCC
Q 018900          211 ----HVQVEKYISE-----NFSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVR-KRPVPIP------GSGM  263 (349)
Q Consensus       211 ----k~~~ek~~~~-----~~~~~~ilR~~~v~g~~~~~-----------~~~~~~~~~~~~-~~~~~~~------~~~~  263 (349)
                          |..+|+.+.+     .+++++++|++.+||+....           .++..++..+.. +.++.++      .++.
T Consensus       157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~  236 (346)
T d1ek6a_         157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCC
Confidence                4445554443     38999999999999986432           134444444433 4444443      3577


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCccC-----CCc---cc
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDA---KK  334 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~~-----~~~---~k  334 (349)
                      +.++|+|++|+|.++..+++.... ..+++||+++++.+++.|+++.+.+.+|.++++.+.+.+..+     .+.   ++
T Consensus       237 ~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~~~~d~~k~~~  316 (346)
T d1ek6a_         237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQE  316 (346)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHH
T ss_pred             eeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCEeeECHHHHHH
Confidence            789999999999999888665433 234799999999999999999999999998888777655432     233   34


Q ss_pred             cCCCccce
Q 018900          335 AFPFRNMV  342 (349)
Q Consensus       335 ~~g~~p~~  342 (349)
                      .|||+|++
T Consensus       317 ~lgw~p~~  324 (346)
T d1ek6a_         317 ELGWTAAL  324 (346)
T ss_dssp             TTCCCCCC
T ss_pred             HHCCCcCC
Confidence            49999976

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=4.5e-32  Score=251.68  Aligned_cols=257  Identities=14%  Similarity=0.161  Sum_probs=196.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .|||||||    |||||||++|+++|+++||+|.++.++......    .......+...+++++.+|   .+.+..++.
T Consensus         1 ~~mkILVT----GgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~----~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~   72 (346)
T d1oc2a_           1 QFKNIIVT----GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG----NKANLEAILGDRVELVVGDIADAELVDKLAA   72 (346)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC----CGGGTGGGCSSSEEEEECCTTCHHHHHHHHT
T ss_pred             CcCEEEEe----CCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccc----cHHHHHHhhcCCeEEEEccCCCHHHHHHHHh
Confidence            47899999    999999999999999999987777664321110    0112234455678888887   577777777


Q ss_pred             CCCccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCC------------CCCCCCC
Q 018900          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------------DEPPHVE  201 (349)
Q Consensus       150 ~~~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~------------~~~~~~e  201 (349)
                      ..  |.|+|+|+                .|+.++.+++++++..+. ++|++||..+||..            ....+.|
T Consensus        73 ~~--~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e  149 (346)
T d1oc2a_          73 KA--DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA  149 (346)
T ss_dssp             TC--SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred             hh--hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCccccccc
Confidence            65  88999988                267899999999999885 89999999999842            1123344


Q ss_pred             CCCCCCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCC-CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          202 GDVVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       202 ~~~~~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      +.+..|.    .+|+.+|+++.+    .+++++++||+++|||+... ..+..++..+..+.++.+++++++.++|+|++
T Consensus       150 ~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~  229 (346)
T d1oc2a_         150 ETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTN  229 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchh
Confidence            4444432    346777776654    48999999999999997654 36777788888999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCC-ceeEEcCCCcc-----CCCccc---cCCCccce
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAA-----GIDAKK---AFPFRNMV  342 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~-~~~~~~~~~~~-----~~~~~k---~~g~~p~~  342 (349)
                      |++++++.+++++..  ++.|++++++..++.|+++.+.+.++.+ ..+..++.+..     ..+..|   .|||+|+.
T Consensus       230 D~a~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~  306 (346)
T d1oc2a_         230 DHSTGVWAILTKGRM--GETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQF  306 (346)
T ss_dssp             HHHHHHHHHHHHCCT--TCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSC
T ss_pred             hHHHHHHHHHhhccc--CccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcC
Confidence            999999999988766  4799999999999999999999999875 33444433222     234443   49999975

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-32  Score=250.56  Aligned_cols=244  Identities=18%  Similarity=0.247  Sum_probs=192.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      +||||||    |||||||++|+++|+++||.|+++++..+                      +...|.+.+.+++...++
T Consensus         2 kkkIlIT----G~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~~~~   55 (315)
T d1e6ua_           2 KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASERI   55 (315)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhhcCC
Confidence            5799999    99999999999999999999887765431                      112367888888888779


Q ss_pred             cEEEeCCC-----------------CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCC---------C
Q 018900          154 DVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK---------P  207 (349)
Q Consensus       154 d~Vi~~a~-----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~---------~  207 (349)
                      |.|+|+++                 .|+.++.+++++|++.+++||||+||.+|||.....+++|+.+..         |
T Consensus        56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y  135 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY  135 (315)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHH
T ss_pred             CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHH
Confidence            99999986                 367899999999999999999999999999988777777764322         2


Q ss_pred             CCChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC-----c-----hHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          208 DAGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD-----C-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       208 ~~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                      ..+|..+|+++.+    .+++++++||+++|||+....     +     ...+......+.++.+.+++.+.++++|++|
T Consensus       136 ~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d  215 (315)
T d1e6ua_         136 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD  215 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeeh
Confidence            3456667776653    489999999999999976533     1     2223445556788888999999999999999


Q ss_pred             HHHHHHHHhcCCCc-------cCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCcc-----CCCcc--ccCCCc
Q 018900          274 LSSMLTLAVENPEA-------ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA-----GIDAK--KAFPFR  339 (349)
Q Consensus       274 va~~~~~~~~~~~~-------~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~-----~~~~~--k~~g~~  339 (349)
                      +++++..++++...       .....++++.++..+..++++.+.+.+|.+..+...+.+..     ..+.+  +.|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~  295 (315)
T d1e6ua_         216 MAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWY  295 (315)
T ss_dssp             HHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHHTTCC
T ss_pred             hHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHHHcCCC
Confidence            99999999977632       12368999999999999999999999999988776554332     22333  359999


Q ss_pred             ccee
Q 018900          340 NMVF  343 (349)
Q Consensus       340 p~~~  343 (349)
                      |++-
T Consensus       296 p~~~  299 (315)
T d1e6ua_         296 HEIS  299 (315)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-32  Score=251.21  Aligned_cols=231  Identities=18%  Similarity=0.205  Sum_probs=180.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHh-hhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGN-VVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~-~~~  149 (349)
                      ||||||    ||+||||++|+++|+++| ++|+++++......++.          ..++++++.+|.   +++.+ +++
T Consensus         1 MKILIT----G~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----------~~~~~~~i~~Di~~~~~~~~~~~~   66 (342)
T d2blla1           1 MRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYHVK   66 (342)
T ss_dssp             CEEEEE----TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------TCTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----------cCCCeEEEECccCChHHHHHHHHh
Confidence            589999    999999999999999999 48999998765443322          134678888883   34433 444


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC------CC
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------KP  207 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~------~~  207 (349)
                        ++|+|||+|+.                |+.++.+++++|++.++ +++++||..+|+........|....      ..
T Consensus        67 --~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (342)
T d2blla1          67 --KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (342)
T ss_dssp             --HCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             --CCCccccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCC
Confidence              36999999983                57889999999999987 6678899999998765555443321      11


Q ss_pred             C-----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC---------chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          208 D-----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD---------CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       208 ~-----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      +     .+|..+|+++.+    ++++++++|++.+||++....         .+..++.+++.|+++.++++|++.++|+
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i  223 (342)
T d2blla1         144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  223 (342)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred             CcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeec
Confidence            1     245566665544    389999999999999865432         4677889999999999999999999999


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC-ccCHHHHHHHHHHHhCCCceeEE
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR-AVTLDGMAKLCAQAAGLPVEIVH  322 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~-~~t~~el~~~~~~~~g~~~~~~~  322 (349)
                      |++|+++++..+++++.. ..+++||+++++ .+|+.|+++.+.+.+|.+.....
T Consensus       224 ~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~  278 (342)
T d2blla1         224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH  278 (342)
T ss_dssp             EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGG
T ss_pred             ccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccc
Confidence            999999999999998643 345899998875 58999999999999987654433

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=3.9e-32  Score=249.05  Aligned_cols=256  Identities=14%  Similarity=0.080  Sum_probs=194.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccce-ecCCCeEEEcC---hhhHHhhhcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      |+||||    |||||||++|+++|+++||+|++++|......      ..++..+ ..++++++.+|   .+.+.+.+..
T Consensus         1 k~vLIt----G~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~------~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   70 (321)
T d1rpna_           1 RSALVT----GITGQDGAYLAKLLLEKGYRVHGLVARRSSDT------RWRLRELGIEGDIQYEDGDMADACSVQRAVIK   70 (321)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC------CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCCccc------HHHHHHhcccCCcEEEEccccChHHhhhhhcc
Confidence            689999    99999999999999999999999999763321      0111111 23467778877   6677777777


Q ss_pred             CCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-cEEEEeccccccCCCCCCCCCCCCCCCCC----C
Q 018900          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPD----A  209 (349)
Q Consensus       151 ~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~  209 (349)
                      ..+++++|+++.                |+.++.+++++|++.++ ++|++.||..+|+.....+.+|+.+..+.    .
T Consensus        71 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~  150 (321)
T d1rpna_          71 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGV  150 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             ccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHH
Confidence            667899998872                57889999999999885 57888999999998887788888776654    3


Q ss_pred             ChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCc----hHHHHHHHHhCC-CcccCCCCCcceeeeeHHHHHHHHHH
Q 018900          210 GHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTL  280 (349)
Q Consensus       210 ~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~  280 (349)
                      +|..+|+++.+    ++++++++||+++|||......    +..++.++..++ +...+|++++.++|+|++|++++++.
T Consensus       151 sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~  230 (321)
T d1rpna_         151 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL  230 (321)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHH
Confidence            45666766654    4899999999999999765542    333445555544 44567899999999999999999999


Q ss_pred             HhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCce-eEEcCCC--------ccCCCcc---ccCCCcccee
Q 018900          281 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPK--------AAGIDAK---KAFPFRNMVF  343 (349)
Q Consensus       281 ~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~-~~~~~~~--------~~~~~~~---k~~g~~p~~~  343 (349)
                      +++++..   +.||+++++.+++.++++.+.+.+|.+.+ +..+++.        ....+..   +.|||+|++-
T Consensus       231 ~~~~~~~---~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~  302 (321)
T d1rpna_         231 MLQQDKA---DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTS  302 (321)
T ss_dssp             HHHSSSC---CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSC
T ss_pred             HHhcCCc---CCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCC
Confidence            9998764   67999999999999999999999998643 2222221        1222333   4599999763

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=1.3e-31  Score=252.70  Aligned_cols=265  Identities=17%  Similarity=0.183  Sum_probs=190.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC----------CCCcccCCCC--CCCcccceecCCCeEEEcC-
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG----------DENSDKMKKP--PFNRFNEIVSAGGKTVWGD-  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~----------~~~~~~~~~~--~~~~~~~l~~~~~~~~~~D-  140 (349)
                      +||||||    ||+||||++|+++|+++||+|++++.-          ..........  ...++..+...+++++.+| 
T Consensus         1 g~kILVT----GatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl   76 (393)
T d1i24a_           1 GSRVMVI----GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   76 (393)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccC
Confidence            5899999    999999999999999999999999721          1111110000  0011223345678898888 


Q ss_pred             --hhhHHhhhcCCCccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCc-EEEEeccccccCCCCCCC
Q 018900          141 --PAEVGNVVGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPP  198 (349)
Q Consensus       141 --~~~l~~~~~~~~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~~gv~-~~i~~Ss~~vy~~~~~~~  198 (349)
                        .+.+++++.+.++|+|||+|+.                   |+.++.+++++|++.+++ +|++.||..+|+.... +
T Consensus        77 ~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~  155 (393)
T d1i24a_          77 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-D  155 (393)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-C
T ss_pred             CCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-c
Confidence              5778888988889999999972                   578899999999998864 6788888888876542 2


Q ss_pred             CCCCC--------------CCCC----CCChHHHHHHHH----hhCCcEEEEecCceeeCCCCCC---------------
Q 018900          199 HVEGD--------------VVKP----DAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNKD---------------  241 (349)
Q Consensus       199 ~~e~~--------------~~~~----~~~k~~~ek~~~----~~~~~~~ilR~~~v~g~~~~~~---------------  241 (349)
                      ..|..              +..|    ..+|+.+|+++.    +++++++++||+++|||+....               
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  235 (393)
T d1i24a_         156 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV  235 (393)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred             cccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccc
Confidence            22211              1121    234555555553    3489999999999999975421               


Q ss_pred             ---chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe-eCCCccCHHHHHHHHHHHh---
Q 018900          242 ---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL-VSDRAVTLDGMAKLCAQAA---  314 (349)
Q Consensus       242 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i-~~~~~~t~~el~~~~~~~~---  314 (349)
                         .+..++.++..++++.++|++.+.++|+|++|+++++..+++++...+ +.+.+ .+++.+++.|+++++.++.   
T Consensus       236 ~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g-~~~~~~~~~~~~si~el~~~i~~~~~~~  314 (393)
T d1i24a_         236 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAG-EFRVFNQFTEQFSVNELASLVTKAGSKL  314 (393)
T ss_dssp             TCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTT-CEEEEEECSEEEEHHHHHHHHHHHHHTT
T ss_pred             cccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccc-eeeeecCCCCeeEHHHHHHHHHHHHHhh
Confidence               467788889999999999999999999999999999999999877643 33322 3456799999999998875   


Q ss_pred             CCCceeEEcCCCcc-------CCCccc--cCCCccceee
Q 018900          315 GLPVEIVHYDPKAA-------GIDAKK--AFPFRNMVFI  344 (349)
Q Consensus       315 g~~~~~~~~~~~~~-------~~~~~k--~~g~~p~~~~  344 (349)
                      |.+++....+.+..       ..+.+|  .|||+|++..
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~  353 (393)
T d1i24a_         315 GLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLS  353 (393)
T ss_dssp             TCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCC
T ss_pred             CCCcceeeccCCCCCCCccEecCCHHHHHHcCCccccCH
Confidence            55666665544322       223333  4999998744

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=2.1e-30  Score=239.13  Aligned_cols=261  Identities=15%  Similarity=0.135  Sum_probs=185.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc--ccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      +|+||||    |||||||++|+++|+++||+|++++|.....  .++... ......+....++++.+|   .+.+...+
T Consensus         1 ~k~~LVT----GatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Di~~~~~~~~~~   75 (339)
T d1n7ha_           1 RKIALIT----GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHI-YIDPHNVNKALMKLHYADLTDASSLRRWI   75 (339)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTT-C--------CCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----CCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhh-hhhhhhccccceEEEEccccCHHHHHHHH
Confidence            4789999    9999999999999999999999999965321  111111 111123334567778887   56677778


Q ss_pred             cCCCccEEEeCCCC----------------ChhhHHHHHHHHHhCC-----CcEEEEeccccccCCCCCCCCCCCCCCCC
Q 018900          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSG-----VKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~g-----v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  207 (349)
                      +..++|+|||+|+.                |+.++.+++++++..+     ..++++.||..+|+... .+++|+.+..|
T Consensus        76 ~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p  154 (339)
T d1n7ha_          76 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHP  154 (339)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCC
T ss_pred             hhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCC
Confidence            77789999999983                4567888999887643     45788888888887765 57888887766


Q ss_pred             C----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCCchHH----HHHHHH-hCCCcccCCCCCcceeeeeHHHH
Q 018900          208 D----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKDCEEW----FFDRIV-RKRPVPIPGSGMQFTNIAHVRDL  274 (349)
Q Consensus       208 ~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dv  274 (349)
                      .    .+|..+|+++.+    ++++++++||+++|||+........    .+.... ...+..+.|++.+.++++|++|+
T Consensus       155 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~  234 (339)
T d1n7ha_         155 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY  234 (339)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehH
Confidence            4    234555555433    4899999999999999866553222    222333 34555677889999999999999


Q ss_pred             HHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCCCcee-EEcCC--------CccCCCcc---ccCCCccce
Q 018900          275 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDP--------KAAGIDAK---KAFPFRNMV  342 (349)
Q Consensus       275 a~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~-~~~~~--------~~~~~~~~---k~~g~~p~~  342 (349)
                      ++++..+++++..   ..+++..+...+..++++.+.+.+|...+. ..+..        .....+..   +.|||+|++
T Consensus       235 a~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~  311 (339)
T d1n7ha_         235 VEAMWLMLQQEKP---DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQV  311 (339)
T ss_dssp             HHHHHHHHTSSSC---CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred             HHHHHHHHhcCCC---CccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCC
Confidence            9999999999764   567777788899999999999999976331 11111        11122333   349999986


Q ss_pred             e
Q 018900          343 F  343 (349)
Q Consensus       343 ~  343 (349)
                      -
T Consensus       312 ~  312 (339)
T d1n7ha_         312 G  312 (339)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.97  E-value=1.4e-29  Score=238.01  Aligned_cols=266  Identities=18%  Similarity=0.232  Sum_probs=188.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCC------------CCCcccceecCCCeEEEcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKP------------PFNRFNEIVSAGGKTVWGD  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~D  140 (349)
                      .||||||    ||+||||++|+++|++ .||+|+++++-..........            ............+.++.+|
T Consensus         2 ~MKVLIT----G~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (383)
T d1gy8a_           2 HMRVLVC----GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (383)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             cCEEEEe----CCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECc
Confidence            4699999    9999999999999996 689999998522111000000            0000011223456777777


Q ss_pred             ---hhhHHhhhcCCC-ccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCC----
Q 018900          141 ---PAEVGNVVGGVT-FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE----  196 (349)
Q Consensus       141 ---~~~l~~~~~~~~-~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~----  196 (349)
                         .+.++++++..+ +|+|+|+|+.                |+.++.++++++++.++++++++|+..+|+....    
T Consensus        78 i~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  157 (383)
T d1gy8a_          78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (383)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             ccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccc
Confidence               567888887654 6999999983                5788999999999999999999999998876433    


Q ss_pred             ---CCCCCCCCCCCC----CChHHHHHHHHh----hCCcEEEEecCceeeCCCCCC----------chHHHHHHHH----
Q 018900          197 ---PPHVEGDVVKPD----AGHVQVEKYISE----NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIV----  251 (349)
Q Consensus       197 ---~~~~e~~~~~~~----~~k~~~ek~~~~----~~~~~~ilR~~~v~g~~~~~~----------~~~~~~~~~~----  251 (349)
                         .++.|+.+..|.    .+|...|+++.+    ++++++++|++++|||+....          +++.++.++.    
T Consensus       158 ~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~  237 (383)
T d1gy8a_         158 TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA  237 (383)
T ss_dssp             -CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred             ccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcc
Confidence               344555554442    346666666655    489999999999999987643          2233333332    


Q ss_pred             ------------hCCCcccCC------CCCcceeeeeHHHHHHHHHHHhcCCC-------ccCCCEEEeeCCCccCHHHH
Q 018900          252 ------------RKRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPE-------AASSNIFNLVSDRAVTLDGM  306 (349)
Q Consensus       252 ------------~~~~~~~~~------~~~~~~~~i~v~Dva~~~~~~~~~~~-------~~~~~~~~i~~~~~~t~~el  306 (349)
                                  .+.++.++|      +|.+.++|+|++|++++++.+++...       ...+++||+++++++++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el  317 (383)
T d1gy8a_         238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREV  317 (383)
T ss_dssp             CC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHH
T ss_pred             ccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHH
Confidence                        234444443      57888999999999999999987432       12247999999999999999


Q ss_pred             HHHHHHHhCCCceeEEcCCCccC-----CCc---cccCCCcccee
Q 018900          307 AKLCAQAAGLPVEIVHYDPKAAG-----IDA---KKAFPFRNMVF  343 (349)
Q Consensus       307 ~~~~~~~~g~~~~~~~~~~~~~~-----~~~---~k~~g~~p~~~  343 (349)
                      ++.+.+.+|.++++...+.+..+     .+.   ++.|||+|++-
T Consensus       318 ~~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~  362 (383)
T d1gy8a_         318 IEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYD  362 (383)
T ss_dssp             HHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCC
T ss_pred             HHHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCC
Confidence            99999999999888776654322     233   33499999853

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=2.4e-30  Score=232.23  Aligned_cols=233  Identities=17%  Similarity=0.187  Sum_probs=191.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      ||||||    |||||||++|+++|.++||+|++++|..-                       +..|.+.+++++++.++|
T Consensus         2 MKIlIt----GasGfiG~~l~~~L~~~g~~Vi~~~r~~~-----------------------D~~d~~~~~~~l~~~~~d   54 (281)
T d1vl0a_           2 MKILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDL-----------------------DITNVLAVNKFFNEKKPN   54 (281)
T ss_dssp             EEEEEE----STTSHHHHHHHHHHTTSSEEEEEECTTTC-----------------------CTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEEEeechhc-----------------------cCCCHHHHHHHHHHcCCC
Confidence            789999    99999999999999999999999998641                       123788899999888899


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||+++.                |+....++.++++..+ .+++++|+..+|+.....+..|.++..+.    ..|+..
T Consensus        55 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~  133 (281)
T d1vl0a_          55 VVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEG  133 (281)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EEEeeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHH
Confidence            99999983                2345666666666655 47888899999999888888888876654    456778


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEE
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  294 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~  294 (349)
                      |+++++.+.+++++||+++||++.+  +...++..+..+++..+.+  ++.++++|++|+++++..++++...   ++||
T Consensus       134 e~~~~~~~~~~~i~R~~~vyG~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~---g~~~  206 (281)
T d1vl0a_         134 ENFVKALNPKYYIVRTAWLYGDGNN--FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY---GTFH  206 (281)
T ss_dssp             HHHHHHHCSSEEEEEECSEESSSSC--HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC---EEEE
T ss_pred             HHHHHHhCCCccccceeEEeCCCcc--cccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc---Ccee
Confidence            8899999999999999999999754  5667788888888877775  4778999999999999999988764   6999


Q ss_pred             eeCCCccCHHHHHHHHHHHhCCCceeEEcCCCccC----------CCccc---cCCCccce
Q 018900          295 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG----------IDAKK---AFPFRNMV  342 (349)
Q Consensus       295 i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~~----------~~~~k---~~g~~p~~  342 (349)
                      +++++.+|+.|+++.+++.+|.++++.+++...+.          ++.+|   .|||+|..
T Consensus       207 ~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~~  267 (281)
T d1vl0a_         207 CTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITRE  267 (281)
T ss_dssp             CCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCCB
T ss_pred             EeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCCC
Confidence            99999999999999999999999998877654432          23333   49999874

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.9e-30  Score=240.71  Aligned_cols=260  Identities=19%  Similarity=0.212  Sum_probs=185.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |.||||    ||+||||++|+++|+++||+|++++|-......    .......+...+++++.+|   .+++..++...
T Consensus         2 K~ILVT----GatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~----~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~   73 (347)
T d1z45a2           2 KIVLVT----GGAGYIGSHTVVELIENGYDCVVADNLSNSTYD----SVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY   73 (347)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTH----HHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCcCeEEEEECCCCcchh----HHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc
Confidence            459999    999999999999999999999999864322110    0001123345678888887   67788888877


Q ss_pred             CccEEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCC----CCCCCCCCCCCCC---
Q 018900          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPD---  208 (349)
Q Consensus       152 ~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~----~~~~~e~~~~~~~---  208 (349)
                      ++|+|||+|+.                |+.++.+++++|++.+++|||++||..|||...    ..+++|+.+..|.   
T Consensus        74 ~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y  153 (347)
T d1z45a2          74 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPY  153 (347)
T ss_dssp             CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHH
T ss_pred             CCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChh
Confidence            89999999983                678899999999999999999999999998643    3456666665542   


Q ss_pred             -CChHHHHHHHHhh------CCcEEEEecCceeeCCCCC-----------CchHHHHHHHH-hCCCcccCCCC------C
Q 018900          209 -AGHVQVEKYISEN------FSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIV-RKRPVPIPGSG------M  263 (349)
Q Consensus       209 -~~k~~~ek~~~~~------~~~~~ilR~~~v~g~~~~~-----------~~~~~~~~~~~-~~~~~~~~~~~------~  263 (349)
                       .+|..+|+++.++      +++++++|++++||+....           .++..++..+. .+.++.++|++      .
T Consensus       154 ~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~  233 (347)
T d1z45a2         154 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT  233 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred             HhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCc
Confidence             4567777766543      6899999999999975421           13333333333 24556666654      4


Q ss_pred             cceeeeeHHHHHHHHHHHhcCCC-----ccCCCEEEeeCCCccCHHHHHHHHHHHhCCCceeEEcCCCc-----cCCCcc
Q 018900          264 QFTNIAHVRDLSSMLTLAVENPE-----AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-----AGIDAK  333 (349)
Q Consensus       264 ~~~~~i~v~Dva~~~~~~~~~~~-----~~~~~~~~i~~~~~~t~~el~~~~~~~~g~~~~~~~~~~~~-----~~~~~~  333 (349)
                      +.++++++.|++.+++.+++...     ...+++||+++++++++.|+++.+.+.+|.+.++...+...     ...+..
T Consensus       234 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~s  313 (347)
T d1z45a2         234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPD  313 (347)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCH
T ss_pred             eeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHH
Confidence            46678888899999888876432     11247999999999999999999999999987776554332     223333


Q ss_pred             c---cCCCccce
Q 018900          334 K---AFPFRNMV  342 (349)
Q Consensus       334 k---~~g~~p~~  342 (349)
                      |   .|||+|..
T Consensus       314 k~~~~lGw~p~~  325 (347)
T d1z45a2         314 RAKRELKWQTEL  325 (347)
T ss_dssp             HHHHHTCCCCCC
T ss_pred             HHHHHHCCCCCC
Confidence            3   49999975

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.96  E-value=1.9e-29  Score=231.96  Aligned_cols=257  Identities=20%  Similarity=0.263  Sum_probs=186.7

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhhhcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      |||||    ||+||||++|+++|+++||+|++++|-......      .++.. ....+++++.+|   .+++.+++++.
T Consensus         2 KILVT----GatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~------~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~   71 (338)
T d1orra_           2 KLLIT----GGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT------DNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY   71 (338)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH------HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             EEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCCcccch------hHHHHhhccCCcEEEEcccCCHHHHHHHHHhc
Confidence            79999    999999999999999999999999863321110      00111 112467888888   57788889888


Q ss_pred             CccEEEeCCC----------------CChhhHHHHHHHHHhCCCcEEEEeccccc-cCCCCCCCCCCC------------
Q 018900          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEG------------  202 (349)
Q Consensus       152 ~~d~Vi~~a~----------------~~~~~~~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~~~~~e~------------  202 (349)
                      ++|+|||+|+                .|+.++.+|+++|++.+++++|+.||..+ |+.....+..+.            
T Consensus        72 ~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (338)
T d1orra_          72 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG  151 (338)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccC
Confidence            8999999998                36889999999999999887777776554 443322221111            


Q ss_pred             ----CCCCCC----CChHHHHHHH----HhhCCcEEEEecCceeeCCCCCC----chHHHHHHHHh-----CCCcccCCC
Q 018900          203 ----DVVKPD----AGHVQVEKYI----SENFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVR-----KRPVPIPGS  261 (349)
Q Consensus       203 ----~~~~~~----~~k~~~ek~~----~~~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~-----~~~~~~~~~  261 (349)
                          ....+.    ..|...|.++    ..++....++|+..+|++.....    .+..++..+.+     ++++.++|+
T Consensus       152 ~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  231 (338)
T d1orra_         152 YDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN  231 (338)
T ss_dssp             BCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESS
T ss_pred             cccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCC
Confidence                111111    1233344443    33489999999999998765443    45566666553     678899999


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC--CCccCHHHHHHHHHHHhCCCceeEEcCCCccC-----CCccc
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS--DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG-----IDAKK  334 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~--~~~~t~~el~~~~~~~~g~~~~~~~~~~~~~~-----~~~~k  334 (349)
                      |.+.++|+|++|++++++.++++.....+++|++..  ++.+++.|+++.+.+.+|.+.++..++.+..+     .+..|
T Consensus       232 g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  311 (338)
T d1orra_         232 GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKK  311 (338)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHH
T ss_pred             CceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHH
Confidence            999999999999999999999987665568999854  56789999999999999998888776654322     23333


Q ss_pred             ---cCCCccce
Q 018900          335 ---AFPFRNMV  342 (349)
Q Consensus       335 ---~~g~~p~~  342 (349)
                         .|||+|+.
T Consensus       312 ~~~~Lg~~p~~  322 (338)
T d1orra_         312 ITNAIDWSPKV  322 (338)
T ss_dssp             HHHHHCCCCCS
T ss_pred             HHHHHCCCcCC
Confidence               49999974

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=3e-29  Score=227.74  Aligned_cols=242  Identities=14%  Similarity=0.124  Sum_probs=182.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      +++|||||    |||||+|++|+++|+++||+|++++|+........   ......+...+++++.+|   .+.+.+.+.
T Consensus         2 ~k~KILVt----GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~---~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~   74 (312)
T d1qyda_           2 KKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK---VQMLLYFKQLGAKLIEASLDDHQRLVDALK   74 (312)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH---HHHHHHHHTTTCEEECCCSSCHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH---HHHHhhhccCCcEEEEeecccchhhhhhcc
Confidence            46789999    99999999999999999999999999764332100   011223445678888876   677778887


Q ss_pred             CCCccEEEeCCC-----CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCc
Q 018900          150 GVTFDVVLDNNG-----KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (349)
Q Consensus       150 ~~~~d~Vi~~a~-----~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~  224 (349)
                      +.  +.++++++     .+..++.+++++|++.+..++++.|+.+++......+...  ...+...+..++++..+.+++
T Consensus        75 ~~--~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  150 (312)
T d1qyda_          75 QV--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQP--GSITFIDKRKVRRAIEAASIP  150 (312)
T ss_dssp             TC--SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSS--TTHHHHHHHHHHHHHHHTTCC
T ss_pred             Cc--chhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccch--hhhhhHHHHHHHHhhcccccc
Confidence            75  89998876     4678899999999999988899999877765433222111  001112355577777888999


Q ss_pred             EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHH
Q 018900          225 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       225 ~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~  304 (349)
                      ++++|++.+||+..... ...+......++.+.+++++++.++|+|++|+|++++.+++++...++.+|++++++.+|++
T Consensus       151 ~~i~r~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~  229 (312)
T d1qyda_         151 YTYVSSNMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQK  229 (312)
T ss_dssp             BCEEECCEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHH
T ss_pred             eEEeccceeecCCccch-hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHH
Confidence            99999999999754321 11112223346677888999999999999999999999999987766445677777889999


Q ss_pred             HHHHHHHHHhCCCceeEEcCCC
Q 018900          305 GMAKLCAQAAGLPVEIVHYDPK  326 (349)
Q Consensus       305 el~~~~~~~~g~~~~~~~~~~~  326 (349)
                      |+++.+++++|.++++++++.+
T Consensus       230 e~~~~~~~~~g~~~~~~~i~~~  251 (312)
T d1qyda_         230 EVIQIWERLSEQNLDKIYISSQ  251 (312)
T ss_dssp             HHHHHHHHHHTCCCEECCBCSH
T ss_pred             HHHHHHHHHHCCCCeEEECCHH
Confidence            9999999999999998887754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.95  E-value=1.4e-28  Score=227.74  Aligned_cols=232  Identities=14%  Similarity=0.083  Sum_probs=164.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccc-ceecCCCeEEEcC---hhhHHhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN-EIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      +.+++||||    ||+||||++|+++|+++||+|++++|+......+...    +. .........+.+|   .+.+..+
T Consensus         9 ~~gk~VlVT----G~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~   80 (342)
T d1y1pa1           9 PEGSLVLVT----GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR----WDAKYPGRFETAVVEDMLKQGAYDEV   80 (342)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHSTTTEEEEECSCTTSTTTTTTT
T ss_pred             CCcCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh----hhccccccccEEEeccccchhhhhhh
Confidence            357899999    9999999999999999999999999976433221100    00 0001122334455   5677777


Q ss_pred             hcCCCccEEEeCCCC-------------ChhhHHHHHHHHHhC-CCcEEEEeccccccCCCC----CCCCCCCC------
Q 018900          148 VGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHVEGD------  203 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~-gv~~~i~~Ss~~vy~~~~----~~~~~e~~------  203 (349)
                      +.++  |+|+|+++.             |+.++.+++++|++. ++++|||+||.+++....    +....|..      
T Consensus        81 ~~~~--~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~  158 (342)
T d1y1pa1          81 IKGA--AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI  158 (342)
T ss_dssp             TTTC--SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred             cccc--hhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccc
Confidence            7765  999999984             678999999999886 699999999976543211    11222221      


Q ss_pred             ----------CCC----CCCChHHHHHHHHh----h--CCcEEEEecCceeeCCCCC----CchHHHHHHHHhCCCcccC
Q 018900          204 ----------VVK----PDAGHVQVEKYISE----N--FSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKRPVPIP  259 (349)
Q Consensus       204 ----------~~~----~~~~k~~~ek~~~~----~--~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~  259 (349)
                                +..    +..+|..+|+++.+    +  +++++++||+.+|||...+    .....++..+..++.....
T Consensus       159 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~  238 (342)
T d1y1pa1         159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             cccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc
Confidence                      111    12456666664433    3  4678899999999986433    2566677888887766544


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  316 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~  316 (349)
                      + +++.++|+|++|+|++++.+++++...  +.|++++++.++++|+++++.+.++.
T Consensus       239 ~-~~~~~~~v~v~Dva~~~i~~l~~~~~~--g~~~~~~~~~~t~~eia~~i~k~~p~  292 (342)
T d1y1pa1         239 A-LMPPQYYVSAVDIGLLHLGCLVLPQIE--RRRVYGTAGTFDWNTVLATFRKLYPS  292 (342)
T ss_dssp             H-TCCSEEEEEHHHHHHHHHHHHHCTTCC--SCEEEECCEEECHHHHHHHHHHHCTT
T ss_pred             C-CccceeeeeHHHHHHHHHHhhcCcccc--ceEEEEcCCceEHHHHHHHHHHHcCC
Confidence            3 445689999999999999999998763  45678888899999999999999853

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=1.8e-29  Score=227.86  Aligned_cols=241  Identities=17%  Similarity=0.198  Sum_probs=181.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++||||||    |||||+|++++++|+++||+|++++|+.........  ......+...+++++.+|   ...+.+.+.
T Consensus         2 ~kkKILVt----GatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (307)
T d1qyca_           2 SRSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK--AQLLESFKASGANIVHGSIDDHASLVEAVK   75 (307)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH--HHHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH--HHHHHhhccCCcEEEEeecccchhhhhhhh
Confidence            57899999    999999999999999999999999998654321100  011223445678888887   556666676


Q ss_pred             CCCccEEEeCCC-CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcEEEE
Q 018900          150 GVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF  228 (349)
Q Consensus       150 ~~~~d~Vi~~a~-~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~~il  228 (349)
                      +.  +.|+|+++ .+..++.+++++++..+++++++.|+.+.+.....  ..+.. ......+...++++.+.+++++++
T Consensus        76 ~~--~~vi~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~  150 (307)
T d1qyca_          76 NV--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH--AVEPA-KSVFEVKAKVRRAIEAEGIPYTYV  150 (307)
T ss_dssp             TC--SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCC--CCTTH-HHHHHHHHHHHHHHHHHTCCBEEE
T ss_pred             hc--eeeeecccccccchhhHHHHHHHHhccccceeeecccccccccc--ccccc-cccccccccccchhhccCCCceec
Confidence            65  99999887 46778899999999999999999998654332211  11100 001123456778888899999999


Q ss_pred             ecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHHHHHH
Q 018900          229 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK  308 (349)
Q Consensus       229 R~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~el~~  308 (349)
                      ||+++||+....  +..+.....++....+++.+++.++|+|++|+|++++.+++++...++.+|++++++.+|+.|+++
T Consensus       151 r~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~  228 (307)
T d1qyca_         151 SSNCFAGYFLRS--LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVA  228 (307)
T ss_dssp             ECCEEHHHHTTT--TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHH
T ss_pred             ccceecCCCccc--hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHH
Confidence            999999986542  222333445566777888899999999999999999999999877664567778889999999999


Q ss_pred             HHHHHhCCCceeEEcCCC
Q 018900          309 LCAQAAGLPVEIVHYDPK  326 (349)
Q Consensus       309 ~~~~~~g~~~~~~~~~~~  326 (349)
                      .+.+++|.++++..+|.+
T Consensus       229 ~~~~~~G~~~~~~~~~~~  246 (307)
T d1qyca_         229 LWEKKIDKTLEKAYVPEE  246 (307)
T ss_dssp             HHHHHTTSCCEEEEECHH
T ss_pred             HHHHHHCCCCcEEECCHH
Confidence            999999999998887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3e-27  Score=203.02  Aligned_cols=190  Identities=18%  Similarity=0.193  Sum_probs=148.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .|+||+||    ||||++|++++++|+++||+|++++|++++...           ....+++++.+|   .+++.++++
T Consensus         2 ~~kkIlV~----GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~~gD~~d~~~l~~al~   66 (205)
T d1hdoa_           2 AVKKIAIF----GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----------EGPRPAHVVVGDVLQAADVDKTVA   66 (205)
T ss_dssp             CCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----------SSCCCSEEEESCTTSHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-----------ccccccccccccccchhhHHHHhc
Confidence            57899999    999999999999999999999999998765432           223578888888   677888888


Q ss_pred             CCCccEEEeCCCC---------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHh
Q 018900          150 GVTFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (349)
Q Consensus       150 ~~~~d~Vi~~a~~---------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~  220 (349)
                      +.  |+|||+++.         +..+++++++++++.|++|||++||.++|+.....+...   ......|..+|+++++
T Consensus        67 ~~--d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~---~~~~~~~~~~e~~l~~  141 (205)
T d1hdoa_          67 GQ--DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL---QAVTDDHIRMHKVLRE  141 (205)
T ss_dssp             TC--SEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGG---HHHHHHHHHHHHHHHH
T ss_pred             CC--CEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccc---cccchHHHHHHHHHHh
Confidence            76  999999873         356799999999999999999999999887654322110   0111346678999999


Q ss_pred             hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          221 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       221 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                      .+++|+++||+.+++....              +...+..++.....+|+++|+|++++.++++++..+ +.+.+..
T Consensus       142 ~~~~~tiirp~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g-~~~~~s~  203 (205)
T d1hdoa_         142 SGLKYVAVMPPHIGDQPLT--------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG-HSTYPSH  203 (205)
T ss_dssp             TCSEEEEECCSEEECCCCC--------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTT-CEEEEEC
T ss_pred             cCCceEEEecceecCCCCc--------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCC-EEEecCC
Confidence            9999999999999874332              222334455666789999999999999999987544 7777654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.94  E-value=4.3e-26  Score=211.30  Aligned_cols=260  Identities=15%  Similarity=0.097  Sum_probs=181.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++||||||    ||+||||++|+++|+++||+|++++|...+...+...      .-..++++++.+|   ++.+.++++
T Consensus         7 ~~KkILVT----G~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~------~~~~~~i~~~~~Dl~d~~~l~~~~~   76 (356)
T d1rkxa_           7 QGKRVFVT----GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET------ARVADGMQSEIGDIRDQNKLLESIR   76 (356)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH------TTTTTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhh------hhcccCCeEEEeeccChHhhhhhhh
Confidence            57999999    9999999999999999999999999987654321100      0012468888887   567778888


Q ss_pred             CCCccEEEeCCCC----------------ChhhHHHHHHHHHhCCC-cEEEEeccccccCCC-CCCCCCCCCCCCCC---
Q 018900          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPA-DEPPHVEGDVVKPD---  208 (349)
Q Consensus       150 ~~~~d~Vi~~a~~----------------~~~~~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~-~~~~~~e~~~~~~~---  208 (349)
                      ...+|+|+|+++.                |+.++.++++++++.+. ..+++.|+..+|... ...+..|+.+..|.   
T Consensus        77 ~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y  156 (356)
T d1rkxa_          77 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPY  156 (356)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHH
T ss_pred             hchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCcc
Confidence            8789999999983                67789999999988764 455555555555443 33445555544432   


Q ss_pred             -CChHHHHHHHH-------------hhCCcEEEEecCceeeCCCCC--CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          209 -AGHVQVEKYIS-------------ENFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       209 -~~k~~~ek~~~-------------~~~~~~~ilR~~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                       ..|...|..+.             ..++.++++||+++|||+...  .++..++..+..+.+ .+++.+.+.++++|++
T Consensus       157 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~  235 (356)
T d1rkxa_         157 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVL  235 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETH
T ss_pred             ccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeeccccccccccc
Confidence             22333343332             236789999999999998633  255556666554444 5677888999999999


Q ss_pred             HHHHHHHHHhcCCCccC---CCEEEe--eCCCccCHHHHHHHHHHHhCCCceeEEcC------CCccCCCccc---cCCC
Q 018900          273 DLSSMLTLAVENPEAAS---SNIFNL--VSDRAVTLDGMAKLCAQAAGLPVEIVHYD------PKAAGIDAKK---AFPF  338 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~---~~~~~i--~~~~~~t~~el~~~~~~~~g~~~~~~~~~------~~~~~~~~~k---~~g~  338 (349)
                      |++.++..+++++...+   +...+.  ..++.++..++++.+.+.+|.+.++....      .+....+..|   .|||
T Consensus       236 D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw  315 (356)
T d1rkxa_         236 EPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGW  315 (356)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCC
T ss_pred             cccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCC
Confidence            99999999988754321   133333  34567899999999999999877665432      1122334333   4999


Q ss_pred             cccee
Q 018900          339 RNMVF  343 (349)
Q Consensus       339 ~p~~~  343 (349)
                      +|++-
T Consensus       316 ~P~~~  320 (356)
T d1rkxa_         316 HPRWN  320 (356)
T ss_dssp             CCCCC
T ss_pred             CcCCC
Confidence            99864

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.7e-25  Score=195.72  Aligned_cols=193  Identities=23%  Similarity=0.249  Sum_probs=145.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh---hHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA---EVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~---~l~~  146 (349)
                      +++++||||    |||||+|++|+++|+++|+  +|++++|++....           ......++.+.+|.+   ++.+
T Consensus        12 m~~k~IlIt----GaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~-----------~~~~~~i~~~~~D~~~~~~~~~   76 (232)
T d2bkaa1          12 MQNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-----------EEAYKNVNQEVVDFEKLDDYAS   76 (232)
T ss_dssp             HTCCEEEEE----CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-----------SGGGGGCEEEECCGGGGGGGGG
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc-----------ccccceeeeeeecccccccccc
Confidence            356789999    9999999999999999984  8999999764332           112245677777854   4555


Q ss_pred             hhcCCCccEEEeCCCC-------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHH
Q 018900          147 VVGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~-------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~  213 (349)
                      .+.+  +|+|+|+++.             |+.++.+++++|++.++++||++|+.++++....         .+..+|+.
T Consensus        77 ~~~~--~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~---------~Y~~~K~~  145 (232)
T d2bkaa1          77 AFQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF---------LYLQVKGE  145 (232)
T ss_dssp             GGSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS---------HHHHHHHH
T ss_pred             cccc--cccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccc---------hhHHHHHH
Confidence            5555  5999999983             4678999999999999999999999887654331         13347899


Q ss_pred             HHHHHHhhCCc-EEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCE
Q 018900          214 VEKYISENFSN-WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  292 (349)
Q Consensus       214 ~ek~~~~~~~~-~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~  292 (349)
                      +|+++.+.+++ ++|+||+.+||++.......++.......-+     ........||++|+|++++.++.++..  +++
T Consensus       146 ~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~I~~~dvA~a~i~~~~~~~~--~~~  218 (232)
T d2bkaa1         146 VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAMLNNVVRPRD--KQM  218 (232)
T ss_dssp             HHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCC-----TTGGGGTEEEHHHHHHHHHHHHTSCCC--SSE
T ss_pred             hhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccC-----CcccCCCeEEHHHHHHHHHHHHhcCcc--CCe
Confidence            99999999875 9999999999997665544444444443322     222334579999999999999988765  356


Q ss_pred             EEeeC
Q 018900          293 FNLVS  297 (349)
Q Consensus       293 ~~i~~  297 (349)
                      +.+.+
T Consensus       219 ~i~~~  223 (232)
T d2bkaa1         219 ELLEN  223 (232)
T ss_dssp             EEEEH
T ss_pred             EEEcH
Confidence            76664

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=3.1e-25  Score=200.44  Aligned_cols=249  Identities=17%  Similarity=0.218  Sum_probs=153.0

Q ss_pred             EEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh-hhHHhhhcC---C
Q 018900           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AEVGNVVGG---V  151 (349)
Q Consensus        77 VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-~~l~~~~~~---~  151 (349)
                      ||||    ||+||||++|+++|+++|+ +|+++++-.....         ...+....+. ...|. +.....+..   .
T Consensus         2 ILIT----GgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK---------FVNLVDLNIA-DYMDKEDFLIQIMAGEEFG   67 (307)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG---------GHHHHTSCCS-EEEEHHHHHHHHHTTCCCS
T ss_pred             EEEe----cCccHHHHHHHHHHHhCCCCeEEEEECCCCcch---------hhcccccchh-hhccchHHHHHHhhhhccc
Confidence            8999    9999999999999999995 7999875332211         1111111111 12232 223333321   2


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHH
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQ  213 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~  213 (349)
                      .+++|+|+|+.              ++.++.+++++++..+++ +++.||..+|.........++.+..+.    .+|..
T Consensus        68 ~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~  146 (307)
T d1eq2a_          68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFL  146 (307)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHH
T ss_pred             chhhhhhhccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccch
Confidence            36899999872              467899999999998885 666666666665554444444433332    34555


Q ss_pred             HHHHHHh----hCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcc-cCCCCCcceeeeeHHHHHHHHHHHhc
Q 018900          214 VEKYISE----NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVP-IPGSGMQFTNIAHVRDLSSMLTLAVE  283 (349)
Q Consensus       214 ~ek~~~~----~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~~~  283 (349)
                      .|+++.+    ++++++++|++++|||+....     +...++..+..++... ..|++.+.++|+|++|+++++..+++
T Consensus       147 ~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~  226 (307)
T d1eq2a_         147 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE  226 (307)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHH
T ss_pred             hhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhh
Confidence            6665554    389999999999999976533     4455666777666554 45778888999999999999999998


Q ss_pred             CCCccCCCEEEeeCCCccCHHHHHHHHHHHhCC-CceeEEcCCCc-------cCCCc---cccCCCcccee
Q 018900          284 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKA-------AGIDA---KKAFPFRNMVF  343 (349)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~t~~el~~~~~~~~g~-~~~~~~~~~~~-------~~~~~---~k~~g~~p~~~  343 (349)
                      ++..   ++||+++++.++++|+++++.+..+. ++++.+.+...       ...+.   ++.+||+|+.-
T Consensus       227 ~~~~---~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~s  294 (307)
T d1eq2a_         227 NGVS---GIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKT  294 (307)
T ss_dssp             HCCC---EEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCC
T ss_pred             hccc---cccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCC
Confidence            7653   69999999999999999999887763 34433332211       11232   33489999753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.92  E-value=2.1e-24  Score=194.27  Aligned_cols=211  Identities=18%  Similarity=0.279  Sum_probs=162.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      ||||||    ||+||||++|+++|.++|+.| ++++.....                   ..+..|.+.+++++++.++|
T Consensus         1 MKILIt----G~tGfiG~~l~~~L~~~g~~v-~~~~~~~~~-------------------~~Dl~~~~~~~~~i~~~~~D   56 (298)
T d1n2sa_           1 MNILLF----GKTGQVGWELQRSLAPVGNLI-ALDVHSKEF-------------------CGDFSNPKGVAETVRKLRPD   56 (298)
T ss_dssp             CEEEEE----CTTSHHHHHHHHHTTTTSEEE-EECTTCSSS-------------------CCCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEE-EEECCCccc-------------------cCcCCCHHHHHHHHHHcCCC
Confidence            679999    999999999999999998754 555543211                   11123788899999888899


Q ss_pred             EEEeCCCC----------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCC----CChHHH
Q 018900          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQV  214 (349)
Q Consensus       155 ~Vi~~a~~----------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~----~~k~~~  214 (349)
                      +|||+|+.                |+.++.++++++++.++ +++++||..+|+.....|+.|+.+..|.    ..|+.+
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~  135 (298)
T d1n2sa_          57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAG  135 (298)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHH
T ss_pred             EEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhh
Confidence            99999983                46778999999998885 7999999999998888899998887664    356677


Q ss_pred             HHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCC---CccCCC
Q 018900          215 EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP---EAASSN  291 (349)
Q Consensus       215 ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~  291 (349)
                      |+++.++.....++|++..++.... .....+...+..+.++...+  ++..+++|+.|+++++..++...   ... ++
T Consensus       136 e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~~~~~-~~  211 (298)
T d1n2sa_         136 EKALQDNCPKHLIFRTSWVYAGKGN-NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEV-AG  211 (298)
T ss_dssp             HHHHHHHCSSEEEEEECSEECSSSC-CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGG-CE
T ss_pred             hhhHHhhhcccccccccceeeccCC-ccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhccccc-cc
Confidence            8888888888888888877755433 23444555566666665554  45678999999999998887632   222 47


