Citrus Sinensis ID: 019012
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 347 | 2.2.26 [Sep-21-2011] | |||||||
| Q39173 | 343 | NADP-dependent alkenal do | no | no | 0.974 | 0.985 | 0.600 | 1e-118 | |
| Q39172 | 345 | NADP-dependent alkenal do | no | no | 0.974 | 0.979 | 0.595 | 1e-117 | |
| Q6WAU0 | 342 | (+)-pulegone reductase OS | N/A | no | 0.971 | 0.985 | 0.573 | 1e-111 | |
| Q9C0Y6 | 349 | Zinc-type alcohol dehydro | yes | no | 0.982 | 0.977 | 0.408 | 1e-65 | |
| O34812 | 339 | Putative NADP-dependent o | yes | no | 0.919 | 0.941 | 0.424 | 5e-64 | |
| P76113 | 345 | NADPH-dependent curcumin | N/A | no | 0.959 | 0.965 | 0.398 | 2e-60 | |
| Q3SZJ4 | 329 | Prostaglandin reductase 1 | yes | no | 0.927 | 0.978 | 0.401 | 5e-58 | |
| Q9EQZ5 | 329 | Prostaglandin reductase 1 | yes | no | 0.913 | 0.963 | 0.400 | 7e-58 | |
| P97584 | 329 | Prostaglandin reductase 1 | yes | no | 0.927 | 0.978 | 0.386 | 5e-57 | |
| Q91YR9 | 329 | Prostaglandin reductase 1 | yes | no | 0.925 | 0.975 | 0.394 | 8e-57 |
| >sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2 | Back alignment and function desciption |
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Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/343 (60%), Positives = 265/343 (77%), Gaps = 5/343 (1%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM-RSS 65
NKQVIF+ ++ G PKE+D + ++L+ P+GS S LVKNLYLSCDPYMR RM +
Sbjct: 4 NKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKS--VLVKNLYLSCDPYMRSRMGKPD 61
Query: 66 FTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-KIQ 124
+S+ + PG+P+ G+GVS+V++S +P++K GDL+ G+ GWEEYS+I + KIQ
Sbjct: 62 PSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQ 121
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
+PLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQ AK+ GCY
Sbjct: 122 -HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCY 180
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVGSAGS +KVDLLK K GFD+AFNY +E+DL AALKRCFP+GID+YF+NVGG+MLDA L
Sbjct: 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVL 240
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
LNM HGRIAVCGM+S ++ + +G+HNL ++ KRI ++GF+ +D+ YP+FL+ V+
Sbjct: 241 LNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300
Query: 305 NYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
K+GKI YVED+ +GLE AP A VGLF GKNVGKQVV +A E
Sbjct: 301 RIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343
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Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4 |
| >sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1 | Back alignment and function description |
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Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 265/344 (77%), Gaps = 6/344 (1%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM--RS 64
NKQVI + Y+ G P E+D + + ++L+ P+G++S LVKNLYLSCDPYMR RM
Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNS--VLVKNLYLSCDPYMRIRMGKPD 62
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRK-TEQLRKI 123
T++ + PGQP++G+GVS++++S +P++K GDL+ G+ WEEYS+I T KI
Sbjct: 63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 124 QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
Q +PLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQLAK+ GC
Sbjct: 123 Q-HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC 181
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243
YVVGSAGS +KVDLLK K GFD+AFNY +E+DL AALKRCFP GIDIYF+NVGG+MLDA
Sbjct: 182 YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAV 241
Query: 244 LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVI 303
L+NM HGRIAVCGM+S ++ + +G+HNL ++ KRI ++GF+ SD+ Y +FL++V+
Sbjct: 242 LVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVL 301
Query: 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ ++GKI YVED+ +GLE AP A VGLF GKNVGKQVV VA E
Sbjct: 302 PHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
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Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1 | Back alignment and function description |
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Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 262/347 (75%), Gaps = 10/347 (2%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V NKQ++ YI G+ K++D+ ++ S I ++ P G + GA LVKNLYLS +PY+ RM
Sbjct: 2 VMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCN-GAILVKNLYLSVNPYLILRM-- 58
Query: 65 SFTSSYIPPF---VPGQPVEGFGVSKVVDSDNPNFKPGDLVAG-LTGWEEYSLIRKTEQL 120
IP F +PG + +GVSKV+DS +P+++ G+L+ G GWEEY+LI+ L
Sbjct: 59 --GKLDIPQFDSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNL 116
Query: 121 RKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
KIQ D +PLSY++G+LGMPG TAYAGF E+CSPK GE VFV+AA+G+VGQLVGQ AK+
Sbjct: 117 FKIQ-DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKM 175
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GCYVVGSAGS +KVDLLKNK GFD+AFNY +E+D ALKR FP+GIDIYFDNVGG+ML
Sbjct: 176 FGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKML 235
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
+A + NMR HGRIAVCGMVS +S P+G+HNL L+ K+I M+GF+ DY HLYP+FL+
Sbjct: 236 EAVINNMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLE 295
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
V+ K+GK+ YVED++EGLE+AP+A +G++ G+NVG QVV V+ E
Sbjct: 296 MVLPRIKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342
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Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH. Mentha piperita (taxid: 34256) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 8 EC: 1 |
| >sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1 | Back alignment and function description |
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Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 209/350 (59%), Gaps = 9/350 (2%)
Query: 5 VENKQVIFRGYIE---GAPKETD-MEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRG 60
V N VI + Y++ G P + + + L+ + + L+KN+Y S DPY+R
Sbjct: 2 VSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLENAQVDEETPVLLKNIYTSVDPYLRM 61
Query: 61 RMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQ- 119
RM+S +SYIPP G+P V+KVV S +KPG V ++GWEEY+ + K
Sbjct: 62 RMQSPKHASYIPPLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQALG 121
Query: 120 -LRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178
L+ I + +PL +G LGMP TAY G + PK+GE +++SAASGAVGQ+ GQLA
Sbjct: 122 FLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLA 181
Query: 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238
K G +VVGS GS +K + + G+D FNY E+ AL R P+GIDIYF+NVGGE
Sbjct: 182 KAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPF-KALPRLCPKGIDIYFENVGGE 239
Query: 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLY-PR 297
+DA L NM GRI CG +S ++ +P + NL ++ K +T++GF+ ++ L Y +
Sbjct: 240 TMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQEQ 299
Query: 298 FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ + + +GKI Y D+ +GLE+AP AF+G+ GKN GK +V++A E
Sbjct: 300 YFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1 | Back alignment and function description |
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Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 193/332 (58%), Gaps = 13/332 (3%)
Query: 17 EGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVP 76
+G P D + I + PK G LVK LY+S DPYMRGRM+ T SY+ PF
Sbjct: 15 QGIPVHEDF--RFETIPVPEPK---QGEVLVKTLYVSVDPYMRGRMQD--TKSYVEPFAL 67
Query: 77 GQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIG 136
+ + G +++VV SD + K GD+V G W+E+S + ++ LRKI P S ++G
Sbjct: 68 DKALSGGVIAEVV-SDGNHLKKGDIVIGNLSWQEFSAVSES-ALRKIDT-SLAPASAYLG 124
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
+LGM G TAY G ++ PK GE V VS A+GAVG VGQ+AK+ G VVG AGS +K+D
Sbjct: 125 ILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKID 184
Query: 197 LLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVC 256
LK +L FDEA NY D+ AL+ P G+D+YFDNVGG + DA + + + RI VC
Sbjct: 185 YLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVC 244
Query: 257 GMVS---LHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY 313
G +S S D G L+ + M+GF+ SDY + + K GK+ Y
Sbjct: 245 GAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLKAGKLHY 304
Query: 314 VEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
E + EG EN P AF+GLF G+N GKQ+++V+
Sbjct: 305 EETITEGFENIPDAFLGLFKGENKGKQLIKVS 336
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Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3 | Back alignment and function description |
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Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 202/349 (57%), Gaps = 16/349 (4%)
Query: 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM 62
++ N++ + GAP + ++ + G L++ +YLS DPYMRGRM
Sbjct: 4 QKQRNRRWVLASRPHGAPVPENFRLEEDDVATPG-----EGQVLLRTVYLSLDPYMRGRM 58
Query: 63 RSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRK 122
S SY PP G + G VS+VV+S++P+++ GD V G +GW++Y I + L K
Sbjct: 59 --SDEPSYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYD-ISSGDDLVK 115
Query: 123 IQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
+ DH S+ +G+LGMPGFTAY G ++ PK GE + V+AA+G VG VGQ+ KL G
Sbjct: 116 LG-DHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKG 174
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
C VVG AG ++K LGFD +++ + D L + P+GIDIY++NVGG++ DA
Sbjct: 175 CRVVGVAGGAEKCRHATEVLGFDVCLDHHAD-DFAEQLAKACPKGIDIYYENVGGKVFDA 233
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHD-PQGIHNL----FTLVTKRITMKGF-LQSDYLHLYP 296
L + RI VCG+VS ++ + P G L T++ KRI ++GF + DY H
Sbjct: 234 VLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIH 293
Query: 297 RFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
F + K+ KI Y E++ +GLENAP F+GL GKN GK V+RVA
Sbjct: 294 EFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342
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Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: n EC: 3 |
| >sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1 | Back alignment and function description |
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Score = 225 bits (573), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 195/344 (56%), Gaps = 22/344 (6%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V K + + G P +D E+K ++ P D G L++ LYL+ DPYMR +S
Sbjct: 2 VHAKSWTLKKHFVGYPTNSDFELK----TVELPPLKD-GEVLLEALYLTVDPYMRIMAKS 56
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKI- 123
G + G V++VV+S N F G +V +GW +S I E+L K+
Sbjct: 57 ---------LKEGDMMMGEQVARVVESKNSAFPTGTIVLAPSGWTTHS-ISNGEKLEKVL 106
Query: 124 --QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
PD +PLS +G +GMPG TAY G ++C K GE V VSAA+GAVG +VGQ+AKL
Sbjct: 107 AEWPDT-LPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLK 165
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GC VVG+AGS +KV LK K GFD A NY L ALK P+G D YFDNVGGE +
Sbjct: 166 GCKVVGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSN 224
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIH-NLFTLVTKRITMKGFLQSDYL-HLYPRFL 299
A+ M+ GRIA+CG +S+++ P + ++ K + ++GF+ + + + L
Sbjct: 225 VAITQMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKAL 284
Query: 300 DYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
++ +GKI Y E + EG EN PAAF+GL G+N+GK +V+
Sbjct: 285 RDLLKWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIVK 328
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Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (571), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 202/347 (58%), Gaps = 30/347 (8%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + +G P ++D E+K ++L K +G L++ L+LS DPYMR +
Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKT--VELPPLK---NGEVLLEALFLSVDPYMRIASKR 56
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLI--RKTEQLRK 122
G + G V++VV+S N F G +V +GW + + + E+L
Sbjct: 57 ---------LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLT 107
Query: 123 IQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
PD +PLS +G +GMPG TAY G EVC K GE V VSAA+GAVG +VGQ+AKL G
Sbjct: 108 EWPDK-LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKG 166
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
C VVG+AGS +K+ LK ++GFD AFNY L ALK+ P G D YFDNVGGE L+
Sbjct: 167 CKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNT 225
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHD--PQGIHNLFTLVTKRITMKGFL----QSDYLHLYP 296
L M+D G+IA+CG +S+++ D P G + +++ K++ ++GF+ Q D
Sbjct: 226 VLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKAL 284
Query: 297 R-FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
R + +V+ +GKI Y E + +G EN PAAF+ + +G N+GK VV
Sbjct: 285 RDLMKWVL----EGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 327
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Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Cavia porcellus (taxid: 10141) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 221 bits (564), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 197/344 (57%), Gaps = 22/344 (6%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + EG P +++ E++ + + ++G L++ L+LS DPYMR +
Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELRTTEL-----PPLNNGEVLLEALFLSVDPYMRVAAKK 56
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKI- 123
G + G V++VV+S N F G +V L GW +S I LRK+
Sbjct: 57 ---------LKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHS-ISDGNGLRKLP 106
Query: 124 --QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
PD +PLS +G +GMPG TAY G ++C K GE V V+AA+GAVG +VGQ+AKL
Sbjct: 107 AEWPDK-LPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLK 165
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GC VVG+AGS +KV LK KLGFD AFNY L AL+ P G D YFDNVGGE +
Sbjct: 166 GCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSN 224
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDP-QGIHNLFTLVTKRITMKGFLQSDYL-HLYPRFL 299
+L M+ GRIA+CG +S ++ P + ++ +++ M+GF+ + + + + L
Sbjct: 225 TVILQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKAL 284
Query: 300 DYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
+++ +GKI Y E + EG E PAAF+G+ G N+GK +V+
Sbjct: 285 TDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIVK 328
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 221 bits (562), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 198/345 (57%), Gaps = 24/345 (6%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + EG P + + E+K + + ++G L++ L+LS DPYMR +
Sbjct: 2 VQAKSWTLKKHFEGFPTDGNFELKTTEL-----PPLNNGEVLLEALFLSVDPYMRVAAKK 56
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKI- 123
G + G V++VV+S N F G +VA L GW +S I L K+
Sbjct: 57 ---------LKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHS-ISDGNGLTKLP 106
Query: 124 --QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
PD +PLS +G +GMPG TAY G ++C K GE V VSAA+GAVG +VGQ+AKL
Sbjct: 107 VEWPDK-LPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLK 165
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GC VVG+AGS +KV LK KLGFD AFNY L AL+ P G D YFDNVGGE +
Sbjct: 166 GCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSN 224
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHD--PQGIHNLFTLVTKRITMKGFLQSDYL-HLYPRF 298
A +L M+ GRIA+CG +S ++ PQG ++ +++ M+GF+ + + + +
Sbjct: 225 AVILQMKTFGRIAICGAISQYNRTGPCPQGPAPE-VVIYQQLRMEGFIVNRWQGEVRQKA 283
Query: 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
L +++ +GK+ E + EG E PAAF+G+ G+N+GK +V+
Sbjct: 284 LTELMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIVK 328
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 347 | ||||||
| 224109164 | 344 | predicted protein [Populus trichocarpa] | 0.982 | 0.991 | 0.788 | 1e-155 | |
| 363814360 | 348 | uncharacterized protein LOC100813036 [Gl | 0.982 | 0.979 | 0.779 | 1e-153 | |
| 359495882 | 357 | PREDICTED: NADP-dependent alkenal double | 0.988 | 0.960 | 0.765 | 1e-152 | |
| 147772122 | 346 | hypothetical protein VITISV_015352 [Viti | 0.988 | 0.991 | 0.765 | 1e-151 | |
| 388500994 | 346 | unknown [Medicago truncatula] | 0.991 | 0.994 | 0.757 | 1e-150 | |
| 255547428 | 348 | alcohol dehydrogenase, putative [Ricinus | 0.979 | 0.977 | 0.750 | 1e-147 | |
| 449470267 | 343 | PREDICTED: NADP-dependent alkenal double | 0.979 | 0.991 | 0.727 | 1e-143 | |
| 414879283 | 622 | TPA: putative alcohol dehydrogenase supe | 0.974 | 0.543 | 0.706 | 1e-139 | |
| 223948709 | 506 | unknown [Zea mays] | 0.974 | 0.667 | 0.706 | 1e-139 | |
| 194702138 | 350 | unknown [Zea mays] gi|414879282|tpg|DAA5 | 0.974 | 0.965 | 0.706 | 1e-139 |
| >gi|224109164|ref|XP_002315107.1| predicted protein [Populus trichocarpa] gi|222864147|gb|EEF01278.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/345 (78%), Positives = 309/345 (89%), Gaps = 4/345 (1%)
Query: 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM 62
E V+NKQVIF+G+I+ P+ETDME+KI I+LKAPKGS GAFLVKNLYLSCDPYMRGRM
Sbjct: 4 ETVDNKQVIFKGFIDRIPRETDMELKIGKIELKAPKGS--GAFLVKNLYLSCDPYMRGRM 61
Query: 63 RSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRK 122
R + SYIPPFVPGQ ++GFGVSKVVDSD+P+FKPGDLV+GLTGWEE+SL+RK EQLR+
Sbjct: 62 RE-YYDSYIPPFVPGQAIQGFGVSKVVDSDDPDFKPGDLVSGLTGWEEFSLMRKHEQLRR 120
Query: 123 IQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
IQ D IPLSYH+GLLGM GFTAYAGF+EVCSP+ GE VFVSAASGAVGQLVGQLAKLHG
Sbjct: 121 IQQDD-IPLSYHVGLLGMAGFTAYAGFYEVCSPEIGENVFVSAASGAVGQLVGQLAKLHG 179
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
CYVVGSAG+SQKVD+LKNKLGFD+AFNY +E DL AALKR FP+GIDIYFDNVGG+ML+A
Sbjct: 180 CYVVGSAGTSQKVDILKNKLGFDQAFNYKEEPDLNAALKRYFPEGIDIYFDNVGGDMLEA 239
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYV 302
ALLNMR HGRIAVCGMVS +S +GIHNLF+L+ KRI M+GFLQSDYLHLYPRF + V
Sbjct: 240 ALLNMRIHGRIAVCGMVSSNSLSVSKGIHNLFSLIAKRIRMQGFLQSDYLHLYPRFFENV 299
Query: 303 ISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+SNYKQGKIVY+EDM+EGLE+APAA VGLFSGKNVGKQV+ VA E
Sbjct: 300 VSNYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVICVARE 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363814360|ref|NP_001242819.1| uncharacterized protein LOC100813036 [Glycine max] gi|255635011|gb|ACU17864.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/344 (77%), Positives = 298/344 (86%), Gaps = 3/344 (0%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKI-SGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMR 63
++NK+V+F+GYI+G PKETDME+K+ S I LK P S A LVKNLYLSCDPYMRGRMR
Sbjct: 7 LQNKRVLFKGYIDGVPKETDMELKVDSHIALKPPP-QGSSAILVKNLYLSCDPYMRGRMR 65
Query: 64 SSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKI 123
F SYIPPF+P Q +EGFGVSKV+ SDNPN+KPGD + G TGWEEYSLI++TEQLRKI
Sbjct: 66 D-FHGSYIPPFLPAQALEGFGVSKVIHSDNPNYKPGDFITGFTGWEEYSLIQRTEQLRKI 124
Query: 124 QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
PD IPLS+H+GLLGMPGFTAYAGF+EV +P GEYVFVSAASGAVGQLVGQLAKLHGC
Sbjct: 125 HPDDAIPLSFHVGLLGMPGFTAYAGFYEVSTPSKGEYVFVSAASGAVGQLVGQLAKLHGC 184
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243
YVVGSAGS +KVDLLKNKLGFDEAFNY +E DL AAL+R FPQGIDIYFDNVGG+MLDAA
Sbjct: 185 YVVGSAGSKEKVDLLKNKLGFDEAFNYKEELDLNAALQRYFPQGIDIYFDNVGGDMLDAA 244