Q ss_pred             EEEeeCCCccCHHHHHHHHHHHh
Q 018900          292 IFNLVSDRAVTLDGMAKLCAQAA  314 (349)
Q Consensus       292 ~~~i~~~~~~t~~el~~~~~~~~  314 (349)
                      +||+++++.++..|+++++.+..
T Consensus       212 ~~n~~~~~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         212 LYHLVAGGTTTWHDYAALVFDEA  234 (298)
T ss_dssp             EEECCCBSCEEHHHHHHHHHHHH
T ss_pred             cccccCCCceecHHHHHHHHhhh
Confidence            99999999999999999998875

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=1.4e-24  Score=200.92  Aligned_cols=236  Identities=14%  Similarity=0.038  Sum_probs=171.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcCh----hhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGDP----AEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D~----~~l~~~  147 (349)
                      ++|+||||    |||||||++|+++|+++||+|++++|+..+...         .. ...++++++.+|.    +.++.+
T Consensus         2 ~kktIlVt----GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~---------~~~~~~~~v~~~~gD~~d~~~~~~~a   68 (350)
T d1xgka_           2 QKKTIAVV----GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA---------EELQAIPNVTLFQGPLLNNVPLMDTL   68 (350)
T ss_dssp             CCCCEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH---------HHHHTSTTEEEEESCCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHhCCCeEEEEECCcchhhh---------hhhcccCCCEEEEeeCCCcHHHHHHH
Confidence            47899999    999999999999999999999999998754421         11 1234788888883    346677


Q ss_pred             hcCCCccEEEeCCC----CChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCC
Q 018900          148 VGGVTFDVVLDNNG----KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS  223 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~----~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~  223 (349)
                      +.+.  |++++...    .++..+++++++|+++|+++++++||.+........     ........|...+.++.+.++
T Consensus        69 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~-----~~~~~~~~k~~~~~~~~~~~~  141 (350)
T d1xgka_          69 FEGA--HLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW-----PAVPMWAPKFTVENYVRQLGL  141 (350)
T ss_dssp             HTTC--SEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC-----CCCTTTHHHHHHHHHHHTSSS
T ss_pred             hcCC--ceEEeecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc-----cchhhhhhHHHHHHHHHhhcc
Confidence            7775  77766543    457789999999999999899989886644332211     111222467888999999999


Q ss_pred             cEEEEecCceeeCCCCCCchHHHHHHHHhCC-CcccCCCCCcceeeeeH-HHHHHHHHHHhcCC-CccCCCEEEeeCCCc
Q 018900          224 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHV-RDLSSMLTLAVENP-EAASSNIFNLVSDRA  300 (349)
Q Consensus       224 ~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v-~Dva~~~~~~~~~~-~~~~~~~~~i~~~~~  300 (349)
                      +++++|++.+++.................+. ....+.+++..+.++++ +|+++++..+++++ +...|++|+++++ .
T Consensus       142 ~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~-~  220 (350)
T d1xgka_         142 PSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-T  220 (350)
T ss_dssp             CEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE-E
T ss_pred             CceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCC-c
Confidence            9999999998875432210000000011111 12445567777888876 79999999999765 3345689999875 6


Q ss_pred             cCHHHHHHHHHHHhCCCceeEEcCCCccC
Q 018900          301 VTLDGMAKLCAQAAGLPVEIVHYDPKAAG  329 (349)
Q Consensus       301 ~t~~el~~~~~~~~g~~~~~~~~~~~~~~  329 (349)
                      +|+.|+++.+++++|++++++++|.....
T Consensus       221 ~T~~eia~~l~~~~G~~v~~~~vp~~~~~  249 (350)
T d1xgka_         221 LSPVQVCAAFSRALNRRVTYVQVPKVEIK  249 (350)
T ss_dssp             ECHHHHHHHHHHHHTSCEEEEECSSCCCC
T ss_pred             CCHHHHHHHHHHHHCCcceEEECCHHHHH
Confidence            99999999999999999999999876653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=8.7e-25  Score=190.53  Aligned_cols=212  Identities=16%  Similarity=0.181  Sum_probs=150.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCe--EEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE--VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~--V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      .|++||||    |||||||++++++|+++||+  |+.++|++++...+            ..+++++.+|   .+++.++
T Consensus         2 ~~~tVlVt----GatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~   65 (252)
T d2q46a1           2 NLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPA   65 (252)
T ss_dssp             SCCEEEEE----STTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc------------cCCcEEEEeeeccccccccc
Confidence            57899999    99999999999999999975  66677766433221            2356777777   6777778


Q ss_pred             hcCCCccEEEeCCCC-----------------------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGVTFDVVLDNNGK-----------------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~-----------------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++++  |+|||+++.                             |+.+++++++.++..+.+++.+.|+...+...... 
T Consensus        66 ~~~~--d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-  142 (252)
T d2q46a1          66 FQGI--DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL-  142 (252)
T ss_dssp             HTTC--SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG-
T ss_pred             cccc--eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccc-
Confidence            8775  999999872                             35689999999999999999999987766543211 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                       ...........+...+.+..+.+++++++||+++||+.....       ....+.....   .....++||++|+|+++
T Consensus       143 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~---~~~~~~~i~~~Dva~a~  211 (252)
T d2q46a1         143 -NKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-------ELLVGKDDEL---LQTDTKTVPRADVAEVC  211 (252)
T ss_dssp             -GGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSS-------CEEEESTTGG---GGSSCCEEEHHHHHHHH
T ss_pred             -ccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchh-------hhhhccCccc---ccCCCCeEEHHHHHHHH
Confidence             111111111234455666777899999999999999975431       0111111111   12235699999999999


Q ss_pred             HHHhcCCCccCCCEEEeeCCC---ccCHHHHHHHHHHHhC
Q 018900          279 TLAVENPEAASSNIFNLVSDR---AVTLDGMAKLCAQAAG  315 (349)
Q Consensus       279 ~~~~~~~~~~~~~~~~i~~~~---~~t~~el~~~~~~~~g  315 (349)
                      +.+++++...+ ++||++++.   ..+++|+.+++.++.+
T Consensus       212 ~~~l~~~~~~g-~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         212 IQALLFEEAKN-KAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HHHTTCGGGTT-EEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HHHhCCccccC-cEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            99999987654 899999743   4567788777766544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=9.3e-24  Score=181.74  Aligned_cols=183  Identities=17%  Similarity=0.139  Sum_probs=129.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      .||||||    |||||+|++|+++|+++|+  +|++++|++...               .+.++....|..++...+.. 
T Consensus         2 ~KkIlIt----GatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------------~~~~~~~~~d~~~~~~~~~~-   61 (212)
T d2a35a1           2 PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRLDNPVGPLAELLPQLDG-   61 (212)
T ss_dssp             CCEEEEE----CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTEECCBSCHHHHGGGCCS-
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------------cccccccccchhhhhhcccc-
Confidence            5899999    9999999999999999998  677777654211               11233334465555444433 


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~  217 (349)
                      .+|+|||++|.              ++.++.+++++|++.++++|+++|+.++++....         .+..+|+.+|++
T Consensus        62 ~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~---------~y~~~K~~~E~~  132 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI---------FYNRVKGELEQA  132 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS---------HHHHHHHHHHHH
T ss_pred             chheeeeeeeeeccccccccccccchhhhhhhccccccccccccccccccccccccccc---------chhHHHHHHhhh
Confidence            37999999883              4677899999999999999999999988765331         123478889999


Q ss_pred             HHhhCC-cEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEee
Q 018900          218 ISENFS-NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  296 (349)
Q Consensus       218 ~~~~~~-~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~  296 (349)
                      +++.+. +++|+||+.+||+.....+...+      ..++.....  ..+.+||++|+|++++.+++++..   +++++.
T Consensus       133 l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~------~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~~---g~~~~~  201 (212)
T d2a35a1         133 LQEQGWPQLTIARPSLLFGPREEFRLAEIL------AAPIARILP--GKYHGIEACDLARALWRLALEEGK---GVRFVE  201 (212)
T ss_dssp             HTTSCCSEEEEEECCSEESTTSCEEGGGGT------TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS---EEEEEE
T ss_pred             ccccccccceeeCCcceeCCcccccHHHHH------HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCCC---CCEEEE
Confidence            998887 49999999999997654321111      111111111  224569999999999999988765   344444

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.52  E-value=5.8e-14  Score=122.25  Aligned_cols=196  Identities=14%  Similarity=0.156  Sum_probs=132.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++++|+.+..++..+          ..+.+.+.+|   +++++++++
T Consensus         4 ~gK~~lIT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~   69 (242)
T d1ulsa_           4 KDKAVLIT----GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFA   69 (242)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765443221          1134556666   566666554


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+..+++.+||.+..+....    
T Consensus        70 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~----  145 (242)
T d1ulsa_          70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQ----  145 (242)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTC----
T ss_pred             HHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCC----
Confidence            33     48999999993                    2333    455566667667778888888654332211    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                          ..|..+|.+++.+.+       .+|+++..+.||.+-.+.... ....+.+.+....|+..         +...+|
T Consensus       146 ----~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~R---------~~~ped  211 (242)
T d1ulsa_         146 ----ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLGR---------AGKPLE  211 (242)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTCS---------CBCHHH
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCCC---------CCCHHH
Confidence                123345555444332       348999999999997665432 33444555555554422         346789


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +|++++.++.+... .+|+++.+.+|..
T Consensus       212 ia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         212 VAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            99999999876544 4679999998853

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.49  E-value=2.9e-13  Score=117.18  Aligned_cols=193  Identities=17%  Similarity=0.206  Sum_probs=127.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh-hhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP-AEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~-~~l~~~~~~~  151 (349)
                      ++|+||||    ||++.||+.++++|+++|++|++.+|+++..++              .+.+++.+|. ++++.+++..
T Consensus         3 kgK~~lVT----Gas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------------~~~~~~~~Dv~~~~~~~~~~~   64 (234)
T d1o5ia_           3 RDKGVLVL----AASRGIGRAVADVLSQEGAEVTICARNEELLKR--------------SGHRYVVCDLRKDLDLLFEKV   64 (234)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------------TCSEEEECCTTTCHHHHHHHS
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------------cCCcEEEcchHHHHHHHHHHh
Confidence            57899999    999999999999999999999999998754432              2445666773 3345555544


Q ss_pred             C-ccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCC
Q 018900          152 T-FDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (349)
Q Consensus       152 ~-~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~  206 (349)
                      + +|++||+||.                    |+.    .++.++..+++.+..++|+++|.........       ...
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~-------~~~  137 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN-------LYT  137 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------BHH
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc-------ccc
Confidence            3 8999999983                    222    3556666677777779999999765432211       111


Q ss_pred             CCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          207 PDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       207 ~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                      +..+|.+++.+.       ..+|+++..|.||.+-.+......-....+.+....|+.         .+...+|+|++++
T Consensus       138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~  208 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR---------RMAKPEEIASVVA  208 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS---------SCBCHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC---------CCcCHHHHHHHHH
Confidence            223455544322       234899999999988665422111122233333333321         2457899999999


Q ss_pred             HHhcCCCc-cCCCEEEeeCCC
Q 018900          280 LAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       280 ~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .++.+... .+|+++.+.+|-
T Consensus       209 fL~S~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         209 FLCSEKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhChhhcCCcCcEEEECccc
Confidence            99876543 467999998874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.48  E-value=2.9e-13  Score=117.32  Aligned_cols=193  Identities=17%  Similarity=0.237  Sum_probs=124.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC-
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~-  151 (349)
                      ++|+||||    ||++.||+.++++|+++|++|++++|+.+..++..             .++++..|+++++++++.. 
T Consensus         6 ~gK~~lIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------------~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           6 VSRSVLVT----GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------------EEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-------------EEEEecCCHHHHHHHHHHHH
Confidence            68999999    99999999999999999999999999876553210             1223333456655554433 


Q ss_pred             ----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCC
Q 018900          152 ----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       152 ----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                          ++|++||+||.                    |+.+    ++.++..+++.+..++|++||...+....       .
T Consensus        69 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-------~  141 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-------N  141 (237)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------C
T ss_pred             HhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc-------c
Confidence                48999999993                    2333    55666777888888999999965432211       1


Q ss_pred             CCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHH
Q 018900          204 VVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  276 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  276 (349)
                      ...|..+|.+++.+.       ..+|+++..|.||.+..+.... +.....+.+.+..|+         .-+...+|+|+
T Consensus       142 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl---------~R~~~pedvA~  211 (237)
T d1uzma1         142 QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFIPA---------KRVGTPAEVAG  211 (237)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGCTT---------CSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            112234555544433       2348999999999986432110 111222233332222         12457899999


Q ss_pred             HHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          277 MLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       277 ~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +++.++.+... .+|+++.+.+|-
T Consensus       212 ~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         212 VVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhcCCcCCeEEECCCC
Confidence            99999876543 467999998873

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.5e-13  Score=118.28  Aligned_cols=198  Identities=15%  Similarity=0.168  Sum_probs=128.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||++.||++++++|+++|++|++++|+.+..+++..       ++  .++..+.+|   .++++++++
T Consensus         6 ~GK~~lIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~-------~~--~~~~~~~~Dv~d~~~v~~~~~   72 (244)
T d1pr9a_           6 AGRRVLVT----GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR-------EC--PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH-------hc--CCCeEEEEeCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998765543221       11  234455555   788888888


Q ss_pred             CCC-ccEEEeCCCC--------------------Chhh----HHHHHHH-HHhCCCcEEEEeccccccCCCCCCCCCCCC
Q 018900          150 GVT-FDVVLDNNGK--------------------NLDA----VRPVADW-AKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       150 ~~~-~d~Vi~~a~~--------------------~~~~----~~~ll~~-a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      ..+ +|++||+|+.                    |+.+    ++.++.. +++.+..++|++||...+.....       
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~-------  145 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN-------  145 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc-------
Confidence            775 9999999993                    2333    4444543 33445679999999765332211       


Q ss_pred             CCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          204 VVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ...|..+|.+++.+.       ...|+++..|.||.+..+...... -....+.+....|+         ..+...+|+|
T Consensus       146 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA  216 (244)
T d1pr9a_         146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHVV  216 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            111223455544332       234899999999988654221110 11223333333332         1246789999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++++.++.+... .+|+++.+.+|-
T Consensus       217 ~~v~fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         217 NAILFLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCcCCcEEEECccH
Confidence            999998876543 467899998873

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.44  E-value=1e-13  Score=121.32  Aligned_cols=204  Identities=16%  Similarity=0.173  Sum_probs=129.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|.+.+|+.+...+....    +.+.....+..+.+|   +++++++++
T Consensus         4 ~gK~~lIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----l~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (251)
T d1vl8a_           4 RGRVALVT----GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK----LTEKYGVETMAFRCDVSNYEEVKKLLE   75 (251)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHHhCCcEEEEEccCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987554322110    001111234456666   555555554


Q ss_pred             CC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.    .++.++..+++.+-.++|+++|........     
T Consensus        76 ~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~-----  150 (251)
T d1vl8a_          76 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-----  150 (251)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC-----
Confidence            32     48999999993                    233    355666677777777999999854311110     


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                       .....|..+|.+++.+.       ..+|+++..|.||.+-.+...... -....+.+.+..|+.-         +...+
T Consensus       151 -~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~~pe  220 (251)
T d1vl8a_         151 -PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR---------TGVPE  220 (251)
T ss_dssp             -SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS---------CBCGG
T ss_pred             -ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCC---------CCCHH
Confidence             01111223455544333       234899999999998665432110 0123344444444322         34678


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.+... .+|+++.+.+|.
T Consensus       221 dvA~~v~fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         221 DLKGVAVFLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence            999999998876543 467999998874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.4e-13  Score=118.23  Aligned_cols=198  Identities=18%  Similarity=0.188  Sum_probs=127.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++++|+.+...++..       ++  .++..+.+|   +++++++++
T Consensus         4 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-------~~--~~~~~~~~Dv~~~~~v~~~~~   70 (242)
T d1cyda_           4 SGLRALVT----GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-------EC--PGIEPVCVDLGDWDATEKALG   70 (242)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HS--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------hc--CCCeEEEEeCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998755433211       11  245555555   788888888


Q ss_pred             CCC-ccEEEeCCCC--------------------ChhhHHHHHH----HH-HhCCCcEEEEeccccccCCCCCCCCCCCC
Q 018900          150 GVT-FDVVLDNNGK--------------------NLDAVRPVAD----WA-KSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (349)
Q Consensus       150 ~~~-~d~Vi~~a~~--------------------~~~~~~~ll~----~a-~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~  203 (349)
                      ..+ +|++||+||.                    |+.+...+.+    .+ ++.+-.++|++||...+.....       
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------  143 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-------  143 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-------
Confidence            775 9999999993                    3344444443    32 2334468999999764432211       


Q ss_pred             CCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          204 VVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       204 ~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                      ...|..+|.+++.+.+       .+|+++..+.||.+..+..... --..+.+.+....|+.         .+...+|+|
T Consensus       144 ~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peeva  214 (242)
T d1cyda_         144 LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR---------KFAEVEDVV  214 (242)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS---------SCBCHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCC---------CCcCHHHHH
Confidence            1112334555444332       3489999999998854321100 0012233333333321         245789999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ++++.++.+... .+|+++.+.+|-
T Consensus       215 ~~v~fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         215 NSILFLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             HHHHHHhCchhcCcCCceEEeCcch
Confidence            999998876543 467999998873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=2.8e-13  Score=117.86  Aligned_cols=198  Identities=15%  Similarity=0.185  Sum_probs=128.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|.+|||    ||++.||+.+++.|+++|++|++.+|+++..+++.+       ++ ..+...+.+|   +++++++++
T Consensus         3 ~gK~alIT----Gas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~-------~~-~~~~~~~~~Dv~~~~~v~~~~~   70 (243)
T d1q7ba_           3 EGKIALVT----GASRGIGRAIAETLAARGAKVIGTATSENGAQAISD-------YL-GANGKGLMLNVTDPASIESVLE   70 (243)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-------HH-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------Hh-CCCCcEEEEEecCHHHhhhhhh
Confidence            57899999    999999999999999999999999998765543221       11 2234555666   555555544


Q ss_pred             C----C-CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 G----V-TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~----~-~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      .    . ++|++||+|+.                    |+.    .++.++..+++.+-.++|++||...+.....    
T Consensus        71 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~----  146 (243)
T d1q7ba_          71 KIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG----  146 (243)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             hhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC----
Confidence            2    2 48999999993                    233    3555666667767789999999764332111    


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.+       .+|+++..+.||.+-.+.... ........+....|+         ..+...+|
T Consensus       147 ---~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl---------~R~~~ped  213 (243)
T d1q7ba_         147 ---QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-LSDDQRAGILAQVPA---------GRLGGAQE  213 (243)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTCTT---------SSCBCHHH
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh-hhhhHHHHHHhcCCC---------CCCCCHHH
Confidence               1112345555444332       348999999999885432111 112223333333332         12457899


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++++.++.+... .+|+++++.+|.
T Consensus       214 vA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         214 IANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            99999999976543 467999998874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.43  E-value=3.6e-13  Score=117.75  Aligned_cols=198  Identities=18%  Similarity=0.252  Sum_probs=129.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++|.+|||    ||++.||++++++|+++|++|++.+|+.+..++..       .++..  ..+..+.+|   +++++++
T Consensus         9 enKvalIT----Gas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~-------~~l~~~g~~~~~~~~Dvt~~~~v~~~   77 (251)
T d2c07a1           9 ENKVALVT----GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVV-------DEIKSFGYESSGYAGDVSKKEEISEV   77 (251)
T ss_dssp             SSCEEEEE----STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH-------HHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            57899999    99999999999999999999999999875544321       11211  134455666   5666655


Q ss_pred             hcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      ++..     ++|++||+++.                    |+.+    ++.++..+++.+-.++|++||...+.....  
T Consensus        78 ~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~--  155 (251)
T d2c07a1          78 INKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG--  155 (251)
T ss_dssp             HHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--
T ss_pred             HHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC--
Confidence            5432     48999999993                    2333    455566667777789999999654322111  


Q ss_pred             CCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                           ...|..+|.+++.+.       ..+|+++..|.||.+-.+.... ....+.+.+....|+.         -+...
T Consensus       156 -----~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~p  220 (251)
T d2c07a1         156 -----QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIPAG---------RMGTP  220 (251)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCTTS---------SCBCH
T ss_pred             -----CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCCCC---------CCcCH
Confidence                 111233555544433       3348999999999987664332 2333444454444332         24578


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +|+|++++.++.+... .+|+++.+.+|
T Consensus       221 edvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         221 EEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            9999999999876543 46789999887

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.42  E-value=2.2e-13  Score=119.47  Aligned_cols=200  Identities=15%  Similarity=0.203  Sum_probs=130.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..       .++..  ..+..+.+|   +++++++
T Consensus        10 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------~~l~~~g~~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_          10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVV-------DEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHHcCCcEEEEEccCCCHHHHHHH
Confidence            47899999    99999999999999999999999999875544321       12222  234556666   5555555


Q ss_pred             hcCC-----CccEEEeCCCC-------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~-------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ++..     ++|++||+||.                   |+.+    ++.++..+++.+-.++|++||...+.....   
T Consensus        79 ~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~---  155 (255)
T d1fmca_          79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN---  155 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT---
T ss_pred             HHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc---
Confidence            4432     48999999993                   2333    445555666667778999999664332211   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                          ...|..+|.+++.+.+       .+|+++..|.||.+..+......-....+.+.+..|+.         -+...+
T Consensus       156 ----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pe  222 (255)
T d1fmca_         156 ----MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQ  222 (255)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHH
T ss_pred             ----cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHH
Confidence                1122234555433332       34899999999998654322222233444555544432         235679


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.+... .+|+++.+.+|.
T Consensus       223 dvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         223 DIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            999999999876543 467999999885

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.42  E-value=1.4e-12  Score=114.00  Aligned_cols=197  Identities=16%  Similarity=0.143  Sum_probs=125.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+...+..+       ++ ...+..+.+|   +++++++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~v~~~~~   71 (254)
T d1hdca_           4 SGKTVIIT----GGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR-------EL-GDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------TT-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------Hh-CCceEEEEcccCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998765543221       11 2245566666   566665554


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||...+.....    
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~----  147 (254)
T d1hdca_          72 YAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc----
Confidence            32     48999999993                    2333    445555666667789999999764332111    


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce-ee-eeH
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT-NI-AHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-i~v  271 (349)
                         ...|..+|.+++.+.       ..+|+++..|.||.+..+         +.........-....  .... .+ ...
T Consensus       148 ---~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~---------~~~~~~~~~~~~~~~--~~pl~R~g~~P  213 (254)
T d1hdca_         148 ---TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP---------MTAETGIRQGEGNYP--NTPMGRVGNEP  213 (254)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH---------HHHHHTCCCSTTSCT--TSTTSSCB-CH
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc---------cchhcCHHHHHHHHh--CCCCCCCCCCH
Confidence               112233455544332       234899999999988543         122222111111110  0111 12 247


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++.+... .+|+++.+.+|.
T Consensus       214 edvA~~v~fL~S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         214 GEIAGAVVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhchhhCCCCCceEEeCCCc
Confidence            9999999999876543 467999999884

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.1e-13  Score=116.99  Aligned_cols=199  Identities=12%  Similarity=0.115  Sum_probs=126.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.+++.|+++|++|++.+|+++..+++.+.          .+++....|   .+..+....
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~----------~~~~~~~~d~~~~~~~~~~~~   70 (245)
T d2ag5a1           5 DGKVIILT----AAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY----------PGIQTRVLDVTKKKQIDQFAN   70 (245)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS----------TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----------cCCceeeeecccccccccccc
Confidence            57899999    9999999999999999999999999987665543321          245556666   334444443


Q ss_pred             CC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          150 GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       150 ~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      .. ++|.+||++|.                    |+.+    ++.++..+++.+..++|++||...  ...  +.  ...
T Consensus        71 ~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~--~~--~~~  144 (245)
T d2ag5a1          71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SVK--GV--VNR  144 (245)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TTB--CC--TTB
T ss_pred             ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--ccC--Cc--cch
Confidence            33 38999999993                    2333    444555556666779999998532  000  00  011


Q ss_pred             CCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          205 VKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       205 ~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      ..|..+|.+++.+.+       ..|+++..|.||.+-.+....     .....+.+.+....|+         ..+...+
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pe  215 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAE  215 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHH
Confidence            112234555444433       238999999999986643211     0112223333333332         1256789


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      |+|+++..++.++.. ..|+++.+.+|..
T Consensus       216 dva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         216 EIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            999999999987643 4679999998853

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.41  E-value=1.9e-12  Score=112.81  Aligned_cols=201  Identities=14%  Similarity=0.174  Sum_probs=120.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|.+|||    ||++.||+.+++.|+++|++|++.+|+++...+.      .. +.....+..+.+|   +++++++++
T Consensus         4 ~gKvalVT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~------~~-~~~g~~~~~~~~Dvs~~~~v~~~~~   72 (247)
T d2ew8a1           4 KDKLAVIT----GGANGIGRAIAERFAVEGADIAIADLVPAPEAEA------AI-RNLGRRVLTVKCDVSQPGDVEAFGK   72 (247)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH------HH-HHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHH------HH-HHcCCcEEEEEeeCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999976422110      00 1112244556666   555555543


Q ss_pred             CC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.    .++.++..+++.+-.++|++||.........    
T Consensus        73 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~----  148 (247)
T d2ew8a1          73 QVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA----  148 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc----
Confidence            22     48999999993                    223    3556666777777789999999764322111    


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.       ..+|+++..|.||.+-.+...........+... ...       ....-+...+|
T Consensus       149 ---~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~-------~~l~r~~~ped  217 (247)
T d2ew8a1         149 ---YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NML-------QAIPRLQVPLD  217 (247)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT-------SSSCSCCCTHH
T ss_pred             ---cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH-HHh-------ccCCCCCCHHH
Confidence               111223455543322       234899999999998765432211111111111 000       01112456899


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++++.++.+... .+|+++.+.+|-
T Consensus       218 vA~~v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         218 LTGAAAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCE
Confidence            99999999876543 467999998874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.41  E-value=6.6e-13  Score=115.81  Aligned_cols=197  Identities=15%  Similarity=0.121  Sum_probs=124.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|.+.+|+++..+.        .+   ..+...+.+|   +++++++++
T Consensus         4 ~GK~alIT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~--------~~---~~~~~~~~~Dv~~~~~v~~~~~   68 (248)
T d2d1ya1           4 AGKGVLVT----GGARGIGRAIAQAFAREGALVALCDLRPEGKEV--------AE---AIGGAFFQVDLEDERERVRFVE   68 (248)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH--------HH---HHTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH--------HH---HcCCeEEEEeCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998653221        11   1234455665   555555544


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||...+.....    
T Consensus        69 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~----  144 (248)
T d2d1ya1          69 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE----  144 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT----
T ss_pred             HHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc----
Confidence            32     48999999993                    2333    555566677777789999999765332111    


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCC-----CchHHHHHHHHhCCCcccCCCCCcceee
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                         ...|..+|.+++.+.       ..+|+++..|.||.+-.+....     .....+.+.+....|+         .-+
T Consensus       145 ---~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~  212 (248)
T d2d1ya1         145 ---NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL---------RRL  212 (248)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT---------SSC
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC---------CCC
Confidence               111223455544332       2348999999999875431100     0000011111111111         124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ...+|+|++++.++.+... .+|+++.+.+|-.
T Consensus       213 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         213 GKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            5789999999999876543 4679999988853

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.41  E-value=5.4e-13  Score=116.02  Aligned_cols=193  Identities=18%  Similarity=0.209  Sum_probs=125.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+++..+++..       ++ ...+..+.+|   +++++++++
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dv~~~~~v~~~~~   72 (244)
T d1nffa_           5 TGKVALVS----GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA-------EL-ADAARYVHLDVTQPAQWKAAVD   72 (244)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HT-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------Hh-hCcceEEEeecCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998765543221       11 2234556666   555555543


Q ss_pred             CC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||...+.....    
T Consensus        73 ~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~----  148 (244)
T d1nffa_          73 TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA----  148 (244)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc----
Confidence            32     38999999993                    2333    444555666666679999999765332211    


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.       ..+|+++..|.||.+-.+....         + .......+     ...+...+|
T Consensus       149 ---~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~---------~-~~~~~~~p-----l~R~~~p~d  210 (244)
T d1nffa_         149 ---CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---------V-PEDIFQTA-----LGRAAEPVE  210 (244)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---------S-CTTCSCCS-----SSSCBCHHH
T ss_pred             ---ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh---------h-hHHHHhcc-----ccCCCCHHH
Confidence               112233555544433       2348999999999886543211         0 00000011     122678999


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|++++.++.+... .+|+++.+.+|.
T Consensus       211 iA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         211 VSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhChhhCCCcCCEEEECCCe
Confidence            99999999876543 467999998875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=8.2e-14  Score=124.89  Aligned_cols=207  Identities=17%  Similarity=0.163  Sum_probs=124.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.+...+........+.......+..+.+|   +++++++++
T Consensus        11 ~gKvalIT----Gas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   86 (297)
T d1yxma1          11 QGQVAIVT----GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   86 (297)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence            68999999    99999999999999999999999999875443221100000011112245556666   555555544


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHH----HHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~----~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+|+.                    |+.++.    .++..+++.+..++|.+|+.+..+.+.     
T Consensus        87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~-----  161 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPL-----  161 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTT-----
T ss_pred             HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccc-----
Confidence            22     48999999993                    334443    444444555667888887644322111     


Q ss_pred             CCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC---chHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          201 EGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                         ...+..+|.+++.+.+       .+|+++..|.||.+..+.....   ....+.+...+..|+         ..+..
T Consensus       162 ---~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~  229 (297)
T d1yxma1         162 ---AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGV  229 (297)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBC
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcC
Confidence               1112234555444332       2489999999999876532111   011111111111111         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      .+|+|++++.++.+... .+|+++.+.+|..
T Consensus       230 pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         230 PEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             THHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence            89999999999976543 4679999998853

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.39  E-value=3.9e-13  Score=117.98  Aligned_cols=204  Identities=16%  Similarity=0.188  Sum_probs=126.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccc-eecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|.+|||    ||++.||+.+++.|+++|++|++.+|+.+..++....    ..+ .....+..+.+|   ++++++++
T Consensus         3 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~----~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           3 TDRVVLIT----GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA----VLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            57899999    9999999999999999999999999987544321100    000 011234455566   56666555


Q ss_pred             cCC-----CccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|++||+||.                     |+.+    ++.++..+++.+-.++|++||...+....   
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---  151 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG---  151 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS---
T ss_pred             HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC---
Confidence            432     38999999983                     2333    44455556666667999999966432111   


Q ss_pred             CCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCC-------CCchHHHHHHHHhCCCcccCCCCCc
Q 018900          199 HVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNN-------KDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                          ....|..+|.+++.+       +..+|+++..+.||.+..+...       ......+.+.+....|+.       
T Consensus       152 ----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-------  220 (258)
T d1iy8a_         152 ----NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK-------  220 (258)
T ss_dssp             ----SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC-------
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC-------
Confidence                111122345443332       2334899999999998543210       001122233333333321       


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                        -+...+|+|++++.++.+... .+|+++.+.+|..
T Consensus       221 --R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         221 --RYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             --SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence              245789999999999976543 4679999998864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.38  E-value=1.3e-12  Score=114.53  Aligned_cols=201  Identities=15%  Similarity=0.147  Sum_probs=126.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+++++.|+++|++|++.+|+.+..++..       .++ ..++..+.+|   +++++++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~~-~~~~~~~~~Dvt~~~~v~~~~~   71 (256)
T d1k2wa_           4 DGKTALIT----GSARGIGRAFAEAYVREGARVAIADINLEAARATA-------AEI-GPAACAIALDVTDQASIDRCVA   71 (256)
T ss_dssp             TTEEEEEE----TCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCceEEEEeeCCCHHHHHHHHH
Confidence            47899999    99999999999999999999999999876554321       122 2345556666   566665554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHH----HH-HhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WA-KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~----~a-~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|++||+||.                    |+.++..+.+    .+ ++.+-.++|++||...+.....   
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---  148 (256)
T d1k2wa_          72 ELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL---  148 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc---
Confidence            32     48999999993                    3444444443    32 3334579999999764332111   


Q ss_pred             CCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchH-----------HHHHHHHhCCCcccCCC
Q 018900          200 VEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEE-----------WFFDRIVRKRPVPIPGS  261 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  261 (349)
                          ...|..+|.+++.+.       ..+|+++..|.||.+-.+.... ...           ...+.+....|+     
T Consensus       149 ----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pl-----  218 (256)
T d1k2wa_         149 ----VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG-VDAKFADYENLPRGEKKRQVGAAVPF-----  218 (256)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH-HHHHHHHHHTCCTTHHHHHHHHHSTT-----
T ss_pred             ----ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh-hhhhhhhhccCChHHHHHHHHhcCCC-----
Confidence                111223455544333       2348999999999886653211 000           011111111121     


Q ss_pred             CCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          262 GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       262 ~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                          .-+...+|+|++++.++.+... ..|+++.+.+|..++
T Consensus       219 ----gR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         219 ----GRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             ----SSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             ----CCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence                1245789999999998876543 467999999886543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2e-12  Score=112.86  Aligned_cols=199  Identities=16%  Similarity=0.151  Sum_probs=126.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.+++.|+++|++|++.+|+++..+++..       ++  .++..+.+|   +++++++++
T Consensus         5 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~-------~~--~~~~~~~~Dvs~~~~v~~~~~   71 (250)
T d1ydea1           5 AGKVVVVT----GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ-------EL--PGAVFILCDVTQEDDVKTLVS   71 (250)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HC--TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------hc--CCCeEEEccCCCHHHHHHHHH
Confidence            58999999    999999999999999999999999998765543221       11  234556666   566665554


Q ss_pred             CC-----CccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      ..     ++|++||+||.                     |+.+    ++.++..+++.+ .++|++||...+.....   
T Consensus        72 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~---  147 (250)
T d1ydea1          72 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQ---  147 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTT---
T ss_pred             HHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccC---
Confidence            32     48999999983                     2333    445555666544 68999999764322111   


Q ss_pred             CCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCC-----CCCchHHHHHHHHhCCCcccCCCCCccee
Q 018900          200 VEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGN-----NKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                          ...|..+|.+++.+.       ..+|+++..|.||++--+..     ...-....++......|+.         -
T Consensus       148 ----~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R  214 (250)
T d1ydea1         148 ----AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG---------R  214 (250)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS---------S
T ss_pred             ----cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC---------C
Confidence                111223455543332       33489999999998854310     0001112233333333321         2


Q ss_pred             eeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCcc
Q 018900          268 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  301 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~  301 (349)
                      +...+|+|++++.++.+..-.+|+++.+.+|..+
T Consensus       215 ~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         215 MGQPAEVGAAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             CCCHHHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence            4578999999998886433346799999988543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=1.6e-13  Score=120.65  Aligned_cols=200  Identities=15%  Similarity=0.183  Sum_probs=116.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++++|+++..++..       .++..  ..+..+.+|   +++++++
T Consensus         7 kgK~alVT----Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~-------~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           7 KAKTVLVT----GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL-------SKWQKKGFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCceEEEeccCCCHHHHHHH
Confidence            58999999    99999999999999999999999999876554321       11111  234556666   4455444


Q ss_pred             hc----C--CCccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VG----G--VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~----~--~~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++    .  -.+|++||+||.                    |+.+    ++.++..+++.+-.++|++||......... 
T Consensus        76 ~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~-  154 (259)
T d1xq1a_          76 MQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV-  154 (259)
T ss_dssp             HHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------
T ss_pred             HHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc-
Confidence            43    2  138999999993                    3333    445555666667779999999654322111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                            ...|..+|.+++.+.+       .+|+++..|.||.+-.+...........+.+....|+         ..+..
T Consensus       155 ------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~  219 (259)
T d1xq1a_         155 ------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL---------GRFGE  219 (259)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CC
T ss_pred             ------cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCC---------CCCcC
Confidence                  1112335555443332       3489999999999866543221111111111112211         12457


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|.+++.++.+... ..|+++.+.+|.
T Consensus       220 pedvA~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         220 PEEVSSLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             GGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence            88999999998876543 456899998874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.37  E-value=2.3e-12  Score=113.02  Aligned_cols=200  Identities=16%  Similarity=0.198  Sum_probs=125.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||++.||++++++|+++|++|++++|+++..++..       +++...  .+..+.+|   .++++++
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~-------~~~~~~~~~~~~~~~D~s~~~~~~~~   73 (258)
T d1ae1a_           5 KGTTALVT----GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL-------EIWREKGLNVEGSVCDLLSRTERDKL   73 (258)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCceEEEeecCCHHHHHHH
Confidence            58999999    99999999999999999999999999875544321       122222  23445566   4544443


Q ss_pred             h----cCC--CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 V----GGV--TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~----~~~--~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +    +..  .+|++||+++.                    |+.+    ++.++..+++.+..++|++||......... 
T Consensus        74 ~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~-  152 (258)
T d1ae1a_          74 MQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS-  152 (258)
T ss_dssp             HHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc-
Confidence            3    222  37999999993                    2223    444555666667789999999765432211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC-----chHHHHHHHHhCCCcccCCCCCcc
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                            ...+..+|.+++.+.+       ..|+++..|.||.+..+.....     ......+.+....|+.        
T Consensus       153 ------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg--------  218 (258)
T d1ae1a_         153 ------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG--------  218 (258)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC--------
T ss_pred             ------chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC--------
Confidence                  1112234544433332       3489999999999976542211     1223344444443331        


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                       .+...+|+|.+++.++.+... .+|+.+.+.+|-
T Consensus       219 -R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         219 -RAGKPQEVSALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -CCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence             256789999999999976544 467899998874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.36  E-value=4.4e-13  Score=117.83  Aligned_cols=209  Identities=12%  Similarity=0.151  Sum_probs=126.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++++|+.+...+....    ..+.....+..+.+|   +++++++++
T Consensus         8 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----~~~~~g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           8 VNKTIIVT----GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEK----VGKEFGVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             TTEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHH----HHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHHhCCceEEEEccCCCHHHHHHHHH
Confidence            57999999    9999999999999999999999999988655432110    001112245556666   555555553


Q ss_pred             ----CC-CccEEEeCCCC--------------------Chhh----HHHHHHHHH-hCCCcEEEEeccccccCCCCCCCC
Q 018900          150 ----GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAK-SSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ----~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~-~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                          .. ++|++||+|+.                    |+.+    ++.++..+. +.+..+++..++...+........
T Consensus        80 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          80 QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             HHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc
Confidence                22 48999999983                    2333    334444443 334456777776554322111000


Q ss_pred             CCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          200 VEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      .......|..+|.+++.+       +..+|+++..|.||.+-.+.... ....+.+.+....|+..         +...+
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~R---------~g~pe  229 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPLNR---------FAQPE  229 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTTSS---------CBCGG
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc-cCHHHHHHHHhcCCCCC---------CcCHH
Confidence            000011122345554333       23348999999999986543222 23344455555544322         34678


Q ss_pred             HHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      |+|++++.++.+... .+|+++.+.+|.
T Consensus       230 dvA~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         230 EMTGQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHHhcchhCCCcCceEEECCCe
Confidence            999999998876543 467999999885

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.35  E-value=2.1e-12  Score=113.37  Aligned_cols=199  Identities=13%  Similarity=0.179  Sum_probs=126.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||++.||+.+++.|+++|++|++++|+++..++..       .++..  ..+..+.+|   +++++++
T Consensus         4 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~~~~~g~~~~~~~~Dv~~~~~v~~~   72 (260)
T d1zema1           4 NGKVCLVT----GAGGNIGLATALRLAEEGTAIALLDMNREALEKAE-------ASVREKGVEARSYVCDVTSEEAVIGT   72 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            57899999    99999999999999999999999999875544321       12222  234556666   5555555


Q ss_pred             hcCC-----CccEEEeCCCC---------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VGGV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~~~-----~~d~Vi~~a~~---------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++..     ++|++||++|.                     |+.+    ++.++..+++.+-.++|++||...+..... 
T Consensus        73 ~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~-  151 (260)
T d1zema1          73 VDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN-  151 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT-
T ss_pred             HHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc-
Confidence            5432     48999999983                     2233    445555566666779999999764332211 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCC---------------CCCchHHHHHHHHhCCC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGN---------------NKDCEEWFFDRIVRKRP  255 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~---------------~~~~~~~~~~~~~~~~~  255 (349)
                            ...|..+|.+++.+.+       .+|+++..+.||.+-.+..               .......+.+.+....|
T Consensus       152 ------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  225 (260)
T d1zema1         152 ------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP  225 (260)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCC
Confidence                  1112334555444332       3489999999999865421               01112223333333333


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +.         -+...+|+|++++.++.+... .+|+++.+.+|
T Consensus       226 l~---------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         226 MR---------RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             TS---------SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CC---------CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            32         235678999999999976543 45688888765

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.4e-13  Score=120.77  Aligned_cols=208  Identities=15%  Similarity=0.138  Sum_probs=126.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      .+|.+|||    ||++.||+.++++|+++|++|++++|+.+...+.......   .....++..+.+|   +++++++++
T Consensus         2 ~GKvalIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (254)
T d2gdza1           2 NGKVALVT----GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE---QFEPQKTLFIQCDVADQQQLRDTFR   74 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT---TSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH---hcCCCcEEEEEeecCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987554332111000   1112245556666   555555553


Q ss_pred             CC-----CccEEEeCCCC------------Chh----hHHHHHHHHHhCC---CcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK------------NLD----AVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~------------~~~----~~~~ll~~a~~~g---v~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                      ..     ++|++||+|+.            |+.    .++.++..+++.+   ..++|++||...+-+...       ..
T Consensus        75 ~~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~-------~~  147 (254)
T d2gdza1          75 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------QP  147 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------CH
T ss_pred             HHHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC-------cc
Confidence            22     48999999994            233    3445555555543   257999999764322111       11


Q ss_pred             CCCCChHHHHHHH---------HhhCCcEEEEecCceeeCCCCCC-------chHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          206 KPDAGHVQVEKYI---------SENFSNWASFRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       206 ~~~~~k~~~ek~~---------~~~~~~~~ilR~~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                      .|..+|.+++.+.         ...|+++..|.||.+--+.....       ....+.+.+...-|         ...+.
T Consensus       148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~  218 (254)
T d2gdza1         148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK---------YYGIL  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHH---------HHCCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCC---------CCCCc
Confidence            1234565544332         23479999999998743211000       00000111111101         01245


Q ss_pred             eHHHHHHHHHHHhcCCCccCCCEEEeeCCCccCHH
Q 018900          270 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  304 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~~t~~  304 (349)
                      ..+|+|++++.++.++. .+|+++.+.+|..+.+.
T Consensus       219 ~pedvA~~v~fL~s~~~-itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         219 DPPLIANGLITLIEDDA-LNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             CHHHHHHHHHHHHHCTT-CSSCEEEEETTTEEEEC
T ss_pred             CHHHHHHHHHHHHcCCC-CCCCEEEECCCCeeecc
Confidence            67999999999998765 56799999998766543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.34  E-value=2.2e-12  Score=113.82  Aligned_cols=205  Identities=17%  Similarity=0.162  Sum_probs=129.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|.+|||    ||++.||+.++++|+++|++|++++|+.+..++..       .++.. ..+.++.+|   ++++++++
T Consensus         5 ~gKvalIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~-------~~l~~~~~~~~~~~Dv~~~~~v~~~~   73 (268)
T d2bgka1           5 QDKVAIIT----GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVC-------NNIGSPDVISFVHCDVTKDEDVRNLV   73 (268)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHhcCCCceEEEEccCCCHHHHHHHH
Confidence            57899999    99999999999999999999999999875544321       11111 123445555   56666655


Q ss_pred             cCC-----CccEEEeCCCC----------------------Ch----hhHHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK----------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~----------------------~~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +..     ++|++||+||.                      |+    ..++.++..+++.+-.++|++||...+....+ 
T Consensus        74 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~-  152 (268)
T d2bgka1          74 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-  152 (268)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-
T ss_pred             HHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc-
Confidence            422     48999999982                      22    23556666777777789999998654322111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNI  268 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (349)
                           ....|..+|.+++.+.+       .+|+++..|.||.+-.+.....  ......+....... ...      ..+
T Consensus       153 -----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~------gr~  220 (268)
T d2bgka1         153 -----VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-NLK------GTL  220 (268)
T ss_dssp             -----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-SSC------SCC
T ss_pred             -----cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcc-ccC------CCC
Confidence                 01112335655444332       3489999999999877654321  11112222222111 111      124


Q ss_pred             eeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          269 AHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       269 i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      ...+|+|++++.++.+... .+|+++.+.+|-..
T Consensus       221 ~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         221 LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhChhhCCccCceEEECcCccc
Confidence            5789999999999976543 46799999988533

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.34  E-value=1.5e-12  Score=113.78  Aligned_cols=200  Identities=17%  Similarity=0.209  Sum_probs=123.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-cCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|++|||    ||++.||+.+++.|+++|++|++.+|+.+..++..+       ++. ..++..+.+|   ++++++++
T Consensus         5 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (251)
T d1zk4a1           5 DGKVAIIT----GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-------SVGTPDQIQFFQHDSSDEDGWTKLF   73 (251)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HhCCCCcEEEEEccCCCHHHHHHHH
Confidence            57999999    999999999999999999999999998754433211       111 1245566676   55555554


Q ss_pred             cCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCC-cEEEEeccccccCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV-KQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +..     ++|++||+|+.                    |+.+    ++.++..+++.+. .++|++||...+....   
T Consensus        74 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~---  150 (251)
T d1zk4a1          74 DATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP---  150 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---
T ss_pred             HHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC---
Confidence            432     48999999993                    2333    4455556666665 4899999965432211   


Q ss_pred             CCCCCCCCCCCChHHHHHH---------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeee
Q 018900          199 HVEGDVVKPDAGHVQVEKY---------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  269 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~---------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  269 (349)
                          ....|..+|.+++.+         +.++|+++..|.||.+..+......-.   +....... .++     ..-+.
T Consensus       151 ----~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~-~~p-----l~R~~  217 (251)
T d1zk4a1         151 ----SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA---EEAMSQRT-KTP-----MGHIG  217 (251)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH---HHHHTSTT-TCT-----TSSCB
T ss_pred             ----CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH---HHHHHHHh-CCC-----CCCCc
Confidence                111222345443322         234479999999998865421110000   11111100 011     11256


Q ss_pred             eHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          270 HVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       270 ~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ..+|+|++++.++.+... ..|+++.+.+|-
T Consensus       218 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         218 EPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence            889999999999876543 467899998873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.34  E-value=3.7e-12  Score=111.73  Aligned_cols=200  Identities=15%  Similarity=0.169  Sum_probs=127.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~  147 (349)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..       .++...  .+..+.+|   +++++++
T Consensus         7 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~~~~~g~~~~~~~~Dv~~~~~v~~~   75 (259)
T d2ae2a_           7 EGCTALVT----GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL-------TQWRSKGFKVEASVCDLSSRSERQEL   75 (259)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCceEEEeeCCCHHHHHHH
Confidence            57899999    99999999999999999999999999876554321       122222  33455666   5555544


Q ss_pred             hc----C--CCccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          148 VG----G--VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       148 ~~----~--~~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      ++    .  .++|++||+||.                    |+.+    ++.++..+++.+-.++|++||........  
T Consensus        76 ~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--  153 (259)
T d2ae2a_          76 MNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP--  153 (259)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc--
Confidence            32    2  248999999993                    2333    44555566777778999999965432211  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCC----CCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNN----KDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                           ....|..+|.+++.+.+       .+|+++..|.||.+-.+...    .......++.+....|+.         
T Consensus       154 -----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------  219 (259)
T d2ae2a_         154 -----YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------  219 (259)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------
T ss_pred             -----cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------
Confidence                 11112234555443332       24899999999988543210    001122334444444432         


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      -+...+|+|++++.++.+... .+|+++.+.+|-
T Consensus       220 R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         220 RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence            245689999999998876543 467899998874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.33  E-value=8.2e-12  Score=109.04  Aligned_cols=196  Identities=14%  Similarity=0.132  Sum_probs=125.9

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc----CC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG----GV  151 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~----~~  151 (349)
                      ++|||    ||++.||+.++++|.++|++|.+.+|+.+..+++.        .+......++..|.++++++++    ..
T Consensus         2 TAlVT----Gas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~--------~~~~~~~~~dv~~~~~~~~~~~~~~~~~   69 (252)
T d1zmta1           2 TAIVT----NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE--------AFAETYPQLKPMSEQEPAELIEAVTSAY   69 (252)
T ss_dssp             EEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH--------HHHHHCTTSEECCCCSHHHHHHHHHHHH
T ss_pred             EEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--------hhhCcEEEeccCCHHHHHHHHHHHHHHc
Confidence            58999    99999999999999999999999999876554321        1111223445555444444432    22


Q ss_pred             -CccEEEeCCCC---------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 018900          152 -TFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (349)
Q Consensus       152 -~~d~Vi~~a~~---------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~  205 (349)
                       ++|++||+|+.                     |+.    .++.++..+++.+-.++|++||...+.....       ..
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~-------~~  142 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE-------LS  142 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT-------CH
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc-------cc
Confidence             38999999882                     222    3455666677767779999999765432211       11


Q ss_pred             CCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCc-------hHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          206 KPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDC-------EEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       206 ~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                      .|..+|.+++.+.       ..+|+++..|.||.+-.+......       .....+.+.+..|+..         +...
T Consensus       143 ~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R---------~g~p  213 (252)
T d1zmta1         143 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR---------LGTQ  213 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSS---------CBCH
T ss_pred             ccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCC---------CcCH
Confidence            1233455543332       234899999999998766433211       1223344444333321         4578


Q ss_pred             HHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          272 RDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      +|+|++++.++.+... .+|+++.+.+|-
T Consensus       214 edvA~~v~fL~S~~s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         214 KELGELVAFLASGSCDYLTGQVFWLAGGF  242 (252)
T ss_dssp             HHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             HHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence            9999999999987654 467999999884

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.32  E-value=2.5e-12  Score=112.87  Aligned_cols=207  Identities=15%  Similarity=0.164  Sum_probs=122.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC-CcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.+ ..+++..    .+.+.....+..+.+|   ++++++++
T Consensus         3 ~gK~alIT----Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~----~~~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (260)
T d1x1ta1           3 KGKVAVVT----GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA----GLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHH----HHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CcCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH----HHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            47899999    99999999999999999999999999752 2221110    0001112234455566   56666665


Q ss_pred             cCC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Q 018900          149 GGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       149 ~~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      +..     ++|++||+||.                    |+.    .++.++..+++.+-.++|++||...+.....   
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---  151 (260)
T d1x1ta1          75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN---  151 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC---
Confidence            433     48999999993                    222    3556667777777789999999764332111   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc-------ccCCCCCcc
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-------PIPGSGMQF  265 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  265 (349)
                          ...|..+|.+++.+.+       .+|+++..|.||.+-.+....     .+.........       .........
T Consensus       152 ----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Pl  222 (260)
T d1x1ta1         152 ----KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK-----QISALAEKNGVDQETAARELLSEKQPS  222 (260)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHHHCTT
T ss_pred             ----cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh-----hhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence                1112334555443332       248999999999886553221     11111110000       000000001


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .-+...+|+|++++.++.+... .+|+++.+.+|-
T Consensus       223 ~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence            2356789999999999876543 467899998873

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.32  E-value=8.2e-12  Score=109.57  Aligned_cols=203  Identities=16%  Similarity=0.166  Sum_probs=126.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCCCCCcccceecC--CCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~  145 (349)
                      -++|.+|||    ||++.||+.++++|+++|++|++.+|+.+. .+++       .+++...  .+..+.+|   +++++
T Consensus         5 L~gK~alIT----Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~-------~~~~~~~g~~~~~~~~Dvt~~~~v~   73 (261)
T d1geea_           5 LEGKVVVIT----GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV-------LEEIKKVGGEAIAVKGDVTVESDVI   73 (261)
T ss_dssp             GTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCEEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-------HHHHHhcCCcEEEEEccCCCHHHHH
Confidence            357899999    999999999999999999999999998642 2111       1122222  23455566   56665


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCC-cEEEEeccccccCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV-KQFLFISSAGIYKPAD  195 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv-~~~i~~Ss~~vy~~~~  195 (349)
                      ++++..     ++|++||+||.                    |+.+    ++.++..+++.+. .++|++||...+....
T Consensus        74 ~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~  153 (261)
T d1geea_          74 NLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc
Confidence            555432     48999999993                    2333    5555666666664 4588899865432211


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCc-hHHHHHHHHhCCCcccCCCCCccee
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                      .       ...|..+|.+++.+.       ..+|+++..|.||.+..+...... -......+....|+.         -
T Consensus       154 ~-------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R  217 (261)
T d1geea_         154 L-------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------Y  217 (261)
T ss_dssp             T-------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------S
T ss_pred             c-------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------C
Confidence            1       111223455544433       234899999999998654321110 011222233333321         2


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCcc
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  301 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~  301 (349)
                      +...+|+|++++.++.+... .+|+++.+.+|..+
T Consensus       218 ~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         218 IGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence            45789999999999876543 46799999988643

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.30  E-value=1.9e-12  Score=112.34  Aligned_cols=198  Identities=15%  Similarity=0.147  Sum_probs=125.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.+...+...       ++ ...+..+.+|   +++++++++
T Consensus         4 ~gK~alIt----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~Dls~~~~i~~~~~   71 (241)
T d2a4ka1           4 SGKTILVT----GAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-------AL-EAEAIAVVADVSDPKAVEAVFA   71 (241)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------TC-CSSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------Hc-CCceEEEEecCCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998765433211       11 1244556666   566655554


Q ss_pred             CC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      ..     ++|++||+|+.                    |+.+...+.+++...  +.+.++.+|+.+....+.       
T Consensus        72 ~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~-------  144 (241)
T d2a4ka1          72 EALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG-------  144 (241)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHH-------
T ss_pred             HHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccC-------
Confidence            33     38999999883                    233444444433221  233555566544321110       


Q ss_pred             CCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHH
Q 018900          203 DVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  275 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  275 (349)
                       ...+..+|.+++.+.+.       +|+++..+.||.+-.+... .+.....+......|+.         .+...+|+|
T Consensus       145 -~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~-~~~~~~~~~~~~~~p~~---------r~~~p~dva  213 (241)
T d2a4ka1         145 -LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-GLPPWAWEQEVGASPLG---------RAGRPEEVA  213 (241)
T ss_dssp             -HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-TSCHHHHHHHHHTSTTC---------SCBCHHHHH
T ss_pred             -ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH-hhhHhHHHHHHhCCCCC---------CCcCHHHHH
Confidence             11133456666554432       3799999999998554322 23334455555554432         245789999


Q ss_pred             HHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          276 SMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       276 ~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      ++++.++.+... .+|+++.+.+|..
T Consensus       214 ~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         214 QAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhcchhCCCcCceEEeCCCcc
Confidence            999999976543 4678999998854

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.28  E-value=4.6e-12  Score=111.01  Aligned_cols=198  Identities=20%  Similarity=0.253  Sum_probs=124.5

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~~  148 (349)
                      +|.+|||    ||++.||+.++++|+++|++|++.+|+++..++..       .++...  .+..+.+|   ++++++++
T Consensus         2 gKValIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~-------~~l~~~g~~~~~~~~Dvs~~~~v~~~~   70 (257)
T d2rhca1           2 SEVALVT----GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL-------KELREAGVEADGRTCDVRSVPEIEALV   70 (257)
T ss_dssp             CCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEeecCCHHHHHHHH
Confidence            5778999    99999999999999999999999999875544321       122222  34556666   55555554


Q ss_pred             cC----C-CccEEEeCCCC--------------------ChhhHHHHHHHHH------hCCCcEEEEeccccccCCCCCC
Q 018900          149 GG----V-TFDVVLDNNGK--------------------NLDAVRPVADWAK------SSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       149 ~~----~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~------~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +.    . ++|++||+||.                    |+.+...+.+++.      +.+..++|++||...+..... 
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~-  149 (257)
T d2rhca1          71 AAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-  149 (257)
T ss_dssp             HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc-
Confidence            32    2 48999999993                    4556666666553      334568999998654332111 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCC----------CchHHHHHHHHhCCCcccCC
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~  260 (349)
                            ...|..+|.+++.+.+       .+|+++..+.||.+-.+....          .......+.+....|+-   
T Consensus       150 ------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg---  220 (257)
T d2rhca1         150 ------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG---  220 (257)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---
T ss_pred             ------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---
Confidence                  1112334555443332       237899999999885432100          01122233333333221   


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                            -+...+|+|++++.++.+... .+|+++.+.+|
T Consensus       221 ------R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         221 ------RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             ------SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ------CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence                  245789999999999976543 46799999887

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.27  E-value=1.4e-11  Score=108.37  Aligned_cols=204  Identities=15%  Similarity=0.159  Sum_probs=120.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.+..++.......  ......++..+.+|   .++++++++
T Consensus         4 ~gKvalVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~~~~~Dvt~~~~v~~~~~   77 (264)
T d1spxa_           4 AEKVAIIT----GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILA--AGVSEQNVNSVVADVTTDAGQDEILS   77 (264)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCCcCceEEEEccCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987654432110000  00112245667777   555555554


Q ss_pred             CC-----CccEEEeCCCC------------------------Chhh----HHHHHHHHHhCCCcEEEEecc-cccc-CCC
Q 018900          150 GV-----TFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISS-AGIY-KPA  194 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~------------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss-~~vy-~~~  194 (349)
                      ..     ++|++||+||.                        |+.+    ++.++..+++.+- ++|.++| .+.+ +..
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~S~~~~~~~~~  156 (264)
T d1spxa_          78 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKG-EIVNISSIASGLHATP  156 (264)
T ss_dssp             HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCTTSSSSCCT
T ss_pred             HHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccC-cceeeeeeccccccCC
Confidence            32     48999999983                        2222    4455555555543 4555554 3322 211


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCC--------chHHHHHHHHhCCCcccC
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIP  259 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~  259 (349)
                      .        ...|..+|.+++.+.       ..+|+++..|.||.+--+.....        ........+.+..|+.  
T Consensus       157 ~--------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--  226 (264)
T d1spxa_         157 D--------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG--  226 (264)
T ss_dssp             T--------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS--
T ss_pred             C--------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC--
Confidence            1        111223455543332       23489999999999865432211        1111122222222221  


Q ss_pred             CCCCcceeeeeHHHHHHHHHHHhcCC-C-ccCCCEEEeeCCCc
Q 018900          260 GSGMQFTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLVSDRA  300 (349)
Q Consensus       260 ~~~~~~~~~i~v~Dva~~~~~~~~~~-~-~~~~~~~~i~~~~~  300 (349)
                             -+...+|+|++++.++.++ . -.+|+++.+.+|..
T Consensus       227 -------R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         227 -------VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             -------SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             -------CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence                   2456899999999998754 2 24679999988753

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.27  E-value=3.8e-12  Score=111.21  Aligned_cols=197  Identities=16%  Similarity=0.238  Sum_probs=121.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.+++.|+++|++|++.+|+++..+++.       .++ ......+.+|   +++++++++
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-------~~~-~~~~~~~~~Dv~~~~~~~~~~~   72 (253)
T d1hxha_           5 QGKVALVT----GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA-------AEL-GERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------HHH-CTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHh-CCCeEEEEeecCCHHHHHHHHH
Confidence            57899999    99999999999999999999999999875544321       111 1233445555   555555544


Q ss_pred             CC-----CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 GV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      ..     ++|++||+||.                    |+.    .++.++..+++.+ .++|++||...+.....    
T Consensus        73 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~----  147 (253)
T d1hxha_          73 AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----
T ss_pred             HHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccc----
Confidence            32     48999999993                    223    3555566666555 79999999664322111    


Q ss_pred             CCCCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCc-cc--CCCCCc-cee
Q 018900          201 EGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PI--PGSGMQ-FTN  267 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~  267 (349)
                         ...|..+|.+++.+.+    |     +++++..|.||.+..+.         .+........ ..  ...... ...
T Consensus       148 ---~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~---------~~~~~~~~~~~~~~~~~~~~~~~gr  215 (253)
T d1hxha_         148 ---YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM---------MQASLPKGVSKEMVLHDPKLNRAGR  215 (253)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH---------HHHHSCTTCCHHHHBCBTTTBTTCC
T ss_pred             ---cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh---------HHhhCcchhhHHHHHhCccccccCC
Confidence               1122334554333222    2     24888999999886432         1111111100 00  000001 123


Q ss_pred             eeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          268 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                      +...+|+|++++.++.+... .+|+++++.+|
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         216 AYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             EECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            67789999999999876543 46799999877

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.27  E-value=7.2e-12  Score=109.59  Aligned_cols=193  Identities=16%  Similarity=0.138  Sum_probs=119.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~~~  149 (349)
                      |.+|||    ||++.||+.++++|+++|++|++.+|+++..+++.       .++..  ..+..+.+|   +++++++++
T Consensus         2 KValIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~i~~~g~~~~~~~~Dv~~~~~v~~~~~   70 (255)
T d1gega_           2 KVALVT----GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA-------SEINQAGGHAVAVKVDVSDRDQVFAAVE   70 (255)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEc----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            446999    99999999999999999999999999876554321       12222  234456666   555555443


Q ss_pred             C----C-CccEEEeCCCC--------------------ChhhHHHH----HHHHHhCC-CcEEEEeccccccCCCCCCCC
Q 018900          150 G----V-TFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSG-VKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ~----~-~~d~Vi~~a~~--------------------~~~~~~~l----l~~a~~~g-v~~~i~~Ss~~vy~~~~~~~~  199 (349)
                      .    . ++|++||+||.                    |+.+...+    +..+++.+ ..++|++||...+.....   
T Consensus        71 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~---  147 (255)
T d1gega_          71 QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE---  147 (255)
T ss_dssp             HHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc---
Confidence            2    2 48999999993                    34444444    44334443 467999998664322111   


Q ss_pred             CCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHH---------------HHHhCCCcc
Q 018900          200 VEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFD---------------RIVRKRPVP  257 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~---------------~~~~~~~~~  257 (349)
                          ...|..+|.+++.+.       ..+|+++..|.||.+-.+.     ...+..               .+.+..|+ 
T Consensus       148 ----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-  217 (255)
T d1gega_         148 ----LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----WAEIDRQVSEAAGKPLGYGTAEFAKRITL-  217 (255)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----HHHHHHHHHHHHTCCTTHHHHHHHTTCTT-
T ss_pred             ----cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-----HhhhhhhhHhhhcccchhHHHHHHhcCCC-
Confidence                111223455543332       2348999999999874331     111111               12222221 


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                              ..+...+|+|++++.++.+... .+|+++.+.+|-
T Consensus       218 --------~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         218 --------GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             --------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             --------CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence                    1256789999999999876543 467999998884

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.25  E-value=3.5e-11  Score=105.13  Aligned_cols=201  Identities=12%  Similarity=0.127  Sum_probs=119.5

Q ss_pred             ccceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l  144 (349)
                      -++|++|||    ||+|  .||+.++++|+++|++|++.+|+++.....        .++.  ......+.+|   ++++
T Consensus         6 L~gK~alIT----Gas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~D~~~~~~v   73 (256)
T d1ulua_           6 LSGKKALVM----GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA--------EKLAEALGGALLFRADVTQDEEL   73 (256)
T ss_dssp             CTTCEEEEE----SCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH--------HHHHHHTTCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH--------HHhhhccCcccccccccCCHHHH
Confidence            357899999    9998  799999999999999998888875322111        0111  1133455555   5666


Q ss_pred             HhhhcCC-----CccEEEeCCCC------------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~------------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                      +++++..     ++|++||+++.                        |+.+...+.+++...  +-.++|++||......
T Consensus        74 ~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~  153 (256)
T d1ulua_          74 DALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV  153 (256)
T ss_dssp             HHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC
Confidence            5555432     38999999983                        122334444443322  1257999998664332


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...       ...|..+|.+++.+.       ..+|+++..+.||.+..+..... ....+.+.+.+..|+..       
T Consensus       154 ~~~-------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R-------  219 (256)
T d1ulua_         154 VPK-------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRR-------  219 (256)
T ss_dssp             CTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSS-------
T ss_pred             CCC-------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCC-------
Confidence            111       111223455544332       23489999999999876543322 12233444444444322       


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                        +...+|+|++++.++.+... .+|+++.+.+|..
T Consensus       220 --~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         220 --NITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             --CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence              34679999999999886644 4679999988854

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.25  E-value=7.5e-12  Score=110.66  Aligned_cols=204  Identities=13%  Similarity=0.133  Sum_probs=124.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccccee-----cCCCeEEEcC---hhhH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-----SAGGKTVWGD---PAEV  144 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~D---~~~l  144 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.+..++..       .++.     ...+..+.+|   ++++
T Consensus         3 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~-------~~i~~~~~~~~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           3 SGKSVIIT----GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK-------QQILKAGVPAEKINAVVADVTEASGQ   71 (274)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCCGGGEEEEECCTTSHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHHcCCCCcceEEEEeeCCCHHHH
Confidence            57899999    99999999999999999999999999875543221       1121     1245566776   5555


Q ss_pred             HhhhcCC-----CccEEEeCCCC----------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK----------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~----------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +++++..     ++|++||+||.                      |+.    .++.++..+++.+-.+++++||...+..
T Consensus        72 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~  151 (274)
T d1xhla_          72 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA  151 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc
Confidence            5554332     48999999983                      222    3555666667677678888887553222


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCC----CchHHHHHHHHhCCCcccCCCC
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKRPVPIPGSG  262 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~  262 (349)
                      ...       ...|..+|.+++.+.       ..+|+++..|.||.+-.+....    .....-.........-.++-  
T Consensus       152 ~~~-------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl--  222 (274)
T d1xhla_         152 HSG-------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV--  222 (274)
T ss_dssp             CTT-------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT--
T ss_pred             CCC-------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC--
Confidence            111       112233455544333       2348999999999986542110    00011111111111101110  


Q ss_pred             CcceeeeeHHHHHHHHHHHhcC-C-CccCCCEEEeeCCC
Q 018900          263 MQFTNIAHVRDLSSMLTLAVEN-P-EAASSNIFNLVSDR  299 (349)
Q Consensus       263 ~~~~~~i~v~Dva~~~~~~~~~-~-~~~~~~~~~i~~~~  299 (349)
                         .-+...+|+|++++.++.. . .-.+|+++.+.+|.
T Consensus       223 ---gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         223 ---GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             ---SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             ---CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence               1245789999999988863 2 22467999999885

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.24  E-value=4e-11  Score=107.31  Aligned_cols=213  Identities=14%  Similarity=0.158  Sum_probs=130.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC-C-CcccceecC--CCeEEEcChhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-F-NRFNEIVSA--GGKTVWGDPAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~-~-~~~~~l~~~--~~~~~~~D~~~l~~~~  148 (349)
                      ++|.+|||    ||++.||+.++++|+++|++|++.+|+.+......... . ....++...  ....+..|.+++++++
T Consensus         6 ~gKvalIT----Gas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           6 DGRVVLVT----GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            47899999    99999999999999999999999998764332111100 0 000111111  1234444554444433


Q ss_pred             ----cCC-CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccc-cCCCCCCC
Q 018900          149 ----GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGI-YKPADEPP  198 (349)
Q Consensus       149 ----~~~-~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~v-y~~~~~~~  198 (349)
                          +.. ++|++||+||.                    |+.+    ++.++..+++.+-.++|++||... ++....  
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~--  159 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ--  159 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC--
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc--
Confidence                333 38999999993                    3333    555666677777789999999653 333211  


Q ss_pred             CCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          199 HVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                            ..|..+|.+++.+.       ..+|+++..+.||.+--...  .....                  ....++..
T Consensus       160 ------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~--~~~~~------------------~~~~~~~P  213 (302)
T d1gz6a_         160 ------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE--TVMPE------------------DLVEALKP  213 (302)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG--GGSCH------------------HHHHHSCG
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh--hcCcH------------------hhHhcCCH
Confidence                  12223455543332       23489999999986522110  00000                  11223456


Q ss_pred             HHHHHHHHHHhcCCCccCCCEEEeeCC-------------------CccCHHHHHHHHHHHhCCC
Q 018900          272 RDLSSMLTLAVENPEAASSNIFNLVSD-------------------RAVTLDGMAKLCAQAAGLP  317 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~~~~~~~~i~~~-------------------~~~t~~el~~~~~~~~g~~  317 (349)
                      +|+|.+++.++.+....+|+++.+.+|                   +++|.+++.+.+.++...+
T Consensus       214 edvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         214 EYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             GGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             HHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            899999999886544455677666443                   3568899999988887644

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.22  E-value=1.9e-11  Score=106.98  Aligned_cols=184  Identities=15%  Similarity=0.189  Sum_probs=118.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~~  147 (349)
                      ...||||    ||+|.||+.++++|.++|+ +|+++.|+....+...    ....++...  .+.++.+|   .+++.++
T Consensus         9 ~gt~lVT----Ggs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~----~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           9 TGTVLVT----GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAG----ELVAELEALGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHH----HHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHH----HHHHHHHhccccccccccccchHHHHHHh
Confidence            3589999    9999999999999999998 5888888643322111    011222222  35566666   5666665


Q ss_pred             hcCC----CccEEEeCCCC--------------------ChhhHHHHHHHHHhCCCcEEEEecccc-ccCCCCCCCCCCC
Q 018900          148 VGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEG  202 (349)
Q Consensus       148 ~~~~----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~gv~~~i~~Ss~~-vy~~~~~~~~~e~  202 (349)
                      +...    .+|.|+|+++.                    |+.+..++.++++..+..+||++||+. .+|.....     
T Consensus        81 ~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~-----  155 (259)
T d2fr1a1          81 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLG-----  155 (259)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCT-----
T ss_pred             hccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccH-----
Confidence            5433    48999999993                    456778888888888888999999965 44433221     


Q ss_pred             CCCCCCCChHHHHHHHHh---hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHH
Q 018900          203 DVVKPDAGHVQVEKYISE---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  279 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  279 (349)
                         .|..+|..++.+.++   .|++++.|.||.+.+++....        ... ..+...|     ...+..+++++++.
T Consensus       156 ---~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~--------~~~-~~~~~~G-----~~~~~~~~~~~~l~  218 (259)
T d2fr1a1         156 ---GYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--------PVA-DRFRRHG-----VIEMPPETACRALQ  218 (259)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------------CTTTT-----EECBCHHHHHHHHH
T ss_pred             ---HHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccc--------hHH-HHHHhcC-----CCCCCHHHHHHHHH
Confidence               133456666555443   489999999998877653211        111 1111111     34578999999999


Q ss_pred             HHhcCCCc
Q 018900          280 LAVENPEA  287 (349)
Q Consensus       280 ~~~~~~~~  287 (349)
                      .++..+..
T Consensus       219 ~~l~~~~~  226 (259)
T d2fr1a1         219 NALDRAEV  226 (259)
T ss_dssp             HHHHTTCS
T ss_pred             HHHhCCCc
Confidence            99988765

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.22  E-value=1.1e-11  Score=107.68  Aligned_cols=196  Identities=17%  Similarity=0.195  Sum_probs=121.5

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC-CCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHhhhc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~~~~  149 (349)
                      -||||    ||++.||+.++++|+++|++|++.+++. +..+++.       .++..  .++..+.+|   +++++++++
T Consensus         3 V~lIT----Gas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   71 (244)
T d1edoa_           3 VVVVT----GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-------KQIEAYGGQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             EEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             EEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-------HHHHHcCCcEEEEeCCCCCHHHHHHHHH
Confidence            58999    9999999999999999999999876544 2222111       11111  234455666   555555544


Q ss_pred             C----C-CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 G----V-TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ~----~-~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                      .    . ++|++||+|+.                    |+.    .++.++..+++.+-.++|++||...+-....    
T Consensus        72 ~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~----  147 (244)
T d1edoa_          72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG----  147 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----
T ss_pred             HHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC----
Confidence            2    2 48999999993                    233    3556666777777789999999764322111    


Q ss_pred             CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          201 EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                         ...|..+|.+++.+.       ..+|+++..+.||.+-.+.... +...+.+.+....|+.         -+...+|
T Consensus       148 ---~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~p~d  214 (244)
T d1edoa_         148 ---QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPLG---------RTGQPEN  214 (244)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCTTC---------SCBCHHH
T ss_pred             ---CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH-hhHHHHHHHHhcCCCC---------CCcCHHH
Confidence               111223455543332       2348999999999885432111 1223334444433321         2457899


Q ss_pred             HHHHHHHHhcCCC--ccCCCEEEeeCCC
Q 018900          274 LSSMLTLAVENPE--AASSNIFNLVSDR  299 (349)
Q Consensus       274 va~~~~~~~~~~~--~~~~~~~~i~~~~  299 (349)
                      +|++++.++..+.  -.+|+++.+.+|-
T Consensus       215 vA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         215 VAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            9999998864332  2467999998874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.19  E-value=3.8e-11  Score=105.15  Aligned_cols=198  Identities=17%  Similarity=0.191  Sum_probs=119.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceecC--CCeEEEcC---hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSA--GGKTVWGD---PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~~--~~~~~~~D---~~~l~~  146 (349)
                      .+|+||||    ||++.||++++++|+++|++|++..|..+.. ++.       ..++...  ++..+.+|   ++++++
T Consensus         5 ~GK~alIT----Gas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~D~~~~~~v~~   73 (259)
T d1ja9a_           5 AGKVALTT----GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV-------VAELKKLGAQGVAIQADISKPSEVVA   73 (259)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHH-------HHHHHHcCCCceEecCCCCCHHHHHH
Confidence            57899999    9999999999999999999999887655332 211       1122222  34456666   455554


Q ss_pred             hhc----CC-CccEEEeCCCC--------------------ChhhHHHHHH----HHHhCCCcEEEEecc-ccccCCCCC
Q 018900          147 VVG----GV-TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISS-AGIYKPADE  196 (349)
Q Consensus       147 ~~~----~~-~~d~Vi~~a~~--------------------~~~~~~~ll~----~a~~~gv~~~i~~Ss-~~vy~~~~~  196 (349)
                      +++    .. ++|++||++|.                    |+.+...+++    .+++.  .+++.++| .+.+.... 
T Consensus        74 ~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~-  150 (259)
T d1ja9a_          74 LFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIP-  150 (259)
T ss_dssp             HHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCC-
T ss_pred             HHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCC-
Confidence            443    22 38999999993                    2333334444    44433  35655555 33322111 


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCC------------CCCCchHHHHHHHHhCCCcc
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSG------------NNKDCEEWFFDRIVRKRPVP  257 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~------------~~~~~~~~~~~~~~~~~~~~  257 (349)
                            ....|..+|.+++.+.+       ..|+++..|.||++-.+.            ........+.+.+....|+.
T Consensus       151 ------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~  224 (259)
T d1ja9a_         151 ------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  224 (259)
T ss_dssp             ------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC
Confidence                  11122345655544433       248999999999985321            01112233344444444432


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                               .+...+|+|++++.++.+... .+|+++.+.+|.
T Consensus       225 ---------R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         225 ---------RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             ---------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ---------CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence                     245789999999999987654 467899998874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.19  E-value=1.2e-11  Score=109.49  Aligned_cols=198  Identities=14%  Similarity=0.189  Sum_probs=118.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|+||||    ||++.||++++++|+++|++|++++|+.+...++..       + ....+..+.+|   .++++++++
T Consensus         4 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~-------~-~~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           4 KGEAVLIT----GGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET-------D-HGDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------H-HGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------H-cCCCeeEEecccccHHHHHHHHH
Confidence            46899999    999999999999999999999999998765433211       1 12345566666   455555543


Q ss_pred             C----C-CccEEEeCCCC-------------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCC
Q 018900          150 G----V-TFDVVLDNNGK-------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (349)
Q Consensus       150 ~----~-~~d~Vi~~a~~-------------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~  195 (349)
                      .    . ++|++||+||.                         |+.+    ++.++..+++.+ .++|+++|...+-...
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~  150 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNG  150 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTS
T ss_pred             HHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCC
Confidence            2    2 38999999983                         1222    445555666555 5788888754322111


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHH----hh--CCcEEEEecCceeeCCCCCCc---------hHHHHHHHHhCCCcccCC
Q 018900          196 EPPHVEGDVVKPDAGHVQVEKYIS----EN--FSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       196 ~~~~~e~~~~~~~~~k~~~ek~~~----~~--~~~~~ilR~~~v~g~~~~~~~---------~~~~~~~~~~~~~~~~~~  260 (349)
                             ....|..+|.+++.+.+    |.  ++++..|.||.+--+......         ...+.+.+....|+-   
T Consensus       151 -------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg---  220 (276)
T d1bdba_         151 -------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG---  220 (276)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS---
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC---
Confidence                   01112234544333322    22  589999999988654322110         001122222222221   


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcC-C-CccCCCEEEeeCCC
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVEN-P-EAASSNIFNLVSDR  299 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~-~-~~~~~~~~~i~~~~  299 (349)
                            -+...+|+|.+++.++.. . .-.+|+++++.+|-
T Consensus       221 ------R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         221 ------RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             ------SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             ------CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence                  134678999999887753 2 33467999998873

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.19  E-value=1.6e-11  Score=108.33  Aligned_cols=210  Identities=15%  Similarity=0.174  Sum_probs=119.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||+.++++|+++|++|++.+|+.+..++.......  .......+..+.+|   +++++++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~--~~~~~~~~~~~~~Dvs~~~~v~~~~~   77 (272)
T d1xkqa_           4 SNKTVIIT----GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK--SGVSEKQVNSVVADVTTEDGQDQIIN   77 (272)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT--TTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCCCCceEEEEccCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987654432110000  00112235566676   555555554


Q ss_pred             CC-----CccEEEeCCCC------------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCC
Q 018900          150 GV-----TFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (349)
Q Consensus       150 ~~-----~~d~Vi~~a~~------------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~  196 (349)
                      ..     ++|++||+||.                        |+.+    ++.++..+++.+-..++.+|+.+.......
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~  157 (272)
T d1xkqa_          78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD  157 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS
T ss_pred             HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCC
Confidence            32     48999999983                        1223    344445555544334444454432211110


Q ss_pred             CCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCC----CC-chHHHHHHHHhCCCcccCCCCCc
Q 018900          197 PPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNN----KD-CEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       197 ~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                             ...|..+|.+++.+.       ..+|+++..|.||.+-.+...    .+ ....+.+....... .++-    
T Consensus       158 -------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pl----  225 (272)
T d1xkqa_         158 -------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE-CIPI----  225 (272)
T ss_dssp             -------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT-TCTT----
T ss_pred             -------cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhc-CCCC----
Confidence                   111223455443332       234899999999988544211    11 11111111111111 1110    


Q ss_pred             ceeeeeHHHHHHHHHHHhcCC-C-ccCCCEEEeeCCCcc
Q 018900          265 FTNIAHVRDLSSMLTLAVENP-E-AASSNIFNLVSDRAV  301 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~-~-~~~~~~~~i~~~~~~  301 (349)
                       .-+...+|+|++++.++.++ . -.+|+++.+.+|..+
T Consensus       226 -gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         226 -GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             -SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             -CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence             12457899999999998654 2 246799999988644

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.18  E-value=5.9e-11  Score=103.55  Aligned_cols=197  Identities=16%  Similarity=0.114  Sum_probs=118.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC----hhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D----~~~l~~~~  148 (349)
                      ++|+||||    ||++.||..++++|+++|++|+++.|+.+....+....    ......++.++.+|    .+++++++
T Consensus         4 ~gK~vlIT----Ggs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (254)
T d1sbya1           4 TNKNVIFV----AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK----AINPKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHH----HHCTTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHH----hhCCCCCEEEEEeecCCCHHHHHHHH
Confidence            57899999    99999999999999999999999998876543221000    01112244555555    22344333


Q ss_pred             c----CC-CccEEEeCCCC------------Chhh----HHHHHHHHHhC---CCcEEEEeccccccCCCCCCCCCCCCC
Q 018900          149 G----GV-TFDVVLDNNGK------------NLDA----VRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDV  204 (349)
Q Consensus       149 ~----~~-~~d~Vi~~a~~------------~~~~----~~~ll~~a~~~---gv~~~i~~Ss~~vy~~~~~~~~~e~~~  204 (349)
                      +    .. ++|++|++||.            |+.+    ++.++..+++.   +..++|++||...+.+...       .
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~-------~  148 (254)
T d1sbya1          76 KKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------V  148 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------S
T ss_pred             HHHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC-------C
Confidence            2    22 38999999993            4444    44444455443   2468999999665432111       1


Q ss_pred             CCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCC---CC--CchHHHHHHHHhCCCcccCCCCCcceeeeeHH
Q 018900          205 VKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGN---NK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR  272 (349)
Q Consensus       205 ~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  272 (349)
                      ..|..+|.++.-+       +..+|+++..|.||.+..+..   ..  .... .+.....            .+.....+
T Consensus       149 ~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~e  215 (254)
T d1sbya1         149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEP-RVAELLL------------SHPTQTSE  215 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCT-THHHHHT------------TSCCEEHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHH-HHHhccc------------cCCCCCHH
Confidence            1122345443322       233489999999999875410   00  0000 0111111            11234789


Q ss_pred             HHHHHHHHHhcCCCccCCCEEEeeCCC
Q 018900          273 DLSSMLTLAVENPEAASSNIFNLVSDR  299 (349)
Q Consensus       273 Dva~~~~~~~~~~~~~~~~~~~i~~~~  299 (349)
                      ++|++++.+++...  +|+++.+.+|+
T Consensus       216 ~va~~~~~~~~~~~--tG~vi~vdgG~  240 (254)
T d1sbya1         216 QCGQNFVKAIEANK--NGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHHHCC--TTCEEEEETTE
T ss_pred             HHHHHHHHhhhCCC--CCCEEEECCCE
Confidence            99999999887654  46899988874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.18  E-value=1.2e-11  Score=110.46  Aligned_cols=203  Identities=15%  Similarity=0.177  Sum_probs=119.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||+|.||++++++|+++|++|++++|+.+...+...    .+.......+..+.+|   .++++.++.
T Consensus        24 ~gK~alIT----Gas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~----~l~~~~g~~~~~~~~D~~~~~~v~~~~~   95 (294)
T d1w6ua_          24 QGKVAFIT----GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE----QISSQTGNKVHAIQCDVRDPDMVQNTVS   95 (294)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HHHHhcCCceEEEEecccChHHHHHHhh
Confidence            56999999    999999999999999999999999998754432110    0001112234556666   444444332


Q ss_pred             ----C-CCccEEEeCCCCC--------------------hhhH----HHHHHHH-HhCCCcEEEEeccccccCCCCCCCC
Q 018900          150 ----G-VTFDVVLDNNGKN--------------------LDAV----RPVADWA-KSSGVKQFLFISSAGIYKPADEPPH  199 (349)
Q Consensus       150 ----~-~~~d~Vi~~a~~~--------------------~~~~----~~ll~~a-~~~gv~~~i~~Ss~~vy~~~~~~~~  199 (349)
                          . .++|++||+++..                    ....    ...+... ...+...++.+++.........   
T Consensus        96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~---  172 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF---  172 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT---
T ss_pred             hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc---
Confidence                2 2489999999932                    1111    1222222 2234456777776543222111   


Q ss_pred             CCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCC--chHHHHHHHHhCCCcccCCCCCcceeeee
Q 018900          200 VEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAH  270 (349)
Q Consensus       200 ~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  270 (349)
                          ...|..+|.+++.+.+       ..|+++..|.||.+-.+.....  -.....+......|+.         -+..
T Consensus       173 ----~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~  239 (294)
T d1w6ua_         173 ----VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGT  239 (294)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBC
T ss_pred             ----cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCC
Confidence                1112335555444433       2489999999999966542211  1122344444444332         2456


Q ss_pred             HHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          271 VRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       271 v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+|+|+++..++.+... .+|+++.+.+|+
T Consensus       240 pediA~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         240 VEELANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence            89999999999976543 467999999885

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.18  E-value=4.3e-10  Score=96.86  Aligned_cols=184  Identities=13%  Similarity=0.153  Sum_probs=111.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-------hhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-------PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-------~~~l~  145 (349)
                      ++|+||||    ||+|.||+.++++|+++|++|.+++|.+.....         ....   ......+       ...+.
T Consensus         1 egK~vlIT----Gas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~   64 (236)
T d1dhra_           1 EARRVLVY----GGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------ASVI---VKMTDSFTEQADQVTAEVG   64 (236)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------EEEE---CCCCSCHHHHHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc---------ccce---eecccCcHHHHHHHHHHHH
Confidence            46899999    999999999999999999999999987643211         0000   0001111       23333


Q ss_pred             hhhcCCCccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG  202 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~  202 (349)
                      +.+...++|++||+||.                     |+.+..++.+++...  +-.++|++||...+.....      
T Consensus        65 ~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~------  138 (236)
T d1dhra_          65 KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG------  138 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------
T ss_pred             HHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC------
Confidence            44445468999999982                     233333333333221  2358999999765432211      


Q ss_pred             CCCCCCCChHHHHHHHHh---------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHH
Q 018900          203 DVVKPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD  273 (349)
Q Consensus       203 ~~~~~~~~k~~~ek~~~~---------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  273 (349)
                       ...|..+|.+++.+.+.         .|+++..+.||.+.-+         +.+......         ..-.++..+|
T Consensus       139 -~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~~---------~~~~~~~pe~  199 (236)
T d1dhra_         139 -MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---------MNRKSMPEA---------DFSSWTPLEF  199 (236)
T ss_dssp             -BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---------HHHHHSTTS---------CGGGSEEHHH
T ss_pred             -CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC---------cchhhCccc---------hhhcCCCHHH
Confidence             11223456555444432         2688999999998653         222222111         1124678899


Q ss_pred             HHHHHHHHhcCCCc-cCCCEEEeeC
Q 018900          274 LSSMLTLAVENPEA-ASSNIFNLVS  297 (349)
Q Consensus       274 va~~~~~~~~~~~~-~~~~~~~i~~  297 (349)
                      +++.+..++..... .+|.++.+.+
T Consensus       200 va~~~~~l~s~~~~~i~G~~i~v~~  224 (236)
T d1dhra_         200 LVETFHDWITGNKRPNSGSLIQVVT  224 (236)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             HHHHHHHHhCCCccCCCCCeEEEEE
Confidence            99999999987643 4567776643

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.1e-12  Score=109.38  Aligned_cols=190  Identities=14%  Similarity=0.102  Sum_probs=111.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec----CCCeEEEcC---hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGD---PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~D---~~~l  144 (349)
                      -++|.||||    ||++.||+++++.|+++|++|++.+|+.+..+++.       .++..    ..+..+.+|   ++++
T Consensus         8 lk~Kv~lIT----Gas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~-------~~l~~~~~~~~~~~~~~Dls~~~~v   76 (257)
T d1xg5a_           8 WRDRLALVT----GASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-------AECKSAGYPGTLIPYRCDLSNEEDI   76 (257)
T ss_dssp             GTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-------HHHHHTTCSSEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-------HHHHhcCCCceEEEEEccCCCHHHH
Confidence            457899999    99999999999999999999999999875544321       12221    134455666   5555


Q ss_pred             HhhhcCC-----CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCC--CcEEEEeccccccCC
Q 018900          145 GNVVGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKP  193 (349)
Q Consensus       145 ~~~~~~~-----~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~g--v~~~i~~Ss~~vy~~  193 (349)
                      +++++..     ++|++||+|+.                    |+.+    ++.++..+++.+  -.++|++||..-+..
T Consensus        77 ~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~  156 (257)
T d1xg5a_          77 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  156 (257)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence            5554322     38999999993                    2223    444555555554  469999999664321


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHH----H-----hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYI----S-----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ  264 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~----~-----~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (349)
                      .   |.  .....|..+|.+++-+.    .     ..++++..+-||.+-.+... .......+......+         
T Consensus       157 ~---p~--~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~-~~~~~~~~~~~~~~~---------  221 (257)
T d1xg5a_         157 L---PL--SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-KLHDKDPEKAAATYE---------  221 (257)
T ss_dssp             C---SC--GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH-HHTTTCHHHHHHHHC---------
T ss_pred             C---CC--cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh-hcChhhHHHHHhcCC---------
Confidence            1   10  01111223454543332    2     24788899999876432100 000000111111111         


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      ...++..+|+|++++.++.++..
T Consensus       222 ~~r~~~pedvA~~v~fL~s~~a~  244 (257)
T d1xg5a_         222 QMKCLKPEDVAEAVIYVLSTPAH  244 (257)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCTT
T ss_pred             CCCCcCHHHHHHHHHHHhCChhc
Confidence            12356899999999999987654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.15  E-value=6.2e-11  Score=102.52  Aligned_cols=176  Identities=15%  Similarity=0.128  Sum_probs=112.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCe-------EEEEEcCCCCcccCCCCCCCcccceecC--CCeEEEcC---hh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHE-------VTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWGD---PA  142 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~-------V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~D---~~  142 (349)
                      +-||||    ||++.||+.++++|.++|++       |...+|+.+..+++.       .++...  .+..+.+|   ++
T Consensus         2 ~VvlIT----Gas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~-------~~~~~~g~~~~~~~~Dvt~~~   70 (240)
T d2bd0a1           2 HILLIT----GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKIS-------LECRAEGALTDTITADISDMA   70 (240)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHH-------HHHHTTTCEEEEEECCTTSHH
T ss_pred             CEEEEc----cCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHH-------HHHHhcCCcEEEEEecCCCHH
Confidence            348999    99999999999999999987       888888875544321       122222  23455666   55


Q ss_pred             hHHhhhc----CC-CccEEEeCCCC--------------------Ch----hhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          143 EVGNVVG----GV-TFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       143 ~l~~~~~----~~-~~d~Vi~~a~~--------------------~~----~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +++++++    .. ++|++||+|+.                    |+    ..++.++..+++.+-.++|++||...+..
T Consensus        71 ~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~  150 (240)
T d2bd0a1          71 DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA  150 (240)
T ss_dssp             HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC
Confidence            5555443    22 38999999993                    23    33566677777777789999999765432


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..+       ...|..+|.+++-+.       .++|+++..+.||.+--+.....                   ......
T Consensus       151 ~~~-------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~-------------------~~~~~~  204 (240)
T d2bd0a1         151 FRH-------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-------------------DDEMQA  204 (240)
T ss_dssp             CTT-------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-------------------CSTTGG
T ss_pred             CCC-------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc-------------------CHhhHh
Confidence            211       111223454433332       23489999999998865432110                   011112


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEA  287 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~  287 (349)
                      .++..+|+|++++.++.++..
T Consensus       205 ~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         205 LMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             GSBCHHHHHHHHHHHHTSCTT
T ss_pred             cCCCHHHHHHHHHHHHcCCcc
Confidence            356789999999999987654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.15  E-value=1.4e-10  Score=100.92  Aligned_cols=192  Identities=13%  Similarity=0.159  Sum_probs=107.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~  147 (349)
                      ++|+||||    ||++.||++++++|+++|+  .|++..|+.+..+++.        +....++.++.+|   .++++++
T Consensus         2 ~~KtilIT----GassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~--------~~~~~~~~~~~~Dvs~~~~v~~~   69 (250)
T d1yo6a1           2 SPGSVVVT----GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK--------SIKDSRVHVLPLTVTCDKSLDTF   69 (250)
T ss_dssp             CCSEEEES----SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH--------TCCCTTEEEEECCTTCHHHHHHH
T ss_pred             cCCEEEEe----CCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH--------HhhCCceEEEEEecCCHHHHHHH
Confidence            35899999    9999999999999999995  6888899876655432        2233456677777   3444333


Q ss_pred             h-------cCCCccEEEeCCCC---------------------ChhhHHHH----HHHHHhCC-----------CcEEEE
Q 018900          148 V-------GGVTFDVVLDNNGK---------------------NLDAVRPV----ADWAKSSG-----------VKQFLF  184 (349)
Q Consensus       148 ~-------~~~~~d~Vi~~a~~---------------------~~~~~~~l----l~~a~~~g-----------v~~~i~  184 (349)
                      +       ....+|++||+||.                     |+.++..+    +..+++.+           ..+++.
T Consensus        70 ~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~  149 (250)
T d1yo6a1          70 VSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVIT  149 (250)
T ss_dssp             HHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEE
T ss_pred             HHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccc
Confidence            3       22248999999993                     23343333    33443321           246777


Q ss_pred             eccccccCCCCCCCCCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcc
Q 018900          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP  257 (349)
Q Consensus       185 ~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~  257 (349)
                      +|+...+-..............|..+|.++..+       +.+.|+++..+.||++--+...              .   
T Consensus       150 ~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~--------------~---  212 (250)
T d1yo6a1         150 ISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG--------------K---  212 (250)
T ss_dssp             ECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------
T ss_pred             cccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC--------------C---
Confidence            776543222111000000011123345443322       2344899999999987432110              0   


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                              ...+..++.++.++..+..... .+|+.|+. +++++.
T Consensus       213 --------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~~  249 (250)
T d1yo6a1         213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYE  249 (250)
T ss_dssp             --------------HHHHHHHHHHHTTCCGGGTTCEEET-TEEECC
T ss_pred             --------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeCC
Confidence                    1124678888888888876543 45566653 445443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.14  E-value=4.6e-10  Score=96.57  Aligned_cols=187  Identities=13%  Similarity=0.131  Sum_probs=108.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE---cChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~D~~~l~~~~~~  150 (349)
                      ..|||||    ||+|.||++++++|+++|++|++++|+++.....        .......+....   .+.+.+...++.
T Consensus         2 ~gkVlIT----Gas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVY----GGKGALGSAILEFFKKNGYTVLNIDLSANDQADS--------NILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE--------EEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCchhcccc--------cceeccccCchhHHHHHHHHHHHHhcC
Confidence            3579999    9999999999999999999999999987432110        000000010000   002333444444


Q ss_pred             CCccEEEeCCCC---------------------ChhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCC
Q 018900          151 VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (349)
Q Consensus       151 ~~~d~Vi~~a~~---------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  207 (349)
                      -++|++||+||.                     |+.++..+.+++...  +-.++|++||...+.....       ...|
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------~~~Y  142 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS-------MIGY  142 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT-------BHHH
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc-------ccch
Confidence            458999999983                     233333333333221  1258999999765432211       1123


Q ss_pred             CCChHHHHHHHHh----h-----CCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHH
Q 018900          208 DAGHVQVEKYISE----N-----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  278 (349)
Q Consensus       208 ~~~k~~~ek~~~~----~-----~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  278 (349)
                      ..+|.+++.+.+.    .     ++++..+.||.+--+         +.+....+.+         ...++..+|+++.+
T Consensus       143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---------~~~~~~~~~~---------~~~~~~~~~va~~~  204 (235)
T d1ooea_         143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---------MNRKWMPNAD---------HSSWTPLSFISEHL  204 (235)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---------HHHHHSTTCC---------GGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---------chhhhCcCCc---------cccCCCHHHHHHHH
Confidence            3456665555432    2     556777888876432         2333332221         23467899999998


Q ss_pred             HHHhcCCC--ccCCCEEEeeC
Q 018900          279 TLAVENPE--AASSNIFNLVS  297 (349)
Q Consensus       279 ~~~~~~~~--~~~~~~~~i~~  297 (349)
                      +..+..+.  ..+|..+.+.+
T Consensus       205 ~~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         205 LKWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHhcCccccCCCceEEEEEe
Confidence            87665543  24567777744

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=2.6e-10  Score=99.48  Aligned_cols=200  Identities=12%  Similarity=0.105  Sum_probs=119.7

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhh--
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAE--  143 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~--  143 (349)
                      ++|+||||    ||+|  .||+++++.|+++|++|++.+|+++.....        .++..  ........|   ..+  
T Consensus         4 ~gK~~lIT----Gass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~   71 (258)
T d1qsga_           4 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV--------EEFAAQLGSDIVLQCDVAEDASID   71 (258)
T ss_dssp             TTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH--------HHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHHHhhcCCcceeecccchHHHHH
Confidence            57899999    9999  789999999999999999999985432211        11111  122333333   222  


Q ss_pred             --HHhhhcCC-CccEEEeCCCCC-------------------------hhhHHHHHHHHHhC--CCcEEEEeccccccCC
Q 018900          144 --VGNVVGGV-TFDVVLDNNGKN-------------------------LDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (349)
Q Consensus       144 --l~~~~~~~-~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~  193 (349)
                        ........ .+|.+||+++..                         +.....+..++...  +-+.+|++||.+....
T Consensus        72 ~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          72 TMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA  151 (258)
T ss_dssp             HHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC
Confidence              23333333 389999998731                         12233344443332  2346888888653221


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHh-------hCCcEEEEecCceeeCCCCCC-chHHHHHHHHhCCCcccCCCCCcc
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQF  265 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~~-------~~~~~~ilR~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
                      ...       ...|..+|.+++.+.+.       +|+++..|+||.+..+..... .............|+.        
T Consensus       152 ~~~-------~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~--------  216 (258)
T d1qsga_         152 IPN-------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR--------  216 (258)
T ss_dssp             CTT-------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--------
T ss_pred             CCC-------cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC--------
Confidence            110       11123456665544433       379999999999976654332 2222333443333321        


Q ss_pred             eeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          266 TNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       266 ~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                       -+...+|+|.+++.++.+... .+|+++.+.+|..
T Consensus       217 -R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         217 -RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             -SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence             145689999999999976543 5679999998853