Query: 244 LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVI 303
LLNMR HGRIAVCGMVS S P GI+NLF L+TKRI M+GFLQSDYLHLYPRFL+ V
Sbjct: 245 LLNMRIHGRIAVCGMVSQQSLSKPIGIYNLFNLITKRIKMQGFLQSDYLHLYPRFLEDVS 304
Query: 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
S YKQGKIVY+EDMNEGLE+APAAFVGLF GKNVGKQV+RVA E
Sbjct: 305 SYYKQGKIVYIEDMNEGLESAPAAFVGLFHGKNVGKQVIRVAHE 348
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495882|ref|XP_003635107.1| PREDICTED: NADP-dependent alkenal double bond reductase P2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/349 (76%), Positives = 303/349 (86%), Gaps = 6/349 (1%)
Query: 2 MEQVE--NKQVIFRGYIEGAPKETDMEIKI-SGIQLKAPKGSDSGAFLVKNLYLSCDPYM 58
MEQ E NKQ+I + Y + PKETD+E++ + I+LK PKGS GAFLVKNLYLSCDPYM
Sbjct: 12 MEQTEVGNKQIILKNYTDQIPKETDLELRHGNKIKLKVPKGS--GAFLVKNLYLSCDPYM 69
Query: 59 RGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTE 118
RGRMR F SY+PPF PG +EGFGVS+VVDSDNPNFKPGDL+AG+TGWEEYSLI +T+
Sbjct: 70 RGRMRD-FHDSYLPPFTPGSVIEGFGVSRVVDSDNPNFKPGDLIAGVTGWEEYSLIYRTQ 128
Query: 119 QLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178
QLRKIQ IPLS+H+GLLGMPGFTAYAGF+EVCSP+ GE V VSAASGAVGQLVGQLA
Sbjct: 129 QLRKIQHQDDIPLSFHVGLLGMPGFTAYAGFYEVCSPQKGETVLVSAASGAVGQLVGQLA 188
Query: 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238
KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY +E +L AALKR FP+GIDI+FDNVGG+
Sbjct: 189 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPNLDAALKRYFPKGIDIFFDNVGGD 248
Query: 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRF 298
MLDAALLNMR HGRIA+CGMVS S +PQGIHN++ L+TKRITMKGFLQSDYLHL+PRF
Sbjct: 249 MLDAALLNMRIHGRIAICGMVSQTSLSNPQGIHNMYALITKRITMKGFLQSDYLHLFPRF 308
Query: 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
++ V YKQGKIVY+EDMN+ LE+APAAFVGLFSGKNVGKQV+ VA E
Sbjct: 309 VEDVSCYYKQGKIVYIEDMNQALESAPAAFVGLFSGKNVGKQVICVAPE 357
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147772122|emb|CAN62492.1| hypothetical protein VITISV_015352 [Vitis vinifera] gi|296083400|emb|CBI23355.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/349 (76%), Positives = 303/349 (86%), Gaps = 6/349 (1%)
Query: 2 MEQVE--NKQVIFRGYIEGAPKETDMEIKI-SGIQLKAPKGSDSGAFLVKNLYLSCDPYM 58
MEQ E NKQ+I + Y + PKETD+E++ + I+LK PKGS GAFLVKNLYLSCDPYM
Sbjct: 1 MEQTEVGNKQIILKNYTDQIPKETDLELRHGNKIKLKVPKGS--GAFLVKNLYLSCDPYM 58
Query: 59 RGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTE 118
RGRMR F SY+PPF PG +EGFGVS+VVDSDNPNFKPGDL+AG+TGWEEYSLI +T+
Sbjct: 59 RGRMRD-FHDSYLPPFTPGSVIEGFGVSRVVDSDNPNFKPGDLIAGVTGWEEYSLIYRTQ 117
Query: 119 QLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178
QLRKIQ IPLS+H+GLLGMPGFTAYAGF+EVCSP+ GE V VSAASGAVGQLVGQLA
Sbjct: 118 QLRKIQHQDDIPLSFHVGLLGMPGFTAYAGFYEVCSPQKGETVLVSAASGAVGQLVGQLA 177
Query: 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238
KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY +E +L AALKR FP+GIDI+FDNVGG+
Sbjct: 178 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPNLDAALKRYFPKGIDIFFDNVGGD 237
Query: 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRF 298
MLDAALLNMR HGRIA+CGMVS S +PQGIHN++ L+TKRITMKGFLQSDYLHL+PRF
Sbjct: 238 MLDAALLNMRIHGRIAICGMVSQTSLSNPQGIHNMYALITKRITMKGFLQSDYLHLFPRF 297
Query: 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
++ V YKQGKIVY+EDMN+ LE+APAAFVGLFSGKNVGKQV+ VA E
Sbjct: 298 VEDVSCYYKQGKIVYIEDMNQALESAPAAFVGLFSGKNVGKQVICVAPE 346
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500994|gb|AFK38563.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/346 (75%), Positives = 299/346 (86%), Gaps = 2/346 (0%)
Query: 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGR 61
+ +V NKQVIF+GYI+G PKETDME+ S ++ + S A LVKNLYLSCDPYMRGR
Sbjct: 3 VSEVGNKQVIFKGYIDGIPKETDMELNFSN-NIQFNQQLPSQALLVKNLYLSCDPYMRGR 61
Query: 62 MRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR 121
MR F SYIPPF+P + +EGFGVSKV+ SDNPNFK G ++G TGWEEYS+I KT+QLR
Sbjct: 62 MRD-FHGSYIPPFLPSKALEGFGVSKVIQSDNPNFKAGHYISGFTGWEEYSIITKTDQLR 120
Query: 122 KIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
KI+PD HIPLS+H+GLLGMPGFTAYAGF+EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH
Sbjct: 121 KIEPDDHIPLSFHLGLLGMPGFTAYAGFYEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 180
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GCYVVGSAGS +KV+LLK+KLGFDEAFNY +E DL AALKR FP+GIDIYFDNVGG+MLD
Sbjct: 181 GCYVVGSAGSKEKVELLKSKLGFDEAFNYKEELDLDAALKRYFPEGIDIYFDNVGGDMLD 240
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDY 301
AALLNM+ HGRIAVCGM+S S DP+GIHNL +L+ KRI M+GFLQSDYL+LYP+FL+
Sbjct: 241 AALLNMKIHGRIAVCGMISQQSISDPKGIHNLSSLIYKRIRMQGFLQSDYLNLYPKFLEQ 300
Query: 302 VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
V S YKQGKIVY EDMNEGLE+APAAFVGLF GKNVGKQV+RVA E
Sbjct: 301 VSSFYKQGKIVYFEDMNEGLESAPAAFVGLFLGKNVGKQVIRVAHE 346
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547428|ref|XP_002514771.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223545822|gb|EEF47325.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/345 (75%), Positives = 299/345 (86%), Gaps = 5/345 (1%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKI-SGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMR 63
VEN+QVIF+GYIEG+PKETDME+++ + I+L PK GAFLVKNLYLSCDPYMRGRMR
Sbjct: 7 VENRQVIFKGYIEGSPKETDMEVRVGNKIELMLPK--PCGAFLVKNLYLSCDPYMRGRMR 64
Query: 64 SSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLI-RKTEQLRK 122
+ SYIPPFVPGQP++GFG+SKVV SDNP+FKPGD ++G T WEEYS I ++QLR
Sbjct: 65 D-YHHSYIPPFVPGQPIQGFGISKVVASDNPDFKPGDFLSGFTTWEEYSFIPYNSDQLRS 123
Query: 123 IQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
IQ IPLS H+GLLGMPG TAYAGF+EVCSPK G+YVFVSAASGAVGQLVGQ AKLHG
Sbjct: 124 IQLHDDIPLSLHLGLLGMPGLTAYAGFYEVCSPKKGDYVFVSAASGAVGQLVGQFAKLHG 183
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
CYVVGSAG+SQKVDLLKNK GFDEAFNY +E +L AALKR FP+GIDIYFDNVGG+MLDA
Sbjct: 184 CYVVGSAGTSQKVDLLKNKFGFDEAFNYKEEPNLDAALKRYFPEGIDIYFDNVGGDMLDA 243
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYV 302
ALLNM+ HG+IAVCGM+S++S +GIHNLF L++KRI M+GFLQSDYLHLYP+FL+ V
Sbjct: 244 ALLNMKIHGKIAVCGMMSVNSLSATRGIHNLFNLISKRIRMQGFLQSDYLHLYPQFLEQV 303
Query: 303 ISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ YKQGKIVY+EDMNEGLE+APAAF GLFSGKNVGKQV+RVA E
Sbjct: 304 SNYYKQGKIVYIEDMNEGLESAPAAFAGLFSGKNVGKQVIRVAYE 348
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449470267|ref|XP_004152839.1| PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/345 (72%), Positives = 298/345 (86%), Gaps = 5/345 (1%)
Query: 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGR 61
M +VENKQVIF+GYI+G P+ D E+KI ++L+APKGS G FLVKNL+LSCDPYMRGR
Sbjct: 1 MAEVENKQVIFKGYIDGVPQLGDFELKIGKLKLEAPKGS--GGFLVKNLFLSCDPYMRGR 58
Query: 62 MRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRK-TEQL 120
MR + SYI PF+PGQP+EGFGV++VVDSD+ NFKPGD+++G+T WE+YSLI K + QL
Sbjct: 59 MRD-YHDSYIHPFLPGQPIEGFGVAEVVDSDDSNFKPGDIISGITRWEDYSLINKGSIQL 117
Query: 121 RKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
RK++PD +PLS+H+GLLGMPGFTAYAGF EVCSPK +YVFVSAASGAVGQLVGQLAKL
Sbjct: 118 RKVEPDD-LPLSFHVGLLGMPGFTAYAGFFEVCSPKKSDYVFVSAASGAVGQLVGQLAKL 176
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
HGCYVVGSAG+ +KVD+LKNKLGFDEAFNY +E+DL A LKR FP GIDIYFDNVGG+ML
Sbjct: 177 HGCYVVGSAGTKEKVDILKNKLGFDEAFNYKEESDLNATLKRYFPNGIDIYFDNVGGDML 236
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
DAAL NMR HGRIA+CG++S +S +P+GI NL+ L+ KR+ MKGFLQSDYLHL+PRF +
Sbjct: 237 DAALCNMRVHGRIAICGVISQNSISNPKGISNLWNLIPKRVNMKGFLQSDYLHLFPRFYE 296
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
V + YKQGKIVYVED+ EGLENAPAAFVGLFSG N+GKQVV VA
Sbjct: 297 EVSNYYKQGKIVYVEDIKEGLENAPAAFVGLFSGDNLGKQVVCVA 341
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414879283|tpg|DAA56414.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/341 (70%), Positives = 284/341 (83%), Gaps = 3/341 (0%)
Query: 6 ENKQVIFRGYIEGAPKETDMEIKISG-IQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
N++V+ RGYI+ AP+E DME+ G ++L+ P+G A LVKNLYLSCDPYMRGRMR
Sbjct: 282 RNRKVVLRGYIDRAPREEDMELVDGGAVELRVPEGGGGPAVLVKNLYLSCDPYMRGRMRD 341
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
F +SYIPPF PG P+EGFGV +VVDS +P F GD+V+G+TGWE+YSLI K EQLRKIQ
Sbjct: 342 -FRNSYIPPFKPGSPIEGFGVGRVVDSTHPGFSAGDVVSGMTGWEDYSLITKPEQLRKIQ 400
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
IPLSYH+GLLGMPGFTAY GF+E+CSPK GE+VFVSAASGAVGQ+VGQLAKLHGCY
Sbjct: 401 -QSDIPLSYHLGLLGMPGFTAYVGFYEICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCY 459
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVGSAG+ QKV+LLK K GFD AFNY +E DL AALKR FP+GIDIYF+NVGG MLDA L
Sbjct: 460 VVGSAGTDQKVELLKEKFGFDAAFNYKEEPDLTAALKRHFPEGIDIYFENVGGPMLDAVL 519
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
LNMR HGRIAVCGMVS H P GIHNLF+L++KRI MKGF+QSDY+HL+P+F+D +
Sbjct: 520 LNMRVHGRIAVCGMVSQHGVTAPAGIHNLFSLISKRIEMKGFIQSDYVHLFPQFVDDITR 579
Query: 305 NYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
+Y+ GKIVYVEDM+ GLE+ PA+FVGLFSGKNVGKQVV V+
Sbjct: 580 HYRDGKIVYVEDMSVGLESGPASFVGLFSGKNVGKQVVCVS 620
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223948709|gb|ACN28438.1| unknown [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/341 (70%), Positives = 284/341 (83%), Gaps = 3/341 (0%)
Query: 6 ENKQVIFRGYIEGAPKETDMEIKISG-IQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
N++V+ RGYI+ AP+E DME+ G ++L+ P+G A LVKNLYLSCDPYMRGRMR
Sbjct: 166 RNRKVVLRGYIDRAPREEDMELVDGGAVELRVPEGGGGPAVLVKNLYLSCDPYMRGRMRD 225
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
F +SYIPPF PG P+EGFGV +VVDS +P F GD+V+G+TGWE+YSLI K EQLRKIQ
Sbjct: 226 -FRNSYIPPFKPGSPIEGFGVGRVVDSTHPGFSAGDVVSGMTGWEDYSLITKPEQLRKIQ 284
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
IPLSYH+GLLGMPGFTAY GF+E+CSPK GE+VFVSAASGAVGQ+VGQLAKLHGCY
Sbjct: 285 -QSDIPLSYHLGLLGMPGFTAYVGFYEICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCY 343
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVGSAG+ QKV+LLK K GFD AFNY +E DL AALKR FP+GIDIYF+NVGG MLDA L
Sbjct: 344 VVGSAGTDQKVELLKEKFGFDAAFNYKEEPDLTAALKRHFPEGIDIYFENVGGPMLDAVL 403
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
LNMR HGRIAVCGMVS H P GIHNLF+L++KRI MKGF+QSDY+HL+P+F+D +
Sbjct: 404 LNMRVHGRIAVCGMVSQHGVTAPAGIHNLFSLISKRIEMKGFIQSDYVHLFPQFVDDITR 463
Query: 305 NYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
+Y+ GKIVYVEDM+ GLE+ PA+FVGLFSGKNVGKQVV V+
Sbjct: 464 HYRDGKIVYVEDMSVGLESGPASFVGLFSGKNVGKQVVCVS 504
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|194702138|gb|ACF85153.1| unknown [Zea mays] gi|414879282|tpg|DAA56413.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/341 (70%), Positives = 284/341 (83%), Gaps = 3/341 (0%)
Query: 6 ENKQVIFRGYIEGAPKETDMEIKISG-IQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
N++V+ RGYI+ AP+E DME+ G ++L+ P+G A LVKNLYLSCDPYMRGRMR
Sbjct: 10 RNRKVVLRGYIDRAPREEDMELVDGGAVELRVPEGGGGPAVLVKNLYLSCDPYMRGRMRD 69
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
F +SYIPPF PG P+EGFGV +VVDS +P F GD+V+G+TGWE+YSLI K EQLRKIQ
Sbjct: 70 -FRNSYIPPFKPGSPIEGFGVGRVVDSTHPGFSAGDVVSGMTGWEDYSLITKPEQLRKIQ 128
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
IPLSYH+GLLGMPGFTAY GF+E+CSPK GE+VFVSAASGAVGQ+VGQLAKLHGCY
Sbjct: 129 -QSDIPLSYHLGLLGMPGFTAYVGFYEICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCY 187
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVGSAG+ QKV+LLK K GFD AFNY +E DL AALKR FP+GIDIYF+NVGG MLDA L
Sbjct: 188 VVGSAGTDQKVELLKEKFGFDAAFNYKEEPDLTAALKRHFPEGIDIYFENVGGPMLDAVL 247
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
LNMR HGRIAVCGMVS H P GIHNLF+L++KRI MKGF+QSDY+HL+P+F+D +
Sbjct: 248 LNMRVHGRIAVCGMVSQHGVTAPAGIHNLFSLISKRIEMKGFIQSDYVHLFPQFVDDITR 307
Query: 305 NYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
+Y+ GKIVYVEDM+ GLE+ PA+FVGLFSGKNVGKQVV V+
Sbjct: 308 HYRDGKIVYVEDMSVGLESGPASFVGLFSGKNVGKQVVCVS 348
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 347 | ||||||
| TAIR|locus:2034109 | 350 | AT1G65560 [Arabidopsis thalian | 0.979 | 0.971 | 0.700 | 1.5e-129 | |
| TAIR|locus:2097795 | 350 | AT3G03080 [Arabidopsis thalian | 0.979 | 0.971 | 0.628 | 1.8e-112 | |
| TAIR|locus:2148166 | 343 | AT5G16990 [Arabidopsis thalian | 0.974 | 0.985 | 0.603 | 1.4e-110 | |
| TAIR|locus:2148186 | 345 | AT5G17000 [Arabidopsis thalian | 0.974 | 0.979 | 0.601 | 1.6e-109 | |
| TAIR|locus:2148131 | 345 | AER "alkenal reductase" [Arabi | 0.974 | 0.979 | 0.595 | 3.4e-109 | |
| TAIR|locus:2028736 | 351 | AT1G26320 [Arabidopsis thalian | 0.979 | 0.968 | 0.606 | 1.5e-108 | |
| TAIR|locus:2148116 | 346 | AT5G16960 [Arabidopsis thalian | 0.962 | 0.965 | 0.598 | 1.9e-106 | |
| TAIR|locus:2153759 | 353 | AT5G37980 [Arabidopsis thalian | 0.968 | 0.951 | 0.585 | 1.4e-105 | |
| TAIR|locus:2153799 | 353 | AT5G37940 [Arabidopsis thalian | 0.968 | 0.951 | 0.582 | 2.8e-105 | |
| TAIR|locus:2154041 | 353 | AT5G38000 [Arabidopsis thalian | 0.962 | 0.946 | 0.582 | 2.8e-105 |
| TAIR|locus:2034109 AT1G65560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
Identities = 243/347 (70%), Positives = 291/347 (83%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISG-IQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMR 63
VENK+VI + Y++G P ETDME+K+ I+LKAPKGS FLVKNLYLSCDPYMRGRMR
Sbjct: 7 VENKKVILKNYVDGIPTETDMEVKLGETIELKAPKGSS--CFLVKNLYLSCDPYMRGRMR 64
Query: 64 SSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTE--QLR 121
F SY+PPFVPGQ +EGFG+++V+DSD+ N+KPGD+V+G+ GWEEYSL+R ++ QLR
Sbjct: 65 D-FHGSYLPPFVPGQRIEGFGLARVIDSDDTNYKPGDIVSGIIGWEEYSLLRSSDNLQLR 123
Query: 122 KIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
IQ D IPLSYH+GLLGM GFTAYAGF+E+C PK G+ VFVSAA GAVGQLVGQLAKLH
Sbjct: 124 NIQLDDDIPLSYHLGLLGMAGFTAYAGFNEICCPKKGDSVFVSAACGAVGQLVGQLAKLH 183
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GCYVVGSAGS QKV++LKN+LG+DEAFNY +E DL ALKR FP+GIDIYFDNVGG MLD
Sbjct: 184 GCYVVGSAGSKQKVEILKNELGYDEAFNYKEEADLDTALKRYFPEGIDIYFDNVGGSMLD 243
Query: 242 AALLNMRDHGRIAVCGMVSLHSYH-DPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
AALLNM+ GRIA+CGMVSL S QGI NL++ + KR+ ++GFLQSDYLH++P+FL+
Sbjct: 244 AALLNMKVRGRIALCGMVSLQSLSTSSQGIKNLYSAIYKRLRLEGFLQSDYLHIFPQFLE 303
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
V YK+GKIVYVED++EGL+ APAA VGLFSGKN+GKQVVRVA E
Sbjct: 304 NVKRYYKEGKIVYVEDISEGLDLAPAALVGLFSGKNIGKQVVRVAKE 350
|
|
| TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 217/345 (62%), Positives = 265/345 (76%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V NKQVI R Y+ G PKE+D+ S I LK P+GS + LVKNLYLSCDPYMR RM
Sbjct: 9 VANKQVILRDYVTGFPKESDLIFTDSTIDLKIPEGSKT--VLVKNLYLSCDPYMRIRMGK 66
Query: 65 SF--TSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRK 122
T++ P ++PG+P+ GF VSKV+DS +P++K GDL+ GL GW EYSLI K
Sbjct: 67 PDPGTAALAPHYIPGEPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLITPDFSHYK 126
Query: 123 IQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
IQ +PLSY+ GLLGMPG TAYAGF+E+CSPK GE VFVSAASGAVGQLVGQ AK+ G
Sbjct: 127 IQHTD-VPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMG 185
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
CYVVGSAGS++KVDLLKNK GFD+AFNY E DL AALKRCFP+GIDIYF+NVGG+MLDA
Sbjct: 186 CYVVGSAGSNEKVDLLKNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKMLDA 245
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYV 302
LLNM+ HGRIAVCGM+S ++ D +G+HNL ++ KRI +KGF+ SDY + +FLD+V
Sbjct: 246 VLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFV 305
Query: 303 ISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ ++GKI YVED+ EGLEN P+A +GLF GKNVGKQ++ VA E
Sbjct: 306 LPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350
|
|
| TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 207/343 (60%), Positives = 264/343 (76%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF 66
NKQVIF+ ++ G PKE+D + ++L+ P+GS S LVKNLYLSCDPYMR RM
Sbjct: 4 NKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKS--VLVKNLYLSCDPYMRSRMGKPD 61
Query: 67 TSSYIPP-FVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-KIQ 124
SS + + PG+P+ G+GVS+V++S +P++K GDL+ G+ GWEEYS+I + KIQ
Sbjct: 62 PSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQ 121
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
+PLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQ AK+ GCY
Sbjct: 122 HTD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCY 180
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVGSAGS +KVDLLK K GFD+AFNY +E+DL AALKRCFP+GID+YF+NVGG+MLDA L
Sbjct: 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVL 240
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
LNM HGRIAVCGM+S ++ + +G+HNL ++ KRI ++GF+ +D+ YP+FL+ V+
Sbjct: 241 LNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300
Query: 305 NYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
K+GKI YVED+ +GLE AP A VGLF GKNVGKQVV +A E
Sbjct: 301 RIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343
|
|
| TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 207/344 (60%), Positives = 261/344 (75%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSS- 65
NKQV+ + Y+ G PKE+D + K + ++ K P GS+S LVKNLYLSCDPYMR RM
Sbjct: 5 NKQVVLKNYVSGFPKESDFDFKTTTVEFKLPGGSNS--VLVKNLYLSCDPYMRIRMGKPD 62
Query: 66 -FTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-KI 123
T++ + PG+P+ G+GVS+V++S +P++K GDL+ G+ GWEEYS+I + KI
Sbjct: 63 PSTAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFKI 122
Query: 124 QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
Q IPLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQ AK+ GC
Sbjct: 123 QHTD-IPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGC 181
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243
YVVGSAGS++KVDLLK K GFD+AFNY +E DL AALKRCFP GIDIYF+NVGG+MLDA
Sbjct: 182 YVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAV 241
Query: 244 LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVI 303
LLNM HGRIAVCGM+S ++ + +G+HNL ++ KRI ++GF D+ Y +FLD+V+
Sbjct: 242 LLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVL 301
Query: 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ K+GKI YVED+ +GLE P A VGLF GKNVGKQVV +A E
Sbjct: 302 PHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345
|
|
| TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 205/344 (59%), Positives = 265/344 (77%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSS- 65
NKQVI + Y+ G P E+D + + ++L+ P+G++S LVKNLYLSCDPYMR RM
Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNS--VLVKNLYLSCDPYMRIRMGKPD 62
Query: 66 -FTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRK-TEQLRKI 123
T++ + PGQP++G+GVS++++S +P++K GDL+ G+ WEEYS+I T KI
Sbjct: 63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 124 QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
Q +PLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQLAK+ GC
Sbjct: 123 QHTD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC 181
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243
YVVGSAGS +KVDLLK K GFD+AFNY +E+DL AALKRCFP GIDIYF+NVGG+MLDA
Sbjct: 182 YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAV 241
Query: 244 LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVI 303
L+NM HGRIAVCGM+S ++ + +G+HNL ++ KRI ++GF+ SD+ Y +FL++V+