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.10  E-value=3.4e-10  Score=99.62  Aligned_cols=201  Identities=15%  Similarity=0.146  Sum_probs=117.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc-ccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      -++|++|||    ||++.||++++++|+++|++|++++|+.++. ++.       ..++..  ..+..+.+|   ++++.
T Consensus        16 L~gK~~lIT----Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~D~~~~~~v~   84 (272)
T d1g0oa_          16 LEGKVALVT----GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEV-------VAAIKKNGSDAACVKANVGVVEDIV   84 (272)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-------HHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHH-------HHHHHhhCCceeeEeCCCCCHHHHH
Confidence            357999999    9999999999999999999999999875322 111       111212  234455566   55555


Q ss_pred             hhhcCC-----CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEecccc-ccCCCCCC
Q 018900          146 NVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAG-IYKPADEP  197 (349)
Q Consensus       146 ~~~~~~-----~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~-vy~~~~~~  197 (349)
                      +.++..     ++|++||+++.                    |+.+...+.+++...  .-.+.++++|.. ..+...  
T Consensus        85 ~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~--  162 (272)
T d1g0oa_          85 RMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP--  162 (272)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS--
T ss_pred             HHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccccc--
Confidence            554322     37999999993                    334444444433221  124677776643 211111  


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCC----------CCC-chHHHH-HHHHhCCCccc
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGN----------NKD-CEEWFF-DRIVRKRPVPI  258 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~----------~~~-~~~~~~-~~~~~~~~~~~  258 (349)
                           ....+..+|.+++.+.+       .+|+++..|.||.+-.+..          ... ...... .......|+  
T Consensus       163 -----~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--  235 (272)
T d1g0oa_         163 -----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL--  235 (272)
T ss_dssp             -----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT--
T ss_pred             -----chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC--
Confidence                 11112235555544433       3489999999998854310          000 000111 111122222  


Q ss_pred             CCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          259 PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       259 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                             .-+...+|+|.+++.++.+... .+|+++.+.+|.
T Consensus       236 -------gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         236 -------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             -------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -------CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence                   1256789999999999976543 467999999885

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.2e-10  Score=99.35  Aligned_cols=195  Identities=13%  Similarity=0.158  Sum_probs=110.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~  148 (349)
                      -++|.+|||    ||++.||+.++++|+++|++|++++|+.+..++..       +++ .........|   .++++...
T Consensus         3 lkGKvalIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~l-~~~~~~~~~~~~~~~~~~~~~   70 (248)
T d2o23a1           3 VKGLVAVIT----GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA-------KKL-GNNCVFAPADVTSEKDVQTAL   70 (248)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH-------HHH-CTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHh-CCCcccccccccccccccccc
Confidence            368999999    99999999999999999999999999886654321       111 1122333333   22222222


Q ss_pred             c-----CCCccEEEeCCCC--------------------------ChhhHHHHHHHH----HhC------CCcEEEEecc
Q 018900          149 G-----GVTFDVVLDNNGK--------------------------NLDAVRPVADWA----KSS------GVKQFLFISS  187 (349)
Q Consensus       149 ~-----~~~~d~Vi~~a~~--------------------------~~~~~~~ll~~a----~~~------gv~~~i~~Ss  187 (349)
                      .     ....|.++++++.                          |+.++..+.+++    ...      +-.++|++||
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS  150 (248)
T d2o23a1          71 ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  150 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             cccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecc
Confidence            1     1235888876552                          233444444443    221      3458999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCC
Q 018900          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG  260 (349)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  260 (349)
                      ...+.....       ...|..+|.+++.+.+       .+|+++..+.||.+..+.... +...+.+.+....|+  .+
T Consensus       151 ~~~~~~~~~-------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl--~~  220 (248)
T d2o23a1         151 VAAFEGQVG-------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQVPF--PS  220 (248)
T ss_dssp             THHHHCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSS--SC
T ss_pred             hhhccCCCC-------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcCCC--CC
Confidence            765432111       1112335555444333       348999999999986553221 111222223222221  11


Q ss_pred             CCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          261 SGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       261 ~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                            -+...+|+|++++.++++. -.+|++.++
T Consensus       221 ------R~g~peevA~~v~fL~s~~-~itGq~I~v  248 (248)
T d2o23a1         221 ------RLGDPAEYAHLVQAIIENP-FLNGEVIRL  248 (248)
T ss_dssp             ------SCBCHHHHHHHHHHHHHCT-TCCSCEEEE
T ss_pred             ------CCcCHHHHHHHHHHHHhCC-CCCceEeEC
Confidence                  2457899999999988753 334577654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=7.7e-11  Score=102.11  Aligned_cols=177  Identities=11%  Similarity=0.089  Sum_probs=113.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHHh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVGN  146 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~~  146 (349)
                      -.+|.||||    ||++.||++++++|+++|++|++++|+.+..+++..       ++..  .++..+.+|   +++++.
T Consensus         5 l~Gkv~lIT----Gas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~-------~~~~~~~~~~~~~~Dvs~~~~v~~   73 (244)
T d1yb1a_           5 VTGEIVLIT----GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAA-------KCKGLGAKVHTFVVDCSNREDIYS   73 (244)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHHhcCCcEEEEEeeCCCHHHHHH
Confidence            357899999    999999999999999999999999998865543321       1211  235566676   555555


Q ss_pred             hhc----CC-CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCC
Q 018900          147 VVG----GV-TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (349)
Q Consensus       147 ~~~----~~-~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~  197 (349)
                      +++    .. .+|.+||++|.                    |+.    .++.++..+++.+-.++|++||...+..... 
T Consensus        74 ~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~-  152 (244)
T d1yb1a_          74 SAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF-  152 (244)
T ss_dssp             HHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH-
T ss_pred             HHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC-
Confidence            443    22 38999999993                    233    3556666777888889999999664322110 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHH----h------hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCccee
Q 018900          198 PHVEGDVVKPDAGHVQVEKYIS----E------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTN  267 (349)
Q Consensus       198 ~~~e~~~~~~~~~k~~~ek~~~----~------~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (349)
                            ...|..+|.++.-+.+    |      .|+++..+.||++--+.....             ..       ....
T Consensus       153 ------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-------------~~-------~~~~  206 (244)
T d1yb1a_         153 ------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------------ST-------SLGP  206 (244)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------------HH-------HHCC
T ss_pred             ------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-------------Cc-------cccC
Confidence                  1112234555333222    2      268899999998744322110             00       0112


Q ss_pred             eeeHHHHHHHHHHHhcCCC
Q 018900          268 IAHVRDLSSMLTLAVENPE  286 (349)
Q Consensus       268 ~i~v~Dva~~~~~~~~~~~  286 (349)
                      ++..+|+|+.++..+..+.
T Consensus       207 ~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         207 TLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             CCCHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHhcCC
Confidence            3567999999998887764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.01  E-value=3.8e-09  Score=91.45  Aligned_cols=147  Identities=15%  Similarity=0.178  Sum_probs=90.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHh---CCCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~  145 (349)
                      ||+||||    ||++.||+.++++|++   +|++|++.+|+++..+++.        ++.  ..++.++.+|   +++++
T Consensus         2 MKtilIT----Gas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~~~Dvs~~~~v~   69 (248)
T d1snya_           2 MNSILIT----GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE--------DLAKNHSNIHILEIDLRNFDAYD   69 (248)
T ss_dssp             CSEEEES----CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH--------HHHHHCTTEEEEECCTTCGGGHH
T ss_pred             cCEEEEe----CCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH--------HHHhcCCcEEEEEEEeccHHHHH
Confidence            6889999    9999999999999974   6999999999987664321        111  2356667777   45555


Q ss_pred             hhhc-------CCCccEEEeCCCC---------------------ChhhH----HHHHHHHHhC-----------CCcEE
Q 018900          146 NVVG-------GVTFDVVLDNNGK---------------------NLDAV----RPVADWAKSS-----------GVKQF  182 (349)
Q Consensus       146 ~~~~-------~~~~d~Vi~~a~~---------------------~~~~~----~~ll~~a~~~-----------gv~~~  182 (349)
                      ++++       ..++|++||+||.                     |+.+.    +.++..+++.           +..++
T Consensus        70 ~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~i  149 (248)
T d1snya_          70 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  149 (248)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccc
Confidence            4433       2348999999983                     23333    3334444432           34689


Q ss_pred             EEeccccccCCCCCCCCCCCCCCCCCCChHHHHHH-------HHhhCCcEEEEecCceeeC
Q 018900          183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-------ISENFSNWASFRPQYMIGS  236 (349)
Q Consensus       183 i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~-------~~~~~~~~~ilR~~~v~g~  236 (349)
                      |.++|..-  .....+.  .....|..+|.++..+       +.+.|+++..+.||++--+
T Consensus       150 i~i~S~~g--~~~~~~~--~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         150 INMSSILG--SIQGNTD--GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             EEECCGGG--CSTTCCS--CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             cccccccc--ccCCCCC--CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            99998542  1111110  0011122345443322       2334899999999987543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.00  E-value=4.2e-09  Score=90.37  Aligned_cols=188  Identities=16%  Similarity=0.113  Sum_probs=109.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhH----Hhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV----GNV  147 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l----~~~  147 (349)
                      |++|||    ||++.||++++++|+++|++|++++|+++..+                 .....+|   ....    ...
T Consensus         2 K~alIT----Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-----------------~~~~~~d~~~~~~~~~~~~~~   60 (241)
T d1uaya_           2 RSALVT----GGASGLGRAAALALKARGYRVVVLDLRREGED-----------------LIYVEGDVTREEDVRRAVARA   60 (241)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCCSSS-----------------SEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCccccc-----------------ceEeeccccchhhhHHHHHhh
Confidence            789999    99999999999999999999999999875432                 1223333   1111    222


Q ss_pred             hcCCCccEEEeCCCC------------------------ChhhHHHHH----HHH------HhCCCcEEEEeccccccCC
Q 018900          148 VGGVTFDVVLDNNGK------------------------NLDAVRPVA----DWA------KSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~------------------------~~~~~~~ll----~~a------~~~gv~~~i~~Ss~~vy~~  193 (349)
                      ......+.+++.++.                        |+.+...+.    ..+      ++.+..++|++||...+..
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  140 (241)
T d1uaya_          61 QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG  140 (241)
T ss_dssp             HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC
T ss_pred             hccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC
Confidence            222233455544431                        122222222    222      2223468999999764332


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcce
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ...       ...|..+|.+++.+.+       .+|+++..|.||.+..+.... .............++  .+      
T Consensus       141 ~~~-------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~--~~------  204 (241)
T d1uaya_         141 QIG-------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPF--PP------  204 (241)
T ss_dssp             CTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCCS--SC------
T ss_pred             CCC-------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch-hhhhHHHHHHhcCCC--CC------
Confidence            111       1112335555444332       348999999999986543221 112223333333322  11      


Q ss_pred             eeeeHHHHHHHHHHHhcCCCccCCCEEEeeCCCc
Q 018900          267 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  300 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~~~~  300 (349)
                      -+...+|+|++++.++.+. -.+|+++.+.+|..
T Consensus       205 R~g~pedvA~~v~fL~s~~-~iTG~~i~VDGG~~  237 (241)
T d1uaya_         205 RLGRPEEYAALVLHILENP-MLNGEVVRLDGALR  237 (241)
T ss_dssp             SCCCHHHHHHHHHHHHHCT-TCCSCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHHhCC-CCCCCEEEECCccc
Confidence            1346899999999998853 34569999988753

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=5.5e-10  Score=97.55  Aligned_cols=197  Identities=14%  Similarity=0.104  Sum_probs=114.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHh---CCCeEEEEEcCCCCcccCCCCCCCccccee----cCCCeEEEcC---h
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIV----SAGGKTVWGD---P  141 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~D---~  141 (349)
                      -++|.++||    ||++.||+.++++|.+   +|++|++++|+.+.++++.       .++.    ...+..+.+|   +
T Consensus         4 L~gKvalIT----Gas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~-------~~l~~~~~~~~~~~~~~Dvs~~   72 (259)
T d1oaaa_           4 LGCAVCVLT----GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK-------EELGAQQPDLKVVLAAADLGTE   72 (259)
T ss_dssp             CBSEEEEES----SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH-------HHHHHHCTTSEEEEEECCTTSH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH-------HHHHhhcCCceEEEEEccCCCH
Confidence            357889999    9999999999999975   7999999999876554322       1111    1234556676   5


Q ss_pred             hhHHhhhc---------CCCccEEEeCCCC-----------------------ChhhHHHHHHHH----HhCC--CcEEE
Q 018900          142 AEVGNVVG---------GVTFDVVLDNNGK-----------------------NLDAVRPVADWA----KSSG--VKQFL  183 (349)
Q Consensus       142 ~~l~~~~~---------~~~~d~Vi~~a~~-----------------------~~~~~~~ll~~a----~~~g--v~~~i  183 (349)
                      ++++++++         ...+|++|++++.                       |+.+...+.+++    ++.+  ..++|
T Consensus        73 ~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv  152 (259)
T d1oaaa_          73 AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVV  152 (259)
T ss_dssp             HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEE
T ss_pred             HHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccc
Confidence            55555542         1246899998872                       334444444444    3333  35899


Q ss_pred             EeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH-----hhCCcEEEEecCceeeCCCCCC----chHHHHHHHHhCC
Q 018900          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----ENFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKR  254 (349)
Q Consensus       184 ~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~-----~~~~~~~ilR~~~v~g~~~~~~----~~~~~~~~~~~~~  254 (349)
                      ++||...+.....       ...|..+|.+++.+.+     ..|+++..+.||.+-.+.....    ..+.....+....
T Consensus       153 ~isS~~~~~~~~~-------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T d1oaaa_         153 NISSLCALQPYKG-------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK  225 (259)
T ss_dssp             EECCGGGTSCCTT-------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             ccccccccCCCcc-------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC
Confidence            9999654332111       1112234555443332     2488999999998865321000    0000111111110


Q ss_pred             CcccCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEe
Q 018900          255 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  295 (349)
Q Consensus       255 ~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i  295 (349)
                      +   .      ..+...+|+|++++.++.+..-..|+.+++
T Consensus       226 ~---~------~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         226 S---D------GALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             H---T------TCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             C---C------CCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            0   0      123578999999999887654445566665

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.95  E-value=3.3e-09  Score=93.09  Aligned_cols=199  Identities=10%  Similarity=0.088  Sum_probs=115.1

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec--CCCeEEEcC---hhhHH
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~D---~~~l~  145 (349)
                      ++|++|||    ||+|  .||+.++++|+++|++|++++|+++..+.        ..++..  ....++..|   .++..
T Consensus         4 ~gK~alIT----Gaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~--------~~~l~~~~~~~~~~~~d~~~~~~~~   71 (274)
T d2pd4a1           4 KGKKGLIV----GVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKR--------VRPIAQELNSPYVYELDVSKEEHFK   71 (274)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHH--------HHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--------HHHHHhhCCceeEeeecccchhhHH
Confidence            57899999    9887  79999999999999999999998532211        111111  123344444   33333


Q ss_pred             hhh----cCC-CccEEEeCCCCC------------------------hhhHHHHHHHHHhC-CCc-EEEEeccccccCCC
Q 018900          146 NVV----GGV-TFDVVLDNNGKN------------------------LDAVRPVADWAKSS-GVK-QFLFISSAGIYKPA  194 (349)
Q Consensus       146 ~~~----~~~-~~d~Vi~~a~~~------------------------~~~~~~ll~~a~~~-gv~-~~i~~Ss~~vy~~~  194 (349)
                      +++    +.. ++|++||+++..                        ......+...+... +.. .++.+|+.+.....
T Consensus        72 ~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~  151 (274)
T d2pd4a1          72 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  151 (274)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc
Confidence            332    222 389999999831                        01122333333222 222 35555555543322


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCch-HHHHHHHHhCCCcccCCCCCcce
Q 018900          195 DEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFT  266 (349)
Q Consensus       195 ~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
                      ..       ...+..+|.+++.+.+       ..|+++..+.||.+.-+......- ...........++         .
T Consensus       152 ~~-------~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~  215 (274)
T d2pd4a1         152 AH-------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------R  215 (274)
T ss_dssp             TT-------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------S
T ss_pred             cc-------chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------c
Confidence            11       1112235655554433       248999999999887654332211 1222222222222         1


Q ss_pred             eeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          267 NIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       267 ~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      .+...+|+|.+++.++.+... .+|+++.+.+|.
T Consensus       216 r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         216 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            246789999999999987543 467999999885

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.6e-09  Score=94.51  Aligned_cols=199  Identities=15%  Similarity=0.087  Sum_probs=112.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEE---cCCCCcccCCCCCCCcccce--ecCCCeEEEcC---hhhHH
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT---VGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVG  145 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~---R~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~D---~~~l~  145 (349)
                      +|-||||    ||++.||+++++.|.++|.+|+.+.   |+.+...++..    ...++  ....+..+.+|   .+++.
T Consensus         2 kkVvlIT----GassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~Dv~~~~~~~   73 (285)
T d1jtva_           2 RTVVLIT----GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE----AARALACPPGSLETLQLDVRDSKSVA   73 (285)
T ss_dssp             CEEEEES----CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH----HHHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CCEEEEc----cCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHH----HHHHHhccCCceEEEeccccchHhhh
Confidence            4568999    9999999999999999998765554   43322211100    00111  12245556666   56666


Q ss_pred             hhhcCC---CccEEEeCCCC--------------------Chhh----HHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Q 018900          146 NVVGGV---TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (349)
Q Consensus       146 ~~~~~~---~~d~Vi~~a~~--------------------~~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~  198 (349)
                      +++...   .+|+++++++.                    |+.+    ++.++..+++.+-.++|++||....-....  
T Consensus        74 ~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~--  151 (285)
T d1jtva_          74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF--  151 (285)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT--
T ss_pred             hhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC--
Confidence            555433   48999999983                    3333    555566677777789999999654322110  


Q ss_pred             CCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCC--------------chHHHHHHHHhCCCcc
Q 018900          199 HVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKD--------------CEEWFFDRIVRKRPVP  257 (349)
Q Consensus       199 ~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~--------------~~~~~~~~~~~~~~~~  257 (349)
                           ...|..+|.+++.+.       ..+|+++..+.||.+--+.....              ....+.+.+...+.+.
T Consensus       152 -----~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T d1jtva_         152 -----NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF  226 (285)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh
Confidence                 011223455544333       23489999999998854432110              0001111111111110


Q ss_pred             cCCCCCcceeeeeHHHHHHHHHHHhcCCCccCCCEEEeeC
Q 018900          258 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  297 (349)
Q Consensus       258 ~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~i~~  297 (349)
                             .......+|+|++++.+++.+.+   +..++.+
T Consensus       227 -------~~~~~~PeeVA~~v~~~~~~~~p---~~ry~~g  256 (285)
T d1jtva_         227 -------REAAQNPEEVAEVFLTALRAPKP---TLRYFTT  256 (285)
T ss_dssp             -------HHHCBCHHHHHHHHHHHHHCSSC---CSEEESC
T ss_pred             -------cccCCCHHHHHHHHHHHHhCCCC---CeEEecH
Confidence                   01245689999999999998765   3344444

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.86  E-value=9.6e-09  Score=89.62  Aligned_cols=202  Identities=10%  Similarity=0.037  Sum_probs=112.0

Q ss_pred             cceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhh----
Q 018900           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAE----  143 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~----  143 (349)
                      ++|+||||    ||+|  .||++++++|.++|++|++..|+.++..+       +..+........+.+|   +++    
T Consensus         5 ~gK~~lIt----Gaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~-------~~~~~~~~~~~~~~~dv~~~~~~~~~   73 (268)
T d2h7ma1           5 DGKRILVS----GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ-------RITDRLPAKAPLLELDVQNEEHLASL   73 (268)
T ss_dssp             TTCEEEEC----CCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH-------HHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH-------HHHHHcCCceeeEeeecccccccccc
Confidence            57899999    9765  59999999999999999999998754321       1112222344556666   322    


Q ss_pred             ---HHhhhcCC-CccEEEeCCCCC-------------------------hhhHHHHHHHHHhCC-CcEEEEeccccccCC
Q 018900          144 ---VGNVVGGV-TFDVVLDNNGKN-------------------------LDAVRPVADWAKSSG-VKQFLFISSAGIYKP  193 (349)
Q Consensus       144 ---l~~~~~~~-~~d~Vi~~a~~~-------------------------~~~~~~ll~~a~~~g-v~~~i~~Ss~~vy~~  193 (349)
                         +.+.+... .+|+++|+++..                         ..........+.... ....+.+++......
T Consensus        74 ~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~  153 (268)
T d2h7ma1          74 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA  153 (268)
T ss_dssp             HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC
T ss_pred             cchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc
Confidence               33334333 389999999831                         011122222222221 233444444332221


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCC--------CCC---chHHHHHHHHhCCC
Q 018900          194 ADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGN--------NKD---CEEWFFDRIVRKRP  255 (349)
Q Consensus       194 ~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~--------~~~---~~~~~~~~~~~~~~  255 (349)
                      .   |    ....+..+|.+++.+.+       ..|+++..|.||.+-.+..        ...   ....+.+.+.+..|
T Consensus       154 ~---p----~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  226 (268)
T d2h7ma1         154 M---P----AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP  226 (268)
T ss_dssp             C---T----TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT
T ss_pred             C---c----ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCC
Confidence            1   1    01112234555444433       2389999999998754311        100   11122223333333


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +.        +.+...+|+|++++.++.+... .+|+++.+.+|..
T Consensus       227 l~--------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         227 IG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             TC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             CC--------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence            21        1234578999999999976543 4678999998864

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.80  E-value=1.5e-08  Score=87.82  Aligned_cols=197  Identities=14%  Similarity=0.144  Sum_probs=100.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC-C-
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-V-  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~-~-  151 (349)
                      ||.||||    ||++.||++++++|+++|++|++++|+.++...          ++...     .+......+.... . 
T Consensus         1 mkVvlIT----Gas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~----------d~~~~-----~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           1 MSIIVIS----GCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------DLSTA-----EGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTSH-----HHHHHHHHHHHTTCTT
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECChHHHHH----------HhcCH-----HHHHHHHHHHHHHhCC
Confidence            6789999    999999999999999999999999997643211          00000     0001112222222 2 


Q ss_pred             CccEEEeCCCCC-------------hhh----HHHHHHHHHhCCCcEEEEeccccccC-CCCCCCCC-------------
Q 018900          152 TFDVVLDNNGKN-------------LDA----VRPVADWAKSSGVKQFLFISSAGIYK-PADEPPHV-------------  200 (349)
Q Consensus       152 ~~d~Vi~~a~~~-------------~~~----~~~ll~~a~~~gv~~~i~~Ss~~vy~-~~~~~~~~-------------  200 (349)
                      .+|.++++|+..             ..+    .....+...+........+.+..... .....+..             
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s  141 (257)
T d1fjha_          62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEee
Confidence            379999999842             122    22233344444444555555432111 00000000             


Q ss_pred             -------CCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCCCchH-HHHHHHHhC-CCcccCCCCCc
Q 018900          201 -------EGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNKDCEE-WFFDRIVRK-RPVPIPGSGMQ  264 (349)
Q Consensus       201 -------e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~  264 (349)
                             ......|..+|.+++.+.       ..+|+++..|.||.+-.+......-. .+.+.+.+. .|+        
T Consensus       142 ~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl--------  213 (257)
T d1fjha_         142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM--------  213 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST--------
T ss_pred             ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC--------
Confidence                   000001123344433332       23489999999999866542221000 011111111 111        


Q ss_pred             ceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCC
Q 018900          265 FTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  298 (349)
Q Consensus       265 ~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~  298 (349)
                       .-+...+|+|++++.++.+... .+|+++.+.+|
T Consensus       214 -gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         214 -GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             -TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence             1245789999999999876644 46789999887

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.77  E-value=3.7e-08  Score=87.08  Aligned_cols=209  Identities=8%  Similarity=0.002  Sum_probs=112.3

Q ss_pred             ccceEEEEEecCCCccc--chHHHHHHHHHhCCCeEEEEEcCCCC-----------c--ccCCCC-CCC---cccceec-
Q 018900           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDEN-----------S--DKMKKP-PFN---RFNEIVS-  131 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG--~iG~~l~~~Ll~~g~~V~~l~R~~~~-----------~--~~~~~~-~~~---~~~~l~~-  131 (349)
                      -++|++|||    ||+|  .||+.++++|+++|.+|++.+|+...           .  ...... ...   +...+.. 
T Consensus         6 L~gK~alVT----Gass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           6 LRGKRAFIA----GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CTTCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            357899999    9887  89999999999999999999885310           0  000000 000   0000000 


Q ss_pred             -CCC-----------eEEEcChhhH----HhhhcCC-CccEEEeCCCC----------------------ChhhHHHHHH
Q 018900          132 -AGG-----------KTVWGDPAEV----GNVVGGV-TFDVVLDNNGK----------------------NLDAVRPVAD  172 (349)
Q Consensus       132 -~~~-----------~~~~~D~~~l----~~~~~~~-~~d~Vi~~a~~----------------------~~~~~~~ll~  172 (349)
                       ...           .+...|...+    +.+.+.. ++|++||+++.                      |+.+...+..
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence             000           0000111111    2222222 37999999983                      1223334444


Q ss_pred             HHHhCC--CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHH--------HHHhhCCcEEEEecCceeeCCCCCC-
Q 018900          173 WAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK--------YISENFSNWASFRPQYMIGSGNNKD-  241 (349)
Q Consensus       173 ~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek--------~~~~~~~~~~ilR~~~v~g~~~~~~-  241 (349)
                      ++....  -.+.+.+++.+.......      ....+..+|..++.        +..++|+++..|.||++..+..... 
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~  235 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPG------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTT------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             HHHHHhhcCCcceeeeehhhcccccc------cccceecccccccccccccchhccccceEEecccccccccchhhhhcc
Confidence            443321  124555555443221111      01112223433322        2234589999999999987765443 


Q ss_pred             chHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCC
Q 018900          242 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  299 (349)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~  299 (349)
                      ....+.+.+....|+-         .+...+|+|.+++.++.+... .+|+++.+.+|.
T Consensus       236 ~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         236 FIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            2334445554444432         235789999999999976544 467899998874

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=9.6e-09  Score=89.95  Aligned_cols=181  Identities=16%  Similarity=0.077  Sum_probs=106.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~  149 (349)
                      ++|++|||    ||++.||++++++|+++|++|++++|+.+..++....    ..+.....+..+.+|   .+.....+.
T Consensus        13 ~GK~alIT----GassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~   84 (269)
T d1xu9a_          13 QGKKVIVT----GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH----CLELGAASAHYIAGTMEDMTFAEQFVA   84 (269)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HhhhhcccchhhhhhhhhHHHHHHHHH
Confidence            57899999    9999999999999999999999999987655432110    001111223344455   222222221


Q ss_pred             ----CC-CccEEEeCCCC--------------------Chh----hHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCC
Q 018900          150 ----GV-TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (349)
Q Consensus       150 ----~~-~~d~Vi~~a~~--------------------~~~----~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~  200 (349)
                          .. .+|+++++++.                    |+.    .++.++..+++.+ .++|++||...+-....    
T Consensus        85 ~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~~~p~----  159 (269)
T d1xu9a_          85 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPM----  159 (269)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCTT----
T ss_pred             HHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcCCCCC----
Confidence                11 36999999883                    222    3455555565433 58999998664322111    


Q ss_pred             CCCCCCCCCChHHHHHHHH----h-----hCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCCcccCCCCCcceeeeeH
Q 018900          201 EGDVVKPDAGHVQVEKYIS----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHV  271 (349)
Q Consensus       201 e~~~~~~~~~k~~~ek~~~----~-----~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  271 (349)
                         ...|..+|.+++.+.+    |     .++++..+.||.+--+         +......+.+         ....+..
T Consensus       160 ---~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---------~~~~~~~~~~---------~~~~~~~  218 (269)
T d1xu9a_         160 ---VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---------TAMKAVSGIV---------HMQAAPK  218 (269)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---------HHHHHSCGGG---------GGGCBCH
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---------HHHHhccCCc---------cccCCCH
Confidence               1122235555443322    2     2578889999987432         2333322211         1223567


Q ss_pred             HHHHHHHHHHhcCCCc
Q 018900          272 RDLSSMLTLAVENPEA  287 (349)
Q Consensus       272 ~Dva~~~~~~~~~~~~  287 (349)
                      +++|+.++..+.....
T Consensus       219 e~~a~~i~~~~~~~~~  234 (269)
T d1xu9a_         219 EECALEIIKGGALRQE  234 (269)
T ss_dssp             HHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHhhcCCC
Confidence            8999999887766543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.74  E-value=4.3e-08  Score=85.19  Aligned_cols=199  Identities=14%  Similarity=0.121  Sum_probs=111.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc-CCCCCCCcccceecCCCeEEEcC-------hhhHHhh
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNEIVSAGGKTVWGD-------PAEVGNV  147 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~D-------~~~l~~~  147 (349)
                      ..|||    ||++.||+.++++|+++|++|++++|+.+...+ +..    .+..........+..|       .+.+.++
T Consensus         3 vAlVT----Gas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (266)
T d1mxha_           3 AAVIT----GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVA----ELNAARAGSAVLCKGDLSLSSSLLDCCEDI   74 (266)
T ss_dssp             EEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             EEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH----HHHhhcCCceEEEecccccchhHHHHHHHH
Confidence            47999    999999999999999999999999998654311 100    0011111122222222       2223332


Q ss_pred             h----cCC-CccEEEeCCCCCh-------------------------------hhHHHHHHHHHh---------CCCcEE
Q 018900          148 V----GGV-TFDVVLDNNGKNL-------------------------------DAVRPVADWAKS---------SGVKQF  182 (349)
Q Consensus       148 ~----~~~-~~d~Vi~~a~~~~-------------------------------~~~~~ll~~a~~---------~gv~~~  182 (349)
                      +    +.. ++|++||+||...                               ............         .....+
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          75 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence            2    221 3799999999321                               000111111111         122355


Q ss_pred             EEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHH-------hhCCcEEEEecCceeeCCCCCCchHHHHHHHHhCCC
Q 018900          183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP  255 (349)
Q Consensus       183 i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~-------~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~  255 (349)
                      +.+++........       ....+..+|.+++.+.+       ..|+++..|.||.+.-+...   ...+.+.+.+..+
T Consensus       155 ~~~~~~~~~~~~~-------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~~~~~~~~~~~~p  224 (266)
T d1mxha_         155 VNLCDAMTDLPLP-------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---PQETQEEYRRKVP  224 (266)
T ss_dssp             EEECCGGGGSCCT-------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---CHHHHHHHHTTCT
T ss_pred             hhhhhccccccCc-------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---CHHHHHHHHhcCC
Confidence            6666644322211       11112235666544432       34899999999998655432   2334455544433


Q ss_pred             cccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCc
Q 018900          256 VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  300 (349)
Q Consensus       256 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~  300 (349)
                      +   +     +-+...+|+|++++.++.+... .+|+++.+.+|..
T Consensus       225 l---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         225 L---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             T---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             C---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence            2   1     1234689999999999987654 4679999998853

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.73  E-value=5.5e-08  Score=85.37  Aligned_cols=207  Identities=11%  Similarity=0.051  Sum_probs=112.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC-cccCCCC----CCCccc---------ceecCCCeEEEc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKP----PFNRFN---------EIVSAGGKTVWG  139 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~-~~~~~~~----~~~~~~---------~l~~~~~~~~~~  139 (349)
                      +.-+|||    ||++.||+.++++|+++|++|++.+|..+. .+++...    ......         ......+....+
T Consensus         2 ~pVAlIT----Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   77 (284)
T d1e7wa_           2 VPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   77 (284)
T ss_dssp             CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence            3457999    999999999999999999999998876422 1111000    000000         000001111222


Q ss_pred             ---ChhhHHhhhcCC-----CccEEEeCCCCCh----------------------------------hhHHHHHHHH---
Q 018900          140 ---DPAEVGNVVGGV-----TFDVVLDNNGKNL----------------------------------DAVRPVADWA---  174 (349)
Q Consensus       140 ---D~~~l~~~~~~~-----~~d~Vi~~a~~~~----------------------------------~~~~~ll~~a---  174 (349)
                         |.++++++++..     ++|++||+||...                                  .+...+.+++   
T Consensus        78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  157 (284)
T d1e7wa_          78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  157 (284)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence               355555554321     4899999999420                                  0111111211   


Q ss_pred             -------HhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHH-------HhhCCcEEEEecCceeeCCCCC
Q 018900          175 -------KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-------SENFSNWASFRPQYMIGSGNNK  240 (349)
Q Consensus       175 -------~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~-------~~~~~~~~ilR~~~v~g~~~~~  240 (349)
                             ++.+..++|.+++.....+..+       ...|..+|.+++.+.       ..+|+++..|.||..-..   .
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~~~~~~-------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~---~  227 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTNQPLLG-------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV---D  227 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTT-------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG---G
T ss_pred             hhhhHHHhcCCCCcccccccccccCCccc-------eeeeccccccchhhhHHHHHHhCCcccccccccccccccc---c
Confidence                   1123457787877553222111       111233455544433       334899999999863221   1


Q ss_pred             CchHHHHHHHHhCCCcccCCCCCcceeeeeHHHHHHHHHHHhcCCCc-cCCCEEEeeCCCccC
Q 018900          241 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVT  302 (349)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~i~~~~~~t  302 (349)
                      .....+.+......++  .+      -+...+|+|++++.++.+... .+|+++.+.+|..++
T Consensus       228 ~~~~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         228 DMPPAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             GSCHHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCCHHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            2233445555444332  11      235789999999999976543 467999999986554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.55  E-value=1.4e-07  Score=84.69  Aligned_cols=35  Identities=20%  Similarity=0.199  Sum_probs=30.4

Q ss_pred             ceEEEEEecCCC--cccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           74 KKKVLIVNTNSG--GHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~G--gtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .|..|||    |  ++..||+.++++|.++|.+|.+..|..
T Consensus         2 ~kVAlIT----Gaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           2 EDICFIA----GIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             CcEEEEe----CCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            4678999    9  557999999999999999999987653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.1e-08  Score=88.00  Aligned_cols=105  Identities=17%  Similarity=0.181  Sum_probs=70.8

Q ss_pred             ceEE-EEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCccccee--cCCCeEEEcC---hhhHHh
Q 018900           74 KKKV-LIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (349)
Q Consensus        74 ~~~V-LVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~D---~~~l~~  146 (349)
                      +|+| |||    ||++.||..++++|+++ |+.|++.+|+.+..++..       .++.  ..++.++.+|   .+++++
T Consensus         2 g~rVAlVT----Gas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dvs~~~sv~~   70 (275)
T d1wmaa1           2 GIHVALVT----GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV-------QQLQAEGLSPRFHQLDIDDLQSIRA   70 (275)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH-------HHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCeEEEEC----CCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-------HHHHhcCCcEEEEEEecCCHHHHHH
Confidence            4566 899    99999999999999986 899999999876554321       1222  2245667777   444443


Q ss_pred             hhc----CC-CccEEEeCCCC--------------------ChhhHHHHHHHHHhC--CCcEEEEecccc
Q 018900          147 VVG----GV-TFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAG  189 (349)
Q Consensus       147 ~~~----~~-~~d~Vi~~a~~--------------------~~~~~~~ll~~a~~~--gv~~~i~~Ss~~  189 (349)
                      +++    .. ++|++||+||.                    |+.++..+.+++...  .-.|+|++||..
T Consensus        71 ~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          71 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             HHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence            332    22 48999999993                    445555555555321  125899999954

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.48  E-value=2.4e-08  Score=82.74  Aligned_cols=82  Identities=20%  Similarity=0.248  Sum_probs=60.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcChhhHHhhhc
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~l~~~~~  149 (349)
                      .-++|+||||    ||+|.||+.+++.|+++|++|++++|+.+..+++...    +.+... .-...+..|.+++++.+.
T Consensus        20 ~l~gK~vlIt----GasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~   91 (191)
T d1luaa1          20 SVKGKKAVVL----AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS----VNKRFKVNVTAAETADDASRAEAVK   91 (191)
T ss_dssp             CCTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHHTCCCEEEECCSHHHHHHHTT
T ss_pred             CCCCCEEEEE----CCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHH----HHhccchhhhhhhcccHHHHHHHhc
Confidence            3468999999    9999999999999999999999999997655432211    001010 112344556888988887


Q ss_pred             CCCccEEEeCCCC
Q 018900          150 GVTFDVVLDNNGK  162 (349)
Q Consensus       150 ~~~~d~Vi~~a~~  162 (349)
                      +.  |+|||+++.
T Consensus        92 ~i--Dilin~Ag~  102 (191)
T d1luaa1          92 GA--HFVFTAGAI  102 (191)
T ss_dssp             TC--SEEEECCCT
T ss_pred             Cc--CeeeecCcc
Confidence            75  999999985

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.18  E-value=2.3e-06  Score=65.97  Aligned_cols=90  Identities=20%  Similarity=0.352  Sum_probs=65.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceec-CCCeEEEcC---hhhHHhh-hc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV-VG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~D---~~~l~~~-~~  149 (349)
                      |+|+|+    |+ |.+|+.+++.|.++|++|++++++++...           .+.. .+..++.||   ++.+.++ +.
T Consensus         1 M~IvI~----G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~-----------~~~~~~~~~vi~Gd~~~~~~l~~~~i~   64 (132)
T d1lssa_           1 MYIIIA----GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-----------KASAEIDALVINGDCTKIKTLEDAGIE   64 (132)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-----------HHHHHCSSEEEESCTTSHHHHHHTTTT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHCCCCcceecCChhhhh-----------hhhhhhhhhhccCcccchhhhhhcChh
Confidence            689999    76 99999999999999999999999875443           2222 267888888   5556555 33


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +  .|+++-+...+ +...-+...++..+.+++|
T Consensus        65 ~--a~~vv~~t~~d-~~N~~~~~~~k~~~~~~iI   95 (132)
T d1lssa_          65 D--ADMYIAVTGKE-EVNLMSSLLAKSYGINKTI   95 (132)
T ss_dssp             T--CSEEEECCSCH-HHHHHHHHHHHHTTCCCEE
T ss_pred             h--hhhhcccCCcH-HHHHHHHHHHHHcCCceEE
Confidence            3  58888876644 3333445567888887776

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.08  E-value=6.3e-06  Score=63.43  Aligned_cols=91  Identities=22%  Similarity=0.302  Sum_probs=68.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhh-hcC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~-~~~  150 (349)
                      |+++|.    |+ |.+|+.+++.|.++|++|++++.+++..+.+           ...+..++.+|   ++.+.++ +.+
T Consensus         1 k~~iIi----G~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~-----------~~~~~~~~~gd~~~~~~l~~a~i~~   64 (134)
T d2hmva1           1 KQFAVI----GL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY-----------ASYATHAVIANATEENELLSLGIRN   64 (134)
T ss_dssp             CCEEEE----CC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT-----------TTTCSEEEECCTTCTTHHHHHTGGG
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH-----------HHhCCcceeeecccchhhhccCCcc
Confidence            578999    55 9999999999999999999999988655433           33456677777   5666665 444


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        .|.||-..+.+.....-+...++..+..++|
T Consensus        65 --a~~vi~~~~~~~~~~~~~~~~~~~~~~~~ii   95 (134)
T d2hmva1          65 --FEYVIVAIGANIQASTLTTLLLKELDIPNIW   95 (134)
T ss_dssp             --CSEEEECCCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred             --ccEEEEEcCchHHhHHHHHHHHHHcCCCcEE
Confidence              4888888887766666666677788877766

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.66  E-value=6.2e-05  Score=60.18  Aligned_cols=91  Identities=20%  Similarity=0.133  Sum_probs=59.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~~  150 (349)
                      .|+|||+    |+ |++|+.+++.|.++||+|++++|+.+...++....    .     .......   +.......+..
T Consensus         2 ~K~Ilii----Ga-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~-----~~~~~~~~~~~~~~~~~~i~~   67 (182)
T d1e5qa1           2 TKSVLML----GS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q-----HSTPISLDVNDDAALDAEVAK   67 (182)
T ss_dssp             CCEEEEE----CC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----T-----TEEEEECCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----c-----ccccccccccchhhhHhhhhc
Confidence            5899999    76 99999999999999999999999987665443221    0     1111111   24555666655


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      .  |.++.+...  .....+...+.+.+. +++
T Consensus        68 ~--~~~i~~~~~--~~~~~~~~~~~~~~~-~~~   95 (182)
T d1e5qa1          68 H--DLVISLIPY--TFHATVIKSAIRQKK-HVV   95 (182)
T ss_dssp             S--SEEEECSCG--GGHHHHHHHHHHHTC-EEE
T ss_pred             c--ceeEeeccc--hhhhHHHHHHHhhcc-cee
Confidence            4  777766543  233445555555553 444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00024  Score=55.08  Aligned_cols=87  Identities=14%  Similarity=0.237  Sum_probs=51.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-C---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-H---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      |+||.|+    ||||++|+.+++.|+++. |   +++.+.++........      +   ........  +..+.. .+.
T Consensus         1 MkkVaIv----GATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~------~---~~~~~~~~--~~~~~~-~~~   64 (146)
T d1t4ba1           1 MQNVGFI----GWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS------F---GGTTGTLQ--DAFDLE-ALK   64 (146)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG------G---GTCCCBCE--ETTCHH-HHH
T ss_pred             CcEEEEE----CCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc------c---cCCceeee--cccchh-hhh
Confidence            6799999    999999999999888763 2   6777766543222110      0   00111111  111111 234


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      +  +|+++.+++  -+..+.+...+.+.|.+
T Consensus        65 ~--~DivF~a~~--~~~s~~~~~~~~~~g~~   91 (146)
T d1t4ba1          65 A--LDIIVTCQG--GDYTNEIYPKLRESGWQ   91 (146)
T ss_dssp             T--CSEEEECSC--HHHHHHHHHHHHHTTCC
T ss_pred             c--CcEEEEecC--chHHHHhhHHHHhcCCC
Confidence            4  499999886  34456667777777753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.47  E-value=1.8e-05  Score=64.17  Aligned_cols=38  Identities=29%  Similarity=0.475  Sum_probs=34.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |||.|+    ||+|.+|+.|++.|++.||+|++.+|++++.+
T Consensus         1 Mki~vi----gGaG~iG~alA~~la~~G~~V~l~~R~~e~~~   38 (212)
T d1jaya_           1 MRVALL----GGTGNLGKGLALRLATLGHEIVVGSRREEKAE   38 (212)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred             CEEEEE----eCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            689999    99999999999999999999999999876554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.47  E-value=7.3e-05  Score=59.31  Aligned_cols=104  Identities=17%  Similarity=0.210  Sum_probs=68.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcc---cceecCCCeEE---EcChhhHHhh
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NEIVSAGGKTV---WGDPAEVGNV  147 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~---~~l~~~~~~~~---~~D~~~l~~~  147 (349)
                      |++|-|+     |.|.+|..+++.|++.||+|++.+|+++..+.+........   .+.. ...+++   ..+.+..+.+
T Consensus         1 M~kIg~I-----GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~-~~~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           1 MKQIAFI-----GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV-QGADVVISMLPASQHVEGL   74 (162)
T ss_dssp             CCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH-TSCSEEEECCSCHHHHHHH
T ss_pred             CCEEEEE-----EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhc-cccCeeeecccchhhHHHH
Confidence            6789999     79999999999999999999999998654433222211111   1111 111222   2233344433


Q ss_pred             hcCC--------CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          148 VGGV--------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       148 ~~~~--------~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                      +...        +-++||++...+.+.++.+.+.+++.|+ +|+-
T Consensus        75 ~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi-~~~d  118 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AMLD  118 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             HhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCC-cEEe
Confidence            3211        1378999999999999999999999887 5663

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.47  E-value=0.00013  Score=57.02  Aligned_cols=41  Identities=29%  Similarity=0.424  Sum_probs=36.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      ..+++||.|+    ||.|.+|+.+++.|.+.||+|++.+|.....
T Consensus         6 ~~~~~kI~iI----Gg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           6 NSDIHKIVIV----GGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             CTTCCCEEEE----TTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCCCCeEEEE----cCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            3467899999    9999999999999999999999999987443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=7.7e-05  Score=59.74  Aligned_cols=95  Identities=16%  Similarity=0.175  Sum_probs=62.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+.+|||+    ||+|-+|...++.+...|.+|+++++++++.+.           +...+.+.+..-.+.....-...+
T Consensus        27 ~g~~VlI~----ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-----------~~~lGa~~~i~~~~~~~~~~~~~g   91 (171)
T d1iz0a2          27 PGEKVLVQ----AAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-----------PLALGAEEAATYAEVPERAKAWGG   91 (171)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-----------HHHTTCSEEEEGGGHHHHHHHTTS
T ss_pred             CCCEEEEE----eccccchhhhhhhhccccccccccccccccccc-----------ccccccceeeehhhhhhhhhcccc
Confidence            56789999    999999999999999999999999987654432           222344433311222333444445


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +|+|+++.|.++   ...+++++..|  +++.++.
T Consensus        92 ~D~v~d~~G~~~---~~~~~~l~~~G--~~v~~G~  121 (171)
T d1iz0a2          92 LDLVLEVRGKEV---EESLGLLAHGG--RLVYIGA  121 (171)
T ss_dssp             EEEEEECSCTTH---HHHHTTEEEEE--EEEEC--
T ss_pred             ccccccccchhH---HHHHHHHhcCC--cEEEEeC
Confidence            899999988543   34455555444  7886653

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.37  E-value=5.6e-05  Score=61.16  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=70.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE--EcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV--WGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~D---~~~l~~~  147 (349)
                      ++.+|||+    ||+|-+|...++.....|.+|++++|++++.+.           +...+.+.+  ..|   .+.+.+.
T Consensus        29 ~G~~VlV~----ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~-----------~~~~Ga~~vi~~~~~~~~~~~~~~   93 (182)
T d1v3va2          29 GGETVLVS----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-----------LKQIGFDAAFNYKTVNSLEEALKK   93 (182)
T ss_dssp             SSCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-----------HHHTTCSEEEETTSCSCHHHHHHH
T ss_pred             CCCEEEEE----eCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH-----------HHhhhhhhhcccccccHHHHHHHH
Confidence            57899999    999999999999999999999999988754432           222233322  222   2344455


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCC
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~  194 (349)
                      .....+|+|+++.|.  +.....+++++..|  +++.++....|+..
T Consensus        94 ~~~~Gvd~v~D~vG~--~~~~~~~~~l~~~G--~~v~~G~~~~~~~~  136 (182)
T d1v3va2          94 ASPDGYDCYFDNVGG--EFLNTVLSQMKDFG--KIAICGAISVYNRM  136 (182)
T ss_dssp             HCTTCEEEEEESSCH--HHHHHHGGGEEEEE--EEEECCCGGGTTCT
T ss_pred             hhcCCCceeEEecCc--hhhhhhhhhccCCC--eEEeecceeecccc
Confidence            566669999999883  34555666665554  78877766655543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00053  Score=48.70  Aligned_cols=87  Identities=17%  Similarity=0.242  Sum_probs=60.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      -++|+|+|+    | -|-.|..+++.|.++|++|++.+.+.+....          +....++.+..+...  ...+.+ 
T Consensus         3 ~~~K~v~Vi----G-lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~~-   64 (93)
T d2jfga1           3 YQGKNVVII----G-LGLTGLSCVDFFLARGVTPRVMDTRMTPPGL----------DKLPEAVERHTGSLN--DEWLMA-   64 (93)
T ss_dssp             CTTCCEEEE----C-CSHHHHHHHHHHHHTTCCCEEEESSSSCTTG----------GGSCTTSCEEESBCC--HHHHHH-
T ss_pred             cCCCEEEEE----e-ECHHHHHHHHHHHHCCCEEEEeeCCcCchhH----------HHHhhccceeecccc--hhhhcc-
Confidence            467899999    5 4889999999999999999999986542211          111234445544421  122333 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                       +|.||-..|...+  ..++..|++.|+
T Consensus        65 -~d~vi~SPGi~~~--~~~~~~a~~~gi   89 (93)
T d2jfga1          65 -ADLIVASPGIALA--HPSLSAAADAGI   89 (93)
T ss_dssp             -CSEEEECTTSCTT--SHHHHHHHHTTC
T ss_pred             -CCEEEECCCCCCC--CHHHHHHHHcCC
Confidence             4999998886543  578888998887

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=3.9e-05  Score=61.60  Aligned_cols=95  Identities=13%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D---~~~l~~~  147 (349)
                      .+.+|||+    ||+|-+|...++.+...|.+|+++++++++.+.           +...+.+.+.  .|   .+.+.+.
T Consensus        28 ~g~~VlV~----Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~-----------~~~~Ga~~vi~~~~~~~~~~i~~~   92 (174)
T d1yb5a2          28 AGESVLVH----GASGGVGLAACQIARAYGLKILGTAGTEEGQKI-----------VLQNGAHEVFNHREVNYIDKIKKY   92 (174)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-----------HHHTTCSEEEETTSTTHHHHHHHH
T ss_pred             CCCEEEEE----eccccccccccccccccCccccccccccccccc-----------ccccCcccccccccccHHHHhhhh
Confidence            46789999    999999999999999999999999987643321           1122333222  12   2444555


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ..+..+|+|+++.+.  ....+.++.++..|  +++.++
T Consensus        93 t~~~g~d~v~d~~g~--~~~~~~~~~l~~~G--~iv~~G  127 (174)
T d1yb5a2          93 VGEKGIDIIIEMLAN--VNLSKDLSLLSHGG--RVIVVG  127 (174)
T ss_dssp             HCTTCEEEEEESCHH--HHHHHHHHHEEEEE--EEEECC
T ss_pred             hccCCceEEeecccH--HHHHHHHhccCCCC--EEEEEe
Confidence            566669999999883  34555566666544  788765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.33  E-value=5e-05  Score=61.36  Aligned_cols=97  Identities=18%  Similarity=0.226  Sum_probs=66.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D---~~~l~~~  147 (349)
                      .+.+|||+    ||+|-+|...++.+...|.+|+++++++++.+.++           ..+.+.+.  .|   .+.+.+.
T Consensus        25 ~g~~VlI~----ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-----------~~Ga~~vi~~~~~~~~~~v~~~   89 (183)
T d1pqwa_          25 PGERVLIH----SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-----------RLGVEYVGDSRSVDFADEILEL   89 (183)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----------TTCCSEEEETTCSTHHHHHHHH
T ss_pred             CCCEEEEE----CCCCCcccccchhhccccccceeeecccccccccc-----------cccccccccCCccCHHHHHHHH
Confidence            46799999    99999999999999889999999998765443222           22333222  22   3455555


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ..+.++|+|+++.+.  +.....+++++..|  ++|.++..
T Consensus        90 t~~~g~d~v~d~~g~--~~~~~~~~~l~~~G--~~v~~G~~  126 (183)
T d1pqwa_          90 TDGYGVDVVLNSLAG--EAIQRGVQILAPGG--RFIELGKK  126 (183)
T ss_dssp             TTTCCEEEEEECCCT--HHHHHHHHTEEEEE--EEEECSCG
T ss_pred             hCCCCEEEEEecccc--hHHHHHHHHhcCCC--EEEEEccC
Confidence            556679999999984  34455566665544  78877543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.31  E-value=0.00032  Score=54.32  Aligned_cols=96  Identities=19%  Similarity=0.217  Sum_probs=64.4

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCC---eEEEcChhhHHhhhcC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG---KTVWGDPAEVGNVVGG  150 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~D~~~l~~~~~~  150 (349)
                      ||.|+    ||+|.+|+.++..|..+|.  +++.++.++.....         .++.+...   ........+..+.+++
T Consensus         2 Kv~Ii----GA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a---------~Dl~~~~~~~~~~~~~~~~~~~~~~~~   68 (144)
T d1mlda1           2 KVAVL----GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA---------ADLSHIETRATVKGYLGPEQLPDCLKG   68 (144)
T ss_dssp             EEEEE----TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH---------HHHTTSSSSCEEEEEESGGGHHHHHTT
T ss_pred             eEEEE----CCCChHHHHHHHHHHhCCccceEEEEeccccchhh---------HHHhhhhhhcCCCeEEcCCChHHHhCC
Confidence            79999    9999999999999998885  78888876532211         11111110   0111235666677777


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEec
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .  |+||.++|.              |....+.+++.+++.+.+-+|.+-
T Consensus        69 a--DivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          69 C--DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             C--SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             C--CEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            6  999999883              456688888988888754444443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.24  E-value=0.00024  Score=56.04  Aligned_cols=103  Identities=21%  Similarity=0.223  Sum_probs=65.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCccc---ce-ecCCCeEE-EcChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EI-VSAGGKTV-WGDPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~---~l-~~~~~~~~-~~D~~~l~~~~~  149 (349)
                      |||-|+     |.|.+|..+++.|++.||+|++.+|+++..+++.........   +. ...++-+. ..|.+.+++++.
T Consensus         1 MkIgiI-----GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~   75 (161)
T d1vpda2           1 MKVGFI-----GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVAL   75 (161)
T ss_dssp             CEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CEEEEE-----ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHh
Confidence            579999     789999999999999999999999987655433222111111   11 11111111 124455554432


Q ss_pred             CC--------CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          150 GV--------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       150 ~~--------~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +.        +-+.||++.....+..+.+.+.+++.|+ +|+
T Consensus        76 ~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~-~~v  116 (161)
T d1vpda2          76 GENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGV-EML  116 (161)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             CCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC-cee
Confidence            11        2367888888888888888888888776 555

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.24  E-value=9.8e-05  Score=57.49  Aligned_cols=103  Identities=19%  Similarity=0.313  Sum_probs=65.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +..+||.|+    |+ |++|..++..|+.+|  .+|+.++++++........ .... ...........+|+++    +.
T Consensus         3 ~~~~KI~II----Ga-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~D-l~~a-~~~~~~~~~~~~d~~~----~~   71 (146)
T d1ez4a1           3 PNHQKVVLV----GD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALD-LEDA-QAFTAPKKIYSGEYSD----CK   71 (146)
T ss_dssp             TTBCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHGG-GGGSCCCEEEECCGGG----GT
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHH-Hhcc-ccccCCceEeeccHHH----hc
Confidence            356799999    85 999999999999987  5899999876433211000 0000 0111223455566654    34


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +.  |+||.++|.              |....+.+++.+++.+.+-++.+-|
T Consensus        72 ~a--divvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          72 DA--DLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             TC--SEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             cc--cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            44  999999883              4556778888888887555554443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00027  Score=55.67  Aligned_cols=37  Identities=22%  Similarity=0.207  Sum_probs=33.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |||+|+    |+ |.+|..++..|.+.||+|++++|..+...
T Consensus         1 MkI~Ii----Ga-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           1 MKITVL----GC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            789999    76 99999999999999999999999886554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00088  Score=55.71  Aligned_cols=61  Identities=18%  Similarity=0.103  Sum_probs=40.9

Q ss_pred             cccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-h----hhHHhhhcCCCccEEEeCC
Q 018900           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-P----AEVGNVVGGVTFDVVLDNN  160 (349)
Q Consensus        86 gtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~----~~l~~~~~~~~~d~Vi~~a  160 (349)
                      .||.+|.+|++++..+|++|+.+.-......              ..+++++... .    +.+.+.+..  .|++|+.|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------------p~~~~~~~~~t~~~m~~~~~~~~~~--~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------------PPFVKRVDVMTALEMEAAVNASVQQ--QNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------------CTTEEEEECCSHHHHHHHHHHHGGG--CSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhcccccCc--------------ccccccceehhhHHHHHHHHhhhcc--ceeEeeee
Confidence            3799999999999999999999987552111              1234444333 2    333344444  49999998


Q ss_pred             CC
Q 018900          161 GK  162 (349)
Q Consensus       161 ~~  162 (349)
                      ++
T Consensus        94 Av   95 (223)
T d1u7za_          94 AV   95 (223)
T ss_dssp             BC
T ss_pred             ch
Confidence            83

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.12  E-value=0.00014  Score=58.42  Aligned_cols=98  Identities=19%  Similarity=0.215  Sum_probs=63.5

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cC--hhhHHhhh
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GD--PAEVGNVV  148 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D--~~~l~~~~  148 (349)
                      ..+.+|||.    ||+|-+|...++-+...|.+|+++++++++.+...           ..+.+.+. -+  .++.....
T Consensus        30 ~~g~~VLI~----gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-----------~lGa~~vi~~~~~~~~~~~~~   94 (176)
T d1xa0a2          30 PERGPVLVT----GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-----------VLGAKEVLAREDVMAERIRPL   94 (176)
T ss_dssp             GGGCCEEES----STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-----------HTTCSEEEECC---------C
T ss_pred             CCCCEEEEE----eccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-----------hcccceeeecchhHHHHHHHh
Confidence            346789999    99999999999999999999999999876554222           12333222 11  22233344


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .+.++|+|+++.+-.  .....++.++..|  |++.++..
T Consensus        95 ~~~gvD~vid~vgg~--~~~~~l~~l~~~G--riv~~G~~  130 (176)
T d1xa0a2          95 DKQRWAAAVDPVGGR--TLATVLSRMRYGG--AVAVSGLT  130 (176)
T ss_dssp             CSCCEEEEEECSTTT--THHHHHHTEEEEE--EEEECSCC
T ss_pred             hccCcCEEEEcCCch--hHHHHHHHhCCCc--eEEEeecc
Confidence            555699999988743  2445555555544  88877754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=5.5e-05  Score=61.90  Aligned_cols=107  Identities=19%  Similarity=0.243  Sum_probs=68.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCe---------------EE
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---------------TV  137 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~  137 (349)
                      +-+||.|+    | +|.+|+.++..++..||+|++++++++..++........+..+...+..               -+
T Consensus         3 ~IkkvaVi----G-aG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i   77 (192)
T d1f0ya2           3 IVKHVTVI----G-GGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTI   77 (192)
T ss_dssp             CCCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred             eeEEEEEE----C-cCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhc
Confidence            45799999    5 5999999999999999999999998754432111000001111100100               00


Q ss_pred             EcChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       138 ~~D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      . -..++.+++.++  |.|+-+...|++.-+.++..+.+.-...-|+.|+
T Consensus        78 ~-~~~d~~~a~~~a--d~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasn  124 (192)
T d1f0ya2          78 A-TSTDAASVVHST--DLVVEAIVENLKVKNELFKRLDKFAAEHTIFASN  124 (192)
T ss_dssp             E-EESCHHHHTTSC--SEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred             c-ccchhHhhhccc--ceehhhcccchhHHHHHHHHHhhhcccCceeecc
Confidence            0 013345566665  9999999999999999998887764444555554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.99  E-value=0.00057  Score=53.90  Aligned_cols=79  Identities=16%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCC-eEEEcChhhHHhhhcCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D~~~l~~~~~~~~~  153 (349)
                      |||.|+     |.|.+|..+++.|.+.||+|++.+|+++..++..           ..++ .....+.    +.+++.  
T Consensus         1 MkI~iI-----G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-----------~~~~~~~~~~~~----~~~~~~--   58 (165)
T d2f1ka2           1 MKIGVV-----GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLVDEAGQDL----SLLQTA--   58 (165)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSCSEEESCG----GGGTTC--
T ss_pred             CEEEEE-----eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-----------Hhhccceeeeec----cccccc--
Confidence            689999     5699999999999999999999999865443211           1111 1112222    234444  


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhC
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKSS  177 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~~  177 (349)
                      |+||-+..  ...+..+++.....
T Consensus        59 DiIilavp--~~~~~~vl~~l~~~   80 (165)
T d2f1ka2          59 KIIFLCTP--IQLILPTLEKLIPH   80 (165)
T ss_dssp             SEEEECSC--HHHHHHHHHHHGGG
T ss_pred             ccccccCc--Hhhhhhhhhhhhhh
Confidence            98886553  45677777766554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.90  E-value=0.00068  Score=53.30  Aligned_cols=89  Identities=22%  Similarity=0.280  Sum_probs=62.2

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ...+++|||+    |+ |-+|+.+++.|.+.|. +|++..|+.+...++..          ..+.+  ..+.+++.+.+.
T Consensus        21 ~l~~~~ilvi----Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~----------~~~~~--~~~~~~~~~~l~   83 (159)
T d1gpja2          21 SLHDKTVLVV----GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR----------DLGGE--AVRFDELVDHLA   83 (159)
T ss_dssp             CCTTCEEEEE----SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----------HHTCE--ECCGGGHHHHHH
T ss_pred             CcccCeEEEE----CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH----------hhhcc--cccchhHHHHhc
Confidence            3468899999    76 9999999999999997 69999998755532211          11222  336778888887


Q ss_pred             CCCccEEEeCCCCC--hhhHHHHHHHHHhCC
Q 018900          150 GVTFDVVLDNNGKN--LDAVRPVADWAKSSG  178 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~--~~~~~~ll~~a~~~g  178 (349)
                      ++  |+||.+.+.+  +..-..+-..++...
T Consensus        84 ~~--Divi~atss~~~ii~~~~i~~~~~~r~  112 (159)
T d1gpja2          84 RS--DVVVSATAAPHPVIHVDDVREALRKRD  112 (159)
T ss_dssp             TC--SEEEECCSSSSCCBCHHHHHHHHHHCS
T ss_pred             cC--CEEEEecCCCCccccHhhhHHHHHhcc
Confidence            76  9999998743  344444445555543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.84  E-value=0.00033  Score=56.13  Aligned_cols=101  Identities=16%  Similarity=0.101  Sum_probs=61.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~  150 (349)
                      .|||.|+    | .|.+|..++..|.+.||+|++++|+++..+.+.....   .....++.+.....   ..++.+.+++
T Consensus         1 sk~iaIi----G-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~~~~   72 (184)
T d1bg6a2           1 SKTYAVL----G-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA---IIAEGPGLAGTAHPDLLTSDIGLAVKD   72 (184)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS---EEEESSSCCEEECCSEEESCHHHHHTT
T ss_pred             CCEEEEE----C-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC---CchhhhhhhhhhhhhhhhhhhHhHhcC
Confidence            3789999    5 5999999999999999999999998654433211100   00001111111111   2446677777


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhC-CCcEEEEec
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i~~S  186 (349)
                      .  |+||-+..  ......+++.++.. .-..+|.++
T Consensus        73 a--D~iii~v~--~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          73 A--DVILIVVP--AIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             C--SEEEECSC--GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             C--CEEEEEEc--hhHHHHHHHHhhhccCCCCEEEEe
Confidence            6  99998654  44567777777654 223444433

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.83  E-value=0.0038  Score=47.94  Aligned_cols=92  Identities=16%  Similarity=0.195  Sum_probs=53.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      +++|.|+    |||||+|+.+++.|.+++|   ++..+.........+           ....-+....+.+.  ..+.+
T Consensus         2 ~mnVaIv----GATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i-----------~~~~~~~~~~~~~~--~~~~~   64 (144)
T d2hjsa1           2 PLNVAVV----GATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM-----------GFAESSLRVGDVDS--FDFSS   64 (144)
T ss_dssp             CCCEEEE----TTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE-----------EETTEEEECEEGGG--CCGGG
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce-----------eeccccchhccchh--hhhcc
Confidence            5789999    9999999999999976654   677666544322211           10011111112111  11223


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                        .|+++.+++  -.....+...+.+.|. ++|=.|+
T Consensus        65 --~d~vf~a~p--~~~s~~~~~~~~~~g~-~VID~Ss   96 (144)
T d2hjsa1          65 --VGLAFFAAA--AEVSRAHAERARAAGC-SVIDLSG   96 (144)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTC-EEEETTC
T ss_pred             --ceEEEecCC--cchhhhhccccccCCc-eEEeech
Confidence              488887776  3345556666666675 6776666

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.0018  Score=50.24  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=63.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC---hhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D---~~~l~~~~~~~  151 (349)
                      -+|+|.    | -|-+|..+++.|.++|++|++++.+++....       ...+....++.++.||   ++.|.++--+ 
T Consensus         4 nHiII~----G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~-------~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~-   70 (153)
T d1id1a_           4 DHFIVC----G-HSILAINTILQLNQRGQNVTVISNLPEDDIK-------QLEQRLGDNADVIPGDSNDSSVLKKAGID-   70 (153)
T ss_dssp             SCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHH-------HHHHHHCTTCEEEESCTTSHHHHHHHTTT-
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHcCCCEEEEeccchhHHH-------HHHHhhcCCcEEEEccCcchHHHHHhccc-
Confidence            369999    5 5999999999999999999999987643211       1223445688999998   4555554322 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhC-CCcEEE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~-gv~~~i  183 (349)
                      +.|+||-+...+.. ...++..+++. +..++|
T Consensus        71 ~a~~vi~~~~~d~~-n~~~~~~~r~~~~~~~ii  102 (153)
T d1id1a_          71 RCRAILALSDNDAD-NAFVVLSAKDMSSDVKTV  102 (153)
T ss_dssp             TCSEEEECSSCHHH-HHHHHHHHHHHTSSSCEE
T ss_pred             cCCEEEEccccHHH-HHHHHHHHHHhCCCCceE
Confidence            25889888775533 33444455554 444555

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.79  E-value=0.0042  Score=47.80  Aligned_cols=92  Identities=16%  Similarity=0.165  Sum_probs=53.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC-C---eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cChhhHHhhhc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-H---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVG  149 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~---~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~l~~~~~  149 (349)
                      |||.|+    |||||+|+.+++.|+++. |   ++..+..+..... ...        .......... .|.    ..+.
T Consensus         1 mKVaIi----GATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk-~~~--------~~~~~~~~~~~~~~----~~~~   63 (147)
T d1mb4a1           1 MRVGLV----GWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP-APN--------FGKDAGMLHDAFDI----ESLK   63 (147)
T ss_dssp             CEEEEE----SCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB-CCC--------SSSCCCBCEETTCH----HHHT
T ss_pred             CEEEEE----CCccHHHHHHHHHHHhcCCCCceEEEEecccccccc-ccc--------cCCcceeeecccch----hhhc
Confidence            679999    999999999999988753 3   5665554432211 110        0001111111 122    2244


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCc-EEEEecc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~-~~i~~Ss  187 (349)
                      +  .|+|+.+....  ....+...+.+.|.+ .+|=.|+
T Consensus        64 ~--~DvvF~alp~~--~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          64 Q--LDAVITCQGGS--YTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             T--CSEEEECSCHH--HHHHHHHHHHHTTCCSEEEESSS
T ss_pred             c--ccEEEEecCch--HHHHHhHHHHHcCCceEEEeCCc
Confidence            4  49999988744  355677777777864 4565565

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.78  E-value=0.0017  Score=51.90  Aligned_cols=100  Identities=17%  Similarity=0.168  Sum_probs=53.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEE-cCCCC-cccCCCCCCCcccceec-CCCeEEEcChhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDEN-SDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~-R~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~D~~~l~~~~~  149 (349)
                      |+||.|+    |||||+|..+++.|.++ .+++..+. +..+. ..+...   .....+.. ......  +.++......
T Consensus         1 MikVaIi----GATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~   71 (179)
T d2g17a1           1 MLNTLIV----GASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLIS---DLHPQLKGIVDLPLQ--PMSDVRDFSA   71 (179)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHH---HHCGGGTTTCCCBEE--EESCGGGTCT
T ss_pred             CcEEEEE----CcccHHHHHHHHHHHhCCCCceEeeEeeccccccccccc---ccccccccccccccc--cchhhhhhhc
Confidence            7899999    99999999999999987 45776654 32211 111000   00001100 011111  1122222333


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      +  +|+|+.+...  .....++....+.++ ++|=.|+
T Consensus        72 ~--~dvvf~alp~--~~s~~~~~~~~~~~~-~vIDlSa  104 (179)
T d2g17a1          72 D--VDVVFLATAH--EVSHDLAPQFLQAGC-VVFDLSG  104 (179)
T ss_dssp             T--CCEEEECSCH--HHHHHHHHHHHHTTC-EEEECSS
T ss_pred             c--cceeeccccc--hhHHHHhhhhhhcCc-eeecccc
Confidence            3  5988888763  233345555556664 6777775

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.78  E-value=0.0003  Score=57.71  Aligned_cols=37  Identities=30%  Similarity=0.360  Sum_probs=33.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |||.|+     |.||+|..++..|.+.||+|++++.+++..+
T Consensus         1 MkI~Vi-----GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~   37 (202)
T d1mv8a2           1 MRISIF-----GLGYVGAVCAGCLSARGHEVIGVDVSSTKID   37 (202)
T ss_dssp             CEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CEEEEE-----CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            689999     8999999999999999999999998765443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.00017  Score=57.94  Aligned_cols=96  Identities=15%  Similarity=0.219  Sum_probs=65.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D---~~~l~~~  147 (349)
                      .+.+|||+    ||+|-+|..+++.+...|.+|+++++++++.+.+           ...+.+.+.  .|   .+.+.++
T Consensus        28 ~g~~Vlv~----ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~-----------~~lGa~~vi~~~~~d~~~~v~~~   92 (179)
T d1qora2          28 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-----------LKAGAWQVINYREEDLVERLKEI   92 (179)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-----------HHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----ccccccchHHHHHHHHhCCeEeecccchHHHHHH-----------HhcCCeEEEECCCCCHHHHHHHH
Confidence            36799999    9999999999999999999999999987654322           222333222  22   2445555


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      -.+..+|+|+++.+..  .....++.++..|  +++.++.
T Consensus        93 t~g~g~d~v~d~~g~~--~~~~~~~~l~~~G--~~v~~g~  128 (179)
T d1qora2          93 TGGKKVRVVYDSVGRD--TWERSLDCLQRRG--LMVSFGN  128 (179)
T ss_dssp             TTTCCEEEEEECSCGG--GHHHHHHTEEEEE--EEEECCC
T ss_pred             hCCCCeEEEEeCccHH--HHHHHHHHHhcCC--eeeeccc
Confidence            5566689999998854  3445555555544  6765543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.76  E-value=0.0028  Score=48.80  Aligned_cols=97  Identities=16%  Similarity=0.181  Sum_probs=61.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCC--cccCCCCCCCccccee------cCCCeEEEcChhhH
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDEN--SDKMKKPPFNRFNEIV------SAGGKTVWGDPAEV  144 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~--~~~~~~~~~~~~~~l~------~~~~~~~~~D~~~l  144 (349)
                      |||.|+    ||+|.+|..++..|+.+|  .++..++++++.  .+..       ..++.      ..+.+....-.+++
T Consensus         1 MKV~Ii----GA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~-------a~Dl~~~~~~~~~~~~~~~~~~~d~   69 (145)
T d1hyea1           1 MKVTII----GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGL-------REDIYDALAGTRSDANIYVESDENL   69 (145)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHH-------HHHHHHHHTTSCCCCEEEEEETTCG
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcc-------cccchhcccccccCCccccCCcchH
Confidence            689999    999999999999999998  489999987521  1100       00111      11233322211222


Q ss_pred             HhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEe
Q 018900          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                       +.+++.  |+||-+||.              |..-.+.+++.+++.+-+.++.+
T Consensus        70 -~~l~~a--DvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          70 -RIIDES--DVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             -GGGTTC--SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             -HHhccc--eEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence             345555  999999983              44557777777777765555544

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.67  E-value=0.0026  Score=50.68  Aligned_cols=35  Identities=17%  Similarity=0.245  Sum_probs=28.8

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~  112 (349)
                      |+||.|+    |||||+|..+++.|.+.. .++..+.-+.
T Consensus         1 MikVaIv----GATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           1 MIRAGII----GATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             CEEEEEE----STTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            6899999    999999999999998864 4777775443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.65  E-value=0.0032  Score=49.42  Aligned_cols=95  Identities=15%  Similarity=0.164  Sum_probs=58.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEE-cCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ..+||.|.    |++|.+|+.+++.+.+. +.++++.. |.......   .....+......++.+ .   .+++.++..
T Consensus         3 s~ikI~i~----Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g---~d~~~~~~~~~~~~~~-~---~~~~~~~~~   71 (162)
T d1diha1           3 ANIRVAIA----GAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG---SDAGELAGAGKTGVTV-Q---SSLDAVKDD   71 (162)
T ss_dssp             CBEEEEET----TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS---CCTTCSSSSSCCSCCE-E---SCSTTTTTS
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecccchhcc---chhhhhhccccCCcee-e---ccHHHHhcc
Confidence            46799999    99999999999998876 67766554 33211110   0000111111112222 1   233444444


Q ss_pred             CCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       151 ~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        +|+||.+.-  .+.+...+++|.+.++ .+|
T Consensus        72 --~DViIDFs~--p~~~~~~~~~a~~~~~-~~V   99 (162)
T d1diha1          72 --FDVFIDFTR--PEGTLNHLAFCRQHGK-GMV   99 (162)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTC-EEE
T ss_pred             --cceEEEecc--HHHHHHHHHHHHhccc-eeE
Confidence              599999976  4778899999999987 444

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0011  Score=48.60  Aligned_cols=85  Identities=14%  Similarity=0.098  Sum_probs=55.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc---ChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---D~~~l~~~~~  149 (349)
                      ...||.|.     |.|.+|+-++.+..+.|++|++++.+++....          .+   .-+.+.+   |.+.+.++..
T Consensus        10 ~~~kigIl-----GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~v---a~~~i~~~~~d~~~l~~~~~   71 (111)
T d1kjqa2          10 AATRVMLL-----GSGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HV---AHRSHVINMLDGDALRRVVE   71 (111)
T ss_dssp             TCCEEEEE-----SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GG---SSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE-----eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hc---CCeEEECCCCCHHHHHHHHH
Confidence            34589999     59999999999999999999999998765432          11   1123444   4566666665


Q ss_pred             CCCccEEEeCCC-CChhhHHHHHHHHHhCCC
Q 018900          150 GVTFDVVLDNNG-KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       150 ~~~~d~Vi~~a~-~~~~~~~~ll~~a~~~gv  179 (349)
                      .+++|+|..-.. ++.    ..++.+.+.|+
T Consensus        72 ~~~~DviT~E~EnI~~----~~L~~le~~g~   98 (111)
T d1kjqa2          72 LEKPHYIVPEIEAIAT----DMLIQLEEEGL   98 (111)
T ss_dssp             HHCCSEEEECSSCSCH----HHHHHHHHTTC
T ss_pred             hhCCceEEEEecCcCH----HHHHHHHHCCC
Confidence            555788864332 333    33444444443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.00025  Score=56.94  Aligned_cols=97  Identities=14%  Similarity=0.161  Sum_probs=63.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-cChhhHHhhhcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~D~~~l~~~~~~~  151 (349)
                      .+.+|||+    ||+|-+|...++.+...|.+|++++|++++.+.           +...+.+.+. -+.++..+.+...
T Consensus        31 ~~~~vlV~----gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~-----------~~~lGad~vi~~~~~~~~~~l~~~   95 (177)
T d1o89a2          31 QDGEIVVT----GASGGVGSTAVALLHKLGYQVVAVSGRESTHEY-----------LKSLGASRVLPRDEFAESRPLEKQ   95 (177)
T ss_dssp             GGCEEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH-----------HHHHTEEEEEEGGGSSSCCSSCCC
T ss_pred             CCCcEEEE----EccccchHHHHHHHHHcCCCeEEEecchhHHHH-----------HHhhccccccccccHHHHHHHHhh
Confidence            34579999    999999999999999999999999998765432           2222333332 1233334445555


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      .+|.|+++.+-.  .....++.++..|  |+|.++..
T Consensus        96 ~~~~vvD~Vgg~--~~~~~l~~l~~~G--riv~~G~~  128 (177)
T d1o89a2          96 VWAGAIDTVGDK--VLAKVLAQMNYGG--CVAACGLA  128 (177)
T ss_dssp             CEEEEEESSCHH--HHHHHHHTEEEEE--EEEECCCT
T ss_pred             cCCeeEEEcchH--HHHHHHHHhcccc--ceEeeccc
Confidence            589999887732  2334444444433  78866643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.58  E-value=0.00025  Score=57.45  Aligned_cols=102  Identities=13%  Similarity=0.127  Sum_probs=63.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCC-------------CeEEEcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG-------------GKTVWGD  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~D  140 (349)
                      -+||.|+    |+ |.+|+.++..++..|++|++++++++..++........+......+             +. ...+
T Consensus         4 I~~vaVi----Ga-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~-~~~~   77 (186)
T d1wdka3           4 VKQAAVL----GA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIR-PTLS   77 (186)
T ss_dssp             CSSEEEE----CC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEE-EESS
T ss_pred             CCEEEEE----Cc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceee-cccc
Confidence            4689999    55 9999999999999999999999987543321100000000000000             00 0111


Q ss_pred             hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       141 ~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+    .+.+  .|.||.+...|++.-+.+...+.+.--+..|+.|+
T Consensus        78 ~~----~~~~--adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSn  118 (186)
T d1wdka3          78 YG----DFGN--VDLVVEAVVENPKVKQAVLAEVENHVREDAILASN  118 (186)
T ss_dssp             ST----TGGG--CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred             cc----cccc--cceeeeeecchHHHHHHHHHHHHhhcCCCeeEEec
Confidence            11    1233  49999999999999999999887765444555554

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.55  E-value=0.003  Score=47.48  Aligned_cols=69  Identities=23%  Similarity=0.253  Sum_probs=48.4

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |||.|.    |++|..|+.|++.+.++|+++.+..-.. ..                              +.+.+  +|
T Consensus         1 mki~i~----G~~GrMG~~i~~~~~~~~~~l~~~id~~-~~------------------------------~~~~~--~D   43 (128)
T d1vm6a3           1 MKYGIV----GYSGRMGQEIQKVFSEKGHELVLKVDVN-GV------------------------------EELDS--PD   43 (128)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEEETT-EE------------------------------EECSC--CS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHhcCCCeEEEEECCC-cH------------------------------HHhcc--CC
Confidence            579999    9999999999999999999876553211 00                              01122  48


Q ss_pred             EEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          155 VVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       155 ~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +||++..  .+.+.+.++.|.+.++ ++|
T Consensus        44 VvIDFS~--p~~~~~~l~~~~~~~~-p~V   69 (128)
T d1vm6a3          44 VVIDFSS--PEALPKTVDLCKKYRA-GLV   69 (128)
T ss_dssp             EEEECSC--GGGHHHHHHHHHHHTC-EEE
T ss_pred             EEEEecC--HHHHHHHHHHHHhcCC-CEE
Confidence            8887776  4566777787777776 444

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.52  E-value=0.0028  Score=50.42  Aligned_cols=101  Identities=17%  Similarity=0.208  Sum_probs=59.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC--------cccceec--CCCeEE-Ec--C
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--------RFNEIVS--AGGKTV-WG--D  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~--------~~~~l~~--~~~~~~-~~--D  140 (349)
                      +.+|-|+     |.|.+|..+++.|++.||+|++.+|+++..+++......        ...++..  ...+.+ ..  +
T Consensus         2 ~~nIg~I-----GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~   76 (176)
T d2pgda2           2 QADIALI-----GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKA   76 (176)
T ss_dssp             CBSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCT
T ss_pred             CCcEEEE-----eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCc
Confidence            3579999     789999999999999999999999988655443211100        0000000  011111 11  1


Q ss_pred             hhhH----HhhhcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          141 PAEV----GNVVGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       141 ~~~l----~~~~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      .+.+    ..++...+ -++||++...+...++.+.+.+++.|+
T Consensus        77 ~~~v~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~  120 (176)
T d2pgda2          77 GQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGI  120 (176)
T ss_dssp             THHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCC
Confidence            1111    12221111 267777777777777777777777765

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.50  E-value=0.011  Score=43.04  Aligned_cols=94  Identities=18%  Similarity=0.107  Sum_probs=61.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      -++++|||+     |.|.+|..-++.|++.|.+|++++........         ......++++.....+.  .-+.+.
T Consensus        10 l~~k~vlVv-----G~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~---------~~~~~~~i~~~~~~~~~--~dl~~~   73 (113)
T d1pjqa1          10 LRDRDCLIV-----GGGDVAERKARLLLEAGARLTVNALTFIPQFT---------VWANEGMLTLVEGPFDE--TLLDSC   73 (113)
T ss_dssp             CBTCEEEEE-----CCSHHHHHHHHHHHHTTBEEEEEESSCCHHHH---------HHHTTTSCEEEESSCCG--GGGTTC
T ss_pred             eCCCEEEEE-----CCCHHHHHHHHHHHHCCCeEEEEeccCChHHH---------HHHhcCCceeeccCCCH--HHhCCC
Confidence            467899999     78999999999999999999999865422110         01112245555544322  223343


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                        +.|+-+. .+-.....+.+.|++.|+  +|.+.
T Consensus        74 --~lv~~at-~d~~~n~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          74 --WLAIAAT-DDDTVNQRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             --SEEEECC-SCHHHHHHHHHHHHHTTC--EEEET
T ss_pred             --cEEeecC-CCHHHHHHHHHHHHHcCC--EEEeC
Confidence              6666544 455556788899999886  66654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.47  E-value=0.0072  Score=45.72  Aligned_cols=69  Identities=13%  Similarity=0.205  Sum_probs=49.3

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      ||.|+    |++|.+|+.+++.+.+. ++++.+.....+                          +...    +...++|
T Consensus         1 kI~v~----Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~--------------------------~~~~----~~~~~~D   46 (135)
T d1yl7a1           1 RVGVL----GAKGKVGATMVRAVAAADDLTLSAELDAGD--------------------------PLSL----LTDGNTE   46 (135)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHSTTSEEEEEECTTC--------------------------CTHH----HHTTTCS
T ss_pred             CEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCC--------------------------chhh----hccccCC
Confidence            79999    99999999999987665 678765542111                          1111    1123469


Q ss_pred             EEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          155 VVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       155 ~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      +||++..  -+.+...++.|.+.|+.
T Consensus        47 vvIDFS~--p~~~~~~~~~~~~~~~~   70 (135)
T d1yl7a1          47 VVIDFTH--PDVVMGNLEFLIDNGIH   70 (135)
T ss_dssp             EEEECCC--TTTHHHHHHHHHHTTCE
T ss_pred             EEEEccc--HHHHHHHHHHHHhcCCC
Confidence            9999986  46778889999999974

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.00096  Score=45.48  Aligned_cols=40  Identities=13%  Similarity=0.210  Sum_probs=35.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      .+..+|||+    ||+|-+|...++.+...|++|+++++++++.
T Consensus        30 ~~~~~vlI~----gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          30 PQDGEIVVT----GASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             GGGCEEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             cCCCcEEEE----eCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            356789999    9999999999999899999999999987544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.43  E-value=0.002  Score=51.31  Aligned_cols=101  Identities=19%  Similarity=0.273  Sum_probs=61.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCC-cc-c-------------ceecCCC-eEEE
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-RF-N-------------EIVSAGG-KTVW  138 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~-~~-~-------------~l~~~~~-~~~~  138 (349)
                      |||-|+     |.|.+|..+++.|++.||+|++.+|+++..+++.+.... .. .             .+..... ..+.
T Consensus         2 MkIGvI-----GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVV-----GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEE-----eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            679999     899999999999999999999999987655433211100 00 0             0000000 1111


Q ss_pred             cCh-------hhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          139 GDP-------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       139 ~D~-------~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      .+.       ..+...+..  -++++++........+.+.+.+.+.++ +|+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~--~~iii~~st~~~~~~~~~~~~l~~~~~-~~l  125 (178)
T d1pgja2          77 QAGAATDSTIEQLKKVFEK--GDILVDTGNAHFKDQGRRAQQLEAAGL-RFL  125 (178)
T ss_dssp             CCSHHHHHHHHHHHHHCCT--TCEEEECCCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             cCcchhhhhhhhhhhhccc--cceecccCccchhHHHHHHHHHhhcce-eEe
Confidence            111       122222332  378888888888888888888877765 444

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.42  E-value=0.0025  Score=50.90  Aligned_cols=95  Identities=15%  Similarity=0.229  Sum_probs=61.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE-c---Ch----hh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G---DP----AE  143 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---D~----~~  143 (349)
                      .+.+|||+    |+ |-+|...++.+...|. +|++++++++..+..           ...+.+.+. .   |.    +.
T Consensus        28 ~G~~VlV~----Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~~   91 (182)
T d1vj0a2          28 AGKTVVIQ----GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-----------EEIGADLTLNRRETSVEERRKA   91 (182)
T ss_dssp             BTCEEEEE----CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-Cccchhheeccccccccccccccccccccccc-----------ccccceEEEeccccchHHHHHH
Confidence            46799999    86 8999999999999997 799999877543211           112332221 1   22    22


Q ss_pred             HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +.+...+..+|+||.+.|.. ......++.++..|  ++++++
T Consensus        92 i~~~~~~~g~Dvvid~vG~~-~~~~~a~~~l~~~G--~iv~~G  131 (182)
T d1vj0a2          92 IMDITHGRGADFILEATGDS-RALLEGSELLRRGG--FYSVAG  131 (182)
T ss_dssp             HHHHTTTSCEEEEEECSSCT-THHHHHHHHEEEEE--EEEECC
T ss_pred             HHHhhCCCCceEEeecCCch-hHHHHHHHHhcCCC--EEEEEe
Confidence            34444455689999998853 33455566666544  677665

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.35  E-value=0.0019  Score=49.64  Aligned_cols=94  Identities=21%  Similarity=0.178  Sum_probs=58.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceec-----CCCeEEEcChhhHHhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVS-----AGGKTVWGDPAEVGNV  147 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~D~~~l~~~  147 (349)
                      +||.|+    |+ |.+|..++..|+.++.  +++.++++++......       .++.+     .......+|.+    .
T Consensus         2 ~KI~II----Ga-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a-------~Dl~~~~~~~~~~~~~~~~~~----~   65 (142)
T d1y6ja1           2 SKVAII----GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEA-------MDINHGLPFMGQMSLYAGDYS----D   65 (142)
T ss_dssp             CCEEEE----CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHH-------HHHTTSCCCTTCEEEC--CGG----G
T ss_pred             CeEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceee-------eeeccCcccCCCeeEeeCcHH----H
Confidence            589999    87 9999999999999875  8999998875442211       01111     11222333333    3


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcE-EEEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~-~i~~S  186 (349)
                      +.+.  |+|+-++|.              |..-.+.+++.+++.+-+- +|.+|
T Consensus        66 ~~~a--divvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          66 VKDC--DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             GTTC--SEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             hCCC--ceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            4444  999999883              4556777788777766433 44444

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.34  E-value=0.005  Score=49.10  Aligned_cols=100  Identities=22%  Similarity=0.219  Sum_probs=61.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC--cccCCCCCC-CcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPF-NRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~--~~~~~~~~~-~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+|.|+     |+|..|..++..|.+.|++|++..|..+.  .+.+..... ..+. ........  .-.+++++++++.
T Consensus         1 MkI~Vi-----GaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~-~~~~~~~i--~~~~~~~~~~~~a   72 (180)
T d1txga2           1 MIVSIL-----GAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLG-VKLNGVEI--FWPEQLEKCLENA   72 (180)
T ss_dssp             CEEEEE-----SCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTT-BCCCSEEE--ECGGGHHHHHTTC
T ss_pred             CEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhc-chhccccc--cccccHHHHHhcc
Confidence            689999     68999999999999999999999985432  222211110 0110 00001111  1256788888776


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCC-CcEEEEec
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFIS  186 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~g-v~~~i~~S  186 (349)
                        |+||.+..  ....+.+++.++..- .+.+|.++
T Consensus        73 --d~Ii~avp--s~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          73 --EVVLLGVS--TDGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             --SEEEECSC--GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred             --chhhcccc--hhhhHHHHHhhccccccceecccc
Confidence              99987554  567778887776653 33444443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.21  E-value=0.0031  Score=49.61  Aligned_cols=95  Identities=15%  Similarity=0.230  Sum_probs=60.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC-----hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD-----PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D-----~~~l~~  146 (349)
                      .+.+|||+    | .|-+|...++.+...|.+|+++++++++.+..           ...+... +..|     ..++.+
T Consensus        26 ~g~~vlV~----G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a-----------~~~ga~~~~~~~~~~~~~~~~~~   89 (170)
T d1e3ja2          26 LGTTVLVI----G-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-----------KNCGADVTLVVDPAKEEESSIIE   89 (170)
T ss_dssp             TTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------HHTTCSEEEECCTTTSCHHHHHH
T ss_pred             CCCEEEEE----c-ccccchhhHhhHhhhcccccccchHHHHHHHH-----------HHcCCcEEEeccccccccchhhh
Confidence            46789999    7 68899999999999999999999987544211           1112221 1111     222222


Q ss_pred             hhc---CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          147 VVG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       147 ~~~---~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .+.   +..+|+||++.+.. ......++.++..|  ++++++
T Consensus        90 ~~~~~~g~g~D~vid~~g~~-~~~~~a~~~~~~~G--~iv~~G  129 (170)
T d1e3ja2          90 RIRSAIGDLPNVTIDCSGNE-KCITIGINITRTGG--TLMLVG  129 (170)
T ss_dssp             HHHHHSSSCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECS
T ss_pred             hhhcccccCCceeeecCCCh-HHHHHHHHHHhcCC--ceEEEe
Confidence            222   33589999999843 33445566666555  687665

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.20  E-value=0.0033  Score=48.61  Aligned_cols=89  Identities=18%  Similarity=0.072  Sum_probs=56.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |||-|+     |.|.+|+.+++.|+++||+|++.+|.......           ....++.+.    ++..++++..  |
T Consensus         1 MkIgiI-----G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~-----------~~~~~~~~~----~~~~e~~~~~--d   58 (152)
T d1i36a2           1 LRVGFI-----GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI-----------ERARTVGVT----ETSEEDVYSC--P   58 (152)
T ss_dssp             CEEEEE-----SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH-----------HHHHHHTCE----ECCHHHHHTS--S
T ss_pred             CEEEEE-----cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH-----------Hhhhccccc----ccHHHHHhhc--C
Confidence            689999     68999999999999999999998877643321           111122221    2234456665  9


Q ss_pred             EEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .||-+...+  ....++..+...--+.+|-+||
T Consensus        59 iIi~~v~~~--~~~~~~~~~~~~~~~~~id~st   89 (152)
T d1i36a2          59 VVISAVTPG--VALGAARRAGRHVRGIYVDINN   89 (152)
T ss_dssp             EEEECSCGG--GHHHHHHHHHTTCCSEEEECSC
T ss_pred             eEEEEecCc--hHHHHHHhhcccCCceeeccCc
Confidence            999887643  2334444444333345666665

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.19  E-value=0.0017  Score=49.82  Aligned_cols=97  Identities=18%  Similarity=0.173  Sum_probs=58.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~l~~~~~~~  151 (349)
                      |||.|+    |+ |.+|+.++..|+.+|  .+++.++++++......... ...........++. ..|.++    +.+.
T Consensus         1 mKI~II----Ga-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~-~~~~~~~~~~~~i~~~~~~~~----~~da   70 (142)
T d1guza1           1 MKITVI----GA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDM-YESGPVGLFDTKVTGSNDYAD----TANS   70 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHH-HTTHHHHTCCCEEEEESCGGG----GTTC
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhh-hcccchhcccceEEecCCHHH----hcCC
Confidence            689999    86 999999999999987  58999998875432211000 00000111223333 234433    4454


Q ss_pred             CccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEE
Q 018900          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       152 ~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i  183 (349)
                        |+|+-++|.              |..-.+.+.+.+++.+-+-++
T Consensus        71 --dvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiv  114 (142)
T d1guza1          71 --DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPII  114 (142)
T ss_dssp             --SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEE
T ss_pred             --eEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence              999999883              345567777777776543333

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.14  E-value=0.0027  Score=49.41  Aligned_cols=100  Identities=17%  Similarity=0.199  Sum_probs=60.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceec----CCCeEEEcChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVS----AGGKTVWGDPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~D~~~l~~~  147 (349)
                      +++||.|+    |+ |.+|+.++..|...+. +++.++.+++......       .++.+    .+.........+.++.
T Consensus         6 k~~KI~II----Ga-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a-------~Dl~~~~~~~~~~~~~~~~~~~~~~   73 (154)
T d1pzga1           6 RRKKVAMI----GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKA-------LDLSHVTSVVDTNVSVRAEYSYEAA   73 (154)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHH-------HHHHHHHHHTTCCCCEEEECSHHHH
T ss_pred             CCCcEEEE----CC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHH-------HHHhhhccccCCeeEEeccCchhhh
Confidence            46799999    87 9999999988877774 8988887765332210       11110    1111111112334456


Q ss_pred             hcCCCccEEEeCCCC-------------------ChhhHHHHHHHHHhCCCcEEEEec
Q 018900          148 VGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~-------------------~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +++.  |+|+-+++.                   |..-.+.+++.+++.+-+-++.+-
T Consensus        74 ~~~a--diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviiv  129 (154)
T d1pzga1          74 LTGA--DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  129 (154)
T ss_dssp             HTTC--SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             hcCC--CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEe
Confidence            6666  999998872                   234467777777777655444443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.003  Score=48.59  Aligned_cols=96  Identities=22%  Similarity=0.223  Sum_probs=59.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHh-C--CCeEEEEEcCCCCcccCCCCCCCcccceecC----CCeEEEcChhhHHhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLG-S--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSA----GGKTVWGDPAEVGNV  147 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~-~--g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~D~~~l~~~  147 (349)
                      |||.|+    |++|.+|+.++..|.. .  ..++..++..+ .....       .-++.+.    ....+ ....+++ .
T Consensus         1 MKV~Ii----GaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~-------a~Dl~h~~~~~~~~~~-~~~~~~~-~   66 (145)
T d2cmda1           1 MKVAVL----GAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGV-------AVDLSHIPTAVKIKGF-SGEDATP-A   66 (145)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHH-------HHHHHTSCSSCEEEEE-CSSCCHH-H
T ss_pred             CEEEEE----cCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhH-------HHHHHCCccccCCcEE-EcCCCcc-c
Confidence            689999    9999999999988753 3  46899888753 22110       0011111    11111 1223333 4


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                      +++.  |+||.++|.              |....+.+.+.+.+.+-+ .+|.+|
T Consensus        67 ~~~a--DvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          67 LEGA--DVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             HTTC--SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCC--CEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            5565  999999993              456678888888777643 355555

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.11  E-value=0.0018  Score=51.27  Aligned_cols=95  Identities=19%  Similarity=0.218  Sum_probs=61.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhH-Hh---hh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV-GN---VV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l-~~---~~  148 (349)
                      .+..|||+    ||+|-+|...++.....|.+|+++++++++.+.           +...+.+.+. |.++. .+   ..
T Consensus        23 ~~~~VLV~----gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-----------~~~lGad~vi-~~~~~~~~~~~~~   86 (167)
T d1tt7a2          23 EKGSVLVT----GATGGVGGIAVSMLNKRGYDVVASTGNREAADY-----------LKQLGASEVI-SREDVYDGTLKAL   86 (167)
T ss_dssp             GGCCEEEE----STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH-----------HHHHTCSEEE-EHHHHCSSCCCSS
T ss_pred             CCCEEEEe----CCcchHHHHHHHHHHHcCCceEEEecCHHHHHH-----------HHhhcccceE-eccchhchhhhcc
Confidence            35579999    999999999999988899999999998865542           2223444432 32221 11   12


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+..+|+|+++.+-.  .....++.++..|  +++.++.
T Consensus        87 ~~~gvd~vid~vgg~--~~~~~~~~l~~~G--~iv~~G~  121 (167)
T d1tt7a2          87 SKQQWQGAVDPVGGK--QLASLLSKIQYGG--SVAVSGL  121 (167)
T ss_dssp             CCCCEEEEEESCCTH--HHHHHHTTEEEEE--EEEECCC
T ss_pred             cCCCceEEEecCcHH--HHHHHHHHhccCc--eEEEeec
Confidence            233589999987732  2234455544433  6776554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.09  E-value=0.0049  Score=48.44  Aligned_cols=37  Identities=32%  Similarity=0.392  Sum_probs=31.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENS  115 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~  115 (349)
                      |++|+|+    | .|.+|..+++.|.+.|+  +|++.+|+.+..
T Consensus         1 Mk~I~II----G-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~   39 (171)
T d2g5ca2           1 MQNVLIV----G-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI   39 (171)
T ss_dssp             CCEEEEE----S-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCEEEEE----c-cCHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence            5789999    5 79999999999999986  788888876544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.08  E-value=0.019  Score=40.50  Aligned_cols=87  Identities=18%  Similarity=0.167  Sum_probs=59.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..++|.++    |-.|--=+.||+.|.++||+|.+.++....          ....+...++++..+...+.   +.+  
T Consensus         7 ~~~~ihfi----GigG~GMs~LA~~L~~~G~~VsGSD~~~~~----------~~~~L~~~Gi~v~~g~~~~~---i~~--   67 (96)
T d1p3da1           7 RVQQIHFI----GIGGAGMSGIAEILLNEGYQISGSDIADGV----------VTQRLAQAGAKIYIGHAEEH---IEG--   67 (96)
T ss_dssp             TCCEEEEE----TTTSTTHHHHHHHHHHHTCEEEEEESCCSH----------HHHHHHHTTCEEEESCCGGG---GTT--
T ss_pred             hCCEEEEE----EECHHHHHHHHHHHHhCCCEEEEEeCCCCh----------hhhHHHHCCCeEEECCcccc---CCC--
Confidence            46789999    554444478899999999999999987522          22355566888777664321   233  


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      .|.||...++..+-.  -+.+|++.|++
T Consensus        68 ~d~vV~S~AI~~~np--el~~A~~~gip   93 (96)
T d1p3da1          68 ASVVVVSSAIKDDNP--ELVTSKQKRIP   93 (96)
T ss_dssp             CSEEEECTTSCTTCH--HHHHHHHTTCC
T ss_pred             CCEEEECCCcCCCCH--HHHHHHHcCCC
Confidence            499999888654432  35667777863