Sbjct: 242 LVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVL 301
Query: 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+ ++GKI YVED+ +GLE AP A VGLF GKNVGKQVV VA E
Sbjct: 302 PHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
|
|
| TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 210/346 (60%), Positives = 262/346 (75%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V NKQ+IF Y+ G PKE+D++I + I L+ P+GS S LVKNLYLSCDPYMR M
Sbjct: 9 VTNKQIIFPDYVTGFPKESDLKITTTTIDLRLPEGSTS--VLVKNLYLSCDPYMRICMGK 66
Query: 65 S--FTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRK 122
+SS +PP+ G P+ G GVSKV+DS +P++K GDL+ GL GWEEYS+I T
Sbjct: 67 PDPLSSSLVPPYKTGVPIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVITLTTYSH- 125
Query: 123 IQPDH-HIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
+ +H +PLSY+ GLLGMPG TAYAGF+EVCSPK GE VFVSAASGAVGQLVGQ AKL
Sbjct: 126 FKIEHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFAKLM 185
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GCYVVGSAGS +KV LLK K GFD+AFNY +E D AALKR FP+GIDIYF+NVGG+MLD
Sbjct: 186 GCYVVGSAGSKEKVYLLKTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGKMLD 245
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDY 301
A L+NM+ HGR+AVCGM+S ++ DP+G+HNL T++ KRI ++GF D+ YP+FLD+
Sbjct: 246 AVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKFLDF 305
Query: 302 VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
V+ ++GKI YVED+ EG E+ P+A +GLF GKNVGKQ+ VA E
Sbjct: 306 VLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351
|
|
| TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 206/344 (59%), Positives = 256/344 (74%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSS- 65
NKQV+ Y+ G KE+D+ I + I L+ KGS + LVKNLYLSCDPYMR RMR
Sbjct: 6 NKQVVLLDYVTGFAKESDLVITSTTIDLRVLKGSMTA--LVKNLYLSCDPYMRNRMRKPD 63
Query: 66 -FTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-KI 123
+ + F PG+P+ GFGVSKV+DS + +++ GDL+ G GWEEYS+I L KI
Sbjct: 64 PLSPATAQSFTPGKPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKI 123
Query: 124 QPDHH--IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
HH PLSY+ GLLGMPG TAY GF+E+C+PK G+ VFVSAASGAVGQLVGQ AKL
Sbjct: 124 ---HHTNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLM 180
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GCYVVGSAGS +KVDLLKNK GFD+AFNY +E +L+ ALKRCFP+GIDIYF+NVGG+MLD
Sbjct: 181 GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLD 240
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDY 301
A +LNMR HGRIA CGM+S ++ +P+GI+ L + KRI ++GF DY H Y FL++
Sbjct: 241 AVILNMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEF 300
Query: 302 VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
V+ K+GKI YVED+ +GLE+APAA VGLF GKNVGKQ+V V+
Sbjct: 301 VVPYIKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVS 344
|
|
| TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 203/347 (58%), Positives = 256/347 (73%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS-- 64
N QVI R Y+ G PKE+D+ I + + L+ P GS A LVKNLYLSCDP+ R RM
Sbjct: 12 NNQVILRNYVSGFPKESDLYIAATTVDLRVPPGSM--AVLVKNLYLSCDPFSRIRMEKPD 69
Query: 65 -SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-K 122
S +S + G+P+ GFGV+K +DS +PN+K GDL+ G GWEEYS+I T K
Sbjct: 70 PSSPASVARAYSIGKPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129
Query: 123 IQPDHH--IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
I HH +PLS++ GLLG+PG TAY GF+E+CSPK GE VFVSAASGAVGQLVGQ AK+
Sbjct: 130 I---HHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKM 186
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GCYVVGSA S +KVDLLK K G+DEAFNY +E DL AALKRCFP+GIDIYF+NVGG+ML
Sbjct: 187 AGCYVVGSASSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKML 246
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
DA L NMR HGRIA CGM+S ++ +P+G+HNL ++V KRI ++GF ++ Y +FLD
Sbjct: 247 DAVLENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLD 306
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+++ ++GKI YVED+ +GLEN P+A +GLF GKNVGKQ+V VA E
Sbjct: 307 FILPYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE 353
|
|
| TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 202/347 (58%), Positives = 255/347 (73%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS-- 64
N QVI R Y+ G PK++D+ I + I L+ P GS A LVKNLYLSCDP+ R RM
Sbjct: 12 NNQVILRDYVSGFPKQSDLYIATTTIDLRVPPGSM--AVLVKNLYLSCDPHSRTRMGKPD 69
Query: 65 -SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-K 122
S +S F G+P+ GFGV+K +DS +PN+K GDL+ G GWEEYS+I T K
Sbjct: 70 PSSQASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129
Query: 123 IQPDHH--IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
I HH +PLS++ GLLG+PG TAY GF+E+CSPK GE VFVSAASGAVGQLVGQ AK+
Sbjct: 130 I---HHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKM 186
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GCYVVGSA S +KVDLLK K G+D+AFNY +E DL AALKRCFP+GIDIYF+NVGG+ML
Sbjct: 187 AGCYVVGSASSKEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKML 246
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
DA L NMR HGRIA CGM+S ++ +P+G+HN T+V KRI ++ F ++ Y +FLD
Sbjct: 247 DAVLQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLD 306
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+++ + ++GKI YVED+ +GLEN P+A +GLF GKNVGKQ+V VA E
Sbjct: 307 FILPHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVARE 353
|
|
| TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
Identities = 201/345 (58%), Positives = 255/345 (73%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS-- 64
N QVIFR Y+ G PKE+D+ I S + L+ P GS A LVKNLYLSCDP+ R RM
Sbjct: 12 NNQVIFRNYVNGFPKESDLYIAASTVDLRVPPGSM--AVLVKNLYLSCDPHSRTRMGKPD 69
Query: 65 -SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-K 122
S +S F G+P+ GFGV+K +DS +PN+K GDL+ G GWEEYS+I T K
Sbjct: 70 PSSPASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129
Query: 123 IQPDHH--IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
I HH +PLS++ GLLG+PG TAY GF+E+CSPK GE VFVSAASGAVGQLVGQ AK+
Sbjct: 130 I---HHTDVPLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKM 186
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GCYVVGSA S +KVDLLK K G+D+AFNY +E DL AALKRCFP+GIDIYF+NVGG+ML
Sbjct: 187 AGCYVVGSASSEEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKML 246
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300
+A L NMR HGRIA CGM+S ++ P+ +HN T+V KRI ++GF ++ Y +FLD
Sbjct: 247 EAVLENMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLD 306
Query: 301 YVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
+++ + ++GK+ YVED+++GLEN P+A +GLF GKNVGKQ+V VA
Sbjct: 307 FILPHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVA 351
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q28719 | PTGR1_RABIT | 1, ., 3, ., 1, ., 7, 4 | 0.4005 | 0.9106 | 0.9054 | yes | no |
| Q3SZJ4 | PTGR1_BOVIN | 1, ., 3, ., 1, ., 7, 4 | 0.4011 | 0.9279 | 0.9787 | yes | no |
| Q6WAU0 | PULR_MENPI | 1, ., 3, ., 1, ., 8, 1 | 0.5734 | 0.9711 | 0.9853 | N/A | no |
| Q03102 | YMN1_YEAST | No assigned EC number | 0.3054 | 0.8876 | 0.8438 | yes | no |
| Q9C0Y6 | YKM8_SCHPO | 1, ., -, ., -, ., - | 0.4085 | 0.9827 | 0.9770 | yes | no |
| Q9EQZ5 | PTGR1_CAVPO | 1, ., 3, ., 1, ., 7, 4 | 0.4005 | 0.9135 | 0.9635 | yes | no |
| O34812 | YFMJ_BACSU | 1, ., -, ., -, ., - | 0.4246 | 0.9193 | 0.9410 | yes | no |
| P97584 | PTGR1_RAT | 1, ., 3, ., 1, ., 7, 4 | 0.3866 | 0.9279 | 0.9787 | yes | no |
| Q14914 | PTGR1_HUMAN | 1, ., 3, ., 1, ., 7, 4 | 0.3843 | 0.9221 | 0.9726 | yes | no |
| Q29073 | PTGR1_PIG | 1, ., 3, ., 1, ., 7, 4 | 0.3848 | 0.9308 | 0.9817 | yes | no |
| Q91YR9 | PTGR1_MOUSE | 1, ., 3, ., 1, ., 7, 4 | 0.3942 | 0.9250 | 0.9756 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.3.1 | 0.963 |
| 3rd Layer | 1.3.1.81 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.3.1.74 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 347 | |||
| PLN03154 | 348 | PLN03154, PLN03154, putative allyl alcohol dehydro | 0.0 | |
| cd08295 | 338 | cd08295, double_bond_reductase_like, Arabidopsis a | 0.0 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 1e-163 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 1e-130 | |
| cd08294 | 329 | cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun | 1e-110 | |
| cd08293 | 345 | cd08293, PTGR2, Prostaglandin reductase | 5e-77 | |
| TIGR02825 | 325 | TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy | 1e-73 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 1e-48 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 1e-33 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 1e-31 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 3e-28 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 7e-27 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 1e-25 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 2e-25 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 2e-25 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 5e-23 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 2e-22 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 5e-20 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 8e-20 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 9e-19 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 1e-18 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 3e-18 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 3e-18 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 3e-18 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 3e-18 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 3e-18 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 9e-17 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 1e-16 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 7e-16 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 1e-15 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 1e-14 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 7e-14 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 2e-13 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 3e-13 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 5e-13 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 1e-12 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 1e-12 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 4e-12 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 5e-12 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 1e-11 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 3e-11 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 4e-11 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 8e-11 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 1e-10 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 3e-09 | |
| cd08291 | 324 | cd08291, ETR_like_1, 2-enoyl thioester reductase ( | 8e-09 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 2e-07 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 5e-07 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 6e-07 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 6e-06 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 8e-06 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 9e-06 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 3e-05 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 6e-05 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 8e-05 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 8e-05 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 1e-04 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 1e-04 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 2e-04 | |
| pfam13602 | 129 | pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas | 0.002 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 0.002 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 0.003 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 0.004 |
| >gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 621 bits (1604), Expect = 0.0
Identities = 277/351 (78%), Positives = 309/351 (88%), Gaps = 7/351 (1%)
Query: 1 MMEQ--VENKQVIFRGYIEGAPKETDMEIKISG-IQLKAPKGSDSGAFLVKNLYLSCDPY 57
MME VENKQVI + YI+G PKETDME+K+ I+LKAPKGS GAFLVKNLYLSCDPY
Sbjct: 1 MMEGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGS--GAFLVKNLYLSCDPY 58
Query: 58 MRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKT 117
MRGRMR F SY+PPFVPGQ +EGFGVSKVVDSD+PNFKPGDL++G+TGWEEYSLIR +
Sbjct: 59 MRGRMRD-FHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSS 117
Query: 118 E-QLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQ 176
+ QLRKIQ IPLSYH+GLLGM GFTAYAGF+EVCSPK G+ VFVSAASGAVGQLVGQ
Sbjct: 118 DNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQ 177
Query: 177 LAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236
LAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY +E DL AALKR FP+GIDIYFDNVG
Sbjct: 178 LAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVG 237
Query: 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP 296
G+MLDAALLNM+ HGRIAVCGMVSL+S QGIHNL+ L++KRI M+GFLQSDYLHL+P
Sbjct: 238 GDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFP 297
Query: 297 RFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
+FL+ V YKQGKIVY+EDM+EGLE+APAA VGLFSGKNVGKQV+RVA E
Sbjct: 298 QFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348
|
Length = 348 |
| >gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Score = 577 bits (1489), Expect = 0.0
Identities = 223/340 (65%), Positives = 268/340 (78%), Gaps = 2/340 (0%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V NKQVI + Y+ G PKE+D+E++ + + LK P SG LVKNLYLSCDPYMRGRM+
Sbjct: 1 VRNKQVILKAYVTGFPKESDLELRTTKLTLKVP-PGGSGDVLVKNLYLSCDPYMRGRMKG 59
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
S Y+PPF PG+ + G+GV+KVVDS NP+FK GDLV G TGWEEYSLI + + LRKI
Sbjct: 60 HDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKID 119
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
+PLSY++GLLGMPG TAYAGF+EVC PK GE VFVSAASGAVGQLVGQLAKL GCY
Sbjct: 120 HTD-VPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCY 178
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVGSAGS +KVDLLKNKLGFD+AFNY +E DL AALKR FP GIDIYFDNVGG+MLDA L
Sbjct: 179 VVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVL 238
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
LNM HGRIA CGM+S ++ P+G+ NL ++ KR+ ++GFL DYLH YP FL+ +
Sbjct: 239 LNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSG 298
Query: 305 NYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
K+GK+ YVED+ +GLE+AP AFVGLF+G N+GKQVV+V
Sbjct: 299 YIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 458 bits (1180), Expect = e-163
Identities = 169/336 (50%), Positives = 215/336 (63%), Gaps = 8/336 (2%)
Query: 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF 66
N+QV+ EG P D E+ L K G LV+ LYLS DPYMRG M
Sbjct: 2 NRQVVLAKRPEGPPPPDDFELVEV--PLPELK---DGEVLVRTLYLSVDPYMRGWMSD-- 54
Query: 67 TSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPD 126
SY PP G+P+ G GV +VV+S +P+FK GDLV+G GW+EY+++ LRK+ P
Sbjct: 55 AKSYSPPVQLGEPMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRKLDPS 114
Query: 127 HHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVV 186
+PLS ++G+LGM G TAY G E+ PK GE V VSAA+GAVG +VGQ+AKL G VV
Sbjct: 115 LGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVV 174
Query: 187 GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLN 246
G AGS +K L +LGFD A NY DL ALK P GID+YFDNVGGE+LDAAL
Sbjct: 175 GIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAALTL 233
Query: 247 MRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNY 306
+ GRIA+CG +S ++ +P G NL ++TKR+TM+GF+ SDY +P L +
Sbjct: 234 LNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWL 293
Query: 307 KQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
+GK+ Y ED+ EGLENAP AF+GLF+GKN GK VV
Sbjct: 294 AEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 374 bits (962), Expect = e-130
Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 16/349 (4%)
Query: 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRG 60
M+ N++++ EGAP D ++ + + P G L++ LYLS DPYMRG
Sbjct: 3 CMQTQVNRRIVLASRPEGAPVPDDFRLEE--VDVPEPG---EGQVLLRTLYLSLDPYMRG 57
Query: 61 RMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQL 120
RM SY PP G+ + G V+KVV S++P F+PGD+V G++GW+EY++ E L
Sbjct: 58 RMSD--APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDG-EGL 114
Query: 121 RKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
RK+ P PLS ++G+LGMPG TAY G ++ PK+GE V VSAA+GAVG +VGQ+AKL
Sbjct: 115 RKLDP-SPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKL 173
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GC VVG AG ++K D L +LGFD +Y E D ALK P+GID+YF+NVGGE+L
Sbjct: 174 KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVL 232
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHD---PQGIHNLFTLVTKRITMKGFLQ-SDYLHLYP 296
DA L + RI VCG +S Y+ P G L L+ KR+ ++GF+ SDY +P
Sbjct: 233 DAVLPLLNLFARIPVCGAIS--QYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFP 290
Query: 297 RFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
L + K+GKI Y E + +GLENAP AF+GL SGKN GK VV+VA
Sbjct: 291 EALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA 339
|
Length = 340 |
| >gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Score = 324 bits (833), Expect = e-110
Identities = 138/345 (40%), Positives = 197/345 (57%), Gaps = 21/345 (6%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + + +G PKE+D E+ +L K G L + L+LS DPYMR
Sbjct: 1 VKAKTWVLKKHFDGKPKESDFELVEE--ELPPLK---DGEVLCEALFLSVDPYMR----- 50
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQ--LRK 122
++ G + G V+KV++S N F G +V GW +++ +Q L K
Sbjct: 51 PYSKRL----NEGDTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYK 106
Query: 123 IQPD--HHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
+ D +P S +G+LGMPG TAY G E+C PK+GE V V+ A+GAVG LVGQ+AK+
Sbjct: 107 LPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKI 166
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
GC V+G AGS KV LK +LGFD FNY L ALK P GID YFDNVGGE
Sbjct: 167 KGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFS 224
Query: 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF-TLVTKRITMKGFLQSDYLHLYPRFL 299
L +M D GR+AVCG +S ++ +P+ + T++ K++ M+GF+ + +P L
Sbjct: 225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL 284
Query: 300 DYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
++ K+GK+ Y E + EG EN P AF+G+ G+N GK +V+V
Sbjct: 285 KQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase | Back alignment and domain information |
|---|
Score = 239 bits (613), Expect = 5e-77
Identities = 125/351 (35%), Positives = 189/351 (53%), Gaps = 21/351 (5%)
Query: 7 NKQVIF--RGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
NK+V+ R G P + ++ + P + G LV+ LYLS DPYMR RM
Sbjct: 3 NKRVVLNSRPGKNGNPVAENFRVE----ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNE 58
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT-GWEEYSLIRKTEQLRKI 123
+ Y+ P+ Q ++G GV V +S + F GD+V W+ Y+++ + L K+
Sbjct: 59 DTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV 117