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.07  E-value=0.011  Score=41.29  Aligned_cols=84  Identities=17%  Similarity=0.080  Sum_probs=57.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-hhhHHhhhcCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-~~~l~~~~~~~~~  153 (349)
                      |||-++    |-.|-==+.||+.|+++|++|.+.++....          ....|...|+++..+. .+.+    .+  .
T Consensus         2 ~~ihfi----GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~----------~t~~L~~~Gi~i~~gh~~~~i----~~--~   61 (89)
T d1j6ua1           2 MKIHFV----GIGGIGMSAVALHEFSNGNDVYGSNIEETE----------RTAYLRKLGIPIFVPHSADNW----YD--P   61 (89)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSSCCH----------HHHHHHHTTCCEESSCCTTSC----CC--C
T ss_pred             cEEEEE----eECHHHHHHHHHHHHhCCCeEEEEeCCCCh----------hHHHHHHCCCeEEeeeccccc----CC--C
Confidence            678888    555544457899999999999999987522          2235666788876653 3333    33  5


Q ss_pred             cEEEeCCCCChhhHHHHHHHHHhCCCc
Q 018900          154 DVVLDNNGKNLDAVRPVADWAKSSGVK  180 (349)
Q Consensus       154 d~Vi~~a~~~~~~~~~ll~~a~~~gv~  180 (349)
                      |.||...++.-+-  .-+.+|++.|++
T Consensus        62 d~vV~SsAI~~~n--pel~~A~~~gIp   86 (89)
T d1j6ua1          62 DLVIKTPAVRDDN--PEIVRARMERVP   86 (89)
T ss_dssp             SEEEECTTCCTTC--HHHHHHHHTTCC
T ss_pred             CEEEEecCcCCCC--HHHHHHHHcCCC
Confidence            9999988865433  337788888873

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.01  E-value=0.0057  Score=47.13  Aligned_cols=102  Identities=19%  Similarity=0.308  Sum_probs=62.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      ..+||.|+    |+ |++|..++..|+.+|.  +++.++++++........ ...........+.+..+|.++    +.+
T Consensus         5 ~~~KI~Ii----Ga-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~D-l~~~~~~~~~~~~~~~~d~~~----l~d   74 (148)
T d1ldna1           5 GGARVVVI----GA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-FNHGKVFAPKPVDIWHGDYDD----CRD   74 (148)
T ss_dssp             TSCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHHHTTSSSSCCEEEECCGGG----TTT
T ss_pred             CCCeEEEE----Cc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhcc-HhhCccccCCCeEEEECCHHH----hcc
Confidence            35689999    86 9999999999998874  899999876442211000 000001112234444556544    444


Q ss_pred             CCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCc-EEEEec
Q 018900          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (349)
Q Consensus       151 ~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~-~~i~~S  186 (349)
                      .  |+||.+++.              |..-.+.+.+.+++.+-+ .+|.+|
T Consensus        75 a--Dvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          75 A--DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             C--SEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             c--eeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            4  999998883              345566777777666533 455444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.97  E-value=0.0021  Score=49.33  Aligned_cols=97  Identities=19%  Similarity=0.196  Sum_probs=60.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCC--CCcccCCCCCCCcccc--eecCCCeEEEcChhhHHhhhc
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGD--ENSDKMKKPPFNRFNE--IVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~--~~~~~~~~~~~~~~~~--l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ||.|+    ||+|.+|..++..|+.+|.  ++..++...  +.......    .+.+  ......++..+|.+++    .
T Consensus         2 KV~Ii----GaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~----Dl~~~~~~~~~~~i~~~~~~~~----~   69 (142)
T d1o6za1           2 KVSVV----GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAA----DTNHGIAYDSNTRVRQGGYEDT----A   69 (142)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHH----HHHHHHTTTCCCEEEECCGGGG----T
T ss_pred             eEEEE----CCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeec----chhhcccccCCceEeeCCHHHh----h
Confidence            79999    9999999999999999975  788888532  11110000    0000  0122344455565543    4


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcE-EEEec
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~-~i~~S  186 (349)
                      +.  |+||-++|.              |..-.+.+.+.+++.+-+- ++.+|
T Consensus        70 ~a--DiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          70 GS--DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             TC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             hc--CEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            44  999999883              4566778888888876443 44443

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.0055  Score=48.35  Aligned_cols=41  Identities=17%  Similarity=0.158  Sum_probs=34.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~  117 (349)
                      .++++|||.    | +|..++.++.+|.+.|.+|+++.|+.+..++
T Consensus        16 ~~~k~vlIl----G-aGGaarai~~al~~~g~~i~I~nRt~~ka~~   56 (170)
T d1nyta1          16 RPGLRILLI----G-AGGASRGVLLPLLSLDCAVTITNRTVSRAEE   56 (170)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred             CCCCEEEEE----C-CcHHHHHHHHHhcccceEEEeccchHHHHHH
Confidence            467899999    4 6888999999999999999999998765543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.92  E-value=0.031  Score=42.29  Aligned_cols=104  Identities=20%  Similarity=0.074  Sum_probs=69.2

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +.++|.|+    |++   +..|..+++.|.+.||+|+.+..+.+...                |..+    ..++.++-.
T Consensus        18 ~~ksIAVV----GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~----------------G~~~----~~sl~dlp~   73 (139)
T d2d59a1          18 RYKKIALV----GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL----------------GRKC----YPSVLDIPD   73 (139)
T ss_dssp             HCCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEEC----BSSGGGCSS
T ss_pred             cCCeEEEE----eecCCCCCchHHHHHHHHHCCCEEEEECCcccccC----------------CCcc----cccccccCc
Confidence            45789999    988   78999999999999999887764432211                2221    233333322


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                      .  +|.|+-+..  ...+..+++.|.+.|++.+++..+.          .           .-..++.+++.|+.+
T Consensus        74 ~--iD~v~i~vp--~~~~~~~~~e~~~~g~k~v~~~~G~----------~-----------~ee~~~~a~~~gi~v  124 (139)
T d2d59a1          74 K--IEVVDLFVK--PKLTMEYVEQAIKKGAKVVWFQYNT----------Y-----------NREASKKADEAGLII  124 (139)
T ss_dssp             C--CSEEEECSC--HHHHHHHHHHHHHHTCSEEEECTTC----------C-----------CHHHHHHHHHTTCEE
T ss_pred             c--ceEEEEEeC--HHHHHHHHHHHHHhCCCEEEEeccc----------c-----------CHHHHHHHHHCCCEE
Confidence            2  588776644  5677888888888899877654331          0           115677888888744

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0039  Score=49.13  Aligned_cols=95  Identities=20%  Similarity=0.312  Sum_probs=60.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc----ChhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----DPAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D~~~l~~~  147 (349)
                      .+.+|+|+    |+ |-+|...+..+...|. +|++++++++..+.           ....+.+.+..    |..+..+.
T Consensus        26 ~gd~VlI~----G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~-----------a~~~Ga~~~~~~~~~~~~~~~~~   89 (171)
T d1pl8a2          26 LGHKVLVC----GA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK-----------AKEIGADLVLQISKESPQEIARK   89 (171)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-----------HHHTTCSEEEECSSCCHHHHHHH
T ss_pred             CCCEEEEE----CC-CccHHHHHHHHHHcCCceEEeccCCHHHHHH-----------HHHhCCccccccccccccccccc
Confidence            45689999    76 9999999999999998 79999987654321           11123332221    23333332


Q ss_pred             h---cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          148 V---GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       148 ~---~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +   .+.++|+||.+.|.. ......++.++..|  ++++++
T Consensus        90 ~~~~~g~g~Dvvid~~G~~-~~~~~a~~~~~~gG--~iv~~G  128 (171)
T d1pl8a2          90 VEGQLGCKPEVTIECTGAE-ASIQAGIYATRSGG--TLVLVG  128 (171)
T ss_dssp             HHHHHTSCCSEEEECSCCH-HHHHHHHHHSCTTC--EEEECS
T ss_pred             ccccCCCCceEEEeccCCc-hhHHHHHHHhcCCC--EEEEEe
Confidence            2   234579999999853 23445556666544  788766

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.86  E-value=0.0023  Score=50.08  Aligned_cols=103  Identities=14%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      .+.+||-|+    |+ |.+|..++..|..+|.  ++..++++++.......... -...........-.+|.++    +.
T Consensus        18 ~~~~KV~II----Ga-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~-h~~~~~~~~~~~~~~d~~~----~~   87 (160)
T d1i0za1          18 VPNNKITVV----GV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQ-HGSLFLQTPKIVADKDYSV----TA   87 (160)
T ss_dssp             CCSSEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHH-HTGGGCCCSEEEECSSGGG----GT
T ss_pred             CCCCeEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHh-ccccccCCCeEEeccchhh----cc
Confidence            346799999    85 9999999999999986  89999987543321100000 0000001111122233433    34


Q ss_pred             CCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcE-EEEec
Q 018900          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~-~i~~S  186 (349)
                      +.  |+||..||.              |....+.++..+++.+-+- +|.+|
T Consensus        88 ~a--diVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          88 NS--KIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             TC--SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cc--cEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            44  999999883              4555777777777766443 45444

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.84  E-value=0.058  Score=39.33  Aligned_cols=102  Identities=23%  Similarity=0.290  Sum_probs=67.4

Q ss_pred             eEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      |+|.|+    |++   +..|..+++.|++.||+|+.+..+.+...                |..+    ..++.++-.  
T Consensus         2 KsIAVv----GaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~----------------G~~~----y~sl~~lp~--   55 (116)
T d1y81a1           2 RKIALV----GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE----------------GLKC----YRSVRELPK--   55 (116)
T ss_dssp             CEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEEC----BSSGGGSCT--
T ss_pred             cEEEEE----cccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc----------------Cccc----cccchhccc--
Confidence            679999    987   77899999999999999887754332211                2221    123333322  


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                      .+|.++-+..  -..+..+++.|.+.|++.+++-+..                     ..-.+++++++.|+++
T Consensus        56 ~~D~vvi~vp--~~~~~~~l~~~~~~g~k~v~~~~g~---------------------~~~~~~~~a~~~gi~v  106 (116)
T d1y81a1          56 DVDVIVFVVP--PKVGLQVAKEAVEAGFKKLWFQPGA---------------------ESEEIRRFLEKAGVEY  106 (116)
T ss_dssp             TCCEEEECSC--HHHHHHHHHHHHHTTCCEEEECTTS---------------------CCHHHHHHHHHHTCEE
T ss_pred             cceEEEEEeC--HHHHHHHHHHHHhcCCceEEeccch---------------------hhHHHHHHHHHcCCEE
Confidence            2588876543  5677788888888999876643220                     0125678888888754

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.79  E-value=0.019  Score=44.88  Aligned_cols=94  Identities=19%  Similarity=0.264  Sum_probs=56.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D~~~l~~~~~  149 (349)
                      ..+.+|||.    |+ |-+|...++.+...|.++++++++.+..+           .....+.+.+.  .+.+......+
T Consensus        29 ~~G~~VlI~----Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-----------~a~~lGad~~i~~~~~~~~~~~~~   92 (168)
T d1uufa2          29 GPGKKVGVV----GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-----------AAKALGADEVVNSRNADEMAAHLK   92 (168)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-----------HHHHHTCSEEEETTCHHHHHTTTT
T ss_pred             CCCCEEEEe----cc-chHHHHHHHHhhcccccchhhccchhHHH-----------HHhccCCcEEEECchhhHHHHhcC
Confidence            457899999    86 88999999999889999999998765432           11122333222  22333333333


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                        ++|++|.+.+... .....++.++..|  +++.++
T Consensus        93 --~~D~vid~~g~~~-~~~~~~~~l~~~G--~iv~~G  124 (168)
T d1uufa2          93 --SFDFILNTVAAPH-NLDDFTTLLKRDG--TMTLVG  124 (168)
T ss_dssp             --CEEEEEECCSSCC-CHHHHHTTEEEEE--EEEECC
T ss_pred             --CCceeeeeeecch-hHHHHHHHHhcCC--EEEEec
Confidence              4799999988432 1223333333322  555554

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.76  E-value=0.0053  Score=48.65  Aligned_cols=96  Identities=14%  Similarity=0.156  Sum_probs=62.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cC---hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GD---PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D---~~~l~  145 (349)
                      ..+.+|||+    |+ |-+|...++.+...|. +|+++++++++.+.           ....+.+.+.  .+   .+.+.
T Consensus        26 ~~g~~VlI~----Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~-----------a~~lGa~~~i~~~~~~~~~~v~   89 (174)
T d1jqba2          26 EMGSSVVVI----GI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEA-----------AKFYGATDILNYKNGHIEDQVM   89 (174)
T ss_dssp             CTTCCEEEE----CC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHH-----------HHHHTCSEEECGGGSCHHHHHH
T ss_pred             CCCCEEEEE----cC-CcchhhhhhhhhcccccccccccchhhhHHH-----------HHhhCccccccccchhHHHHHH
Confidence            346789999    76 9999999999998996 78888887643321           1112332221  11   34556


Q ss_pred             hhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +...+..+|+||.+.+.. ......++.++..|  ++++++
T Consensus        90 ~~t~g~G~D~vid~~g~~-~~~~~a~~~~~~~G--~iv~~G  127 (174)
T d1jqba2          90 KLTNGKGVDRVIMAGGGS-ETLSQAVKMVKPGG--IISNIN  127 (174)
T ss_dssp             HHTTTSCEEEEEECSSCT-THHHHHHHHEEEEE--EEEECC
T ss_pred             HHhhccCcceEEEccCCH-HHHHHHHHHHhcCC--EEEEEe
Confidence            666666689999999854 23344566666544  677655

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.72  E-value=0.0016  Score=52.55  Aligned_cols=89  Identities=15%  Similarity=0.173  Sum_probs=56.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCC--CCcccce-ecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP--FNRFNEI-VSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~--~~~~~~l-~~~~~~~~~~D~~~l~~~~~  149 (349)
                      .|+||.|+     |+|..|.+++..|.+.||+|++.+|+++..+.+....  ...+.++ ..+++.+    ..+++++++
T Consensus         6 ~m~KI~Vi-----GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~----t~~l~~a~~   76 (189)
T d1n1ea2           6 YLNKAVVF-----GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF----TSDVEKAYN   76 (189)
T ss_dssp             CEEEEEEE-----CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHHT
T ss_pred             eeceEEEE-----CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccccccccc----chhhhhccC
Confidence            46789999     7899999999999999999999999865443322110  0011111 1122221    245777777


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHH
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWA  174 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a  174 (349)
                      +.  |.||.+..  ....+.+++.+
T Consensus        77 ~a--d~iiiavP--s~~~~~~~~~~   97 (189)
T d1n1ea2          77 GA--EIILFVIP--TQFLRGFFEKS   97 (189)
T ss_dssp             TC--SCEEECSC--HHHHHHHHHHH
T ss_pred             CC--CEEEEcCc--HHHHHHHHHHH
Confidence            76  88887654  44555555544

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.72  E-value=0.0018  Score=49.77  Aligned_cols=94  Identities=15%  Similarity=0.187  Sum_probs=59.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCccccee------cCCCeEEE-cChhhHH
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIV------SAGGKTVW-GDPAEVG  145 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~------~~~~~~~~-~D~~~l~  145 (349)
                      |||.|+    |+ |.+|..++..|+.+|  .+++.++++++.....       ..++.      ....++.. .|.+   
T Consensus         1 MKI~II----Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~-------alDl~~~~~~~~~~~~i~~~~d~~---   65 (142)
T d1ojua1           1 MKLGFV----GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGE-------AMDLAHAAAGIDKYPKIVGGADYS---   65 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHH-------HHHHHHHHHTTTCCCEEEEESCGG---
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHH-------HHHHhhhccccCCCCccccCCCHH---
Confidence            689999    86 999999999998887  4799999876443210       00111      11122232 2333   


Q ss_pred             hhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEec
Q 018900          146 NVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                       .+.+.  |+||-.++.              |..-.+.+.+.+++.+-+-++.+-
T Consensus        66 -~~~~a--diVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1ojua1          66 -LLKGS--EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (142)
T ss_dssp             -GGTTC--SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             -Hhccc--cEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEe
Confidence             44454  999998883              455577777777777644444433

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.71  E-value=0.0022  Score=49.11  Aligned_cols=98  Identities=21%  Similarity=0.271  Sum_probs=59.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      |||.|+    |+ |.+|..++..|+.++  .+++.++++++............ ..+ ........+|.++    +++. 
T Consensus         1 mKI~II----Ga-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~-~~~-~~~~~~~~~~~~~----~~~a-   68 (140)
T d1a5za1           1 MKIGIV----GL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHG-TPF-TRRANIYAGDYAD----LKGS-   68 (140)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-GGG-SCCCEEEECCGGG----GTTC-
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccc-ccc-cccccccCCcHHH----hcCC-
Confidence            689999    86 999999999888876  48999998764332110000000 001 1233444444443    4454 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEe
Q 018900          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       153 ~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                       |+||-+++.              |..-.+.+.+.+++.+-+-++.+
T Consensus        69 -divvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv  114 (140)
T d1a5za1          69 -DVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (140)
T ss_dssp             -SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             -CEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence             999999883              44557777777777664444443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.55  E-value=0.0031  Score=48.61  Aligned_cols=98  Identities=22%  Similarity=0.287  Sum_probs=58.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      |||.|+    |+ |++|..++..|+.+|  .+++.++++++......... ...............+|.+++    ++. 
T Consensus         2 kKI~II----Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl-~~a~~~~~~~~~~~~~d~~~l----~~a-   70 (146)
T d1hyha1           2 RKIGII----GL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDF-QDAMANLEAHGNIVINDWAAL----ADA-   70 (146)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH-HHHGGGSSSCCEEEESCGGGG----TTC-
T ss_pred             CeEEEE----Cc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhh-hccccccCCccceeccCHHHh----ccc-
Confidence            789999    84 999999999999887  48999888764332110000 000001112334445555443    444 


Q ss_pred             ccEEEeCCCC------------------ChhhHHHHHHHHHhCCCcEEEE
Q 018900          153 FDVVLDNNGK------------------NLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       153 ~d~Vi~~a~~------------------~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                       |+||-++|.                  |..-.+.+.+.+++.+-+-++.
T Consensus        71 -diVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivi  119 (146)
T d1hyha1          71 -DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLV  119 (146)
T ss_dssp             -SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             -cEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence             999998883                  2334666677777776444443

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.53  E-value=0.0089  Score=47.74  Aligned_cols=35  Identities=17%  Similarity=0.364  Sum_probs=29.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV  110 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R  110 (349)
                      +++.||.|+    |||||+|..+++.|.+.. .++..+.-
T Consensus         3 ~~kikVaIl----GATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           3 GEEVRIAVL----GASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SSCEEEEEE----SCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CCccEEEEE----CcccHHHHHHHHHHHhCCCceEEEEec
Confidence            467899999    999999999999998874 47766653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.34  E-value=0.0097  Score=46.54  Aligned_cols=97  Identities=19%  Similarity=0.300  Sum_probs=73.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..-+|+|+     |.|..|..-++.+...|.+|++++++.+..++        ++......++....+.+.+.+.+.+. 
T Consensus        31 ~pa~V~Vi-----GaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~--------l~~~~~~~~~~~~~~~~~l~~~~~~a-   96 (168)
T d1pjca1          31 KPGKVVIL-----GGGVVGTEAAKMAVGLGAQVQIFDINVERLSY--------LETLFGSRVELLYSNSAEIETAVAEA-   96 (168)
T ss_dssp             CCCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------HHHHHGGGSEEEECCHHHHHHHHHTC-
T ss_pred             CCcEEEEE-----CCChHHHHHHHHHhhCCCEEEEEeCcHHHHHH--------HHHhhcccceeehhhhhhHHHhhccC-
Confidence            45689999     78999999999999999999999998765542        23444556788888889999999887 


Q ss_pred             ccEEEeCCCC-----ChhhHHHHHHHHHhCCCcEEEEec
Q 018900          153 FDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~-----~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                       |+||.++-.     ...-++.+++.+|.--+  +|=++
T Consensus        97 -DivI~aalipG~~aP~lIt~~mv~~Mk~GSV--IVDva  132 (168)
T d1pjca1          97 -DLLIGAVLVPGRRAPILVPASLVEQMRTGSV--IVDVA  132 (168)
T ss_dssp             -SEEEECCCCTTSSCCCCBCHHHHTTSCTTCE--EEETT
T ss_pred             -cEEEEeeecCCcccCeeecHHHHhhcCCCcE--EEEee
Confidence             999987763     23447788887776443  45444

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.33  E-value=0.023  Score=42.28  Aligned_cols=94  Identities=21%  Similarity=0.151  Sum_probs=64.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ..+|+|.     |.|.+|+.+++++.. .||+++++..+......         ..  -.|+.+.  +.+++.++... .
T Consensus         3 ~~~v~I~-----GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G---------~~--I~Gi~V~--~~~~l~~~~~~-~   63 (126)
T d2dt5a2           3 KWGLCIV-----GMGRLGSALADYPGFGESFELRGFFDVDPEKVG---------RP--VRGGVIE--HVDLLPQRVPG-R   63 (126)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT---------CE--ETTEEEE--EGGGHHHHSTT-T
T ss_pred             CceEEEE-----cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcC---------CE--ECCEEEe--cHHHHHHHHhh-c
Confidence            4589999     799999999998754 47898888765432211         11  1255555  45667777655 3


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccc
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~  188 (349)
                      ++.++-+..  -...+.+++.+.+.|++.+.-++..
T Consensus        64 i~iai~~i~--~~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          64 IEIALLTVP--REAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             CCEEEECSC--HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             ccEEEEeCC--HHHHHHHHHHHHHcCCCEEeecCce
Confidence            565555443  4566789999999999888766543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.32  E-value=0.014  Score=45.62  Aligned_cols=96  Identities=21%  Similarity=0.190  Sum_probs=58.2

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE--cChhhHHhhhc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVG  149 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~D~~~l~~~~~  149 (349)
                      ..+.+|||+    |+ |.+|...++.+...|.+|+++++++++.+.           ....+.+.+.  .+..++.+...
T Consensus        26 ~~g~~vlI~----Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~-----------a~~lGa~~~i~~~~~~~~~~~~~   89 (168)
T d1piwa2          26 GPGKKVGIV----GL-GGIGSMGTLISKAMGAETYVISRSSRKRED-----------AMKMGADHYIATLEEGDWGEKYF   89 (168)
T ss_dssp             STTCEEEEE----CC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-----------HHHHTCSEEEEGGGTSCHHHHSC
T ss_pred             CCCCEEEEE----CC-CCcchhHHHHhhhccccccccccchhHHHH-----------hhccCCcEEeeccchHHHHHhhh
Confidence            356789999    86 999999998888889999999998764432           1222333222  12223333332


Q ss_pred             CCCccEEEeCCCCChhh-HHHHHHHHHhCCCcEEEEec
Q 018900          150 GVTFDVVLDNNGKNLDA-VRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~-~~~ll~~a~~~gv~~~i~~S  186 (349)
                      + .+|+|+.+.+..... ....++.++..|  +++.++
T Consensus        90 ~-~~d~vi~~~~~~~~~~~~~~~~~l~~~G--~iv~~G  124 (168)
T d1piwa2          90 D-TFDLIVVCASSLTDIDFNIMPKAMKVGG--RIVSIS  124 (168)
T ss_dssp             S-CEEEEEECCSCSTTCCTTTGGGGEEEEE--EEEECC
T ss_pred             c-ccceEEEEecCCccchHHHHHHHhhccc--eEEEec
Confidence            2 379999987743322 223344444433  677665

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.32  E-value=0.0065  Score=46.44  Aligned_cols=99  Identities=16%  Similarity=0.216  Sum_probs=58.7

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEE-EcChhhHHhhhcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGVT  152 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~D~~~l~~~~~~~~  152 (349)
                      +||.|+    |+ |.+|..++..|..++. ++..++.+++........ ......+.....++. .+|.+++    .+. 
T Consensus         2 ~KI~II----Ga-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~D-l~~~~~~~~~~~~i~~~~d~~~~----~~a-   70 (142)
T d1uxja1           2 KKISII----GA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALD-LYEASPIEGFDVRVTGTNNYADT----ANS-   70 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCCEEEESCGGGG----TTC-
T ss_pred             CeEEEE----CC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHH-hhccccccCCCCEEEecCcHHHh----cCC-
Confidence            689999    86 9999999998888774 888888776533211000 000001111122333 2344433    333 


Q ss_pred             ccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEEEEe
Q 018900          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFI  185 (349)
Q Consensus       153 ~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~i~~  185 (349)
                       |+||-++|.              |....+.+++.+.+.+-+-++.+
T Consensus        71 -dvvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          71 -DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             -SEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             -CEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence             999999983              34556788888877664444444

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.28  E-value=0.025  Score=44.25  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=27.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l~R~~  112 (349)
                      +++||.|+    | .|++|+.+++.|.+. +.+++++....
T Consensus         2 ~kirvgii----G-~G~ig~~~~~~l~~~~~~elvav~~~~   37 (170)
T d1f06a1           2 TNIRVAIV----G-YGNLGRSVEKLIAKQPDMDLVGIFSRR   37 (170)
T ss_dssp             CCEEEEEE----C-CSHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred             CcceEEEE----C-ChHHHHHHHHHHHhCCCcEEEEEEecc
Confidence            35789999    5 799999999999875 67877665433

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.18  E-value=0.035  Score=41.39  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=60.8

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhh
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~  148 (349)
                      ..++|.|+    |++   +..|..+.+.|.+.| ++|+.+..+.+...                |.++    ..++.++-
T Consensus         7 ~PksIAVV----GaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~----------------G~~~----y~sl~dlp   62 (129)
T d2csua1           7 NPKGIAVI----GASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ----------------GVKA----YKSVKDIP   62 (129)
T ss_dssp             SCSEEEEE----TCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET----------------TEEC----BSSTTSCS
T ss_pred             CCCeEEEE----ccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC----------------CeEe----ecchhhcC
Confidence            45789999    998   999999999987765 68888865543221                2221    12233322


Q ss_pred             cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       149 ~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .  .+|.++-+..  -+.+..+++.|.+.|++.++.+|+
T Consensus        63 ~--~vDlvvi~vp--~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          63 D--EIDLAIIVVP--KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             S--CCSEEEECSC--HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             C--CCceEEEecC--hHHhHHHHHHHHHcCCCEEEEecc
Confidence            2  3688886654  667778899998999998888876

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.15  E-value=0.0058  Score=47.19  Aligned_cols=37  Identities=22%  Similarity=0.324  Sum_probs=32.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSD  116 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~  116 (349)
                      |||.++     |.|.+|.++++.|++.| ++|++.+|+++..+
T Consensus         1 MkI~fI-----G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~   38 (152)
T d1yqga2           1 MNVYFL-----GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRE   38 (152)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHH
T ss_pred             CEEEEE-----cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHH
Confidence            689999     56999999999999887 99999999876554

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.048  Score=39.82  Aligned_cols=92  Identities=16%  Similarity=0.105  Sum_probs=60.1

Q ss_pred             cceEEEEEecCCCcc----------cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh
Q 018900           73 EKKKVLIVNTNSGGH----------AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt----------G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~  142 (349)
                      ..++|||+    |+.          -|.+.+.+++|.+.|++++.+.-+++...--...         .+.+-+-....+
T Consensus         3 ~~kkvlVi----GsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~---------aD~lYfeplt~e   69 (121)
T d1a9xa4           3 DREKIMVL----GGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT---------SDRLYFEPVTLE   69 (121)
T ss_dssp             SSCEEEEE----CCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS---------SSEEECCCCSHH
T ss_pred             CCCEEEEE----CCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh---------cCceEEccCCHH
Confidence            46789999    763          3789999999999999999998888655321110         011111122478


Q ss_pred             hHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCC
Q 018900          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv  179 (349)
                      .+.++++..++|.|+-..|-  .-..|+...+.+.|+
T Consensus        70 ~v~~Ii~~E~p~~ii~~~GG--Qtalnla~~L~~~gv  104 (121)
T d1a9xa4          70 DVLEIVRIEKPKGVIVQYGG--QTPLKLARALEAAGV  104 (121)
T ss_dssp             HHHHHHHHHCCSEEECSSST--HHHHTTHHHHHHTTC
T ss_pred             HHHHHHHHhCCCEEEeehhh--hhHHHHHHHHHHcCC
Confidence            88888887788988865441  223444555566675

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.04  E-value=0.086  Score=41.62  Aligned_cols=37  Identities=24%  Similarity=0.289  Sum_probs=33.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..+++|.|+     |.|.||+.+++.|..-|.+|++.+|...
T Consensus        40 l~gk~vgIi-----G~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVL-----GLGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEE-----SCSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCceEEEe-----ccccccccceeeeecccccccccccccc
Confidence            457899999     7999999999999999999999998764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.02  E-value=0.0099  Score=47.58  Aligned_cols=99  Identities=17%  Similarity=0.207  Sum_probs=59.6

Q ss_pred             ceEEEE-EecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc-C---hh----hH
Q 018900           74 KKKVLI-VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-D---PA----EV  144 (349)
Q Consensus        74 ~~~VLV-t~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-D---~~----~l  144 (349)
                      +.+|+| .    ||+|-+|...++.+...|.+|++++|..+..++.       ...+...+.+.+.. |   ..    .+
T Consensus        29 g~~vli~~----ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~-------~~~~~~lGad~vi~~~~~~~~~~~~~v   97 (189)
T d1gu7a2          29 GKDWFIQN----GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV-------VASLKELGATQVITEDQNNSREFGPTI   97 (189)
T ss_dssp             TTCEEEES----CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH-------HHHHHHHTCSEEEEHHHHHCGGGHHHH
T ss_pred             CCEEEEEe----CCCchHHHHHHHHHhhcCCeEEEEEecccccchH-------HhhhhhccccEEEeccccchhHHHHHH
Confidence            455666 6    8899999999998888899999999887544321       11122234443321 1   11    12


Q ss_pred             Hhhh--cCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          145 GNVV--GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       145 ~~~~--~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+..  .+.++|+|+++.+..  .....++.++..|  ++|.++.
T Consensus        98 ~~~~~~~g~~vdvv~D~vg~~--~~~~~~~~l~~~G--~~v~~G~  138 (189)
T d1gu7a2          98 KEWIKQSGGEAKLALNCVGGK--SSTGIARKLNNNG--LMLTYGG  138 (189)
T ss_dssp             HHHHHHHTCCEEEEEESSCHH--HHHHHHHTSCTTC--EEEECCC
T ss_pred             HHHHhhccCCceEEEECCCcc--hhhhhhhhhcCCc--EEEEECC
Confidence            2222  133479999988732  3455566665544  7885543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.01  E-value=0.0088  Score=47.82  Aligned_cols=100  Identities=13%  Similarity=0.112  Sum_probs=55.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEE-EEEcCCCCcccCCCCCCCcccceecCCCeEEE-c---C-hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G---D-PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~-~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~---D-~~~l~~  146 (349)
                      ....|||+    ||+|-+|...++.+...|.+++ ++++..+....+.          ...+.+.+. .   | .+.+.+
T Consensus        30 ~~etVLI~----gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~----------~~~gad~vi~~~~~~~~~~~~~   95 (187)
T d1vj1a2          30 SNQTMVVS----GAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLT----------SELGFDAAVNYKTGNVAEQLRE   95 (187)
T ss_dssp             SCCEEEES----STTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHH----------HHSCCSEEEETTSSCHHHHHHH
T ss_pred             CCCEEEEE----CCCchhhHHHHHHHHHcCCcceecccchHHHHhhhh----------hcccceEEeeccchhHHHHHHH
Confidence            34789999    9999999999999988897644 4455443322110          011222221 1   1 233333


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecccccc
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy  191 (349)
                      +. ..++|+|+++.|-  +.....++.++..|  |++.++.++-|
T Consensus        96 ~~-~~GvDvv~D~vGg--~~~~~~~~~l~~~G--~iv~~G~~s~~  135 (187)
T d1vj1a2          96 AC-PGGVDVYFDNVGG--DISNTVISQMNENS--HIILCGQISQY  135 (187)
T ss_dssp             HC-TTCEEEEEESSCH--HHHHHHHTTEEEEE--EEEEC------
T ss_pred             Hh-ccCceEEEecCCc--hhHHHHhhhccccc--cEEEecccccc
Confidence            33 3458999999883  23444445444433  78877765544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.93  E-value=0.029  Score=43.45  Aligned_cols=100  Identities=18%  Similarity=0.197  Sum_probs=56.8

Q ss_pred             cceEEEEEecCCCcccchHHHHH-HHHHhC-CCeEEEEE-cCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLA-KELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~-~~Ll~~-g~~V~~l~-R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ++.||-|+    | +|.+|+.+. +.|... ..+++++. |+.+....         ..-...++.+.....+++.+..+
T Consensus         3 kkirvaII----G-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~---------~~a~~~~i~~~~~~~d~l~~~~~   68 (157)
T d1nvmb1           3 QKLKVAII----G-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGL---------ARAQRMGVTTTYAGVEGLIKLPE   68 (157)
T ss_dssp             SCEEEEEE----C-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHH---------HHHHHTTCCEESSHHHHHHHSGG
T ss_pred             CCcEEEEE----c-CcHHHHHHHHHHHhhCCcceEEEEEecchhccch---------hhhhhcCCcccccceeeeeeccc
Confidence            35789999    7 999998755 444333 45777775 55432210         01112245554444666655544


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      ..++|+|+.+........+..+-.+.+.|+ ++|=.|+
T Consensus        69 ~~~iDiVf~ATpag~h~~~~~~~~aa~~G~-~VID~s~  105 (157)
T d1nvmb1          69 FADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTP  105 (157)
T ss_dssp             GGGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECST
T ss_pred             ccccCEEEEcCCchhHHHhHHHHHHHHcCC-EEEEccc
Confidence            445799998766444444444444445675 6676665

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.82  E-value=0.064  Score=42.02  Aligned_cols=96  Identities=16%  Similarity=0.166  Sum_probs=55.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----------
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----------  140 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----------  140 (349)
                      |++||.|-     |-|.||+.++++|+++. .+|+++....+...         ...+...+......+           
T Consensus         1 M~irIaIN-----GfGRIGR~v~Ral~~~~dieiVaINd~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~   66 (172)
T d2czca2           1 MKVKVGVN-----GYGTIGKRVAYAVTKQDDMELIGITKTKPDFE---------AYRAKELGIPVYAASEEFIPRFEKEG   66 (172)
T ss_dssp             CCEEEEEE-----CCSHHHHHHHHHHHTCTTEEEEEEEESSCSHH---------HHHHHHTTCCEEESSGGGHHHHHHHT
T ss_pred             CcEEEEEE-----CCCHHHHHHHHHHHhCCCceEEEEecCCChHH---------HHHhhhcCceeecccccceeeecccC
Confidence            67899999     58999999999998864 67777654221110         001111122222222           


Q ss_pred             ---hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          141 ---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       141 ---~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                         ...+..++.+  +|+||.|.|....  ..-++.-.++|+ +.|++|.
T Consensus        67 ~~~~~~~~~~~~~--vDvViEcTG~f~~--~~~~~~hl~~G~-k~Vi~s~  111 (172)
T d2czca2          67 FEVAGTLNDLLEK--VDIIVDATPGGIG--AKNKPLYEKAGV-KAIFQGG  111 (172)
T ss_dssp             CCCSCBHHHHHTT--CSEEEECCSTTHH--HHHHHHHHHHTC-EEEECTT
T ss_pred             ccccchhhhhhcc--CCEEEECCCCCCC--HHHHHHHHHcCC-CEEEECC
Confidence               1233444444  5999999996542  222344445687 5665664

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.81  E-value=0.018  Score=42.45  Aligned_cols=36  Identities=31%  Similarity=0.477  Sum_probs=32.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..++|+|+     |.|++|-.++..|.++|.+|+++.|.+.
T Consensus        29 ~~~~vvII-----GgG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIV-----GGGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEE-----CcchhHHHHHHHhhcccceEEEEeeccc
Confidence            35789999     7999999999999999999999999874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.78  E-value=0.01  Score=46.83  Aligned_cols=40  Identities=15%  Similarity=0.145  Sum_probs=33.8

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      ..+++|||.     |+|..|+.++..|.+.+-+|+++.|+.+...
T Consensus        16 ~~~k~vlIl-----GaGGaarai~~aL~~~~~~i~I~nR~~~~a~   55 (171)
T d1p77a1          16 RPNQHVLIL-----GAGGATKGVLLPLLQAQQNIVLANRTFSKTK   55 (171)
T ss_dssp             CTTCEEEEE-----CCSHHHHTTHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCEEEEE-----CCcHHHHHHHHHHcccCceeeeccchHHHHH
Confidence            467899999     5677899999999998889999999876554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.73  E-value=0.018  Score=45.01  Aligned_cols=96  Identities=17%  Similarity=0.255  Sum_probs=58.5

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeE-EEcC----hhhHHh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD----PAEVGN  146 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~D----~~~l~~  146 (349)
                      .+.+|+|+    |++|-+|...+..+...|. .|++++++++..+.           ....+.+. +..+    .+.+.+
T Consensus        27 ~g~~vlV~----G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~-----------~~~~Ga~~~i~~~~~~~~~~~~~   91 (170)
T d1jvba2          27 PTKTLLVV----GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEA-----------AKRAGADYVINASMQDPLAEIRR   91 (170)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHH-----------HHHHTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----eccccceeeeeecccccccccccccccchhhHHH-----------HHHcCCceeeccCCcCHHHHHHH
Confidence            46789999    9999999999999988884 88888887643321           11123322 2222    233333


Q ss_pred             hhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       147 ~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ...+..+|+|+.+.+.. ......+++++..|  +++.++
T Consensus        92 ~~~~~~~d~vid~~g~~-~~~~~a~~~l~~~G--~iv~~G  128 (170)
T d1jvba2          92 ITESKGVDAVIDLNNSE-KTLSVYPKALAKQG--KYVMVG  128 (170)
T ss_dssp             HTTTSCEEEEEESCCCH-HHHTTGGGGEEEEE--EEEECC
T ss_pred             Hhhcccchhhhcccccc-hHHHhhhhhcccCC--EEEEec
Confidence            33444589999998732 11222344444433  677665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.69  E-value=0.0083  Score=45.88  Aligned_cols=95  Identities=14%  Similarity=0.231  Sum_probs=59.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCCcccCCCCCCCcccceec-----CCCeEEEcChhhHHhh
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVS-----AGGKTVWGDPAEVGNV  147 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~D~~~l~~~  147 (349)
                      .||.|+    |+ |.+|..++..|+.+|.  +++.++++++..+..       ..++.+     ....+...+  +++ .
T Consensus         2 ~Ki~II----Ga-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~-------a~Dl~~a~~~~~~~~i~~~~--~~~-~   66 (143)
T d1llda1           2 TKLAVI----GA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAE-------VLDMQHGSSFYPTVSIDGSD--DPE-I   66 (143)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHH-------HHHHHHTGGGSTTCEEEEES--CGG-G
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhH-------HHHHHhccccCCCceeecCC--CHH-H
Confidence            589999    86 9999999999999875  899999876443210       001111     122232222  233 2


Q ss_pred             hcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhCCCcEE-EEec
Q 018900          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQF-LFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~gv~~~-i~~S  186 (349)
                      +.+.  |+||-++|.              |..-.+.+...+++.+-+-+ +.+|
T Consensus        67 ~~da--DvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          67 CRDA--DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             GTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             hhCC--cEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            4444  999999993              45567777777777764434 4444

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.68  E-value=0.023  Score=41.44  Aligned_cols=36  Identities=28%  Similarity=0.428  Sum_probs=32.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..++|+|+     |.|++|-.++..|.+.|.+|+++.|...
T Consensus        21 ~p~~v~Ii-----GgG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVI-----GGGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEE-----CCCccceeeeeeecccccEEEEEEecce
Confidence            45799999     7899999999999999999999999874

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.68  E-value=0.036  Score=41.12  Aligned_cols=84  Identities=18%  Similarity=0.252  Sum_probs=55.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcCh---hhHHhhhcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNVVGGV  151 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~---~~l~~~~~~~  151 (349)
                      |+|+|.    | -|-+|+.+++.|  +|++|++++.+++..           ..+...++.++.||.   +.|.++--+ 
T Consensus         1 kHivI~----G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~-----------~~~~~~~~~~i~Gd~~~~~~L~~a~i~-   61 (129)
T d2fy8a1           1 RHVVIC----G-WSESTLECLREL--RGSEVFVLAEDENVR-----------KKVLRSGANFVHGDPTRVSDLEKANVR-   61 (129)
T ss_dssp             CCEEEE----S-CCHHHHHHHHTS--CGGGEEEEESCTTHH-----------HHHHHTTCEEEESCTTSHHHHHHTTCT-
T ss_pred             CEEEEE----C-CCHHHHHHHHHH--cCCCCEEEEcchHHH-----------HHHHhcCccccccccCCHHHHHHhhhh-
Confidence            578999    5 688999999998  467888888776533           244456889999994   445443211 


Q ss_pred             CccEEEeCCCCChhhHHHHHHHHHhCC
Q 018900          152 TFDVVLDNNGKNLDAVRPVADWAKSSG  178 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~~~~ll~~a~~~g  178 (349)
                      +.+.+|-+...+ .....++..+|+..
T Consensus        62 ~A~~vi~~~~~d-~~n~~~~~~~r~~~   87 (129)
T d2fy8a1          62 GARAVIVNLESD-SETIHCILGIRKID   87 (129)
T ss_dssp             TCSEEEECCSSH-HHHHHHHHHHHHHC
T ss_pred             cCcEEEEeccch-hhhHHHHHHHHHHC
Confidence            258888766643 33344455556543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.59  E-value=0.0053  Score=47.91  Aligned_cols=37  Identities=22%  Similarity=0.379  Sum_probs=31.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDEN  114 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~~~  114 (349)
                      +..||.|+    |+ |.+|..++..|..+|.  +++.++++++.
T Consensus        18 ~~~KI~II----Ga-G~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          18 SRCKITVV----GV-GDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             CCCeEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            44589999    85 9999999999999975  89999987543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.56  E-value=0.024  Score=41.84  Aligned_cols=37  Identities=27%  Similarity=0.513  Sum_probs=33.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ...++|+|+     |.|++|..++..|.+.|.+|+++.|.+.
T Consensus        28 ~~~k~vvVi-----GgG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVI-----GSGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEE-----CChHHHHHHHHHhhccceEEEEEEecCc
Confidence            356799999     7899999999999999999999998763

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.54  E-value=0.0064  Score=49.00  Aligned_cols=37  Identities=30%  Similarity=0.416  Sum_probs=30.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~  117 (349)
                      |||.|+     |.||+|..++..| ++||+|++++-+++..++
T Consensus         1 MkI~Vi-----GlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           1 MKIAVA-----GSGYVGLSLGVLL-SLQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHH-TTTSEEEEECSCHHHHHH
T ss_pred             CEEEEE-----CCChhHHHHHHHH-HCCCcEEEEECCHHHHHH
Confidence            689999     5999999998655 679999999987654443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.0073  Score=48.14  Aligned_cols=41  Identities=17%  Similarity=0.195  Sum_probs=33.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcc
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSD  116 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~  116 (349)
                      ...+++|||+    | +|..|+.++.+|.+.|. ++++..|+.+..+
T Consensus        15 ~l~~k~vlIl----G-aGGaarai~~al~~~g~~~i~i~nR~~~~~~   56 (182)
T d1vi2a1          15 DIKGKTMVLL----G-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFD   56 (182)
T ss_dssp             CCTTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHH
T ss_pred             CcCCCEEEEE----C-CcHHHHHHHHHHhhcCCceEeeeccchHHHH
Confidence            3467899999    5 58889999999999986 7999999876543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.48  E-value=0.1  Score=43.21  Aligned_cols=112  Identities=15%  Similarity=0.203  Sum_probs=67.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCeE
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGKT  136 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~~  136 (349)
                      -...+|||+     |.|.+|+++++.|...|. ++++++.+.-....+..+..-...++              ..+.+++
T Consensus        28 L~~~~Vlii-----G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i  102 (247)
T d1jw9b_          28 LKDSRVLIV-----GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAI  102 (247)
T ss_dssp             HHHCEEEEE-----CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred             HhCCCEEEE-----CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccch
Confidence            356799999     578899999999999996 78888765433332222211111111              1233333


Q ss_pred             EEcC----hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccC
Q 018900          137 VWGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (349)
Q Consensus       137 ~~~D----~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~  192 (349)
                      ...+    .+.....+...  |+|+.+.. +...-..+-++|.+.++ .+|+-+..+.+|
T Consensus       103 ~~~~~~~~~~~~~~~~~~~--divid~~d-~~~~~~~in~~~~~~~i-p~i~g~~~~~~g  158 (247)
T d1jw9b_         103 TPVNALLDDAELAALIAEH--DLVLDCTD-NVAVRNQLNAGCFAAKV-PLVSGAAIRMEG  158 (247)
T ss_dssp             EEECSCCCHHHHHHHHHTS--SEEEECCS-SHHHHHHHHHHHHHHTC-CEEEEEEEBTEE
T ss_pred             hhhhhhhhhcccccccccc--ceeeeccc-hhhhhhhHHHHHHHhCC-Cccccccccccc
Confidence            3322    34455555554  88887764 45555666678888786 577766555444

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.42  E-value=0.073  Score=42.54  Aligned_cols=75  Identities=15%  Similarity=0.144  Sum_probs=50.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc----C-hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D-PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D-~~~l~  145 (349)
                      ..+.+|||.    |+ |-+|...+..+...|. +|++++++++..+           .....+.+.+.-    | .+.+.
T Consensus        24 ~~G~tVlV~----Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~-----------~a~~~Ga~~~~~~~~~~~~~~i~   87 (195)
T d1kola2          24 GPGSTVYVA----GA-GPVGLAAAASARLLGAAVVIVGDLNPARLA-----------HAKAQGFEIADLSLDTPLHEQIA   87 (195)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-----------HHHHTTCEEEETTSSSCHHHHHH
T ss_pred             CCCCEEEEE----Cc-CHHHHHHHHHHHhhcccceeeecccchhhH-----------hhhhccccEEEeCCCcCHHHHHH
Confidence            346799999    75 9999888888877776 7888887654332           112224444432    2 34556


Q ss_pred             hhhcCCCccEEEeCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK  162 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~  162 (349)
                      ++..+..+|++|.+.|.
T Consensus        88 ~~t~g~g~D~vid~vG~  104 (195)
T d1kola2          88 ALLGEPEVDCAVDAVGF  104 (195)
T ss_dssp             HHHSSSCEEEEEECCCT
T ss_pred             HHhCCCCcEEEEECccc
Confidence            66667678999999884

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.37  E-value=0.059  Score=41.31  Aligned_cols=101  Identities=15%  Similarity=0.138  Sum_probs=59.6

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCC---CCCCcccceecCCCeEEEc-Ch----hhHHhh
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK---PPFNRFNEIVSAGGKTVWG-DP----AEVGNV  147 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~-D~----~~l~~~  147 (349)
                      ||-++     |.|.+|..+++.|++.|+.+ +..|..++..++..   ........+....+.+... +.    .....+
T Consensus         2 kIg~I-----GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l   75 (156)
T d2cvza2           2 KVAFI-----GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEAL   75 (156)
T ss_dssp             CEEEE-----CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred             eEEEE-----eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccc
Confidence            68899     67999999999999999866 56676543322110   0000111111111111111 11    222333


Q ss_pred             hcCCC-ccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          148 VGGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       148 ~~~~~-~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      +.... -..+|.+...+.+.++.+.+.+++.|+ +|+
T Consensus        76 ~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi-~~l  111 (156)
T d2cvza2          76 YPYLREGTYWVDATSGEPEASRRLAERLREKGV-TYL  111 (156)
T ss_dssp             TTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTE-EEE
T ss_pred             cccccccccccccccCCHHHHHHHHHHHHHcCC-eEE
Confidence            33332 577888888999999999999988775 455

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.034  Score=40.50  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=32.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .++|+|+     |.|++|-.++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIi-----GgG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVV-----GAGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEE-----CCChhhHHHHHHhhccccEEEEEeecch
Confidence            4789999     7999999999999999999999999764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.19  E-value=0.038  Score=40.67  Aligned_cols=36  Identities=22%  Similarity=0.403  Sum_probs=32.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..++++|+     |.|++|-.++..|.+.|.+|+++.|.+.
T Consensus        22 ~p~~~vIi-----G~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTII-----GGGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCeEEEE-----CCCchHHHHHHHHHhhCcceeEEEeccc
Confidence            45799999     7999999999999999999999999764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.10  E-value=0.025  Score=44.39  Aligned_cols=95  Identities=11%  Similarity=0.207  Sum_probs=55.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEE-EEEcCCCCcccCCCCCCCcccceecCCC-eEEEcC----hhhHH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD----PAEVG  145 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~-~l~R~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~D----~~~l~  145 (349)
                      ..+.+|||+    |+ |.+|...++.+...|.+++ +.++++++.+.           ....+. +++..+    .+.+.
T Consensus        27 ~~g~~VlI~----G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-----------a~~~Ga~~~i~~~~~~~~~~i~   90 (174)
T d1f8fa2          27 TPASSFVTW----GA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-----------AKQLGATHVINSKTQDPVAAIK   90 (174)
T ss_dssp             CTTCEEEEE----SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-----------HHHHTCSEEEETTTSCHHHHHH
T ss_pred             CCCCEEEEe----CC-CHHHhhhhhcccccccceeeeeccHHHHHHH-----------HHHcCCeEEEeCCCcCHHHHHH
Confidence            346789999    87 9999999998888887654 55555433221           111232 223222    23333


Q ss_pred             hhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ++..+ ++|+||.+.+.. ......++.++..|  ++++++
T Consensus        91 ~~t~g-g~D~vid~~G~~-~~~~~~~~~~~~~G--~i~~~G  127 (174)
T d1f8fa2          91 EITDG-GVNFALESTGSP-EILKQGVDALGILG--KIAVVG  127 (174)
T ss_dssp             HHTTS-CEEEEEECSCCH-HHHHHHHHTEEEEE--EEEECC
T ss_pred             HHcCC-CCcEEEEcCCcH-HHHHHHHhcccCce--EEEEEe
Confidence            33333 689999998843 23334455555444  677665

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.07  E-value=0.029  Score=41.07  Aligned_cols=35  Identities=29%  Similarity=0.359  Sum_probs=32.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .++|+|+     |.|++|-.++..|...|.+|+++.|...
T Consensus        22 p~~v~Ii-----GgG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIV-----GSGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEE-----CCchHHHHHHHHHHhccccceeeehhcc
Confidence            5789999     7899999999999999999999999763

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.03  E-value=0.02  Score=43.98  Aligned_cols=37  Identities=22%  Similarity=0.412  Sum_probs=29.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS  115 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~  115 (349)
                      +.||.|+    |+ |.+|+.++..|..++ .++..++++++..
T Consensus         3 ~~KI~II----Ga-G~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           3 KAKIVLV----GS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCeEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            4689999    85 999999998777776 4888888876543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.03  E-value=0.017  Score=45.83  Aligned_cols=91  Identities=11%  Similarity=0.150  Sum_probs=54.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      +.||.|+    | .|.+|+..++.|... +.+|+++ +++++....+...    + .+ ....+ +   .++++++++..
T Consensus         1 kiki~iI----G-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~----~-~~-~~~~~-~---~~~~~~ll~~~   65 (184)
T d1ydwa1           1 QIRIGVM----G-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA----N-NY-PESTK-I---HGSYESLLEDP   65 (184)
T ss_dssp             CEEEEEE----S-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----T-TC-CTTCE-E---ESSHHHHHHCT
T ss_pred             CeEEEEE----c-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhc----c-cc-cccee-e---cCcHHHhhhcc
Confidence            3689999    6 689999999988765 6788876 4544333221100    0 00 00111 1   24456666666


Q ss_pred             CccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          152 TFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       152 ~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      ++|+|+-+..                         .+++..+.+++.+++.++
T Consensus        66 ~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          66 EIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             TCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             ccceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            6788885544                         355667777777777665

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.96  E-value=0.028  Score=41.60  Aligned_cols=76  Identities=18%  Similarity=0.097  Sum_probs=54.0

Q ss_pred             cceEEEEEecCCCc----------ccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChh
Q 018900           73 EKKKVLIVNTNSGG----------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (349)
Q Consensus        73 ~~~~VLVt~~~~Gg----------tG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~  142 (349)
                      ..+||||.    |+          --|.+.+.+++|.+.|++++.+.-+++...--       ++  ..+.+-+-....+
T Consensus         6 ~~kkvlil----GsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd-------~d--~aD~lYfePlt~e   72 (127)
T d1a9xa3           6 DIKSILIL----GAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD-------PE--MADATYIEPIHWE   72 (127)
T ss_dssp             SCCEEEEE----CCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC-------GG--GSSEEECSCCCHH
T ss_pred             CCCEEEEE----CCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC-------hh--hcceeeeecCCHH
Confidence            45899999    77          44779999999999999999998888654211       00  1111112223578


Q ss_pred             hHHhhhcCCCccEEEeCCC
Q 018900          143 EVGNVVGGVTFDVVLDNNG  161 (349)
Q Consensus       143 ~l~~~~~~~~~d~Vi~~a~  161 (349)
                      .+.++++..++|.|+-..|
T Consensus        73 ~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          73 VVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHhCcCCeEEEee
Confidence            8999998888999986555

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.79  E-value=0.029  Score=40.81  Aligned_cols=36  Identities=19%  Similarity=0.367  Sum_probs=32.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .+++++|+     |.|++|-.++..|.+.|.+|+++.|.+.
T Consensus        20 ~p~~vvIi-----GgG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          20 LPQHLVVV-----GGGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CCSEEEEE-----CCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEE-----CCCHHHHHHHHHHhhcccceEEEeeecc
Confidence            35789999     7899999999999999999999998763

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.79  E-value=0.023  Score=43.76  Aligned_cols=26  Identities=19%  Similarity=0.340  Sum_probs=23.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG  102 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g  102 (349)
                      ..+||.|+    ||+|++|+.++..|...+
T Consensus         3 ~p~KV~Ii----GA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           3 APVRVAVT----GAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             CCEEEEES----STTSHHHHHHHHHHHTTT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhcc
Confidence            35799999    999999999999998765

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.74  E-value=0.023  Score=44.96  Aligned_cols=33  Identities=15%  Similarity=0.159  Sum_probs=27.7

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVG  111 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~  111 (349)
                      |.||.|.    | .|.||+.+++.|.+++ .+|+++...
T Consensus         1 MIKVaIN----G-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           1 MVNVAVN----G-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CeEEEEE----C-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            5689999    5 8999999999999874 688887643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.71  E-value=0.032  Score=41.05  Aligned_cols=34  Identities=29%  Similarity=0.518  Sum_probs=31.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .++|+|+     |.|++|-.++..|.+.|++|+++.|.+
T Consensus        32 ~~~vvIi-----GgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIII-----GGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEE-----ECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEE-----CCcHHHHHHHHHhhcccceEEEEeccc
Confidence            4789999     799999999999999999999999875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.71  E-value=0.056  Score=41.70  Aligned_cols=93  Identities=17%  Similarity=0.196  Sum_probs=57.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC-----hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D-----~~~l~~~  147 (349)
                      .+.+|||.    |+ |-+|...+..+...|.+|+++++++++.+           .....+.+.+...     .+.+.+.
T Consensus        27 ~g~~vlv~----G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~-----------~~k~~Ga~~~~~~~~~~~~~~~~~~   90 (168)
T d1rjwa2          27 PGEWVAIY----GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-----------LAKELGADLVVNPLKEDAAKFMKEK   90 (168)
T ss_dssp             TTCEEEEE----CC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-----------HHHHTTCSEEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEe----ec-ccchhhhhHHHhcCCCeEeccCCCHHHhh-----------hhhhcCcceecccccchhhhhcccc
Confidence            46789999    75 88999999999999999999998765432           2223345544432     2334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ..+  .|.+|.+++. -......+++++..|  +++.++
T Consensus        91 ~~~--~~~~v~~~~~-~~~~~~a~~~l~~~G--~i~~~g  124 (168)
T d1rjwa2          91 VGG--VHAAVVTAVS-KPAFQSAYNSIRRGG--ACVLVG  124 (168)
T ss_dssp             HSS--EEEEEESSCC-HHHHHHHHHHEEEEE--EEEECC
T ss_pred             cCC--CceEEeecCC-HHHHHHHHHHhccCC--ceEecc
Confidence            433  3666666552 344556666665444  566554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.70  E-value=0.034  Score=40.92  Aligned_cols=34  Identities=32%  Similarity=0.396  Sum_probs=31.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~  111 (349)
                      ..++++|+     |.|++|-.++..|.+.|.+|+++.|+
T Consensus        19 ~P~~vvII-----GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVV-----GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEE-----CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEE-----CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            45689999     78999999999999999999999875

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.68  E-value=0.056  Score=39.48  Aligned_cols=36  Identities=31%  Similarity=0.410  Sum_probs=32.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .+++|+|+     |.|++|-.++..|.+.|.+|+++.|...
T Consensus        21 ~p~~i~Ii-----G~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVI-----GAGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEE-----CCChHHHHHHHHHHHcCCceEEEEeecc
Confidence            45789999     7999999999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.63  E-value=0.049  Score=40.17  Aligned_cols=35  Identities=26%  Similarity=0.345  Sum_probs=32.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .++|+|+     |.|++|-.++..|.+.|.+|+++.|...
T Consensus        22 pk~vvIv-----GgG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIV-----GAGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEE-----cCCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            4789999     7899999999999999999999999764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.62  E-value=0.039  Score=41.30  Aligned_cols=36  Identities=17%  Similarity=0.420  Sum_probs=32.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..++|+|+     |.|++|-.++..|.+.|.+|+++.+.+.
T Consensus        34 ~~k~v~VI-----GgG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVI-----GGGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEE-----CCchHHHHHHHHHHhhCcceeeeeeccc
Confidence            35799999     7999999999999999999999999764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.55  E-value=0.11  Score=41.53  Aligned_cols=36  Identities=22%  Similarity=0.266  Sum_probs=32.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      -.+++|.|+     |.|.||+.+++.|..-|.+|.+.++..
T Consensus        41 l~gk~vgIi-----G~G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          41 VRDQVVGVV-----GTGHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             GGGSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccCCeEEEe-----cccccchhHHHhHhhhcccccccCccc
Confidence            457899999     899999999999999999999998765

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.52  E-value=0.015  Score=45.21  Aligned_cols=39  Identities=18%  Similarity=0.167  Sum_probs=33.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      ..+.+|+|.    |+ |-+|...++.+...|.+|+++++++++.
T Consensus        26 ~~g~~VlV~----Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          26 RPGQWVAIS----GI-GGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCCCEEEEe----ec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence            346789999    86 8999999998888999999999886544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.50  E-value=0.14  Score=38.68  Aligned_cols=34  Identities=21%  Similarity=0.494  Sum_probs=30.6

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R  110 (349)
                      .++++|||+    | .|.+|..-++.|++.|.+|+++..
T Consensus        11 l~gkrvLVi----G-gG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLI----G-GGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEE----E-ESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence            468999999    5 499999999999999999999964

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.42  E-value=0.042  Score=45.08  Aligned_cols=34  Identities=32%  Similarity=0.443  Sum_probs=31.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .+||+|+     |.|..|...+..|.++|++|+++.|..
T Consensus         6 ~~kVvVI-----GaGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVL-----GSGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEE-----CccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4689999     799999999999999999999999864

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.41  E-value=0.063  Score=41.01  Aligned_cols=36  Identities=17%  Similarity=0.251  Sum_probs=30.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~  112 (349)
                      ++|+|.|.    |+||-||....+-+.+.  .++|.+++-+.
T Consensus         1 ~pK~I~Il----GsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVL----GATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            36899999    99999999999888664  58999998654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.35  E-value=0.022  Score=43.88  Aligned_cols=26  Identities=23%  Similarity=0.355  Sum_probs=22.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG  102 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g  102 (349)
                      +.+||.|+    ||+|.+|+.++..|...+
T Consensus         2 ~p~KV~Ii----GA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           2 EPIRVLVT----GAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             CCEEEEES----STTSHHHHTTHHHHHTTT
T ss_pred             CceEEEEE----CCCCHHHHHHHHHHHHHH
Confidence            46799999    999999999999998653

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.27  E-value=0.044  Score=42.12  Aligned_cols=25  Identities=28%  Similarity=0.303  Sum_probs=22.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH  103 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~  103 (349)
                      -||.|+    |||||+|..+++.|.++.+
T Consensus         2 ~kVaIv----GATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVV----GATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHcCCC
Confidence            489999    9999999999998888754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.23  E-value=0.3  Score=37.96  Aligned_cols=95  Identities=17%  Similarity=0.224  Sum_probs=53.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcC------------
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD------------  140 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D------------  140 (349)
                      |++|-|-     |-|.||+.+++.|.+++ .+|+++........         ...+...+.......            
T Consensus         1 M~~VgIN-----GfGRIGR~v~R~l~~~~di~vvaInd~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~   66 (171)
T d1cf2o1           1 MKAVAIN-----GYGTVGKRVADAIAQQDDMKVIGVSKTRPDFE---------ARMALKKGYDLYVAIPERVKLFEKAGI   66 (171)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHHHTSSSEEEEEEEESSCSHH---------HHHHHHTTCCEEESSGGGHHHHHHTTC
T ss_pred             CeEEEEE-----cCcHHHHHHHHHHHhCCCceEEEEecCCcHHH---------HHHHHhcCCceEecccccceeecccCc
Confidence            6799999     58999999999998876 57776654321110         001111112222211            


Q ss_pred             --hhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          141 --PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       141 --~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                        ..++..++.+  +|+||.|.|..... .++ +.-.++|+ +.|++++
T Consensus        67 ~v~g~~~~~~~~--vDvViEcTG~f~~~-~~~-~~hl~~G~-K~vi~~~  110 (171)
T d1cf2o1          67 EVAGTVDDMLDE--ADIVIDCTPEGIGA-KNL-KMYKEKGI-KAIFQGG  110 (171)
T ss_dssp             CCCEEHHHHHHT--CSEEEECCSTTHHH-HHH-HHHHHTTC-EEEECTT
T ss_pred             ccCCChhHhhcC--CCEEEEccCCCCCH-HHH-HHHHHcCC-CEEEECC
Confidence              1123334444  59999999975432 333 33345686 5666664

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.05  E-value=0.068  Score=40.86  Aligned_cols=35  Identities=20%  Similarity=0.291  Sum_probs=30.0

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~  112 (349)
                      ||+|.|.    |+||-||...++-+.+.  .++|.+++-+.
T Consensus         1 MK~I~Il----GsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTIL----GSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEE----cCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            6899999    99999999999888765  47999998654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.03  E-value=0.22  Score=39.71  Aligned_cols=38  Identities=21%  Similarity=0.168  Sum_probs=33.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .-.+++|.|+     |.|.||+.+++.|..-|.+|++.++...
T Consensus        42 ~l~~ktvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVM-----GTGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeee-----ecccccccccccccccceeeeccCCccc
Confidence            3457899999     8999999999999999999999998653

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.90  E-value=0.055  Score=36.36  Aligned_cols=37  Identities=22%  Similarity=0.223  Sum_probs=32.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~  115 (349)
                      +|+|.|.     |+|.+|+-++.+....|++|.+++-+.+..
T Consensus         1 ~k~vgIl-----G~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           1 MKQVCVL-----GNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             CEEEEEE-----BCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CCEEEEE-----cCCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            5899999     799999999999999999999999776443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.89  E-value=0.044  Score=41.97  Aligned_cols=37  Identities=27%  Similarity=0.258  Sum_probs=32.9

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      |||.++     |.|.+|+.+++.|++.|++|++..|+.+...
T Consensus         1 MkIg~I-----G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~   37 (152)
T d2ahra2           1 MKIGII-----GVGKMASAIIKGLKQTPHELIISGSSLERSK   37 (152)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHTTSSCEEEEECSSHHHHH
T ss_pred             CEEEEE-----eccHHHHHHHHHHHhCCCeEEEEcChHHhHH
Confidence            689999     8999999999999999999999999865443

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.83  E-value=0.064  Score=43.77  Aligned_cols=93  Identities=12%  Similarity=0.135  Sum_probs=53.6

Q ss_pred             cceEEEEEecCCCcccchHH-HHHHHHHhC-CCeEEEE-EcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGHAVIGF-YLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~-~l~~~Ll~~-g~~V~~l-~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +.-||-|+    | .|.+|+ +++..+... +.+|+++ +|+++..++..+.    + .+....  +.  ...+++++++
T Consensus        32 ~~iriaiI----G-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~----~-~i~~~~--~~--~~~d~~ell~   97 (221)
T d1h6da1          32 RRFGYAIV----G-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE----Y-GVDPRK--IY--DYSNFDKIAK   97 (221)
T ss_dssp             CCEEEEEE----C-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH----T-TCCGGG--EE--CSSSGGGGGG
T ss_pred             CCEEEEEE----c-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh----h-cccccc--cc--ccCchhhhcc
Confidence            45699999    5 689996 566666554 6788866 4554443321100    0 000000  00  2344666666


Q ss_pred             CCCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          150 GVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       150 ~~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      ..++|+|+-+..                         .+++....|++++++.++
T Consensus        98 ~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~  152 (221)
T d1h6da1          98 DPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK  152 (221)
T ss_dssp             CTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred             cccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCC
Confidence            666788875544                         356677777887777765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.79  E-value=0.28  Score=38.68  Aligned_cols=37  Identities=27%  Similarity=0.242  Sum_probs=32.9

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      -..++|.|+     |.|.||+.+++.|..-|.+|.+.++...
T Consensus        42 l~~~~vgii-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          42 ARGKKLGII-----GYGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             STTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccceEEEEe-----ecccchhhhhhhcccccceEeecccccc
Confidence            457899999     8999999999999999999999998653

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.71  E-value=0.059  Score=42.34  Aligned_cols=98  Identities=9%  Similarity=0.095  Sum_probs=60.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc----C--hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D--PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D--~~~l  144 (349)
                      ..+..|+|+    |+ |-+|...++.+...| .+|+++++++++.+..+           ..+.+.+..    |  .+.+
T Consensus        28 ~~g~tVlI~----G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-----------~~GA~~~in~~~~~~~~~~~   91 (176)
T d1d1ta2          28 KPGSTCVVF----GL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-----------AVGATECISPKDSTKPISEV   91 (176)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HHTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----CC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-----------hcCCcEEECccccchHHHHH
Confidence            356789999    75 999999999999998 48999999876543211           113332221    1  2334


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .+...+.++|+||.+.+..... ...+..+.+ +-.++|+++.
T Consensus        92 ~~~~~g~G~d~vi~~~g~~~~~-~~a~~~~~~-~~G~~v~vG~  132 (176)
T d1d1ta2          92 LSEMTGNNVGYTFEVIGHLETM-IDALASCHM-NYGTSVVVGV  132 (176)
T ss_dssp             HHHHHTSCCCEEEECSCCHHHH-HHHHTTSCT-TTCEEEECSC
T ss_pred             HHHhccccceEEEEeCCchHHH-HHHHHHhhc-CCeEEEEEEc
Confidence            4555666789999988843211 222222222 2247887663

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.077  Score=41.82  Aligned_cols=38  Identities=32%  Similarity=0.502  Sum_probs=34.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..++++|+|+     |.|..|-..+..|.++||+|+++.+...
T Consensus        40 ~~~~k~V~II-----GaGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVV-----GAGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEE-----CccHHHHHHHHHHHhhccceEEEeccCc
Confidence            3457899999     7999999999999999999999998763

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.51  E-value=0.065  Score=42.12  Aligned_cols=99  Identities=13%  Similarity=0.090  Sum_probs=57.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhC---CC----eEEEEEcCCCCc--ccCCCCCCCcccceecC---CCe-EEEc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS---GH----EVTIMTVGDENS--DKMKKPPFNRFNEIVSA---GGK-TVWG  139 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~---g~----~V~~l~R~~~~~--~~~~~~~~~~~~~l~~~---~~~-~~~~  139 (349)
                      +..||.||    ||+|.+|..++..|...   |.    +++.++......  ..+.       .++.+.   ... .+. 
T Consensus        23 ~~~kV~I~----GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~-------mdl~d~a~~~~~~~~~-   90 (175)
T d7mdha1          23 KLVNIAVS----GAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVA-------MELEDSLYPLLREVSI-   90 (175)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHH-------HHHHTTTCTTEEEEEE-
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchh-------hhhcccccccccCccc-
Confidence            34689999    99999999999998864   21    455555433111  1000       011111   111 121 


Q ss_pred             ChhhHHhhhcCCCccEEEeCCCC--------------ChhhHHHHHHHHHhC-C-CcEEEEec
Q 018900          140 DPAEVGNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSS-G-VKQFLFIS  186 (349)
Q Consensus       140 D~~~l~~~~~~~~~d~Vi~~a~~--------------~~~~~~~ll~~a~~~-g-v~~~i~~S  186 (349)
                       ..+..+.+.+.  |+||-.+|.              |..-.+.+.+++.+. . -.+++.+|
T Consensus        91 -~~~~~~~~~~a--DvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          91 -GIDPYEVFEDV--DWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             -ESCHHHHTTTC--SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -cccchhhccCC--ceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence             23345566666  999999983              455577788888774 3 23455444

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.11  Score=48.33  Aligned_cols=111  Identities=20%  Similarity=0.235  Sum_probs=69.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCC--------CCCc-------ccceecCC--C
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKP--------PFNR-------FNEIVSAG--G  134 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~--------~~~~-------~~~l~~~~--~  134 (349)
                      +..+|||+    |+ |-+|..+++-|...|. .+++++.+.-....+..+        ...+       +.++ .+.  +
T Consensus        24 ~~s~Vlvv----G~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~l-Np~v~i   97 (529)
T d1yova1          24 ESAHVCLI----NA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-NSDVSG   97 (529)
T ss_dssp             HHCEEEEC----CC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTT-CTTSBC
T ss_pred             hCCCEEEE----CC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHh-CCCCcE
Confidence            45689999    75 6799999999999995 788887643221111110        0001       0111 122  3


Q ss_pred             eEEEcChhhHH----hhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCC
Q 018900          135 KTVWGDPAEVG----NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (349)
Q Consensus       135 ~~~~~D~~~l~----~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~  193 (349)
                      +.+..+++++.    +.+.+  +|+||.+.. +......+-++|++.++ .||...+.|.||.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~--~dvVv~~~~-~~~~~~~l~~~c~~~~i-p~i~~~~~G~~G~  156 (529)
T d1yova1          98 SFVEESPENLLDNDPSFFCR--FTVVVATQL-PESTSLRLADVLWNSQI-PLLICRTYGLVGY  156 (529)
T ss_dssp             CEESSCHHHHHHSCGGGGGG--CSEEEEESC-CHHHHHHHHHHHHHHTC-CEEEEEEETTEEE
T ss_pred             EEEcCCchhhhhhHHHHhcC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEeccCCEEE
Confidence            34544544432    33444  599997644 67777788889998887 6999988888774

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.29  Score=43.89  Aligned_cols=112  Identities=14%  Similarity=0.172  Sum_probs=63.3

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccce--------------ecCCCe--
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGK--  135 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l--------------~~~~~~--  135 (349)
                      +..||||+    |+ |.+|.++++.|...|. ++++++.+.-....+..+-+-+-.++              ..++++  
T Consensus        36 ~~~kVlvv----G~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~  110 (426)
T d1yovb1          36 DTCKVLVI----GA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVV  110 (426)
T ss_dssp             HHCCEEEE----CS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCE
T ss_pred             hcCeEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceE
Confidence            35689999    65 6699999999999997 78888876532222221111111111              123333  


Q ss_pred             EEEcChhh-HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCC-----------CcEEEEeccccccC
Q 018900          136 TVWGDPAE-VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-----------VKQFLFISSAGIYK  192 (349)
Q Consensus       136 ~~~~D~~~-l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~g-----------v~~~i~~Ss~~vy~  192 (349)
                      .+..+..+ -...++++  |+||.+.. |+..-..+-+.|....           ...+|.-++.+.+|
T Consensus       111 ~~~~~i~~~~~~~~~~~--DlVi~~~D-n~~aR~~in~~c~~l~k~~~~~~~~~~~iPlI~gg~~G~~G  176 (426)
T d1yovb1         111 PHFNKIQDFNDTFYRQF--HIIVCGLD-SIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKG  176 (426)
T ss_dssp             EECSCGGGBCHHHHTTC--SEEEECCS-CHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEE
T ss_pred             eeeccccchHHHHHHhc--chheeccC-cHHHHHHHHHHHHHhhcccccccccccCCceEEeEEeeeEE
Confidence            33333322 24456654  99998766 5555444445554321           12577777666544

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.19  E-value=0.058  Score=39.65  Aligned_cols=37  Identities=27%  Similarity=0.398  Sum_probs=33.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~  114 (349)
                      .+++++|+     |.|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        24 ~p~~~vii-----G~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          24 IPKKLVVI-----GAGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CCSEEEES-----CCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCeEEEE-----ccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            45789999     79999999999999999999999998743

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.16  E-value=0.063  Score=42.23  Aligned_cols=35  Identities=20%  Similarity=0.239  Sum_probs=31.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~  112 (349)
                      .++||+|+     |.|..|-..|.+|.++|+ +|+++.|..
T Consensus         3 ~~~kVaII-----GaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALL-----GAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEE-----CCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEE-----CChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            46899999     799999999999999998 599999875

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.04  E-value=0.079  Score=45.66  Aligned_cols=35  Identities=37%  Similarity=0.628  Sum_probs=32.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ++|||+|+     |+|..|-.+|..|.+.|++|+++.+..
T Consensus         1 k~KKI~II-----GaG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIV-----GAGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEE-----CCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            36899999     799999999999999999999999865

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.98  E-value=0.11  Score=44.11  Aligned_cols=37  Identities=35%  Similarity=0.623  Sum_probs=33.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      +...++|+|+     |+|..|-..+..|.++|++|+++.+..
T Consensus        27 ~~~pkkV~II-----GaG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIV-----GAGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEE-----CCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEE-----CCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3456899999     799999999999999999999999765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=91.94  E-value=0.46  Score=36.61  Aligned_cols=88  Identities=14%  Similarity=0.180  Sum_probs=53.1

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc--C----hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D----PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D----~~~l  144 (349)
                      ..+.+|||.    |+ |-+|...+..+...| .+|+++++++++.+...           ..+...+..  +    .+..
T Consensus        27 k~GdtVlV~----Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-----------~~Ga~~~i~~~~~~~~~~~~   90 (176)
T d2jhfa2          27 TQGSTCAVF----GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-----------EVGATECVNPQDYKKPIQEV   90 (176)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-----------HhCCeeEEecCCchhHHHHH
Confidence            356789999    88 558988888888887 58888888775443221           112222211  1    2334


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHh
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~  176 (349)
                      .+.....++|+||.+.+.. ......++.++.
T Consensus        91 ~~~~~~~G~D~vid~~G~~-~~~~~a~~~~~~  121 (176)
T d2jhfa2          91 LTEMSNGGVDFSFEVIGRL-DTMVTALSCCQE  121 (176)
T ss_dssp             HHHHTTSCBSEEEECSCCH-HHHHHHHHHBCT
T ss_pred             HHHHhcCCCCEEEecCCch-hHHHHHHHHHhc
Confidence            4444444689999998854 222333444443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.94  E-value=0.12  Score=37.44  Aligned_cols=35  Identities=11%  Similarity=0.188  Sum_probs=32.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .++|+|+     |.|++|-.++..|...|.+|+++.|.+.
T Consensus        22 ~~~vvVv-----GgG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVV-----GGSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEE-----CCCHHHHHHHHHHHhcchhheEeeccch
Confidence            5799999     7999999999999999999999999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.90  E-value=0.069  Score=39.41  Aligned_cols=36  Identities=22%  Similarity=0.396  Sum_probs=32.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..++++|+     |.|++|-.++..|.+.|.+|+++.|.+.
T Consensus        25 ~p~~vvIi-----GgG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLII-----GGGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEE-----SCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEE-----CCCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            35789999     7999999999999999999999999763

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.82  E-value=0.087  Score=43.38  Aligned_cols=36  Identities=19%  Similarity=0.362  Sum_probs=32.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ..+||+|+     |.|..|..++..|.++|++|+++.|.++
T Consensus         3 ~~~kV~Ii-----GaG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVV-----GGSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEE-----CcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            46789999     7899999999999999999999998654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.81  E-value=0.15  Score=39.38  Aligned_cols=37  Identities=19%  Similarity=0.263  Sum_probs=32.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ..+|+|+|+    |-+..+|+-++..|.++|..|+......
T Consensus        35 l~GK~v~VI----GrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          35 TFGLNAVVI----GASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CTTCEEEEE----CCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccceEEEE----eccccccHHHHHHHHHhhcccccccccc
Confidence            468999999    9999999999999999999998876543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.80  E-value=0.23  Score=38.63  Aligned_cols=97  Identities=13%  Similarity=0.157  Sum_probs=58.4

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc----C--hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D--PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----D--~~~l  144 (349)
                      ..+.+|+|+    | .|-+|...++.+...|. .|++.+++++..+-.           ...+.+.+..    |  ....
T Consensus        27 ~~G~~VlV~----G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-----------~~~Ga~~~i~~~~~~~~~~~~   90 (174)
T d1e3ia2          27 TPGSTCAVF----G-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-----------KALGATDCLNPRELDKPVQDV   90 (174)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----C-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH-----------HHhCCCcccCCccchhhhhhh
Confidence            346789999    7 59999999999999997 577777766433211           1113322221    1  2334


Q ss_pred             HhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      .+...+..+|+||.+.|..- .....++.++.. -.+++.++
T Consensus        91 ~~~~~~~G~d~vie~~G~~~-~~~~a~~~~~~g-~G~~v~vG  130 (174)
T d1e3ia2          91 ITELTAGGVDYSLDCAGTAQ-TLKAAVDCTVLG-WGSCTVVG  130 (174)
T ss_dssp             HHHHHTSCBSEEEESSCCHH-HHHHHHHTBCTT-TCEEEECC
T ss_pred             HhhhhcCCCcEEEEecccch-HHHHHHHHhhcC-CeEEEecC
Confidence            44445557899999998432 223333433332 24788665

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.65  E-value=0.47  Score=35.18  Aligned_cols=107  Identities=17%  Similarity=0.136  Sum_probs=66.7

Q ss_pred             cceEEEEEecCCCcc---cchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        73 ~~~~VLVt~~~~Ggt---G~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      ..++|.|+    |++   +..|..+++.|++.||+++.+--+... .           ++.  +.. .   ..++.++-.
T Consensus        12 ~pksIAVV----GaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~-----------~i~--g~~-~---~~~l~~i~~   69 (136)
T d1iuka_          12 QAKTIAVL----GAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-E-----------ELF--GEE-A---VASLLDLKE   69 (136)
T ss_dssp             HCCEEEEE----TCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-S-----------EET--TEE-C---BSSGGGCCS
T ss_pred             CCCeEEEE----eecCCCCCchHHHHHHHhcCCCCceEEEecccc-c-----------eee--cee-c---ccchhhccC
Confidence            35789999    998   668999999999999998876543311 1           110  111 1   122222222


Q ss_pred             CCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcEE
Q 018900          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (349)
Q Consensus       150 ~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~~  226 (349)
                        .+|.|+-+..  -..+..+++.|.+.|++.+++-+.  +                   ..-++.+++++.|++++
T Consensus        70 --~iD~v~v~~p--~~~v~~~v~~~~~~g~k~i~~q~G--~-------------------~~~e~~~~a~~~Gi~vV  121 (136)
T d1iuka_          70 --PVDILDVFRP--PSALMDHLPEVLALRPGLVWLQSG--I-------------------RHPEFEKALKEAGIPVV  121 (136)
T ss_dssp             --CCSEEEECSC--HHHHTTTHHHHHHHCCSCEEECTT--C-------------------CCHHHHHHHHHTTCCEE
T ss_pred             --CCceEEEecc--HHHHHHHHHHHHhhCCCeEEEecC--c-------------------cCHHHHHHHHHcCCEEE
Confidence              3588877654  455666777777788876665332  1                   01256788888898765

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.54  E-value=0.12  Score=36.73  Aligned_cols=37  Identities=19%  Similarity=0.108  Sum_probs=30.4

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ...+|+|+|+     |+|.-|..++.+|.+.+-+|+.+.|..
T Consensus        29 ~f~gK~VlVV-----G~g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVV-----GGASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEE-----CSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEE-----CCCCCHHHHHHHHHHhcCEEEEEEecC
Confidence            4568999999     788999999999988876766666654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.52  E-value=0.25  Score=39.17  Aligned_cols=38  Identities=16%  Similarity=0.085  Sum_probs=33.5

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .-.+++|.|+     |-|.||+.+++.|..-|.+|.+.++...
T Consensus        46 eL~gktvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGII-----GLGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeCceEEEe-----ccccccccceeeeeccccceeeccCccc
Confidence            3467899999     8999999999999999999999998653

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.50  E-value=0.16  Score=39.82  Aligned_cols=88  Identities=17%  Similarity=0.214  Sum_probs=51.5

Q ss_pred             ceEEEEEecCCCcccchHHHH-HHHHHhCC--CeEEEEE-cCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYL-AKELLGSG--HEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l-~~~Ll~~g--~~V~~l~-R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~  149 (349)
                      +.||.|+     |.|.+|+.+ +..+.+.+  ++|+++. ++++..+.+        .+.  .+...+.   ++++++++
T Consensus         3 kirigiI-----G~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~--------~~~--~~~~~~~---~~~~ell~   64 (181)
T d1zh8a1           3 KIRLGIV-----GCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEF--------AKM--VGNPAVF---DSYEELLE   64 (181)
T ss_dssp             CEEEEEE-----CCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHH--------HHH--HSSCEEE---SCHHHHHH
T ss_pred             CcEEEEE-----cCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhh--------hcc--cccccee---eeeecccc
Confidence            4689999     479999864 66666543  5777664 444332211        110  1222233   34555666


Q ss_pred             CCCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          150 GVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       150 ~~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      ..++|+|+-+..                         .+......+++.+++.++
T Consensus        65 ~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~  119 (181)
T d1zh8a1          65 SGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEK  119 (181)
T ss_dssp             SSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSS
T ss_pred             ccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCC
Confidence            666788886544                         245666777777777665

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.41  E-value=0.13  Score=41.23  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=27.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      |||+|.    | ++..|..++++|++.|++|.++.-.+
T Consensus         1 Mkiv~~----~-~~~~g~~~l~~L~~~g~~I~~Vvt~~   33 (203)
T d2blna2           1 MKTVVF----A-YHDMGCLGIEALLAAGYEISAIFTHT   33 (203)
T ss_dssp             CEEEEE----E-CHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CeEEEE----e-cCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            689999    4 55589999999999999998776443

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=91.13  E-value=0.5  Score=33.96  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=54.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      .+||||+    =-.-.+...+.+.|.+.||+|.......                             +.+..+.+...+
T Consensus         2 p~rILvV----dDd~~~~~~l~~~L~~~g~~v~~~~~~~-----------------------------~al~~l~~~~~~   48 (118)
T d2b4aa1           2 PFRVTLV----EDEPSHATLIQYHLNQLGAEVTVHPSGS-----------------------------AFFQHRSQLSTC   48 (118)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH-----------------------------HHHHTGGGGGSC
T ss_pred             CCEEEEE----ECCHHHHHHHHHHHHhcCCCeEEECCHH-----------------------------HHHHHHHhcCCC
Confidence            5789999    8999999999999999999988766433                             223334344457


Q ss_pred             cEEEeCCC-CChhhHHHHHHHHHhCC-CcEEEEecc
Q 018900          154 DVVLDNNG-KNLDAVRPVADWAKSSG-VKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~-~~~~~~~~ll~~a~~~g-v~~~i~~Ss  187 (349)
                      |+|+--.. .+.+|. .+++.+|+.+ -..+|++|+
T Consensus        49 dliilD~~lp~~~G~-el~~~ir~~~~~~pii~lt~   83 (118)
T d2b4aa1          49 DLLIVSDQLVDLSIF-SLLDIVKEQTKQPSVLILTT   83 (118)
T ss_dssp             SEEEEETTCTTSCHH-HHHHHHTTSSSCCEEEEEES
T ss_pred             CEEEEeCCCCCCCHH-HHHHHHHhcCCCCcEEEEEC
Confidence            88884333 334443 5666777654 246788875

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=91.11  E-value=0.34  Score=34.88  Aligned_cols=91  Identities=12%  Similarity=0.114  Sum_probs=56.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +..||||-    |-||..|+.-++++++-|-+|++-+...+....             ..++.++    ++++++.+..+
T Consensus         5 k~trVlvQ----GiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~-------------~~giPVf----~sV~eAv~~~~   63 (119)
T d2nu7a1           5 KNTKVICQ----GFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT-------------HLGLPVF----NTVREAVAATG   63 (119)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEE-------------ETTEEEE----SSHHHHHHHHC
T ss_pred             CCCcEEEE----cCCCcHHHHHHHHHHHhCCceEEEEccCCCCcc-------------cCCCchh----hHHHHHHHHhC
Confidence            45689999    999999999999999999999888876543321             1133333    33444444333


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +|+-+-+.... .....++|++ ++|++.+|-++
T Consensus        64 ~~~SvIfVPp~-~a~dA~~EAi-~agI~~iV~IT   95 (119)
T d2nu7a1          64 ATASVIYVPAP-FCKDSILEAI-DAGIKLIITIT   95 (119)
T ss_dssp             CCEEEECCCGG-GHHHHHHHHH-HTTCSEEEECC
T ss_pred             CCeEEEeccHH-HHHHHHHHHH-HCCCCEEEEec
Confidence            45433333322 2334555555 67998777554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=90.86  E-value=0.12  Score=40.16  Aligned_cols=95  Identities=19%  Similarity=0.175  Sum_probs=56.6

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCe-EEEcC---hhhHHhh
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAEVGNV  147 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~D---~~~l~~~  147 (349)
                      .+.+|||.    |+ |.+|...++.+...|. .|+++++++++.+.           ....+.+ ++..+   .+...+.
T Consensus        32 ~g~~vli~----Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~-----------~~~~ga~~~i~~~~~~~~~~~~~   95 (172)
T d1h2ba2          32 PGAYVAIV----GV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL-----------AERLGADHVVDARRDPVKQVMEL   95 (172)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH-----------HHHTTCSEEEETTSCHHHHHHHH
T ss_pred             CCCEEEEe----CC-ChHHHHHHHHHHhhcCcccccccchhHHHHH-----------HhhcccceeecCcccHHHHHHHh
Confidence            35689999    75 9999999988887775 66777776543321           1122222 23222   3334444


Q ss_pred             hcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       148 ~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ..+..+|+||.+.+... .....++.++..|  +++.++
T Consensus        96 ~~~~g~d~vid~~g~~~-~~~~a~~~l~~~G--~iv~~G  131 (172)
T d1h2ba2          96 TRGRGVNVAMDFVGSQA-TVDYTPYLLGRMG--RLIIVG  131 (172)
T ss_dssp             TTTCCEEEEEESSCCHH-HHHHGGGGEEEEE--EEEECC
T ss_pred             hCCCCceEEEEecCcch-HHHHHHHHHhCCC--EEEEEe
Confidence            45556899999998432 2333344444433  777655

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.80  E-value=0.085  Score=43.88  Aligned_cols=32  Identities=19%  Similarity=0.401  Sum_probs=29.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .|+|+     |.|.+|..++.+|.++|++|+++.+..
T Consensus         6 DvvII-----GaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVI-----GGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEE-----CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            49999     799999999999999999999999864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.63  E-value=0.12  Score=43.04  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=31.1

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .|||+|+     |.|.-|-..+.+|.+.|++|+++.+..
T Consensus         1 ~KkV~II-----GaG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVI-----GAGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4789999     799999999999999999999998764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.61  E-value=0.34  Score=37.50  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=34.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      +-.+|+|+|+    |-+..+|+-++..|.++|..|+......
T Consensus        36 ~l~Gk~vvVI----GrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVV----GRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEE----CCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEE----ecCCccchHHHHHHHhccCceEEEeccc
Confidence            3468999999    9999999999999999999999887654

>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: TorCAD operon transcriptional regulator TorD, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.58  E-value=0.85  Score=32.61  Aligned_cols=78  Identities=12%  Similarity=0.208  Sum_probs=53.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      +||||+    =-.-.+...+...|.+.||+|.....                              .++..+.+....+|
T Consensus         2 ~rILiV----DDd~~~~~~l~~~L~~~g~~v~~a~~------------------------------~~~a~~~~~~~~~d   47 (120)
T d1zgza1           2 HHIVIV----EDEPVTQARLQSYFTQEGYTVSVTAS------------------------------GAGLREIMQNQSVD   47 (120)
T ss_dssp             CEEEEE----CSSHHHHHHHHHHHHHTTCEEEEESS------------------------------HHHHHHHHHHSCCS
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEECC------------------------------HHHHHHHHHhcCCC
Confidence            589999    88889999999999999999875542                              23333445555688


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          155 VVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~-~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .|+--.. .+.++. .+++..+......+|.+|+
T Consensus        48 liilD~~mp~~~g~-~~~~~~~~~~~~piI~lt~   80 (120)
T d1zgza1          48 LILLDINLPDENGL-MLTRALRERSTVGIILVTG   80 (120)
T ss_dssp             EEEEESCCSSSCHH-HHHHHHHTTCCCEEEEEES
T ss_pred             EEeeehhhccchhH-HHHHHHhccCCCeEEEEEc
Confidence            8884322 334444 4566677666667888876

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=90.48  E-value=0.34  Score=38.17  Aligned_cols=36  Identities=17%  Similarity=0.083  Sum_probs=32.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      -..++|.|+     |.|.||+.+++.|..-|.+|.+.+|..
T Consensus        42 l~~~~vgii-----G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          42 LEAMHVGTV-----AAGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CTTCEEEEE-----CCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ccccceeec-----cccccchhhhhhhhccCceEEEEeecc
Confidence            357899999     799999999999999999999999865

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.37  E-value=0.22  Score=37.70  Aligned_cols=28  Identities=32%  Similarity=0.360  Sum_probs=26.1

Q ss_pred             CcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           85 GGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        85 GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      .|.||+|-.++..|.++|.+|+++.+..
T Consensus        47 ~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          47 ADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4789999999999999999999999875

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=90.31  E-value=0.8  Score=32.83  Aligned_cols=80  Identities=20%  Similarity=0.242  Sum_probs=50.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      |++||||+    =-.-.+...+.+.|.+.||+|.......                             +.++ .+....
T Consensus         1 M~krILiV----DDd~~~~~~l~~~L~~~g~~v~~a~~~~-----------------------------~al~-~l~~~~   46 (121)
T d1mvoa_           1 MNKKILVV----DDEESIVTLLQYNLERSGYDVITASDGE-----------------------------EALK-KAETEK   46 (121)
T ss_dssp             CCCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH-----------------------------HHHH-HHHHHC
T ss_pred             CCCCEEEE----ECCHHHHHHHHHHHHHCCCEEEEECCHH-----------------------------HHHH-HHhccc
Confidence            56789999    8888888889889989999987655432                             2222 333345


Q ss_pred             ccEEEeC-CCCChhhHHHHHHHHHhCC-CcEEEEecc
Q 018900          153 FDVVLDN-NGKNLDAVRPVADWAKSSG-VKQFLFISS  187 (349)
Q Consensus       153 ~d~Vi~~-a~~~~~~~~~ll~~a~~~g-v~~~i~~Ss  187 (349)
                      +|.|+-- --.+.+|. .++...+..+ ...+|.+++
T Consensus        47 ~dlillD~~mp~~~G~-~~~~~~r~~~~~~~ii~lt~   82 (121)
T d1mvoa_          47 PDLIVLDVMLPKLDGI-EVCKQLRQQKLMFPILMLTA   82 (121)
T ss_dssp             CSEEEEESSCSSSCHH-HHHHHHHHTTCCCCEEEEEC
T ss_pred             ccEEEecccccCCCCc-hhhhhhhccCCCCEEEEEEe
Confidence            8888832 22344554 3444455443 346777775

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=90.25  E-value=0.73  Score=32.88  Aligned_cols=78  Identities=22%  Similarity=0.239  Sum_probs=51.0

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |||||+    =-.-.+...+...|.+.||+|.......                              +.-+.+...++|
T Consensus         1 KrILiV----dDd~~~~~~l~~~L~~~g~~v~~a~~~~------------------------------eal~~~~~~~~d   46 (117)
T d2a9pa1           1 KKILIV----DDEKPISDIIKFNMTKEGYEVVTAFNGR------------------------------EALEQFEAEQPD   46 (117)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH------------------------------HHHHHHHHHCCS
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEECCHH------------------------------HHHHHHHhcCCC
Confidence            579999    8888888888899999999987654322                              222233334578


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          155 VVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~-~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .|+--.. .+.+|. .+++..++.+-..+|.+|+
T Consensus        47 lillD~~mp~~~G~-~~~~~i~~~~~~pvI~lt~   79 (117)
T d2a9pa1          47 IIILDLMLPEIDGL-EVAKTIRKTSSVPILMLSA   79 (117)
T ss_dssp             EEEECSSCSSSCHH-HHHHHHHTTCCCCEEEEES
T ss_pred             EEEeccccCCCCcc-HHHHHHHhCCCCCEEEEec
Confidence            8884332 344553 4555566655446777775

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=90.18  E-value=0.045  Score=42.67  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=33.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcc
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSD  116 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~  116 (349)
                      .+++|||.     |+|..|+.++..|.+.|. +|+++.|+.+...
T Consensus        16 ~~~~vlIl-----GaGGaarai~~aL~~~g~~~I~I~nR~~~ka~   55 (167)
T d1npya1          16 KNAKVIVH-----GSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQ   55 (167)
T ss_dssp             TTSCEEEE-----CSSTTHHHHHHHHHHTTCCCEEEECSCHHHHH
T ss_pred             CCCeEEEE-----CCCHHHHHHHHHHHHCCCCEEEEecccHHHHH
Confidence            46789999     569999999999999996 7999999875443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.99  E-value=0.13  Score=39.51  Aligned_cols=34  Identities=29%  Similarity=0.310  Sum_probs=29.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCC--eEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~--~V~~l~R~~  112 (349)
                      +|||+|+     |.|++|-.++.+|.+.++  +|+++.+.+
T Consensus         2 gkrivIv-----GgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVV-----GGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEE-----CccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            6899999     789999999999999875  788887654

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.96  E-value=0.39  Score=37.00  Aligned_cols=85  Identities=13%  Similarity=0.130  Sum_probs=49.4

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~  150 (349)
                      .+++|.|+    | .|++|+..++.|.+..  ..+.+.+.......  .     ...     +..     ..++++++..
T Consensus         6 ~k~kv~iI----G-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~--~-----~~~-----~~~-----~~~~~e~l~~   63 (172)
T d1lc0a1           6 GKFGVVVV----G-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL--G-----SLD-----EVR-----QISLEDALRS   63 (172)
T ss_dssp             CSEEEEEE----C-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC--C-----EET-----TEE-----BCCHHHHHHC
T ss_pred             CCcEEEEE----c-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHH--H-----Hhh-----ccC-----cCCHHHHHhC
Confidence            46799999    5 6999999888876532  12333332211100  0     000     111     1135566666


Q ss_pred             CCccEEEeCCC-------------------------CChhhHHHHHHHHHhCCC
Q 018900          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (349)
Q Consensus       151 ~~~d~Vi~~a~-------------------------~~~~~~~~ll~~a~~~gv  179 (349)
                      .++|+|+-+..                         .+++....+++++++.|.
T Consensus        64 ~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~  117 (172)
T d1lc0a1          64 QEIDVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR  117 (172)
T ss_dssp             SSEEEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred             CCcchhhhcccccccccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCC
Confidence            66788875544                         356778888888888775

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.87  E-value=2  Score=31.70  Aligned_cols=112  Identities=13%  Similarity=-0.004  Sum_probs=65.8

Q ss_pred             cceEEEEEe-cCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           73 EKKKVLIVN-TNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        73 ~~~~VLVt~-~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      +..||+|+| +.+|-|-.+...|++.|-+.|++|.+..-.....                       .|...+..-+.+.
T Consensus         2 ~~~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~~~~-----------------------~~~~~~~~~l~~~   58 (148)
T d1vmea1           2 KKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEER-----------------------PAISEILKDIPDS   58 (148)
T ss_dssp             CTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCC-----------------------CCHHHHHHHSTTC
T ss_pred             CCCEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEecccccc-----------------------cchhHhhhhHHHC
Confidence            345677775 4789999999999999999999988876543211                       1333444444444


Q ss_pred             CccEEEeCCCCC----hhhHHHHHHHHHhC--CCcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          152 TFDVVLDNNGKN----LDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       152 ~~d~Vi~~a~~~----~~~~~~ll~~a~~~--gv~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                        |.++......    ......+++.....  .-++++.++|   ||...+             .-....+.+.+.|.++
T Consensus        59 --d~iiigspt~~~~~~~~~~~~l~~~~~~~~~~k~~~~fgs---~g~~~~-------------a~~~~~~~l~~~G~~~  120 (148)
T d1vmea1          59 --EALIFGVSTYEAEIHPLMRFTLLEIIDKANYEKPVLVFGV---HGWAPS-------------AERTAGELLKETKFRI  120 (148)
T ss_dssp             --SEEEEEECEETTEECHHHHHHHHHHHHHCCCCCEEEEEEE---CCCCCC-------------C-CCHHHHHHTSSCEE
T ss_pred             --CEeEEEecccCCccCchHHHHHHHHhhcccCCCEEEEEEc---CCCccc-------------hHHHHHHHHHHcCCcE
Confidence              8877554421    12344555544332  3356666664   332211             1124567778887653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.78  E-value=0.21  Score=39.27  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=32.6

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ...+++|.|+     |.|.||+.+++.|..-|.+|.+.+|...
T Consensus        41 ~l~~k~vgii-----G~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          41 EIFGKTVGVV-----GLGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccceeeeec-----cccchhHHHHHHhhhccceEEeecCCCC
Confidence            3457889999     6999999999999999999999988653