Query: 124 QP---DHHIPLSYHIGLLGMPGFTAYAGFHE--VCSPKSGEYVFVSAASGAVGQLVGQLA 178
P D H LSY +G +G+PG TA G E +P + + + VS A+GA G L GQ+
Sbjct: 118 DPQLVDGH--LSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIG 175
Query: 179 KLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237
+L GC VVG GS +K LLK++LGFD A NY + ++ L+ P+G+D+YFDNVGG
Sbjct: 176 RLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGG 234
Query: 238 EMLDAALLNMRDHGRIAVCGMVSLHS----YHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293
E+ D + M ++ I +CG +S ++ Y P L + IT + FL +Y
Sbjct: 235 EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKD 294
Query: 294 LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
+ + + K+GK+ E + EGLENA AF + +G N+GKQ+V+V
Sbjct: 295 KFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345 |
| >gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Score = 230 bits (588), Expect = 1e-73
Identities = 132/342 (38%), Positives = 190/342 (55%), Gaps = 24/342 (7%)
Query: 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT 67
K + + G P ++D E+K + ++G L++ L+LS DPYMR +
Sbjct: 2 KTWTLKKHFVGYPTDSDFELKTVEL-----PPLNNGEVLLEALFLSVDPYMRVAAKR--- 53
Query: 68 SSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ--- 124
G + G V++VV+S N G +V GW +S I + L K+
Sbjct: 54 ------LKEGDTMMGQQVARVVESKNVALPKGTIVLASPGWTSHS-ISDGKDLEKLLTEW 106
Query: 125 PDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
PD +PLS +G +GMPG TAY G E+C K GE V V+AA+GAVG +VGQ+AKL GC
Sbjct: 107 PDT-LPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK 165
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL 244
VVG+AGS +KV LK KLGFD AFNY L LK+ P G D YFDNVGGE + +
Sbjct: 166 VVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVI 224
Query: 245 LNMRDHGRIAVCGMVSLHSYHD--PQGIHNLFTLVTKRITMKGFLQSDYL-HLYPRFLDY 301
M+ GRIA+CG +S ++ P G ++ + + M+GF+ + + + + L
Sbjct: 225 GQMKKFGRIAICGAISTYNRTGPLPPG-PPPEIVIYQELRMEGFIVNRWQGEVRQKALKE 283
Query: 302 VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
++ +GKI Y E + EG EN PAAF+G+ G+N+GK +V+
Sbjct: 284 LLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 1e-48
Identities = 110/317 (34%), Positives = 156/317 (49%), Gaps = 32/317 (10%)
Query: 42 SGAFLVKNLYLSCDP----YMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFK 97
G LVKN ++ + + GR + PPF G EG G V +FK
Sbjct: 30 PGEVLVKNRFVGINASDINFTAGR----YDPGVKPPFDCG--FEGVGEVVAVGEGVTDFK 83
Query: 98 PGDLVAGLT--GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMP-GFTAYAGFHEVCS 154
GD VA ++ + EY ++ R P +P L + G TA EV
Sbjct: 84 VGDAVATMSFGAFAEYQVVPA----RHAVP---VPELKPEVLPLLVSGLTASIALEEVGE 136
Query: 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214
KSGE V V+AA+G GQ QLAKL GC+V+G+ S +K + LK+ LG D NY E
Sbjct: 137 MKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRPINYKTE- 194
Query: 215 DLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGI---- 270
DL LK+ +P+G+D+ +++VGGEM D + N+ GR+ V G +S Y G
Sbjct: 195 DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFIS--GYQSGTGPSPVK 252
Query: 271 HNLFT--LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE--GLENAPA 326
L+ K +++GF Y L P+ LD ++ Y++GK+V D GLE+
Sbjct: 253 GATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVAD 312
Query: 327 AFVGLFSGKNVGKQVVR 343
A L+SGKN+GK VV
Sbjct: 313 AVDYLYSGKNIGKVVVE 329
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 1e-33
Identities = 91/282 (32%), Positives = 126/282 (44%), Gaps = 21/282 (7%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT------GWEEYSLIRKTEQLRKIQP 125
PF+PG E GV V S FK GD VA L G+ EY ++ + L + P
Sbjct: 57 LPFIPG--SEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVV-PADWLVPL-P 112
Query: 126 DHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYV 185
D + L + G TA+ + K GE V V A+G VG QLAK G V
Sbjct: 113 DG-LSFEEAAAL-PLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATV 170
Query: 186 VGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAAL 244
V SS+K++LLK +LG D NY +E D V ++ +G+D+ D VGG+ A+L
Sbjct: 171 VAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAASL 228
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH-LYPRFLDYVI 303
+ GR+ G +S P NL L+ KR+T++G L +
Sbjct: 229 AALAPGGRLVSIGALSGG----PPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELF 284
Query: 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFS-GKNVGKQVVRV 344
GK+ V D L APAA L + GK V++V
Sbjct: 285 DLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326
|
Length = 326 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 1e-31
Identities = 87/286 (30%), Positives = 120/286 (41%), Gaps = 33/286 (11%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGW---EEYSLIRKTEQLRKIQPDHH 128
PFVPG E GV + V FK GD V LTG E ++ + + PD
Sbjct: 57 LPFVPG--SEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAA-AVFPL-PD-- 110
Query: 129 IPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
LS+ L + TAY + GE V V A+G VG QLAK G V+
Sbjct: 111 -GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIA 169
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALK-RCFPQGIDIYFDNVGGEMLDAALLN 246
+A S +K+ L + LG D +Y D DL +K +G+D+ +D VGG++ +A+L +
Sbjct: 170 AASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRS 227
Query: 247 MRDHGRIAVCGMVSLHSYHDPQGI-----HNLFTLVTKRITMKGFLQSDYLHLYP----R 297
+ GR+ V G S G NL L+ K I++ G Y P
Sbjct: 228 LAWGGRLLVIGFAS--------GEIPQIPANL--LLLKNISVVGVYWGAYARREPELLRA 277
Query: 298 FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
L + +GKI LE A A L K GK V+
Sbjct: 278 NLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 3e-28
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 58 MRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE------EY 111
G ++++F + P +PG + GV V FK GD V G+T + EY
Sbjct: 47 REGLLKAAFPLT--LPLIPG--HDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEY 102
Query: 112 SLIRKTEQLRKIQPDHHIPLSY-HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAV 170
++ E K P + LS+ L + G TA+ E+ K+G+ V + A+G V
Sbjct: 103 VVVPADELALK--PAN---LSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGV 157
Query: 171 GQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDI 230
G QLAK G V+ +A S+ D L+ LG DE +Y + D A P G+D
Sbjct: 158 GSFAVQLAKARGARVIATA-SAANADFLR-SLGADEVIDY-TKGDFERAAA---PGGVDA 211
Query: 231 YFDNVGGEMLDAALLNMRDHGRIA-VCGMVSLHSYHDPQGIHNLFTLV 277
D VGGE L +L ++ GR+ + G +G+ F V
Sbjct: 212 VLDTVGGETLARSLALVKPGGRLVSIAGPPPAEQAAKRRGVRAGFVFV 259
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 7e-27
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV-AGLTGWE-------EYSLIRKTEQLRKI 123
P+VPG +G GV + V K GD V GW EY ++ +QL +
Sbjct: 57 LPYVPGS--DGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVV-PADQLVPL 113
Query: 124 QPDHHIPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
PD +S+ G LG+P TAY K+GE V V SGAVG QLA+ G
Sbjct: 114 -PDG---VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAG 169
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLD 241
V+ +A S++ +L++ G D FNY E DL + QG+D+ + + L
Sbjct: 170 ARVIATASSAEGAELVRQ-AGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVNLA 227
Query: 242 AALLNMRDHGRIAVCG 257
L + GRI V G
Sbjct: 228 KDLDVLAPGGRIVVYG 243
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-25
Identities = 75/242 (30%), Positives = 96/242 (39%), Gaps = 43/242 (17%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT------------------------- 106
P + G EG GV V K GD V L
Sbjct: 29 LPLILGH--EGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLD 86
Query: 107 -GWEEYSLIRKTEQLRKIQPDHHIPLSYHIG-LLGMPGFTAYAGFHEVCSPKSGEYVFVS 164
G+ EY ++ + L + PD LS LL P TAY K G+ V V
Sbjct: 87 GGFAEYVVVP-ADNLVPL-PDG---LSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVL 141
Query: 165 AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224
A G VG L QLAK G V+ + S +K++L K +LG D +Y +E DL L+
Sbjct: 142 GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELRLTG 198
Query: 225 PQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283
G D+ D VGG L AL +R GRI V G S D L L+ K +T+
Sbjct: 199 GGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDD-----LRRLLFKELTI 253
Query: 284 KG 285
G
Sbjct: 254 IG 255
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 2e-25
Identities = 79/295 (26%), Positives = 123/295 (41%), Gaps = 31/295 (10%)
Query: 58 MRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE------EY 111
RG + P +PG G V+ V S FK GD V G + EY
Sbjct: 46 RRGPPKLLLGRP--FPPIPGMDFAGEVVA--VGSGVTRFKVGDEVFGRLPPKGGGALAEY 101
Query: 112 SLIRKTEQLRKIQPDHHIPLSYHIG-LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAV 170
+ ++ +K P+ +S+ L + G TA + K G+ V ++ ASG V
Sbjct: 102 VVAPESGLAKK--PEG---VSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGV 156
Query: 171 GQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDI 230
G Q+AK G +V G S++ +L+++ LG DE +Y E D VA + D+
Sbjct: 157 GTFAVQIAKALGAHVTGVC-STRNAELVRS-LGADEVIDYTTE-DFVALTAG--GEKYDV 211
Query: 231 YFDNVGGEMLDA--ALLNMRDHGR-IAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287
FD VG A L ++ GR ++V G S L +R+
Sbjct: 212 IFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLG-GGGRRLKF-FLA 269
Query: 288 QSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
+ + L+ + ++GK+ V D LE+AP A+ L SG+ GK V+
Sbjct: 270 KPN-----AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 2e-25
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPL 131
PFV G VEG GV + V FK GD VA Y+ + R + + L
Sbjct: 54 LPFVLG--VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYA------EYRVVPASRLVKL 105
Query: 132 SYHIGL-----LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVV 186
I L + G TA+ E K G+ V V AA+G VG L+ Q AK G V+
Sbjct: 106 PDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVI 165
Query: 187 GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAAL 244
G+ S +K +L + G D NY DE D V ++ +G+D+ +D VG + + +L
Sbjct: 166 GTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSL 222
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 5e-23
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 57/306 (18%)
Query: 72 PPFVPGQPVEGFGVSKVVDS---DNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQP 125
PPFVPG F + V++ +FK GD V GLT G+ E + +Q+ + P
Sbjct: 56 PPFVPG-----FECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEV-VNVPADQVFPL-P 108
Query: 126 DH-------HIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178
D P++Y TAY E+ + + G+ V V +A+G VG GQL
Sbjct: 109 DGMSFEEAAAFPVNY---------LTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLC 159
Query: 179 K-LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237
K + VVG+A S+ K + LK + G +Y + D V +K+ P+G+DI D +GG
Sbjct: 160 KTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGG 216
Query: 238 EMLDAALLNMRDHGRIAVCGMVSL-------------HSYHDPQGIHNLFTLVTKRITMK 284
E + ++ GR+ V G +L ++ P+ + L+++ ++
Sbjct: 217 EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKV--DPMKLISENKSVL 274
Query: 285 GFLQSDYLHLYPR------FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVG 338
GF + L+ +D ++ Y++GKI D E A L S KN+G
Sbjct: 275 GF---NLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIG 331
Query: 339 KQVVRV 344
K V+
Sbjct: 332 KVVLTP 337
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 95.6 bits (239), Expect = 2e-22
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 54/280 (19%)
Query: 89 VDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMP--GF 143
V +K GD V L G+ EY ++ + L P+ LS +P F
Sbjct: 72 VGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV--PEG---LSLVEAA-ALPEVFF 125
Query: 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 203
TA+ ++ K+GE V + + VG QLAK G V+ +AGS +K++ + LG
Sbjct: 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALG 184
Query: 204 FDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGGEML--DAALLNMRDHGRIAVCGM-- 258
D A NY E D +K +G+D+ D VGG+ L + L GR+ + G+
Sbjct: 185 ADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPD--GRLVLIGLLG 241
Query: 259 ---VSLHSYHDPQGIHNLFTLVTKRITMKGFL---QSD----------YLHLYPRFLDYV 302
L +L L+ KR+T+ G +S H++P F
Sbjct: 242 GAKAEL----------DLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFAS-- 289
Query: 303 ISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
G+I V D LE A A + S +++GK V+
Sbjct: 290 ------GRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 5e-20
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 169 AVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-Q 226
VG QLAK G V+ S +K++L K +LG D NY DE D V ++ +
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58
Query: 227 GIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285
G+D+ D VG L+ AL +R GR+ V G+ P L L+ K +T+ G
Sbjct: 59 GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTILG 113
Query: 286 FLQSDYLHLYPRFLDYVIS 304
L + L+ + S
Sbjct: 114 SLGGGREE-FEEALELLAS 131
|
Length = 131 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 8e-20
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 11/189 (5%)
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215
+ GE V V A VG Q+AKL G V+ +AGS K++ K LG D +Y E
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDF 223
Query: 216 LVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFT 275
+ + +G+D+ ++VG + +L ++ GR+ CG + + +L
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATT-----GYEAPIDLRH 278
Query: 276 LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGK 335
+ +++++ G LD + +GK+ V D LE A A L S +
Sbjct: 279 VFWRQLSILGSTMGT-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESRE 333
Query: 336 NVGKQVVRV 344
GK V+
Sbjct: 334 QFGKIVLTP 342
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 9e-19
Identities = 73/290 (25%), Positives = 107/290 (36%), Gaps = 33/290 (11%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQPDHH 128
PF PG + G + S F+ GD VA LT G EY + + L + P+
Sbjct: 57 LPFTPG--YDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLD-AKYLVPV-PEG- 111
Query: 129 IPLSYHIGLLGMP--GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVV 186
+ + TAY H +G+ V + ASG VGQ + +LA L G V
Sbjct: 112 ---VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVY 168
Query: 187 GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLN 246
G+A S + L+ +Y + D + A+ P G+D+ FD VGGE + +
Sbjct: 169 GTA-SERNHAALRELGA--TPIDYRTK-DWLPAMLT--PGGVDVVFDGVGGESYEESYAA 222
Query: 247 MRDHGRIAVCGMVSLHSYHDPQGIHNLFTLV----------TKRITMKGFLQSDYLHLYP 296
+ G + G S L +R T ++ D
Sbjct: 223 LAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATF-YYVWRDRAEDPK 281
Query: 297 RF---LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
F L ++ +GKI L A L SGK VGK V+
Sbjct: 282 LFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVLL 331
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 1e-18
Identities = 69/299 (23%), Positives = 103/299 (34%), Gaps = 55/299 (18%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE------EYSLIRKTEQLRKIQP 125
P VPG V+G GV V + +K GD VA EY+++
Sbjct: 56 YPHVPG--VDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVV----------- 102
Query: 126 DHHIPLSYHIGL-------LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178
D L L L G TAY + ++G + ++ +G VG QLA
Sbjct: 103 DARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLA 162
Query: 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGG 237
K G V+ + S + + +K LG D +YNDE D+ +K +G+D D VGG
Sbjct: 163 KRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGG 219
Query: 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDP----QGIHNLF--------TLVTKRITMKG 285
E A + +G + S P +H + +
Sbjct: 220 ETAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDL--R 277
Query: 286 FLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
+ + L L GK+ + E P A L GK VV +
Sbjct: 278 YAGEELLEL-----------LAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 3e-18
Identities = 82/300 (27%), Positives = 121/300 (40%), Gaps = 48/300 (16%)
Query: 69 SYIPPFVPG-QPVEGFGVSKVV---DSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLR 121
Y PP PG + G V+ V +K GD V L G+ EY + Q+
Sbjct: 50 KYPPP--PGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAV-PAGQVL 106
Query: 122 KIQPDHHIPLSYHIGLLGMPG--FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAK 179
+ P+ LS + +P FT ++ + K+GE V + + +G QLAK
Sbjct: 107 PV-PE---GLSL-VEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAK 161
Query: 180 LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGE 238
G V +AGS +K LG D A NY +E D V +K +G+D+ D VGG
Sbjct: 162 AFGARVFTTAGSDEKCA-ACEALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGS 219
Query: 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH---NLFTLVTKRITMKGFLQSDYLHLY 295
L+ + + GRI G G +L L+ KR+T+ G L
Sbjct: 220 YLNRNIKALALDGRIVQIGFQ--------GGRKAELDLGPLLAKRLTITGST------LR 265
Query: 296 PRFLDY-----------VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
R + V G++ V D LE+A A + SG ++GK V+ V
Sbjct: 266 ARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 84.1 bits (209), Expect = 3e-18
Identities = 64/216 (29%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE----------EYSLIRKTEQLRK 122
P PG ++ G VV SD+P F+ GD V +TG++ EY +R
Sbjct: 58 PHTPG--IDAAGT--VVSSDDPRFREGDEVL-VTGYDLGMNTDGGFAEY--VR------- 103
Query: 123 IQPDHHIPL-----SYHIGLLGMPGFTA----YAGFHEVCSPKSGEYVFVSAASGAVGQL 173
+ D +PL +LG GFTA + +P+ G V V+ A+G VG +
Sbjct: 104 VPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSI 162
Query: 174 -VGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND-ETDLVAAL-KRCFPQGIDI 230
V LAKL G VV G ++ D LK LG E + D + L K + ID
Sbjct: 163 AVAILAKL-GYTVVALTGKEEQADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAID- 219
Query: 231 YFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHD 266
VGG++L L + G +A CG +
Sbjct: 220 ---TVGGDVLANLLKQTKYGGVVASCGNAAGPELTT 252
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 82/295 (27%), Positives = 120/295 (40%), Gaps = 38/295 (12%)
Query: 70 YIPPFVPG-QPVEGFGVSKVV---DSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRK 122
Y PP PG + G V+ V SD FK GD V L G+ EY++ K
Sbjct: 52 YPPP--PGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHK------ 103
Query: 123 IQPDH--HIP--LSYHIGLLGMPGF-TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQL 177
H HIP ++ F TA+ + K G+ V + A + VG QL
Sbjct: 104 ---GHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQL 160
Query: 178 AKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVG 236
A+ +G + + S +KVD K L Y DE +K+ +G+++ D VG
Sbjct: 161 AEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVG 219
Query: 237 GEML--DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL---QSD- 290
G L A +L + G+ V G + NL L+ KR ++ +SD
Sbjct: 220 GSYLSETAEVLAV--DGKWIVYGFMGGAKVEKF----NLLPLLRKRASIIFSTLRSRSDE 273
Query: 291 Y-LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
Y L F V+ ++G+I + D LE A L KN+GK V+ V
Sbjct: 274 YKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV 328
|
Length = 334 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 3e-18
Identities = 63/277 (22%), Positives = 106/277 (38%), Gaps = 32/277 (11%)
Query: 81 EGFGVSKVVDSDNPNFKPGDLVAGLT--GWEEYSLIRKTEQLRKIQPDH-------HIPL 131
E G+ V S K GD V GL + + + + KI PD +P+
Sbjct: 34 ECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDAR-LVVKI-PDSLSFEEAATLPV 91
Query: 132 SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191
+Y TAY ++ + GE V + AA+G VGQ QLA+ G V + GS
Sbjct: 92 AY---------LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGS 142
Query: 192 SQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGGEMLDAALLNMRDH 250
+K + L+ G + + + + R +G+D+ +++ GE+L A+ +
Sbjct: 143 EEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPF 202
Query: 251 GRIAVCGMVSLHSYHDPQGIHNLFTLVTKR-ITMKGFLQSDYLHLYP----RFLDYVISN 305
GR V + D L R ++ P L V+
Sbjct: 203 GR-----FVEI-GKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLEL 256
Query: 306 YKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
+ G + + + AF + SGK++GK V+
Sbjct: 257 LEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 3e-18
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
L M TAY E+ + G+ V ++AAS +VG Q+A G V+ + +S+K D
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184
Query: 198 LKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVC 256
L LG DE DLVA + R +G+D+ FD VGG + G + V
Sbjct: 185 LL-ALGAAHVIVT-DEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVY 242
Query: 257 GMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH---LYPRFLDYVISNYKQGKIVY 313
G +S +P L + K +T +G+ + R + +++ G +
Sbjct: 243 GALS----GEPTPF-PLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP 297
Query: 314 VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
V D ++ A L SG+ +GK VV
Sbjct: 298 VVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 9e-17
Identities = 86/308 (27%), Positives = 126/308 (40%), Gaps = 77/308 (25%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE-------EYSLIRKTEQLRKIQP 125
P +PG G VV S++P F+ GD V +TG+ YS Q ++
Sbjct: 57 PMIPGIDAAG----TVVSSEDPRFREGDEVI-VTGYGLGVSHDGGYS------QYARVPA 105
Query: 126 DHHIPLSYHIGL-----LGMPGFTAYAGFHEV----CSPKSGEYVFVSAASGAVGQL-VG 175
D +PL + L LG GFTA + +P+ G V V+ A+G VG L V
Sbjct: 106 DWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVA 164
Query: 176 QLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL-KRCFPQGIDIYFDN 234
L+KL G VV S G +++ D LK +LG E + D + L K + +D
Sbjct: 165 ILSKL-GYEVVASTGKAEEEDYLK-ELGASEVIDREDLSPPGKPLEKERWAGAVD----T 218
Query: 235 VGGEMLDAALLNMRDHGRIAVCGM-----------------VSLHSYHDPQGIHNLFTLV 277
VGG L L ++ G +A CG+ VSL GI +++ +
Sbjct: 219 VGGHTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSL------LGIDSVYCPM 272
Query: 278 TKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE-GLENAPAAFVGLFSGKN 336
R L +D L PR L+ + E LE P A + +G++
Sbjct: 273 ALREAAWQRLATD---LKPRNLESIT--------------REITLEELPEALEQILAGQH 315
Query: 337 VGKQVVRV 344
G+ VV V
Sbjct: 316 RGRTVVDV 323
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 1e-16
Identities = 83/320 (25%), Positives = 125/320 (39%), Gaps = 45/320 (14%)
Query: 10 VIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDP----YMRGRMRSS 65
V++ + G P +E+ + L P G LV+ L +P + G S
Sbjct: 1 VVYTQF--GEPLPLVLEL----VSLPIPPPGP-GEVLVRMLAAPINPSDLITISGAYGSR 53
Query: 66 FTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTG---WEEYSLIRKTEQLRK 122
P VPG EG GV V S G V L G W+EY + + L
Sbjct: 54 PP----LPAVPG--NEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVA-PADDL-- 104
Query: 123 IQPDHHIPLSYHIGLLGM----PGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178
+P S M P TA+ E G++V +AA+ AVG+++ QLA
Sbjct: 105 ----IPVPDSISDEQAAMLYINP-LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLA 159
Query: 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALK-RCFPQGIDIYFDNVGG 237
KL G + ++V+ LK LG DE + + E DL +K G + D VGG
Sbjct: 160 KLLGFKTINVVRRDEQVEELKA-LGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGG 217
Query: 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH---- 293
E ++R G + G++S P+ + + K IT++GF +LH
Sbjct: 218 ESATRLARSLRPGGTLVNYGLLSGEPVPFPRSV-----FIFKDITVRGFWLRQWLHSATK 272
Query: 294 -LYPRFLDYVISNYKQGKIV 312
VI + G +
Sbjct: 273 EAKQETFAEVIKLVEAGVLT 292
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 7e-16
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 17/209 (8%)
Query: 142 GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK 201
G TA+ G + + ++G+ V + +G VG + QLAK G V +A S K +
Sbjct: 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASSE-KAAFAR-S 186
Query: 202 LGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS 260
LG D Y + + VA +G D+ FD VGGE LDA+ + +GR+ +
Sbjct: 187 LGADPIIYYRETVVEYVAEHTG--GRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGA 244
Query: 261 LHS----YHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKI-VYVE 315
H +FTL+ + L R ++ +G++ ++
Sbjct: 245 THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVE-------RGQLRPLLD 297
Query: 316 DMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
LE A AA L SG GK V+ V
Sbjct: 298 PRTFPLEEAAAAHARLESGSARGKIVIDV 326
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 73/293 (24%), Positives = 116/293 (39%), Gaps = 34/293 (11%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV----AGLTGWEEYSLIRKTEQLRKIQPDH 127
PP V G EG G V S + KPGD V GL W ++++ + L K+ D
Sbjct: 63 PPAVGG--NEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVV-PADDLIKVPND- 118
Query: 128 HIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
+ L + TAY + + G++V + A+ AVGQ V QLAKL G +
Sbjct: 119 -VDPEQ-AATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTIN 176
Query: 188 SAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAA--LKRCFPQGIDIYFDNVGGEMLDA 242
++ LK LG D + L+A LK + + VGG+
Sbjct: 177 VVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATE 236
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL-----HLYPR 297
+ G + G +S P + L+ K IT++GF + +L
Sbjct: 237 LARLLSPGGTMVTYGGMSGQPVTVPTSL-----LIFKDITLRGFWLTRWLKRANPEEKED 291
Query: 298 FLDYVISNYKQGKIVYV------EDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
L+ + ++GK+ +D E ++A A + G GKQV+ +
Sbjct: 292 MLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGG---GKQVLVM 341
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 1e-14
Identities = 62/200 (31%), Positives = 91/200 (45%), Gaps = 25/200 (12%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPG----DLVAGL----TGWEEYSLIRKTEQLRKI 123
P+VPG V+ VVD+ P P +VA G+ E ++ + L +
Sbjct: 59 LPYVPGG-----EVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAV-ADVDSLHPV 112
Query: 124 QPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
PD + L + ++ G TA ++ + G+ V V+AA+G +G L+ QLAK G
Sbjct: 113 -PDG-LDLEAAVAVV-HDGRTALGLL-DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA 168
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE--TDLV-AALKRCFPQGIDIYFDNVGGEML 240
VVG+AG K L++ LG D A +Y D V AL G+ + D VGG +
Sbjct: 169 TVVGAAGGPAKTALVR-ALGADVAVDYTRPDWPDQVREALG---GGGVTVVLDGVGGAIG 224
Query: 241 DAALLNMRDHGRIAVCGMVS 260
AAL + GR G S
Sbjct: 225 RAALALLAPGGRFLTYGWAS 244
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 7e-14
Identities = 65/273 (23%), Positives = 104/273 (38%), Gaps = 39/273 (14%)
Query: 96 FKPGDLVAGL--TGWEEYSLIRKTEQ----------LR--KIQPDH---HIP--LSY-HI 135
FK GD V W + + E L + P+ P LS+
Sbjct: 79 FKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEA 138
Query: 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV 195
L G TA+ + K G+ V V G V Q AK G V+ ++ S +K+
Sbjct: 139 ATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKL 197
Query: 196 DLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGEMLDAALLNMRDHGRIA 254
+ K LG D NY D + + +G+D + G L ++ + G I+
Sbjct: 198 ERAK-ALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVIS 256
Query: 255 VCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL---QSDYLHLYPRFLDYVISNYKQGKI 311
+ G +S + L L+TK T++G ++ + + R ++ +I
Sbjct: 257 LIGFLS-----GFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMN-RAIE-------AHRI 303
Query: 312 VYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
V D E A A+ L SG + GK V+RV
Sbjct: 304 RPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 69.7 bits (172), Expect = 2e-13
Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 28/194 (14%)
Query: 75 VPGQPV---EGFGVSKVVDSDNPNFKPGDLVAGLT--GWEEYSLIRKTEQLRKIQPDH-- 127
PG+ V E GV V GD V GL + + + I PD
Sbjct: 20 YPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGAFATRVVTDAR-LVVPI-PDGWS 77
Query: 128 -----HIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
+P+ + TAY ++ + GE V + AA+G VGQ QLA+ G
Sbjct: 78 FEEAATVPVVF---------LTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLG 128
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEA--FNYNDETDLVAALKRCFP-QGIDIYFDNVGGEM 239
V +AGS +K D L+ LG + F+ D + R +G+D+ +++ GE
Sbjct: 129 AEVFATAGSPEKRDFLRA-LGIPDDHIFSSRD-LSFADEILRATGGRGVDVVLNSLSGEF 186
Query: 240 LDAALLNMRDHGRI 253
LDA+L + GR
Sbjct: 187 LDASLRCLAPGGRF 200
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 69.5 bits (171), Expect = 3e-13
Identities = 75/329 (22%), Positives = 119/329 (36%), Gaps = 49/329 (14%)
Query: 46 LVKNLYLS---CDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV 102
LVK ++ D + + P + G G V +V S FK GD V
Sbjct: 30 LVKVKAVALNPVDWKHQ-----DYGFIPSYPAILGCDFAGT-VVEV-GSGVTRFKVGDRV 82
Query: 103 AGLT-----------GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGL-LGMPGFTAYAGFH 150
AG ++EY + + PD+ +S+ L + TA
Sbjct: 83 AGFVHGGNPNDPRNGAFQEYVVADADLTAKI--PDN---ISFEEAATLPVGLVTAALALF 137
Query: 151 ----------EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN 200
+ G+ V + S +VG L QLAKL G V+ +A S + DL+K
Sbjct: 138 QKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK- 195
Query: 201 KLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLN-MRDHGRIAVCGMV 259
LG D F+Y+D D+V ++ + D + + G + ++
Sbjct: 196 SLGADAVFDYHD-PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLL 254
Query: 260 SL-HSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VED 316
+ +G+ F L T+ G + D F Y+ ++GK+ V
Sbjct: 255 PVPEETEPRKGVKVKFVLGY---TVFGEIPEDREF-GEVFWKYLPELLEEGKLKPHPVRV 310
Query: 317 MNEGLENAPAAFVGLFSGKNVG-KQVVRV 344
+ GLE L GK G K VVR+
Sbjct: 311 VEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 5e-13
Identities = 71/300 (23%), Positives = 97/300 (32%), Gaps = 40/300 (13%)
Query: 55 DPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLI 114
D + G + P PG G V S FKPGD V E ++
Sbjct: 5 DTALEGLSTGTE--KLPLPLPPGY--SSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVV 60
Query: 115 RKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLV 174
L + PD L L TA G + P+ GE V V G VG L
Sbjct: 61 PA-NLLVPL-PDG---LPPERAALTALAATALNGVRD-AEPRLGERVAVVGL-GLVGLLA 113
Query: 175 GQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233
QLAK G VVG VD + EA D +G D+ +
Sbjct: 114 AQLAKAAGAREVVG-------VDPDAARRELAEALGPADPV-AADTADEIGGRGADVVIE 165
Query: 234 NVG-GEMLDAALLNMRDHGRIAVCGMVSLHS------YHDPQGIHNLFTLVTKRITMKGF 286
G L+ AL +RD GR+ + G L +H + + ++ G
Sbjct: 166 ASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFH-----FKRLPIRSSQVYGIGR 220
Query: 287 LQSDYLHLYPR----FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
R LD + + I + E+AP A+ LF +VV
Sbjct: 221 YDRPRRWTEARNLEEALDLLAEGRLEALITHRVP----FEDAPEAYRLLFEDPPECLKVV 276
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 1e-12
Identities = 72/319 (22%), Positives = 119/319 (37%), Gaps = 65/319 (20%)
Query: 47 VKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPN---FKPGDLVA 103
V+ LY + PY PF PG F S VV + P+ GD V
Sbjct: 27 VRGLYPTMPPY---------------PFTPG-----FEASGVVRAVGPHVTRLAVGDEVI 66
Query: 104 GLTGWE-----------EYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEV 152
TG E ++RK L + +P+ T F
Sbjct: 67 AGTGESMGGHATLVTVPEDQVVRKPASL-SFEEACALPVV---------FLTVIDAFARA 116
Query: 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND 212
GE++ + A+G G + QLA+L G + +A S K++ LK +LG NY
Sbjct: 117 -GLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYV- 173
Query: 213 ETDLVAALKRCFP-QGIDIYFDNVGGEMLDAALLNMRDHGR---IAVCGM-----VSLHS 263
E D + R +G+D+ + + GE + L + GR IA+ + V L
Sbjct: 174 EEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV 233
Query: 264 YHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLEN 323
+ Q H+ + ++ L D + ++S ++G++ ++
Sbjct: 234 LSNNQSFHS--------VDLRKLLLLDP-EFIADYQAEMVSLVEEGELRPTVSRIFPFDD 284
Query: 324 APAAFVGLFSGKNVGKQVV 342
A+ L +N+GK VV
Sbjct: 285 IGEAYRYLSDRENIGKVVV 303
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 1e-12
Identities = 74/306 (24%), Positives = 112/306 (36%), Gaps = 60/306 (19%)
Query: 71 IPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG-------------LTGWEEYSLIRKT 117
P +PG E G V K GD V +G E +K
Sbjct: 56 KLPLIPGH--EIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI 113
Query: 118 ----------EQLRKIQPDH---HIPLSY---HIGLLGMPGFTAYAGFHEVCSPKSGEYV 161
E + + P IP L G T Y + + K G++V
Sbjct: 114 TGYTTDGGYAEYV--VVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKA-NVKPGKWV 170
Query: 162 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALK 221
V A G +G + Q AK G V+ S +K++L K KLG D N +D D + A+K
Sbjct: 171 AVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-DALEAVK 227
Query: 222 RCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRI 281
D D VG L+ +L +R G + + G+ F L+ K I
Sbjct: 228 EIA----DAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLL----PAFLLILKEI 279
Query: 282 TMKGFL---QSDYLHLYPRFLDYVISNYKQGKI--VYVEDMNEGLENAPAAFVGLFSGKN 336
++ G L ++D LD+ +GKI +E + L+ A+ + GK
Sbjct: 280 SIVGSLVGTRAD----LEEALDFA----AEGKIKPEILETI--PLDEINEAYERMEKGKV 329
Query: 337 VGKQVV 342
G+ V+
Sbjct: 330 RGRAVI 335
|
Length = 339 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 65.6 bits (161), Expect = 4e-12
Identities = 66/204 (32%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE--E-----YSLIRKTEQLRKIQP 125
P VPG ++ G VV+S +P FKPGD V LTGW E Y+ Q +++
Sbjct: 58 PLVPG--IDLAGT--VVESSSPRFKPGDRVV-LTGWGVGERHWGGYA------QRARVKA 106
Query: 126 DHHIPLSYHIGL-----LGMPGFTA----YAGFHEVCSPKSGEYVFVSAASGAVGQL-VG 175
D +PL + +G GFTA A +P G V V+ A+G VG + V
Sbjct: 107 DWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGP-VLVTGAAGGVGSVAVA 165
Query: 176 QLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL-KRCFPQGIDIYFDN 234
LA+L G VV S G ++ D L++ LG E + + ++ L K + + D
Sbjct: 166 LLARL-GYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPGRPLQKERWAGAV----DT 219
Query: 235 VGGEMLDAALLNMRDHGRIAVCGM 258
VGG L L R G +A CG+
Sbjct: 220 VGGHTLANVLAQTRYGGAVAACGL 243
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 5e-12
Identities = 77/298 (25%), Positives = 117/298 (39%), Gaps = 50/298 (16%)
Query: 73 PFVPGQPVEGFGVSKVVD--SDNPNFKPGDLVAGLTGWE------EYSLIRKTEQLRKIQ 124
P G+ G VVD S +F+ GD V G EY ++ + E +K
Sbjct: 74 PLTLGRDCSG----VVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKK-- 127
Query: 125 PDHHIPLSYHIGLLGMP--GFTAYAGFHEVC----SPKSGEYVFVSAASGAVGQLVGQLA 178
P + LS H +P G TA++ V +G+ V + SG VG QL
Sbjct: 128 PKN---LS-HEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLL 183
Query: 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238
K G +V + S+ + L+K LG D+ +YN+E +R D+ D VGG+
Sbjct: 184 KAWGAHVTTTC-STDAIPLVK-SLGADDVIDYNNEDFEEELTERG---KFDVILDTVGGD 238
Query: 239 MLDAALLNMRDHGRIAVCGMVSLHSYH----DPQGI-----HNLFTLVTKRITMKGFLQS 289
AL ++ G V+L S D G+ + L+ + +K L+
Sbjct: 239 TEKWALKLLKKGGTY-----VTLVSPLLKNTDKLGLVGGMLKSAVDLL--KKNVKSLLKG 291
Query: 290 -----DYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
+ LD + + GKI V D E P A+ + SG GK V+
Sbjct: 292 SHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI 349
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 203
TA K G+ V V+ A G VG QLAK G V+ S +K+ +LK +LG
Sbjct: 150 TAVHALK-RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELG 207
Query: 204 FDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHS 263
D + + ++ V L G D+ + VG ++ +L ++ GR+ + G V
Sbjct: 208 ADYVIDGSKFSEDVKKL-----GGADVVIELVGSPTIEESLRSLNKGGRLVLIGNV---- 258
Query: 264 YHDPQGIH-NLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLE 322
P L+ K I + G + + + L V K+GKI V D LE
Sbjct: 259 --TPDPAPLRPGLLILKEIRIIGSISATKADVE-EALKLV----KEGKIKPVIDRVVSLE 311
Query: 323 NAPAAFVGLFSGKNVGKQVVR 343
+ A L SGK VG+ V++
Sbjct: 312 DINEALEDLKSGKVVGRIVLK 332
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 3e-11
Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 107 GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAA 166
G+ EY + L K+ PD + L P TAY G E + + G V V A
Sbjct: 122 GFAEYVRVPADFNLAKL-PD---GIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA 177
Query: 167 SGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP 225
G +G L LAKL G V+ S ++++L K G D N +++ L+
Sbjct: 178 -GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGG 236
Query: 226 QGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284
+G D+ + VG LD AL +R G + V G+ Y +V+K +T++
Sbjct: 237 RGADVVIEAVGSPPALDQALEALRPGGTVVVVGV-----YGGEDIPLPAGLVVSKELTLR 291
Query: 285 GFLQSDYLHLYPRFLDYVISN-YKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
G L+ + R LD + S K++ L++A A+ K +VV
Sbjct: 292 GSLRPSGREDFERALDLLASGKIDPEKLI---THRLPLDDAAEAYELFADRKEEAIKVV 347
|
Length = 350 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215
+GE V V+ ASG VG + QLAK G V+ AG++ K + ++ LG D D
Sbjct: 176 GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGAD-TVILRDAPL 232
Query: 216 LVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG-----MVSLHSYHDPQGI 270
L A K + +D+ D VGG + L +R GR G +V L
Sbjct: 233 LADA-KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVEL--------- 282
Query: 271 HNLFTLVTKRITMKGF-LQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFV 329
+L TL K +T+ G L + ++ R + Y+ ++G+I V L A
Sbjct: 283 -DLRTLYLKDLTLFGSTLGTR--EVFRRLVRYI----EEGEIRPVVAKTFPLSEIREAQA 335
Query: 330 GLFSGKNVGKQVV 342
++VGK V+
Sbjct: 336 EFLEKRHVGKLVL 348
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 8e-11
Identities = 66/203 (32%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA------GLTGWEEYSLIRKTEQLRKIQPD 126
PF+PG + G VV+S++P FKPGD V G++ YS + ++ +
Sbjct: 58 PFIPGIDLAG----TVVESNDPRFKPGDEVIVTSYDLGVSHHGGYS------EYARVPAE 107
Query: 127 HHIPLSYHIGL-----LGMPGFTAYAGFHEV----CSPKSGEYVFVSAASGAVGQL-VGQ 176
+PL + L LG GFTA H + +P+ G V V+ A+G VG L V
Sbjct: 108 WVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSI 166
Query: 177 LAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET-DLVAALKRCFPQGIDIYFDNV 235
LAKL G VV S G + D LK KLG E + + + L++ G D V
Sbjct: 167 LAKL-GYEVVASTGKADAADYLK-KLGAKEVIPREELQEESIKPLEKQRWAGA---VDPV 221
Query: 236 GGEMLDAALLNMRDHGRIAVCGM 258
GG+ L L ++ G +AV G+
Sbjct: 222 GGKTLAYLLSTLQYGGSVAVSGL 244
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 1e-10
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPN-FKPGDLVAGLTG---------WEEYSLIRKTEQLRK 122
P V G +E G V+ F PG VA G + EY+L+ EQ+
Sbjct: 57 PRVLG--IEAVGE---VEEAPGGTFTPGQRVATAMGGMGRTFDGSYAEYTLVP-NEQVYA 110
Query: 123 IQPDHHIPLSYHIGLLGMP--GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL 180
I D LS+ L +P +TA+ + G+ + + + +VG +LAK
Sbjct: 111 IDSD----LSWAE-LAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKA 165
Query: 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240
G V + S ++ LLK +LG DE D+ + L+ P G D + VG L
Sbjct: 166 LGATVTATTRSPERAALLK-ELGADEVV--IDDGAIAEQLRA-APGGFDKVLELVGTATL 221