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.64  E-value=0.12  Score=42.74  Aligned_cols=33  Identities=21%  Similarity=0.429  Sum_probs=30.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      |+|+|+     |+|..|-..+.+|.++|++|+++.++.
T Consensus         1 m~V~II-----GaG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVV-----GGGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEE-----CCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEE-----CCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            579999     569999999999999999999999865

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.42  E-value=0.19  Score=39.93  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=33.2

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      ...+++|.|+     |.|.||+.+++.|..-|.+|.+.++...
T Consensus        44 ~l~g~tvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIY-----GFGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             eecccceEEe-----ecccchHHHHHHHHhhcccccccccccc
Confidence            3457899999     8999999999999999999999987653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.30  E-value=0.22  Score=40.49  Aligned_cols=37  Identities=32%  Similarity=0.420  Sum_probs=33.3

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ....++|+|+     |.|..|-..+.+|.++|++|+++.+..
T Consensus        46 ~~~~k~VvII-----GaGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIV-----GAGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEE-----cccHHHHHHHHHHHHhccceeeEeecc
Confidence            3467899999     799999999999999999999998766

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=88.92  E-value=0.87  Score=34.61  Aligned_cols=36  Identities=17%  Similarity=0.074  Sum_probs=24.2

Q ss_pred             eEEEEEecCCCcccchHHH-HHHHHHhC-CCeEEEEEcCCCCc
Q 018900           75 KKVLIVNTNSGGHAVIGFY-LAKELLGS-GHEVTIMTVGDENS  115 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~-l~~~Ll~~-g~~V~~l~R~~~~~  115 (349)
                      +||.|+    | .|.+|+. .+..|.+. +.++++.+++++..
T Consensus         2 irvgii----G-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~   39 (167)
T d1xeaa1           2 LKIAMI----G-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVL   39 (167)
T ss_dssp             EEEEEE----C-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHH
T ss_pred             eEEEEE----c-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHH
Confidence            689999    5 6888865 45556554 46777777765443

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.78  E-value=0.32  Score=38.87  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=28.3

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      |||++.     |++..|..+++.|++.||+|.++...+
T Consensus         1 MkI~~~-----G~~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEE-----cCCHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            689999     677899999999999999998776544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=88.73  E-value=0.3  Score=37.91  Aligned_cols=98  Identities=12%  Similarity=0.096  Sum_probs=59.7

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEE----cC--hhh
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----GD--PAE  143 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~D--~~~  143 (349)
                      ...+.+|||.    |+ |-+|...++.+...|. +|+++++++++.+..           ...+.+.+.    .|  .+.
T Consensus        25 ~~~G~~VlV~----Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-----------~~lGa~~~i~~~~~d~~~~~   88 (174)
T d1p0fa2          25 VTPGSTCAVF----GL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-----------IELGATECLNPKDYDKPIYE   88 (174)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHH
T ss_pred             CCCCCEEEEE----CC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH-----------HHcCCcEEEcCCCchhHHHH
Confidence            3456789999    85 8999999999998885 788888876544321           122333332    12  233


Q ss_pred             HHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       144 l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      ......+..+|+||.+.+.. ....+.++.++. +-.++++++
T Consensus        89 ~~~~~~~~G~d~vid~~g~~-~~~~~~~~~~~~-~~G~~v~vG  129 (174)
T d1p0fa2          89 VICEKTNGGVDYAVECAGRI-ETMMNALQSTYC-GSGVTVVLG  129 (174)
T ss_dssp             HHHHHTTSCBSEEEECSCCH-HHHHHHHHTBCT-TTCEEEECC
T ss_pred             HHHHhcCCCCcEEEEcCCCc-hHHHHHHHHHHH-hcCceEEEE
Confidence            44444445689999998843 233333443333 224677655

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=88.26  E-value=0.22  Score=38.44  Aligned_cols=74  Identities=11%  Similarity=0.073  Sum_probs=43.9

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc------ChhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG------DPAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------D~~~l~  145 (349)
                      .+.+|||.    |+ |.+|...++.+...|. .|++.++++++.+..           ...+.+.+..      +.....
T Consensus        28 ~G~tVlI~----Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-----------k~lGa~~~i~~~~~~~~~~~~~   91 (176)
T d2fzwa2          28 PGSVCAVF----GL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-----------KEFGATECINPQDFSKPIQEVL   91 (176)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-----------HHHTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEe----cc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-----------HHhCCcEEEeCCchhhHHHHHH
Confidence            46789999    87 5689999998888886 566666655433211           1113322211      112222


Q ss_pred             hhhcCCCccEEEeCCCC
Q 018900          146 NVVGGVTFDVVLDNNGK  162 (349)
Q Consensus       146 ~~~~~~~~d~Vi~~a~~  162 (349)
                      +...+..+|+||.+.|.
T Consensus        92 ~~~~~~g~D~vid~~G~  108 (176)
T d2fzwa2          92 IEMTDGGVDYSFECIGN  108 (176)
T ss_dssp             HHHTTSCBSEEEECSCC
T ss_pred             HHHcCCCCcEeeecCCC
Confidence            23334468999999884

>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Aerobic respiration control protein ArcA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.00  E-value=1.7  Score=30.98  Aligned_cols=78  Identities=18%  Similarity=0.234  Sum_probs=52.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      .||||+    =-.=.+...+.+.|.+.||+|......                              ++.-+.+...++|
T Consensus         3 p~ILiV----DDd~~~~~~l~~~L~~~g~~v~~a~~~------------------------------~~al~~l~~~~~d   48 (121)
T d1xhfa1           3 PHILIV----EDELVTRNTLKSIFEAEGYDVFEATDG------------------------------AEMHQILSEYDIN   48 (121)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHTTTCEEEEESSH------------------------------HHHHHHHHHSCCS
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEECCh------------------------------HHHHHHHHhcCCC
Confidence            389999    888888899999999999998765432                              2222233344688


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          155 VVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~-~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      .|+--.. .+.+|. .+++..++..-..+|++|+
T Consensus        49 lii~D~~mp~~~G~-~~~~~~r~~~~~pii~lt~   81 (121)
T d1xhfa1          49 LVIMDINLPGKNGL-LLARELREQANVALMFLTG   81 (121)
T ss_dssp             EEEECSSCSSSCHH-HHHHHHHHHCCCEEEEEES
T ss_pred             EEEeecccCCccCc-HHHHHHHhcCCCcEEEEEC
Confidence            8885333 345553 5666666655557888886

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.97  E-value=0.26  Score=41.97  Aligned_cols=34  Identities=24%  Similarity=0.599  Sum_probs=24.6

Q ss_pred             eEEEEEecCCCcc-cch--HHHHHHHHHhCCCeEEEEEcC
Q 018900           75 KKVLIVNTNSGGH-AVI--GFYLAKELLGSGHEVTIMTVG  111 (349)
Q Consensus        75 ~~VLVt~~~~Ggt-G~i--G~~l~~~Ll~~g~~V~~l~R~  111 (349)
                      |||||+   +||| |.+  +..|+++|.++||+|..++..
T Consensus         1 kkili~---~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVM---AGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEE---CCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEE---cCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            578888   2344 444  446889999999999988753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.88  E-value=0.23  Score=38.26  Aligned_cols=67  Identities=18%  Similarity=0.223  Sum_probs=48.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+|+|+|+     |.|.+|+.+++.|...|-+|++..+++...-           +-.-++.++     ..+++++... 
T Consensus        23 ~Gk~v~V~-----GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al-----------~A~~dG~~v-----~~~~~a~~~a-   80 (163)
T d1li4a1          23 AGKVAVVA-----GYGDVGKGCAQALRGFGARVIITEIDPINAL-----------QAAMEGYEV-----TTMDEACQEG-   80 (163)
T ss_dssp             TTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHH-----------HHHHTTCEE-----CCHHHHTTTC-
T ss_pred             cCCEEEEe-----ccccccHHHHHHHHhCCCeeEeeecccchhH-----------HhhcCceEe-----eehhhhhhhc-
Confidence            47899999     8999999999999999999999998762211           111123332     2355566555 


Q ss_pred             ccEEEeCCCC
Q 018900          153 FDVVLDNNGK  162 (349)
Q Consensus       153 ~d~Vi~~a~~  162 (349)
                       |+||-+.|.
T Consensus        81 -divvtaTGn   89 (163)
T d1li4a1          81 -NIFVTTTGC   89 (163)
T ss_dssp             -SEEEECSSC
T ss_pred             -cEEEecCCC
Confidence             988888884

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.79  E-value=0.27  Score=42.26  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=31.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--CeEEEEEcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDE  113 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~~V~~l~R~~~  113 (349)
                      .+|||+|+     |.|..|-..+..|+++|  ++|+++.|+..
T Consensus         3 ~~KrVaII-----GaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAII-----GAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEE-----CCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEE-----CcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            57899999     78999999999999876  69999999763

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=87.34  E-value=1.5  Score=31.20  Aligned_cols=33  Identities=30%  Similarity=0.339  Sum_probs=27.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R  110 (349)
                      ++||||+    =-.-.+...+.+.|.+.||+|.....
T Consensus         1 GkrILiv----DD~~~~~~~l~~~L~~~g~~v~~~a~   33 (118)
T d1u0sy_           1 GKRVLIV----DDAAFMRMMLKDIITKAGYEVAGEAT   33 (118)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEE----eCCHHHHHHHHHHHHHcCCceEEEEC
Confidence            4789999    88888888888888888999876554

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=87.28  E-value=1.5  Score=31.48  Aligned_cols=91  Identities=16%  Similarity=0.194  Sum_probs=57.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +..||||-    |-||..|+.-+++.++-|-+|++-+...+.....             .++.++    ++++++.+..+
T Consensus         6 k~trVivQ----GiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~-------------~giPVf----~tV~eAv~~~~   64 (121)
T d1oi7a1           6 RETRVLVQ----GITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEV-------------LGVPVY----DTVKEAVAHHE   64 (121)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE-------------TTEEEE----SSHHHHHHHSC
T ss_pred             CCCcEEEE----cCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEE-------------ECCchH----hhHHHHHHhcC
Confidence            34589999    9999999999999999999998888766443221             133322    44455544444


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +|+-+-+... ......++|++ ++|++.+|-++
T Consensus        65 ~d~SvIfVPp-~~a~dAi~EAi-~agI~liv~IT   96 (121)
T d1oi7a1          65 VDASIIFVPA-PAAADAALEAA-HAGIPLIVLIT   96 (121)
T ss_dssp             CSEEEECCCH-HHHHHHHHHHH-HTTCSEEEECC
T ss_pred             CeEEEEeeCH-HHHHHHHHHHH-hCCCcEEEEec
Confidence            5654443331 12233445544 56887777554

>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain
species: Desulfovibrio gigas [TaxId: 879]

Probab=87.13  E-value=3.2  Score=30.57  Aligned_cols=108  Identities=14%  Similarity=0.087  Sum_probs=66.9

Q ss_pred             ceEEEEEe-cCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           74 KKKVLIVN-TNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        74 ~~~VLVt~-~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      ++||+|+| +.+|.|-.+...|++.|.+.|++|.++.-...                          |.+.....+.++ 
T Consensus         2 ~~Ki~IiY~S~tGnTe~~A~~Ia~~l~~~g~ev~~~~~~~~--------------------------~~~~~~~~l~~~-   54 (152)
T d1e5da1           2 TNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKAC--------------------------HHSQIMSEISDA-   54 (152)
T ss_dssp             CSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTS--------------------------CHHHHHHHHHTC-
T ss_pred             CCeEEEEEECCCcHHHHHHHHHHHHHhhCCCEEEEeecccC--------------------------ChhhhccchhhC-
Confidence            45788887 57999999999999999999999887765431                          333444444444 


Q ss_pred             ccEEEeCCCCC----hhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          153 FDVVLDNNGKN----LDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       153 ~d~Vi~~a~~~----~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                       |.|+--....    ......+++......  .+.+..+++   ||...+             .-...++.+.+.|.+.
T Consensus        55 -d~vi~Gspt~~~~~~~~~~~~l~~~~~~~~~~k~~~~fgs---~g~~~~-------------a~~~~~~~l~~~g~~~  116 (152)
T d1e5da1          55 -GAVIVGSPTHNNGILPYVAGTLQYIKGLRPQNKIGGAFGS---FGWSGE-------------STKVLAEWLTGMGFDM  116 (152)
T ss_dssp             -SEEEEECCCBTTBCCHHHHHHHHHHHHTCCCSCEEEEEEE---ESSSCH-------------HHHHHHHHHHHTTCBC
T ss_pred             -CEEEEeccccCCccCchhHHHHHHhhccCCCCCEEEEEEe---eCCCCc-------------cHHHHHHHHHHCCCEE
Confidence             8887544432    233566676665433  344444443   442211             2335677777777643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.09  E-value=0.68  Score=35.16  Aligned_cols=37  Identities=14%  Similarity=0.018  Sum_probs=25.0

Q ss_pred             ceEEEEEecCCCcccchHHH-HHHHHHhC-CCeEEEEE-cCCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFY-LAKELLGS-GHEVTIMT-VGDENS  115 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~-l~~~Ll~~-g~~V~~l~-R~~~~~  115 (349)
                      ++||.|+    | +|.+|.. .+..|.+. +.+++++. ++.+..
T Consensus         1 Kiri~iI----G-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~   40 (164)
T d1tlta1           1 KLRIGVV----G-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA   40 (164)
T ss_dssp             CEEEEEE----C-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH
T ss_pred             CCEEEEE----c-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhh
Confidence            4689999    5 7999975 45566554 67877665 555443

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.96  E-value=0.19  Score=42.07  Aligned_cols=35  Identities=26%  Similarity=0.357  Sum_probs=31.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      |+.+|+|+     |.|-.|..++..|.+.|++|+++.|.+
T Consensus         1 mk~~V~Iv-----GaGp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAII-----GAGPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEE-----CCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCEEEE-----CcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34479999     678999999999999999999999875

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.76  E-value=0.26  Score=41.81  Aligned_cols=34  Identities=24%  Similarity=0.318  Sum_probs=31.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      |..|+|+     |+|..|..+|+.|.+.|++|+++.+..
T Consensus         1 M~dv~II-----GaG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIV-----GSGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEE-----CCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            5689999     799999999999999999999998765

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.70  E-value=0.28  Score=37.73  Aligned_cols=35  Identities=40%  Similarity=0.509  Sum_probs=30.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      .++|+|+     |.|++|-.++..|.+.|.+|+++.+...
T Consensus         3 ~~~VvII-----GgG~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIV-----GTGLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEE-----CCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEE-----CCcHHHHHHHHHHHHcCCceEEEEecCc
Confidence            5789999     7999999999999999999888776553

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=86.60  E-value=0.36  Score=37.77  Aligned_cols=40  Identities=20%  Similarity=0.267  Sum_probs=34.6

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~  118 (349)
                      .-+|+|+     |.|..|.+-++..+..|.+|++++.+.+..+++
T Consensus        29 pa~VvVi-----GaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l   68 (183)
T d1l7da1          29 PARVLVF-----GVGVAGLQAIATAKRLGAVVMATDVRAATKEQV   68 (183)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CcEEEEE-----cCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH
Confidence            4589999     789999999999999999999999987655543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.38  E-value=0.11  Score=40.56  Aligned_cols=39  Identities=21%  Similarity=0.236  Sum_probs=32.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcc
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~  116 (349)
                      .++++|||.     |+|..++.++.+|.+.| +|+++.|+.+..+
T Consensus        16 ~~~k~vlIl-----GaGG~arai~~aL~~~~-~i~I~nR~~~ka~   54 (177)
T d1nvta1          16 VKDKNIVIY-----GAGGAARAVAFELAKDN-NIIIANRTVEKAE   54 (177)
T ss_dssp             CCSCEEEEE-----CCSHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred             cCCCEEEEE-----CCcHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence            467899999     56778999999997777 8999999875543

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=86.34  E-value=0.77  Score=36.42  Aligned_cols=35  Identities=23%  Similarity=0.292  Sum_probs=28.7

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ..|||++.     |++..+..+.+.|++.|++|.++...+
T Consensus         2 ~~mKI~f~-----G~~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           2 ESLRIIFA-----GTPDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCCEEEEE-----ECSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCcEEEEE-----CCCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            46789999     567889999999999999988776544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.83  E-value=0.31  Score=38.82  Aligned_cols=32  Identities=22%  Similarity=0.332  Sum_probs=29.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      -|+|+     |+|..|...|..|.++|++|.++.++.
T Consensus         7 DviVi-----GaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVL-----GTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEE-----CcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            48999     799999999999999999999999876

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=85.73  E-value=0.41  Score=38.13  Aligned_cols=73  Identities=19%  Similarity=0.205  Sum_probs=49.0

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      -.+++|+|-     |-|.+|+++++.|.+.|.+|++.+.+.+...           .....+.+.+  +.   ++++. .
T Consensus        25 L~gk~v~Iq-----G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~-----------~~~~~g~~~~--~~---~~~~~-~   82 (201)
T d1c1da1          25 LDGLTVLVQ-----GLGAVGGSLASLAAEAGAQLLVADTDTERVA-----------HAVALGHTAV--AL---EDVLS-T   82 (201)
T ss_dssp             STTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHH-----------HHHHTTCEEC--CG---GGGGG-C
T ss_pred             CCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEecchHHHHH-----------HHHhhccccc--Cc---ccccc-c
Confidence            467899999     6999999999999999999998876543222           1112233322  22   22332 2


Q ss_pred             CccEEEeCCCCChhh
Q 018900          152 TFDVVLDNNGKNLDA  166 (349)
Q Consensus       152 ~~d~Vi~~a~~~~~~  166 (349)
                      ++|+++-||..+..-
T Consensus        83 ~~DI~iPcA~~~~I~   97 (201)
T d1c1da1          83 PCDVFAPCAMGGVIT   97 (201)
T ss_dssp             CCSEEEECSCSCCBC
T ss_pred             cceeeeccccccccc
Confidence            469999988766543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.70  E-value=0.41  Score=40.05  Aligned_cols=35  Identities=34%  Similarity=0.576  Sum_probs=31.1

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      +..||+|+     |.|.-|-..+.+|.++|++|+++-...
T Consensus         4 ~~~kViVI-----GaG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIII-----GSGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEE-----CCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEE-----CCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            45689999     799999999999999999999997654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=85.44  E-value=0.17  Score=39.37  Aligned_cols=35  Identities=29%  Similarity=0.403  Sum_probs=29.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      |+.+|+|+     |.|++|-.++..|.+.|+++.++.+..
T Consensus         2 m~a~VvII-----GgG~~G~e~A~~l~~~g~~v~i~~~~~   36 (183)
T d1d7ya1           2 LKAPVVVL-----GAGLASVSFVAELRQAGYQGLITVVGD   36 (183)
T ss_dssp             CCSSEEEE-----CCSHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred             CCCCEEEE-----CccHHHHHHHHHHHhcCCceEEEEEec
Confidence            55679999     699999999999999998877666544

>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Escherichia coli [TaxId: 562]

Probab=85.37  E-value=2.8  Score=29.67  Aligned_cols=78  Identities=13%  Similarity=0.057  Sum_probs=50.8

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      |||||+    =-.-.+...+...|.+.||+|......                              ++.-+.++...+|
T Consensus         1 KkILiV----DD~~~~~~~l~~~L~~~g~~v~~a~~~------------------------------~~al~~l~~~~~d   46 (121)
T d1zesa1           1 RRILVV----EDEAPIREMVCFVLEQNGFQPVEAEDY------------------------------DSAVNQLNEPWPD   46 (121)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEECSH------------------------------HHHHHHSSSSCCS
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEECCh------------------------------HHHHHHHHccCCC
Confidence            689999    888888999999999999998765432                              2233344555688


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhCC---CcEEEEecc
Q 018900          155 VVLDNNG-KNLDAVRPVADWAKSSG---VKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~-~~~~~~~~ll~~a~~~g---v~~~i~~Ss  187 (349)
                      .|+--.. .+.+|. .+++..++..   .-.+|++|+
T Consensus        47 lil~D~~mp~~~G~-~l~~~lr~~~~~~~~pvi~lt~   82 (121)
T d1zesa1          47 LILLDWMLPGGSGI-QFIKHLKRESMTRDIPVVMLTA   82 (121)
T ss_dssp             EEEECSSCTTSCHH-HHHHHHHHSTTTTTSCEEEEES
T ss_pred             EEEeecCCCCCCHH-HHHHHHHhCccCCCCeEEEEEC
Confidence            8874333 344443 4556665532   236788875

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.37  E-value=1.6  Score=31.68  Aligned_cols=91  Identities=13%  Similarity=0.058  Sum_probs=56.2

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      +..||||-    |-||..|+.-++++++-|-+|++-+...+.....             .++.++    ++++++.+..+
T Consensus        14 k~TrVivQ----GiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~-------------~giPVf----~tV~eA~~~~~   72 (130)
T d1euca1          14 KNTKVICQ----GFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTH-------------LGLPVF----NTVKEAKEQTG   72 (130)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE-------------TTEEEE----SSHHHHHHHHC
T ss_pred             CCCeEEEE----cCCCcHHHHHHHHHHHhcCCeEEeeccCCCCccc-------------cCccch----hhHHHHHHhcC
Confidence            45689999    9999999999999999999999888765433211             133322    33444444334


Q ss_pred             ccEEEeCCCCChhhHHHHHHHHHhCCCcEEEEec
Q 018900          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (349)
Q Consensus       153 ~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~~S  186 (349)
                      +|+-+-+... ......++|++ ++|++.+|-++
T Consensus        73 ~daSvIfVPp-~~a~dAi~EAi-~agI~liV~IT  104 (130)
T d1euca1          73 ATASVIYVPP-PFAAAAINEAI-DAEVPLVVCIT  104 (130)
T ss_dssp             CCEEEECCCH-HHHHHHHHHHH-HTTCSEEEECC
T ss_pred             CcEEEEecCH-HHHHHHHHHHH-hCCCCEEEEec
Confidence            4554433221 12233445554 47887777554

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.04  E-value=0.33  Score=40.77  Aligned_cols=32  Identities=31%  Similarity=0.706  Sum_probs=29.1

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~  112 (349)
                      +|+|+     |.|.+|..++.+|.++|+ +|+++.|+.
T Consensus         3 dViII-----GaGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVII-----GAGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEE-----CCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEE-----CcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            69999     789999999999999996 799999875

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.94  E-value=0.65  Score=33.18  Aligned_cols=35  Identities=26%  Similarity=0.309  Sum_probs=27.9

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHH---hCCCeEEEEEcCCC
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELL---GSGHEVTIMTVGDE  113 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll---~~g~~V~~l~R~~~  113 (349)
                      .++|+|+    | .|++|-.++..|.   .+|.+|+++.|.+.
T Consensus        20 p~~v~iv----G-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTV----G-GGFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEE----C-SSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEE----C-CcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            5789999    5 5999999996554   45678999998763

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.76  E-value=0.4  Score=37.59  Aligned_cols=33  Identities=30%  Similarity=0.470  Sum_probs=28.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhC--CCeEEEEEcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~--g~~V~~l~R~~  112 (349)
                      |||+|+     |.|++|-.++..|.+.  +.+|+++.|..
T Consensus         1 ~KVvII-----GgG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVL-----GSSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEE-----CSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEE-----CCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            689999     6889999999999876  46899888765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.68  E-value=0.37  Score=39.88  Aligned_cols=33  Identities=21%  Similarity=0.335  Sum_probs=30.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      --|+|+     |.|..|..++.+|.++|++|+++.+..
T Consensus         4 yDvvII-----GaGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           4 FDVIVV-----GAGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CCEEEE-----CcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            359999     799999999999999999999999864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.36  E-value=0.49  Score=35.77  Aligned_cols=31  Identities=45%  Similarity=0.546  Sum_probs=26.8

Q ss_pred             EEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCC
Q 018900           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (349)
Q Consensus        76 ~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~  112 (349)
                      ||+|+     |.|++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvII-----GgG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIV-----GNGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEE-----CCcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            79999     78999999999884 578999998754

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.78  E-value=0.067  Score=43.43  Aligned_cols=26  Identities=31%  Similarity=0.445  Sum_probs=23.6

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeE
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV  105 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V  105 (349)
                      |||+|+     |.|.+|..+|.+|.++|++|
T Consensus         1 mkV~VI-----GaGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVI-----GAGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEE-----CchHHHHHHHHHHHHCCCCc
Confidence            689999     79999999999999999754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=83.50  E-value=0.77  Score=35.11  Aligned_cols=75  Identities=15%  Similarity=0.180  Sum_probs=46.3

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCC-CeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEc--C----hhhH
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D----PAEV  144 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--D----~~~l  144 (349)
                      ..+.+|+|+    |+.| +|...+..+...| .+|++++++++..+.           ....+.+.+..  +    .+..
T Consensus        27 k~g~~VlI~----G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~-----------a~~~GAd~~in~~~~~~~~~~~   90 (175)
T d1cdoa2          27 EPGSTCAVF----GLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEK-----------AKVFGATDFVNPNDHSEPISQV   90 (175)
T ss_dssp             CTTCEEEEE----CCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHH-----------HHHTTCCEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----ecCC-ccchHHHHHHHHhhchheeecchHHHHHH-----------HHHcCCcEEEcCCCcchhHHHH
Confidence            356789999    8655 7777776776665 578888887754432           22223333321  1    2344


Q ss_pred             HhhhcCCCccEEEeCCCC
Q 018900          145 GNVVGGVTFDVVLDNNGK  162 (349)
Q Consensus       145 ~~~~~~~~~d~Vi~~a~~  162 (349)
                      .....+.++|+|+.+.|.
T Consensus        91 ~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          91 LSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             HHHHHTSCBSEEEECSCC
T ss_pred             HHhhccCCcceeeeecCC
Confidence            445555568999999884

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.40  E-value=5.1  Score=28.32  Aligned_cols=78  Identities=22%  Similarity=0.324  Sum_probs=48.5

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      .+|||+    ==.-.+...+.+.|.+.||+|.......                              +.-+.+....+|
T Consensus         4 ~~ILIV----DDd~~~~~~l~~~L~~~g~~v~~a~~~~------------------------------~a~~~l~~~~~d   49 (123)
T d1krwa_           4 GIVWVV----DDDSSIRWVLERALAGAGLTCTTFENGN------------------------------EVLAALASKTPD   49 (123)
T ss_dssp             CEEEEE----SSSHHHHHHHHHHHHHTTCEEEEESSSH------------------------------HHHHHHTTCCCS
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEeCCHH------------------------------HHHHHHHhCCCC
Confidence            479999    8888888888888888899987654332                              233344555678


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhC-CCcEEEEecc
Q 018900          155 VVLDNNG-KNLDAVRPVADWAKSS-GVKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~-~~~~~~~~ll~~a~~~-gv~~~i~~Ss  187 (349)
                      .|+--.. .+.+|.. +++.+++. ..-.+|++|+
T Consensus        50 lii~D~~mp~~~G~e-l~~~l~~~~~~~piI~~t~   83 (123)
T d1krwa_          50 VLLSDIRMPGMDGLA-LLKQIKQRHPMLPVIIMTA   83 (123)
T ss_dssp             EEEECCSSSSSTTHH-HHHHHHHHSSSCCEEESCC
T ss_pred             EEEehhhcCCchHHH-HHHHHHHhCCCCeEEEEec
Confidence            8874322 3344433 34444333 3336777775

>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Probable two-component system transcriptional regulator Rv1626
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.06  E-value=2.1  Score=33.12  Aligned_cols=80  Identities=20%  Similarity=0.195  Sum_probs=49.2

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      +.||||+    ==.=.+-..+...|.+.||+|+....+.                             ++.-+.+....+
T Consensus         3 p~kILiV----DD~~~~r~~l~~~L~~~g~~vv~~a~~g-----------------------------~eal~~~~~~~p   49 (190)
T d1s8na_           3 PRRVLIA----EDEALIRMDLAEMLREEGYEIVGEAGDG-----------------------------QEAVELAELHKP   49 (190)
T ss_dssp             CCEEEEE----CSSHHHHHHHHHHHHHTTCEEEEEESSH-----------------------------HHHHHHHHHHCC
T ss_pred             CCEEEEE----eCCHHHHHHHHHHHHHCCCEEEEEECCH-----------------------------HHHHHHHhcCCC
Confidence            4678888    5555556666666667788887666543                             223334445568


Q ss_pred             cEEEeCCC-CChhhHHHHHHHHHhCCCcEEEEecc
Q 018900          154 DVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~-~~~~~~~~ll~~a~~~gv~~~i~~Ss  187 (349)
                      |.|+--.. .+.+|. .+++..++.+..+||.+|+
T Consensus        50 DlvllDi~mP~~dG~-e~~~~ir~~~~~pIi~lTa   83 (190)
T d1s8na_          50 DLVIMDVKMPRRDGI-DAASEIASKRIAPIVVLTA   83 (190)
T ss_dssp             SEEEEESSCSSSCHH-HHHHHHHHTTCSCEEEEEE
T ss_pred             CEEEEeccccCcchH-HHHHHHHhcCCCCEEEEeC
Confidence            99884322 344553 5555556555557888886

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.89  E-value=2.5  Score=32.10  Aligned_cols=102  Identities=10%  Similarity=0.072  Sum_probs=51.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCC--C--eEEEEEcCCCCccc---CCCCCCCcccceecCCCeEEEcChhhHH
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--H--EVTIMTVGDENSDK---MKKPPFNRFNEIVSAGGKTVWGDPAEVG  145 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g--~--~V~~l~R~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~D~~~l~  145 (349)
                      ++.+|.|.     |.|.+|+.++++|.++.  .  +|.++.......-.   +.......+..... .......+.+.+.
T Consensus         3 k~i~I~l~-----G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~   76 (168)
T d1ebfa1           3 KVVNVAVI-----GAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALA-ASTTKTLPLDDLI   76 (168)
T ss_dssp             SEEEEEEE-----CCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHH-TCCCBCCCHHHHH
T ss_pred             CEEEEEEE-----eCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhh-hcccccccHHHHH
Confidence            46789999     89999999999999763  3  45555543221110   00000011111100 0011111344555


Q ss_pred             hhhcCC-CccEEEeCCCCChhhHHHHHHHHHhCCCcEEE
Q 018900          146 NVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (349)
Q Consensus       146 ~~~~~~-~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i  183 (349)
                      ..+... ..++++.+.+-. +.. ..+..+-+.|. ++|
T Consensus        77 ~~~~~~~~~~vivd~t~~~-~~~-~~~~~aL~~G~-hVV  112 (168)
T d1ebfa1          77 AHLKTSPKPVILVDNTSSA-YIA-GFYTKFVENGI-SIA  112 (168)
T ss_dssp             HHHTTCSSCEEEEECSCCH-HHH-TTHHHHHHTTC-EEE
T ss_pred             HHhccCCCceEEEEecCCh-HHH-HHHHHHHHcCC-eEE
Confidence            544443 367888776633 223 33344556674 777

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.87  E-value=1.2  Score=34.19  Aligned_cols=37  Identities=24%  Similarity=0.301  Sum_probs=33.0

Q ss_pred             cccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcC
Q 018900           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (349)
Q Consensus        71 ~~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~  111 (349)
                      +..+|+|+|+    |-+.-+|+-++..|+++|..|+.....
T Consensus        26 ~l~GK~vvVI----GrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          26 RLYGKKCIVI----NRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTTTCEEEEE----CCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCEEEEE----CCccccHHHHHHHHHHCCCEEEEeccc
Confidence            5578999999    999999999999999999999877654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=82.81  E-value=2.3  Score=32.48  Aligned_cols=100  Identities=24%  Similarity=0.297  Sum_probs=55.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCC-----CCCCCccc-ceec---------CCCeEEEc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-----KPPFNRFN-EIVS---------AGGKTVWG  139 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~-----~~~~~~~~-~l~~---------~~~~~~~~  139 (349)
                      +||.|=     |=|.||+.+.+.|.+++.+|+++.-.. ..+.+.     ..-..+|. .+..         ..+.+...
T Consensus         1 ikigIN-----GfGRIGR~~~R~l~~~~i~iv~INd~~-~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~   74 (168)
T d2g82a1           1 MKVGIN-----GFGRIGRQVFRILHSRGVEVALINDLT-DNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV   74 (168)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHTCCEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECC
T ss_pred             CEEEEE-----CCcHHHHHHHHHHhcCCCEEEEECCCc-chhhhhheeecccccCccccccccccceeEecceeEEEEec
Confidence            478888     799999999999999999998886421 111110     00000111 0000         01111111


Q ss_pred             -ChhhHHhhhcCCCccEEEeCCCCChhhHHHHHHHHHhCCCcEEEE
Q 018900          140 -DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (349)
Q Consensus       140 -D~~~l~~~~~~~~~d~Vi~~a~~~~~~~~~ll~~a~~~gv~~~i~  184 (349)
                       |++++.  ..+.++|+|+.|.|.....  ..++.-.+.|++|+|.
T Consensus        75 ~~p~~i~--W~~~gvdiViEcTG~f~~~--~~~~~hl~~gakkVii  116 (168)
T d2g82a1          75 KDPKEIP--WAEAGVGVVIESTGVFTDA--DKAKAHLEGGAKKVII  116 (168)
T ss_dssp             SSGGGCC--TGGGTEEEEEECSSSCCBH--HHHTHHHHTTCSEEEE
T ss_pred             CChHHCc--ccccCCceeEeccccccch--HHhhhhhccccceeee
Confidence             244333  2334579999999965432  2333333468988887

>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.78  E-value=4.7  Score=28.46  Aligned_cols=79  Identities=19%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      ++||||+    =-.-.+...+.+.|.+.||+|.......                              +.-+.+....+
T Consensus         1 nirILiV----dDd~~~~~~l~~~L~~~g~~v~~a~~~~------------------------------~al~~l~~~~~   46 (122)
T d1kgsa2           1 NVRVLVV----EDERDLADLITEALKKEMFTVDVCYDGE------------------------------EGMYMALNEPF   46 (122)
T ss_dssp             CCEEEEE----CSSHHHHHHHHHHHHHTTCEEEEESSHH------------------------------HHHHHHHHSCC
T ss_pred             CCEEEEE----eCCHHHHHHHHHHHHHCCCEEEEEcchH------------------------------HHHHHHHhhCc
Confidence            3689999    8888888889899989999987654322                              22223344568


Q ss_pred             cEEEeCCC-CChhhHHHHHHHHHhCC-CcEEEEecc
Q 018900          154 DVVLDNNG-KNLDAVRPVADWAKSSG-VKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~-~~~~~~~~ll~~a~~~g-v~~~i~~Ss  187 (349)
                      |.|+--.. .+.+|. .+++.+++.+ ...+|.+|+
T Consensus        47 dlillD~~mp~~~g~-~~~~~lr~~~~~~piI~lt~   81 (122)
T d1kgsa2          47 DVVILDIMLPVHDGW-EILKSMRESGVNTPVLMLTA   81 (122)
T ss_dssp             SEEEEESCCSSSCHH-HHHHHHHHTTCCCCEEEEES
T ss_pred             cccccccccccchhH-HHHHHHHhcCCCCcEEEEcC
Confidence            88884322 444453 4445555544 346777775

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.72  E-value=1  Score=32.01  Aligned_cols=37  Identities=27%  Similarity=0.307  Sum_probs=29.8

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHH---hCCCeEEEEEcCCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELL---GSGHEVTIMTVGDEN  114 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll---~~g~~V~~l~R~~~~  114 (349)
                      .+++|+|+     |.|++|-.++..|.   ..|.+|+++.|.+.-
T Consensus        17 ~p~~v~Ii-----GgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          17 APKRALCV-----GGGYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CCSEEEEE-----CSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             cCCeEEEE-----CCChHHHHHHHHhHhhcccccccceecccccc
Confidence            35789999     78999999997654   348899999997643

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.70  E-value=0.72  Score=38.98  Aligned_cols=37  Identities=27%  Similarity=0.478  Sum_probs=32.7

Q ss_pred             ccceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCC
Q 018900           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (349)
Q Consensus        72 ~~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~  113 (349)
                      +....|+|+     |.|..|-..+.+|.+.|.+|+++.+.++
T Consensus         5 ~~~~dV~II-----GAG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           5 PEEVDVLVV-----GAGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             CSEEEEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCCCEEEE-----CccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            356689999     7899999999999999999999998753

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.39  E-value=0.41  Score=39.35  Aligned_cols=100  Identities=10%  Similarity=0.040  Sum_probs=57.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      .++|+|. .+.|-+|.=|..++++|.++|++|.++........+..   ...+..+...++.....+...........+.
T Consensus        55 ~~~vlil-~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (243)
T d1jzta_          55 GKHVFVI-AGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFY---KQLVHQLNFFKVPVLSQDEGNWLEYLKPEKT  130 (243)
T ss_dssp             TCEEEEE-ECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHH---HHHHHHHHHTTCCEECSSTTCGGGGGSTTTE
T ss_pred             CCeEEEE-ECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHH---HHHHHHHHHCCCceecccccchhhccccccc
Confidence            4578887 56677888899999999999999988865542221110   0111222333455554443333333344457


Q ss_pred             cEEEeC-CCC----C-hhhHHHHHHHHHhC
Q 018900          154 DVVLDN-NGK----N-LDAVRPVADWAKSS  177 (349)
Q Consensus       154 d~Vi~~-a~~----~-~~~~~~ll~~a~~~  177 (349)
                      |+||++ -|.    . -.....+++++.+.
T Consensus       131 d~iVDal~G~Gl~~~l~~~~~~li~~iN~~  160 (243)
T d1jzta_         131 LCIVDAIFGFSFKPPMREPFKGIVEELCKV  160 (243)
T ss_dssp             EEEEEESCCTTCCSSCCTTHHHHHHHHHHH
T ss_pred             cEEEEeeecccccCcccHHHHHHHHHHHHh
Confidence            888874 221    1 23466777777653

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.06  E-value=5.4  Score=28.02  Aligned_cols=79  Identities=18%  Similarity=0.232  Sum_probs=47.3

Q ss_pred             ceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      ++||||+    =-.-.+-..+.+.|...||+|.......                             +.+ +.+...++
T Consensus         1 NkrILvV----DD~~~~~~~l~~~L~~~g~~v~~a~~g~-----------------------------eal-~~~~~~~~   46 (119)
T d1peya_           1 NEKILIV----DDQSGIRILLNEVFNKEGYQTFQAANGL-----------------------------QAL-DIVTKERP   46 (119)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH-----------------------------HHH-HHHHHHCC
T ss_pred             CCEEEEE----eCCHHHHHHHHHHHHHcCCEEEEeCCHH-----------------------------HHH-HHHHhCCC
Confidence            4689999    7777777778888888899987544222                             222 23344457


Q ss_pred             cEEEeCCC-CChhhHHHHHHHHHhCC-CcEEEEecc
Q 018900          154 DVVLDNNG-KNLDAVRPVADWAKSSG-VKQFLFISS  187 (349)
Q Consensus       154 d~Vi~~a~-~~~~~~~~ll~~a~~~g-v~~~i~~Ss  187 (349)
                      |.|+--.. .+.+|. .+++.+++.. -.++|++|+
T Consensus        47 dlillD~~mP~~~G~-el~~~lr~~~~~~pvi~lt~   81 (119)
T d1peya_          47 DLVLLDMKIPGMDGI-EILKRMKVIDENIRVIIMTA   81 (119)
T ss_dssp             SEEEEESCCTTCCHH-HHHHHHHHHCTTCEEEEEES
T ss_pred             CEEEEeccCCCCCHH-HHHHHHHHhCCCCcEEEEec
Confidence            88874222 334443 4444444432 347888885

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.01  E-value=0.18  Score=38.07  Aligned_cols=32  Identities=9%  Similarity=0.077  Sum_probs=21.7

Q ss_pred             cccchHHHHHHHHHhCCCeEEEEEcCCCCccc
Q 018900           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (349)
Q Consensus        86 gtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~  117 (349)
                      |+|.+|+.+++.|.+.++.+.+..|+.++.++
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~   37 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARN   37 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHH
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcc
Confidence            79999999999875544444678888765543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=80.96  E-value=0.54  Score=35.96  Aligned_cols=67  Identities=22%  Similarity=0.252  Sum_probs=49.0

Q ss_pred             cceEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCC
Q 018900           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (349)
Q Consensus        73 ~~~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~  152 (349)
                      .+|+++|.     |-|++|+.+++.|...|.+|+++.+++-.+-           +-.-++.++     ..+++++... 
T Consensus        22 aGk~vvV~-----GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~al-----------qA~mdGf~v-----~~~~~a~~~a-   79 (163)
T d1v8ba1          22 SGKIVVIC-----GYGDVGKGCASSMKGLGARVYITEIDPICAI-----------QAVMEGFNV-----VTLDEIVDKG-   79 (163)
T ss_dssp             TTSEEEEE-----CCSHHHHHHHHHHHHHTCEEEEECSCHHHHH-----------HHHTTTCEE-----CCHHHHTTTC-
T ss_pred             cCCEEEEe-----cccccchhHHHHHHhCCCEEEEEecCchhhH-----------HHHhcCCcc-----CchhHccccC-
Confidence            47899999     8999999999999999999999998762211           111234433     3355666665 


Q ss_pred             ccEEEeCCCC
Q 018900          153 FDVVLDNNGK  162 (349)
Q Consensus       153 ~d~Vi~~a~~  162 (349)
                       |++|-..|.
T Consensus        80 -Di~vTaTGn   88 (163)
T d1v8ba1          80 -DFFITCTGN   88 (163)
T ss_dssp             -SEEEECCSS
T ss_pred             -cEEEEcCCC
Confidence             999988884

>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Escherichia coli [TaxId: 562]

Probab=80.95  E-value=5.7  Score=27.88  Aligned_cols=78  Identities=18%  Similarity=0.264  Sum_probs=50.1

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCcc
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~d  154 (349)
                      +||||+    =-.-.+...+.+.|...||+|.......                              +.-..+....+|
T Consensus         1 mrILvV----DDd~~~~~~l~~~L~~~G~~v~~a~~g~------------------------------eal~~l~~~~~d   46 (119)
T d2pl1a1           1 MRVLVV----EDNALLRHHLKVQIQDAGHQVDDAEDAK------------------------------EADYYLNEHIPD   46 (119)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESSHH------------------------------HHHHHHHHSCCS
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEECCHH------------------------------HHHHHHHhcccc
Confidence            579999    8888899999999999999987554322                              222234445578


Q ss_pred             EEEeCCC-CChhhHHHHHHHHHhCC-CcEEEEecc
Q 018900          155 VVLDNNG-KNLDAVRPVADWAKSSG-VKQFLFISS  187 (349)
Q Consensus       155 ~Vi~~a~-~~~~~~~~ll~~a~~~g-v~~~i~~Ss  187 (349)
                      .|+---. .+.+|. .+++.+++.+ -..+|.+|+
T Consensus        47 liilD~~mP~~~G~-e~~~~i~~~~~~~pvi~lt~   80 (119)
T d2pl1a1          47 IAIVDLGLPDEDGL-SLIRRWRSNDVSLPILVLTA   80 (119)
T ss_dssp             EEEECSCCSSSCHH-HHHHHHHHTTCCSCEEEEES
T ss_pred             eeehhccCCCchhH-HHHHHHHhcCcccceEeeec
Confidence            8874333 345554 4555555543 335777765

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.90  E-value=0.91  Score=36.91  Aligned_cols=34  Identities=29%  Similarity=0.420  Sum_probs=30.2

Q ss_pred             eEEEEEecCCCcccchHHHHHHHHHhCCC-eEEEEEcCCC
Q 018900           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDE  113 (349)
Q Consensus        75 ~~VLVt~~~~GgtG~iG~~l~~~Ll~~g~-~V~~l~R~~~  113 (349)
                      ++|+|+     |.|..|..++..|.+.|. +|+++.|.++
T Consensus         2 ~~V~Iv-----GaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIA-----GAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEE-----CcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            689999     789999999999999994 8999988653

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=80.85  E-value=3.6  Score=30.09  Aligned_cols=85  Identities=14%  Similarity=0.210  Sum_probs=53.4

Q ss_pred             ceEEEEEecCCCccc-chHHHHHHHHHh-CCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCC
Q 018900           74 KKKVLIVNTNSGGHA-VIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (349)
Q Consensus        74 ~~~VLVt~~~~GgtG-~iG~~l~~~Ll~-~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~  151 (349)
                      ++||+++ |= |+.+ -+|..++..+++ .||+|+-+..+.                           -.+++-++..+.
T Consensus         3 k~kVvi~-~~-~gD~H~lG~~mva~~l~~~G~~V~~LG~~~---------------------------p~e~iv~a~~~~   53 (137)
T d1ccwa_           3 KKTIVLG-VI-GSDCHAVGNKILDHAFTNAGFNVVNIGVLS---------------------------PQELFIKAAIET   53 (137)
T ss_dssp             CCEEEEE-EE-TTCCCCHHHHHHHHHHHHTTCEEEEEEEEE---------------------------CHHHHHHHHHHH
T ss_pred             CCEEEEE-ec-CCChhHHHHHHHHHHHHHCCCeEEeccccc---------------------------CHHHHHHHHHhc
Confidence            4577775 11 2222 478888876654 699998887543                           235566666666


Q ss_pred             CccEEEeC--CCCChhhHHHHHHHHHhCCCc-EEEEecc
Q 018900          152 TFDVVLDN--NGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (349)
Q Consensus       152 ~~d~Vi~~--a~~~~~~~~~ll~~a~~~gv~-~~i~~Ss  187 (349)
                      ++|+|.-.  .+......+.+++.+++.+.+ --|+++.
T Consensus        54 ~~d~v~lS~~~~~~~~~~~~~~~~l~~~~~~~i~iivGG   92 (137)
T d1ccwa_          54 KADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGG   92 (137)
T ss_dssp             TCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEE
T ss_pred             CCCEEEEeeccccchHHHHHHHHHHHHhccCCCEEEEeC
Confidence            68888743  334566777888888877642 2355554

>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Nitric oxide reductase C-terminal domain
species: Moorella thermoacetica [TaxId: 1525]

Probab=80.79  E-value=4.1  Score=29.78  Aligned_cols=107  Identities=18%  Similarity=0.115  Sum_probs=65.9

Q ss_pred             eEEEEEec-CCCcccchHHHHHHHHHhCCCeEEEEEcCCCCcccCCCCCCCcccceecCCCeEEEcChhhHHhhhcCCCc
Q 018900           75 KKVLIVNT-NSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (349)
Q Consensus        75 ~~VLVt~~-~~GgtG~iG~~l~~~Ll~~g~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~~~~~~~D~~~l~~~~~~~~~  153 (349)
                      .||||+|. .+|.|-.+...|++.|.+.|.+|..+.-...                          +.+++...+.++  
T Consensus         3 ~K~lIvY~S~~GnT~~vA~~Ia~~l~~~g~~v~~~~~~~~--------------------------~~~~~~~~~~~~--   54 (149)
T d1ycga1           3 AKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSVS--------------------------DRNDVIKEILDA--   54 (149)
T ss_dssp             SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGS--------------------------CHHHHHHHHHHC--
T ss_pred             cEEEEEEECCCcHHHHHHHHHHHHHHhcCCeeEEEEcccc--------------------------chHHHhhhhhhC--
Confidence            57888884 6899999999999999999999887764321                          334444334444  


Q ss_pred             cEEEeCCCCC----hhhHHHHHHHHHhCC--CcEEEEeccccccCCCCCCCCCCCCCCCCCCChHHHHHHHHhhCCcE
Q 018900          154 DVVLDNNGKN----LDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (349)
Q Consensus       154 d~Vi~~a~~~----~~~~~~ll~~a~~~g--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~~~~k~~~ek~~~~~~~~~  225 (349)
                      |.||--....    ....+.+++.++...  .+.+..+.+   ||...+             .-...++.+++.|...
T Consensus        55 d~ii~Gspt~~g~~~~~~~~~l~~l~~~~~~~k~~~~fgs---~g~~g~-------------a~~~l~~~l~~~g~~~  116 (149)
T d1ycga1          55 RAVLVGSPTINNDILPVVSPLLDDLVGLRPKNKVGLAFGA---YGWGGG-------------AQKILEERLKAAKIEL  116 (149)
T ss_dssp             SEEEEECCCBTTBCCGGGHHHHHHHHHHCCSSCEEEEEEE---ESSSCC-------------HHHHHHHHHHHTTCEE
T ss_pred             CeEEEEeecccCCCCHHHHHHHHHHhccccCCCEEEEEec---ccCCch-------------hHHHHHHHHHHCCCEE
Confidence            8888544422    234567777665432  344444443   433211             2345677777777654

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=80.28  E-value=0.54  Score=41.17  Aligned_cols=36  Identities=33%  Similarity=0.408  Sum_probs=26.5

Q ss_pred             eEEEEEec-----CCCcccchHHHHHHHHHhCCCeEEEEEc
Q 018900           75 KKVLIVNT-----NSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (349)
Q Consensus        75 ~~VLVt~~-----~~GgtG~iG~~l~~~Ll~~g~~V~~l~R  110 (349)
                      ||||++..     .+||-|-.-..|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            67787611     1355555567789999999999999974