Query: 241 DAALLNMRDHGRIAVCGMVS 260
+L ++R G + + G++
Sbjct: 222 KDSLRHLRPGGIVCMTGLLG 241
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 3e-09
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
L + G TA P G V V+ ASG VG+ QLA L G +VV GS + +
Sbjct: 114 LPVAGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
L+ + ++ + P +D+ D+VGG L AL + G + G
Sbjct: 173 LRELGAAEVVVGGSELSGA--------P--VDLVVDSVGGPQLARALELLAPGGTVVSVG 222
Query: 258 MVS 260
S
Sbjct: 223 SSS 225
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 8e-09
Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 53/306 (17%)
Query: 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT 67
K ++ Y G P E E+ + ++ P + L+K +P G ++ +
Sbjct: 2 KALLLEEY--GKPLEV-KELSLPEPEVPEPGPGE---VLIKVEAAPINPSDLGFLKGQYG 55
Query: 68 SSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDL--------VAGLTG----WEEYSLIR 115
S+ P PG EG G VV + G L VA L G + EY++
Sbjct: 56 STKALPVPPG--FEGSGT--VVAA-----GGGPLAQSLIGKRVAFLAGSYGTYAEYAVA- 105
Query: 116 KTEQLRKIQPDHHIPLSYHIGL-LGMPGF----TAYAGFHEVCSPKSGEYVFVSAASGAV 170
+Q +PL + G F TA G E + + V +AA+ A+
Sbjct: 106 DAQQC--------LPLPDGVSFEQGASSFVNPLTAL-GMLETAREEGAKAVVHTAAASAL 156
Query: 171 GQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET---DLVAALKRCFPQG 227
G+++ +L K G V+ ++VDLLK K+G + N +D DL + +
Sbjct: 157 GRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDPDFLEDLKELIAK---LN 212
Query: 228 IDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287
I+FD VGG + LL M + V G +S + I + L+ K +++GF
Sbjct: 213 ATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSG---KLDEPI-DPVDLIFKNKSIEGFW 268
Query: 288 QSDYLH 293
+ +L
Sbjct: 269 LTTWLQ 274
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 2e-07
Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 24/247 (9%)
Query: 104 GLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFV 163
G + + EY+++ + L KI PD PL LLG T + G+ V V
Sbjct: 136 GCSTFAEYTVVHEI-SLVKIDPD--APLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAV 191
Query: 164 SAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222
G VG Q AK G ++ + +K++L K K G N + D+V A+
Sbjct: 192 FGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVE 249
Query: 223 CFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRI 281
G D F+ VG E++ A L G ++ + F LVT R
Sbjct: 250 LTDGGADYAFECVGNVEVMRQA-LEATHRG--GTSVIIGVAGAGQEIST-RPFQLVTGR- 304
Query: 282 TMKGFLQSDYLHLY--PRFLDYVISNYKQGKIVYVEDM---NEGLENAPAAFVGLFSGKN 336
KG PR +D Y GK+ ++ + LE+ AF + GK+
Sbjct: 305 VWKGSAFGGARPRSDIPRLVDL----YMAGKLP-LDRLVTHTIPLEDINEAFDLMHEGKS 359
Query: 337 VGKQVVR 343
+ + V+R
Sbjct: 360 I-RSVIR 365
|
Length = 366 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Query: 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 203
T Y K GE V V G +G Q+AK G V+ +K++L K +LG
Sbjct: 152 TPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELG 209
Query: 204 FDEAFNYNDET--DLVAALKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVS 260
DE N D++ D AA G D+ FD VG + A ++ GRI V G
Sbjct: 210 ADEVLNSLDDSPKDKKAAGL---GGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVG--- 263
Query: 261 LHSYHDPQGIHNLFTLVTKRITMKG 285
+ +L L+ + + + G
Sbjct: 264 ---LGRDKLTVDLSDLIARELRIIG 285
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 32/196 (16%)
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215
K GE V V+ A G VG Q+AK G V+ S K ++ Y D
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS---------KYAD--Y 209
Query: 216 LVAALKRCFPQ------GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQG 269
++ K F + G DI + VG L+ +L ++ G+I G V DP
Sbjct: 210 VIVGSK--FSEEVKKIGGADIVIETVGTPTLEESLRSLNMGGKIIQIGNV------DPSP 261
Query: 270 IHNLFT--LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAA 327
++L ++ K I + G + + R ++ + +GKI V L A
Sbjct: 262 TYSLRLGYIILKDIEIIGHISAT-----KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKA 316
Query: 328 FVGLFSGKNVGKQVVR 343
L +GK +V+
Sbjct: 317 LEELKDKSRIGKILVK 332
|
Length = 334 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 6e-06
Identities = 59/196 (30%), Positives = 81/196 (41%), Gaps = 43/196 (21%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA---------------------------G 104
PP VPG E GV V S FK GD VA G
Sbjct: 52 PPLVPGH--EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVG 109
Query: 105 LT---GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYV 161
+T G+ EY ++ Q+ KI PD+ LS+ L P A G ++ K G+ V
Sbjct: 110 VTRNGGFAEYVVVPAK-QVYKI-PDN---LSFEEAALAEPLSCAVHG-LDLLGIKPGDSV 163
Query: 162 FVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220
V A G +G L+ QL KL+G V + + +K++L K KLG E + + A
Sbjct: 164 LVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATET--VDPSREDPEAQ 219
Query: 221 KRCFPQGIDIYFDNVG 236
K P G D+ + G
Sbjct: 220 KEDNPYGFDVVIEATG 235
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 6/153 (3%)
Query: 107 GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAA 166
G EY+++ T L + + + +LG GFTAY + GE V V
Sbjct: 141 GLAEYAVVPAT-ALAPLPES--LDYTE-SAVLGCAGFTAYGALKHAADVRPGETVAVIGV 196
Query: 167 SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ 226
G VG QLAK G + + + +LG N E + A + +
Sbjct: 197 -GGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGR 255
Query: 227 GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258
G+D+ + +G E AL +RD GR V G+
Sbjct: 256 GVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 9e-06
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 55 DPYMRGRMRSSFTSSYIPPFVP-GQPVEGFGVSKVVDSDNPNFKPGDLVA-GLTGWEEYS 112
D Y+R + Y PP +P G E GV V S + K GD V + YS
Sbjct: 44 DTYIRSGL-------YPPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYS 96
Query: 113 LIRK-TEQLRKIQPDHHIPLSYHIGLLG-MPGFTAYAGFHEVCSPKSGEYVFVSAASGAV 170
+ I PD +S+ + G T Y + K E AA+G V
Sbjct: 97 SVHNVPADKAAILPDA---ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV 153
Query: 171 GQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET--DLVAALKRCFPQGI 228
G + Q AK G ++G+ GS+QK K G + NY +E + V + + +
Sbjct: 154 GLIACQWAKALGAKLIGTVGSAQKAQRAKKA-GAWQVINYREENIVERVKEITG--GKKV 210
Query: 229 DIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS 260
+ +D+VG + +A+L ++ G MVS
Sbjct: 211 RVVYDSVGKDTWEASLDCLQRRGL-----MVS 237
|
Length = 327 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 36/159 (22%)
Query: 142 GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK 201
G T Y + K G++V +S A G +G L Q AK G V+ +K++L K +
Sbjct: 151 GVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208
Query: 202 LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAAL------------LNM-R 248
LG D ++ ++D V A+K GG A + L+ R
Sbjct: 209 LGADAFVDF-KKSDDVEAVKELT-----------GGGGAHAVVVTAVSAAAYEQALDYLR 256
Query: 249 DHGRIAVCGMVSLHSYHDPQGIHNL--FTLVTKRITMKG 285
G + G+ P G L F LV + IT+ G
Sbjct: 257 PGGTLVCVGL-------PPGGFIPLDPFDLVLRGITIVG 288
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 16/191 (8%)
Query: 102 VAGLTG-WEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEY 160
VA + G W EY + + L + PD I L+ MP +A + K G++
Sbjct: 88 VAPVHGTWAEYFVA-PADGLVPL-PDG-ISDEVAAQLIAMP-LSALMLLDFL-GVKPGQW 142
Query: 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220
+ +AA GAVG+LV LA G V+ V L LG + ++ +
Sbjct: 143 LIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVS-TEQPGWQDKV 200
Query: 221 KRCFPQG--IDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT 278
+ G I + D+VGG++ L + + G + G +S G L+
Sbjct: 201 RE-AAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSG-----DLIF 254
Query: 279 KRITMKGFLQS 289
K+ T++GF
Sbjct: 255 KQATVRGFWGG 265
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 28/158 (17%)
Query: 107 GWEEYSLIRKTEQLRKIQPDHH---IPLSYHIGL---LGMPGFTAYAGFHEV-CSPKSGE 159
G+ EY ++ P+ + IP S L L + TAY P GE
Sbjct: 117 GYAEYIVV----------PEKNLFKIPDSISDELAASLPVAALTAYHALKTAGLGP--GE 164
Query: 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219
V V ASG G QLAK+ G V+ A S + D LK + G DE +Y++ + V
Sbjct: 165 TVVVFGASGNTGIFAVQLAKMMGAEVI--AVSRK--DWLK-EFGADEVVDYDEVEEKVKE 219
Query: 220 LKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
+ + D+ +++G D +L + GR+ G
Sbjct: 220 ITKMA----DVVINSLGSSFWDLSLSVLGRGGRLVTFG 253
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 167 SGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP 225
+G +G L Q K+ G V+ +K+ + + +LG D+ N E D+ +
Sbjct: 168 AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTIN-PKEEDVEKVRELTEG 225
Query: 226 QGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF-TLVTKRITM 283
+G D+ + G ++ AL R G++ + G+ Y D F ++ K +T+
Sbjct: 226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIP----YGDVTLSEEAFEKILRKELTI 281
Query: 284 KGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE---GLENAPAAF 328
+G S + GKI VE + LE+ PAAF
Sbjct: 282 QGSWNSYSAPFPGDEWRTALDLLASGKIK-VEPLITHRLPLEDGPAAF 328
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 150 HEVCSPKSGEYVFVSAASGAVGQLVGQL-----AKLHGCY-VVGSAGSSQKVDL------ 197
V P+ G + V A GAVG L AK+ GC ++ VD+
Sbjct: 179 LNVLKPRPGSSIAVFGA-GAVG-----LAAVMAAKIAGCTTIIA-------VDIVDSRLE 225
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVC 256
L +LG N E DLVAA++ G+D D G +++ A+ + G +A+
Sbjct: 226 LAKELGATHVIN-PKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALV 284
Query: 257 GMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD-YLHLY-PRFLDYVISNYKQG----- 309
G + + ++ L+ T++G ++ D + PR ++ Y+QG
Sbjct: 285 GAPPPGA---EVTL-DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIEL----YRQGKFPFD 336
Query: 310 KIV--Y-VEDMNEGLENA 324
K+V Y ED+N+ + ++
Sbjct: 337 KLVTFYPFEDINQAIADS 354
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 64/310 (20%), Positives = 101/310 (32%), Gaps = 57/310 (18%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA---------------------------G 104
P VPG E GV V D ++ GD V G
Sbjct: 54 LPHVPGH--EFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG 111
Query: 105 LTGW----EEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGE 159
T E ++ R L ++ D + + LG TA+ K GE
Sbjct: 112 FTHPGSFAEYVAVPRADVNLVRLPDD----VDFVTAAGLGCRFATAFRALVHQARVKPGE 167
Query: 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219
+V V G VG +A G V+ K++L + +LG N ++ D+ AA
Sbjct: 168 WVAVHGC-GGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVEDVAAA 225
Query: 220 LKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT 278
++ G + D +G E ++ ++R GR G+ G L
Sbjct: 226 VRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGL--------TLGEEAGVALPM 277
Query: 279 KRITMK--GFLQSDYL--HLYPRFLDYVISN-YKQGKIVYVEDMNEGLENAPAAFVGLFS 333
R+ + + S + H Y L + S +V L+ AP A +
Sbjct: 278 DRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLVGRT---ISLDEAPDALAAMDD 334
Query: 334 GKNVGKQVVR 343
G V+
Sbjct: 335 YATAGITVIT 344
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 142 GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK 201
G T Y+ P+ GE V V G +G L Q A+ G V S K +L + K
Sbjct: 148 GITVYSAL-RDAGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-K 204
Query: 202 LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV-GGEMLDAALLNMRDHGRIAVCGM 258
LG DE + E D AA G D+ V G +AAL +R GRI + G+
Sbjct: 205 LGADEVVDSGAELDEQAAAG-----GADVILVTVVSGAAAEAALGGLRRGGRIVLVGL 257
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 202 LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRI 253
LG DE +Y D A +G+D+ D VGGE L ALL ++ GR+
Sbjct: 1 LGADEVIDY-TTEDFEEAT---AGEGVDVVLDTVGGETLLRALLALKPGGRL 48
|
Length = 129 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 57/229 (24%), Positives = 81/229 (35%), Gaps = 33/229 (14%)
Query: 43 GAFLVKNLY---LSCDPY--MRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFK 97
G LV+ D +GR + P PG EG+G +
Sbjct: 20 GQVLVRVEGCGVCGSDLPAFNQGRP---WFVYPAEPGGPGH--EGWGRVVALGPGVRGLA 74
Query: 98 PGDLVAGLT--GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGF-----TAYAGFH 150
GD VAGL+ + EY L DH +PL L G A F
Sbjct: 75 VGDRVAGLSGGAFAEYDL---------ADADHAVPLP--SLLDGQAFPGEPLGCALNVF- 122
Query: 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210
++G+ V V A G +G L QLA G V + L +LG E
Sbjct: 123 RRGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVT- 180
Query: 211 NDETDLVAALKRCFP-QGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCG 257
+D +V ++ G D+ + VG LD A + + GR+ + G
Sbjct: 181 DDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFG 229
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 50/234 (21%)
Query: 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKL 202
T Y E+ K G+ V V G VG + AKL G V+ +++++ ++ L
Sbjct: 172 TGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHL 229
Query: 203 GFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGE----------------------M 239
G E N+ + D+V AL+ +G D+ D VG E
Sbjct: 230 GA-ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDA 288
Query: 240 LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF---TLVTKRITMKGFLQSDYLHLYP 296
L A+ +R G +++ G G N F + K +T++ Q+ P
Sbjct: 289 LREAIQAVRKGGTVSIIG--------VYGGTVNKFPIGAAMNKGLTLRMG-QTHVQRYLP 339
Query: 297 RFLDYVISNYKQGKIVYVEDM---NEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
R L+ + + G++ + LE+AP A+ +F K G ++V +
Sbjct: 340 RLLELI----ESGEL-DPSFIITHRLPLEDAPEAY-KIFDKKEDG--CIKVVLK 385
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 16/188 (8%)
Query: 107 GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAA 166
G+ EY L+ + E L ++ P++ LS L P A E + G+ V V
Sbjct: 119 GFAEYVLVPE-ESLHEL-PEN---LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG- 172
Query: 167 SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL-LKNKLGFDEAFNYNDETDLVAALK-RCF 224
G +G L Q+AKL G VV +V L + +LG D E DL +
Sbjct: 173 PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV--NGGEEDLAELVNEITD 230
Query: 225 PQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283
G D+ + G L+ AL +R GRI G+ + ++ ++ K +++
Sbjct: 231 GDGADVVIECSGAVPALEQALELLRKGGRIVQVGI-----FGPLAASIDVERIIQKELSV 285
Query: 284 KGFLQSDY 291
G S
Sbjct: 286 IGSRSSTP 293
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 347 | |||
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 100.0 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.98 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 99.97 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.78 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.74 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.51 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.39 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.35 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 98.5 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.46 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.42 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.34 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.32 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.29 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.27 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.26 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.14 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 98.1 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.08 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.06 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.06 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.96 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.95 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.92 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.92 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 97.9 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.87 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.86 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.86 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.74 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.73 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.69 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.69 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.69 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 97.66 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.64 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.63 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.58 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 97.53 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.5 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.49 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.49 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.47 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.47 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 97.47 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.47 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.46 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.46 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.46 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 97.45 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.44 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.44 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 97.43 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.42 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.4 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.39 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 97.37 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.36 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.36 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.34 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.32 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.32 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.31 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.31 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.31 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.3 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 97.3 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.29 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.28 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.28 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.27 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.27 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.25 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.25 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.24 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.22 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.21 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.2 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.19 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.18 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.17 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.17 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 97.16 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.16 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.16 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.16 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.16 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.16 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.15 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.15 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.14 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.14 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.14 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.14 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.12 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.12 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.11 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.1 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.08 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.08 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.08 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 97.07 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.07 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.07 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.06 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.06 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.06 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.04 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.04 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.03 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.03 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.03 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 97.03 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.01 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.0 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 97.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.99 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 96.99 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 96.99 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.99 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.98 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.98 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 96.97 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.96 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.96 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 96.96 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 96.95 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.94 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 96.94 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 96.93 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 96.93 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 96.93 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 96.93 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 96.92 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.92 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.92 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.9 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.89 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.89 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 96.88 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 96.88 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 96.88 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.88 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.87 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 96.86 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.86 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.85 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.85 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 96.84 | |
| PLN02476 | 278 | O-methyltransferase | 96.83 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 96.83 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 96.82 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 96.82 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.81 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.81 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 96.8 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 96.8 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.79 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 96.78 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.77 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 96.77 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 96.76 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.76 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 96.75 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 96.75 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 96.74 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.74 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 96.74 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.73 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.72 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 96.71 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.71 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.68 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 96.68 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 96.67 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 96.67 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 96.67 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.66 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.65 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.63 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 96.62 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.61 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 96.61 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 96.6 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 96.59 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.58 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 96.57 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 96.57 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 96.57 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 96.56 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 96.53 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 96.53 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 96.53 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 96.51 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 96.51 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 96.51 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 96.51 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.5 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 96.5 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.49 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 96.49 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 96.48 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 96.48 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 96.48 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.47 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 96.46 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 96.45 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.45 | |
| PLN02366 | 308 | spermidine synthase | 96.44 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.42 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 96.42 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 96.41 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 96.41 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 96.41 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.4 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 96.4 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 96.4 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 96.38 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 96.38 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.37 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.36 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 96.35 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.35 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 96.35 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 96.34 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.34 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 96.32 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 96.32 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.32 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.31 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.3 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.3 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.29 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 96.29 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.28 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.28 | |
| PLN00015 | 308 | protochlorophyllide reductase | 96.28 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.27 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 96.27 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.26 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 96.25 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.24 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 96.23 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.23 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 96.22 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 96.21 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 96.19 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 96.18 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 96.17 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.15 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.15 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.14 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.13 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.12 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 96.1 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 96.1 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 96.08 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.08 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 96.07 | |
| PRK00536 | 262 | speE spermidine synthase; Provisional | 96.06 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.05 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.03 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.03 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 96.0 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.99 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.98 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 95.96 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 95.96 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 95.95 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 95.92 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.92 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 95.92 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 95.92 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.9 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 95.89 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 95.85 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.84 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.83 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 95.81 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 95.81 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 95.8 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.78 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 95.78 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 95.78 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 95.76 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 95.76 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 95.71 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 95.69 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 95.69 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 95.68 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.67 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 95.64 | |
| COG0421 | 282 | SpeE Spermidine synthase [Amino acid transport and | 95.63 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 95.63 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 95.62 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.62 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.59 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.56 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 95.54 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 95.53 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 95.53 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 95.53 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 95.52 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 95.52 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 95.52 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.52 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 95.5 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 95.5 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 95.49 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 95.47 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 95.47 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 95.46 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 95.46 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 95.44 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 95.44 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.43 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 95.39 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 95.37 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 95.34 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 95.34 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 95.32 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 95.29 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 95.29 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.23 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 95.22 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.21 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.16 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.15 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.14 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 95.11 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 95.06 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 95.05 | |
| KOG1252 | 362 | consensus Cystathionine beta-synthase and related | 95.02 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.0 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 94.99 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 94.99 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.98 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.96 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 94.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 94.94 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 94.89 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 94.88 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 94.87 | |
| PLN02823 | 336 | spermine synthase | 94.83 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 94.81 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 94.79 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 94.74 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 94.72 | |
| PLN02928 | 347 | oxidoreductase family protein | 94.71 | |
| COG0031 | 300 | CysK Cysteine synthase [Amino acid transport and m | 94.69 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.68 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.65 | |
| KOG3201 | 201 | consensus Uncharacterized conserved protein [Funct | 94.65 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 94.63 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 94.62 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 94.59 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 94.59 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 94.58 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 94.58 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 94.57 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 94.57 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 94.55 |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-56 Score=387.38 Aligned_cols=306 Identities=26% Similarity=0.388 Sum_probs=273.7
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
|.+|||++++++ ++| +++ .+++.|.|. |+||+|+|+|||+|++|++.++|.|.... +|+|||||.+|
T Consensus 1 ~~~mkA~~~~~~--~~p----l~i--~e~~~p~p~---~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG- 67 (339)
T COG1064 1 MMTMKAAVLKKF--GQP----LEI--EEVPVPEPG---PGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVG- 67 (339)
T ss_pred CcceEEEEEccC--CCC----ceE--EeccCCCCC---CCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEE-
Confidence 356999999998 766 345 557777674 99999999999999999999999885444 89999999777
Q ss_pred eEEEEeccCCCCCCCCCEEEE-e------------------------------cCcceeEEeeccccceecCCCCCCChh
Q 019012 84 GVSKVVDSDNPNFKPGDLVAG-L------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLS 132 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~-~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~ 132 (347)
+|+++|++|++||+||||.. + |+|+||+++++++ ++++ |++ ++
T Consensus 68 -~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~-~~~i-P~~---~d 141 (339)
T COG1064 68 -TVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARY-VVKI-PEG---LD 141 (339)
T ss_pred -EEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHH-eEEC-CCC---CC
Confidence 99999999999999999975 2 7999999999999 9999 999 77
Q ss_pred hh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 133 YH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 133 ~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
++ +|.+.+.+.|+|++| +..+++||++|+|+|+ |++|++++|+|+++|++|++++++++|.+.++ ++|++++++.+
T Consensus 142 ~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~ 218 (339)
T COG1064 142 LAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSS 218 (339)
T ss_pred hhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcC
Confidence 75 899999999999999 5599999999999997 89999999999999999999999999999999 99999999988
Q ss_pred CHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 212 DETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
++ +..+.+++. +|+++|+++...++.++++|+++|+++.+|.+... .....+...++.+++++.|+...+
T Consensus 219 ~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~----~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 219 DS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGG----PIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred Cc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCc----ccCCCCHHHhhhcCeEEEEEecCC-
Confidence 65 777777753 99999999976899999999999999999987421 233466778899999999999988
Q ss_pred cchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 292 LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
..++++++++..+|.+++.+.+.++++|+++|++.|.+++..||+||++.
T Consensus 289 ----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 78899999999999999999877899999999999999999999999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=374.94 Aligned_cols=316 Identities=32% Similarity=0.472 Sum_probs=275.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.++ |.|+ .++..++|.|.|. ++||||||+|++||+.|...+.|........|.|||.|++| +|
T Consensus 1 mka~~~~~~--g~~~----~l~~~e~~~P~p~---~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG--~V 69 (326)
T COG0604 1 MKAVVVEEF--GGPE----VLKVVEVPEPEPG---PGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAG--VV 69 (326)
T ss_pred CeEEEEecc--CCCc----eeEEEecCCCCCC---CCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEE--EE
Confidence 789999998 8886 3666778988875 99999999999999999999998644445679999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGE 159 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~ 159 (347)
+++|++|++|++||||+.+ |+|+||+.+|++. ++++ |++ ++++ +|+++..++|||++|....++++|+
T Consensus 70 ~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~-P~~---ls~~eAAal~~~~~TA~~~l~~~~~l~~g~ 144 (326)
T COG0604 70 VAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADW-LVPL-PDG---LSFEEAAALPLAGLTAWLALFDRAGLKPGE 144 (326)
T ss_pred EEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHH-ceeC-CCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999987 7999999999998 9999 999 8986 8999999999999999989999999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~ 238 (347)
+|||+||+|++|.+++|+|+++|+++++++.++++.++++ ++|++++++|+++ ++.+++++++++ ++|+|||++|++
T Consensus 145 ~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~ 222 (326)
T COG0604 145 TVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGD 222 (326)
T ss_pred EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHH
Confidence 9999999999999999999999987777777777778888 9999999999997 899999999998 999999999999
Q ss_pred hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeeec
Q 019012 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
.+..++++|+++|+++.+|...+ . .....+...++.+.+...+...... ++...+.++++.+++++|.+++.+..
T Consensus 223 ~~~~~l~~l~~~G~lv~ig~~~g-~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~ 298 (326)
T COG0604 223 TFAASLAALAPGGRLVSIGALSG-G---PPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDR 298 (326)
T ss_pred HHHHHHHHhccCCEEEEEecCCC-C---CccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceecc
Confidence 99999999999999999998763 1 2233446777888888888776533 34556788999999999999999999
Q ss_pred ccccccHHHHHHHhhc-CcccceEEEEe
Q 019012 318 NEGLENAPAAFVGLFS-GKNVGKQVVRV 344 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~-~~~~gk~vv~~ 344 (347)
+||+++...+..+... ++..||+||++
T Consensus 299 ~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 299 VYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred EechhhhHHHHHHHHcccCCcceEEEeC
Confidence 9999995444443333 57889999874
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-50 Score=327.46 Aligned_cols=321 Identities=23% Similarity=0.302 Sum_probs=278.1
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
.++..|.+++++. |.++ .++.++.|.|.|. |+|.+||..|+|+|..|..++.|.|. ..+.|++||.|.+|
T Consensus 5 ~p~~~k~i~v~e~--Ggyd----vlk~ed~pv~~pa---pgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaG 74 (336)
T KOG1197|consen 5 SPPLLKCIVVTEF--GGYD----VLKLEDRPVPPPA---PGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAG 74 (336)
T ss_pred CCchheEEEEecc--CCcc----eEEEeeecCCCCC---CCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccce
Confidence 3566789999999 9887 5555667777675 99999999999999999998888774 56679999999666
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCC
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSG 158 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~ 158 (347)
+|++||++|+++++||||+-. |.|+++..+|... ++++ |+. ++++ +|++...++|||..+++..++++|
T Consensus 75 --vVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~k-v~~v-pe~---i~~k~aaa~llq~lTAy~ll~e~y~vkpG 147 (336)
T KOG1197|consen 75 --VVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVK-VFKV-PEA---ITLKEAAALLLQGLTAYMLLFEAYNVKPG 147 (336)
T ss_pred --EEEEecCCccccccccEEEEeccchhhheecccccee-eccC-Ccc---cCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999976 7999999999998 9999 999 8885 888889999999999999999999
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 237 (347)
++||++.|+|++|++++|+++..|++++++.++.+|.+.++ +.|+++.|+++.+ |+.+++.++|.| |+|+++|++|.
T Consensus 148 htVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~ 225 (336)
T KOG1197|consen 148 HTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGK 225 (336)
T ss_pred CEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccc
Confidence 99999999999999999999999999999999999999999 9999999999998 999999999988 99999999999
Q ss_pred hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc---cchhHHHHHHHHHHHHCCceeee
Q 019012 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY---LHLYPRFLDYVISNYKQGKIVYV 314 (347)
Q Consensus 238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i~~~ 314 (347)
+++...+.+|++.|.+|++|..++. ..++++..+..+++.+.-..+..+ +........+++.++.+|.+++.
T Consensus 226 dt~~~sl~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~ 300 (336)
T KOG1197|consen 226 DTFAKSLAALKPMGKMVSFGNASGL-----IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH 300 (336)
T ss_pred hhhHHHHHHhccCceEEEeccccCC-----CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee
Confidence 9999999999999999999998774 233444444444444432222222 22223456778888889999999
Q ss_pred eecccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 315 EDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 315 ~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
+..+|||+++.+|+.++++++..||+++.+.+|
T Consensus 301 I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 301 IDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred eeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 999999999999999999999999999988765
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-48 Score=355.42 Aligned_cols=337 Identities=79% Similarity=1.282 Sum_probs=278.9
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEe-ecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKIS-GIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
..++|+|.+.+++.|.|.+.+|++.++ +.+.|.|.+ ++||||||.|+++||.|+..+.+.. ....+|.++|+++.|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~--~gevlVkv~a~~inp~~~~~~~~~~-~~~~~p~~~G~~~~~ 82 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKG--SGAFLVKNLYLSCDPYMRGRMRDFH-DSYLPPFVPGQRIEG 82 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCC--CCeEEEEEEEEccCHHHHHhhhccC-CCCCCCcCCCCeeEe
Confidence 356799999999999999999998885 466665556 9999999999999999986544322 223468999997777
Q ss_pred ceEEEEeccCCCCCCCCCEEEEecCcceeEEeeccc-cc--eecCCCCCCChhh--hhhhcCChhhhHHHHHHhhcCCCC
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTE-QL--RKIQPDHHIPLSY--HIGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~--~~i~p~~~~~~~~--~~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
.|+|..+|+++++|++||+|+++|+|++|+.++++. .+ +++ |++ +++ ++|+++++++|||+++.+.+++++
T Consensus 83 ~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~---~~~~~~aa~l~~~~~TA~~al~~~~~~~~ 158 (348)
T PLN03154 83 FGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDD---IPLSYHLGLLGMAGFTAYAGFYEVCSPKK 158 (348)
T ss_pred eEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCC---CCHHHHHHHcccHHHHHHHHHHHhcCCCC
Confidence 779999999999999999999999999999999742 14 345 777 665 367999999999999988889999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
|++|||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++|+++..++.+.+++.+++++|++||++|+
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~ 238 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGG 238 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCH
Confidence 99999999999999999999999999999999999998988646999999998742167778888776689999999999
Q ss_pred hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeec
Q 019012 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
..+..++++++++|+++.+|..............+...++.+++++.|+....+.....+.++++++++++|++++.+..
T Consensus 239 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~ 318 (348)
T PLN03154 239 DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDM 318 (348)
T ss_pred HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceec
Confidence 89999999999999999999764421110001124556788899999887654333345678999999999999998888
Q ss_pred ccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 318 NEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
+++|+++++|++.+.+++..||+||++.+|
T Consensus 319 ~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 319 SEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 899999999999999999999999999875
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-48 Score=326.49 Aligned_cols=312 Identities=21% Similarity=0.263 Sum_probs=268.1
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
.+.+.++|.++.+ +.. +.+...+++.|++. ++||+|+|+||||||+|++.+.|.|.. ...|+|+|||.+|
T Consensus 6 ~p~k~~g~~~~~~--~G~----l~p~~~~~~~~~~g---~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG 75 (360)
T KOG0023|consen 6 IPEKQFGWAARDP--SGV----LSPEVFSFPVREPG---ENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAG 75 (360)
T ss_pred CchhhEEEEEECC--CCC----CCcceeEcCCCCCC---CCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeE
Confidence 3567788999987 443 24444568878774 999999999999999999999998854 7789999999666
Q ss_pred ceEEEEeccCCCCCCCCCEEEE-e-------------------------------------cCcceeEEeeccccceecC
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAG-L-------------------------------------TGWEEYSLIRKTEQLRKIQ 124 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~-~-------------------------------------g~~~~~~~v~~~~~~~~i~ 124 (347)
+|++||++|++|++||+|-. + |+|++|+++++.. +++|
T Consensus 76 --~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~-a~kI- 151 (360)
T KOG0023|consen 76 --VVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVF-AIKI- 151 (360)
T ss_pred --EEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeee-EEEC-
Confidence 99999999999999999941 0 5799999999999 9999
Q ss_pred CCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC
Q 019012 125 PDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 203 (347)
Q Consensus 125 p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g 203 (347)
|++ ++.+ +|.+.+.+.|+|.+| ...++.||+++-|.|+ |++|.+++|+|+++|.+|+++++++++.+.+-+.||
T Consensus 152 P~~---~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG 226 (360)
T KOG0023|consen 152 PEN---LPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG 226 (360)
T ss_pred CCC---CChhhccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC
Confidence 999 6665 899999999999999 6688999999999997 669999999999999999999999855555543899
Q ss_pred CCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEe
Q 019012 204 FDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283 (347)
Q Consensus 204 ~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
++..++..++.++.+.+.+.+++++|-+.+. ..-.++.++++|+.+|++|.+|.+.. ...+....+..+.+++
T Consensus 227 Ad~fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 227 ADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSI 299 (360)
T ss_pred cceeEEecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEE
Confidence 9999998833388999998888777777766 33578999999999999999998754 2456677889999999
Q ss_pred eccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 284 KGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
.|+..++ ....++++++.+.+.+++.+..+ +++++++|+++|.+++..+|.||++..
T Consensus 300 ~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE~v-~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 300 KGSIVGS-----RKETQEALDFVARGLIKSPIELV-KLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred Eeecccc-----HHHHHHHHHHHHcCCCcCceEEE-ehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 9999988 77799999999999999987755 999999999999999999999998864
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-48 Score=325.57 Aligned_cols=312 Identities=22% Similarity=0.257 Sum_probs=267.0
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCC--CCCCCCCCce
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSY--IPPFVPGQPV 80 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~--~~p~i~G~e~ 80 (347)
|...|+|+++.+. + ++.+ ++.|.|++.+ |+||+|++.++|||.+|+|.+....-+.+ ..|+++|||.
T Consensus 1 ~~~~~~A~vl~g~--~-----di~i--~~~p~p~i~~--p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEs 69 (354)
T KOG0024|consen 1 MAADNLALVLRGK--G-----DIRI--EQRPIPTITD--PDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHES 69 (354)
T ss_pred CCcccceeEEEcc--C-----ceeE--eeCCCCCCCC--CCEEEEEeeeEEecCccchhhccCCcCcccccccccccccc
Confidence 3467899999997 4 3345 4788888867 99999999999999999998887654332 4699999999
Q ss_pred ecceEEEEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCC
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHI 129 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~ 129 (347)
+| +|.++|+.|+++|+||||+.- |++++|++.+++. ++|+ |++
T Consensus 70 sG--iV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~df-c~KL-Pd~-- 143 (354)
T KOG0024|consen 70 SG--IVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADF-CYKL-PDN-- 143 (354)
T ss_pred cc--chhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHh-eeeC-CCC--
Confidence 98 999999999999999999831 7999999999999 9999 999
Q ss_pred ChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeee
Q 019012 130 PLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAF 208 (347)
Q Consensus 130 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi 208 (347)
+|++.++|..+++++|||+ +++++++|++|||+|| |++|+++...|+++|+ +|++++-.+.|++.++ ++|++.+.
T Consensus 144 -vs~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~ 219 (354)
T KOG0024|consen 144 -VSFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTD 219 (354)
T ss_pred -Cchhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEe
Confidence 9999999999999999999 6799999999999997 9999999999999999 9999999999999999 89998776
Q ss_pred ecCCH---HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEe
Q 019012 209 NYNDE---TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283 (347)
Q Consensus 209 ~~~~~---~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
+.... +++.+.+++..++ .+|+.|||+|. ..++.++.+++.+|+++.+|+-.. ...++......+++++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~~v~~kE~~~ 293 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPIIDVALKEVDL 293 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChhhhhhheeee
Confidence 55442 2566667766665 79999999996 589999999999999999987443 3456677888999999
Q ss_pred eccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcc-cceEEEEecC
Q 019012 284 KGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKN-VGKQVVRVAC 346 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~~~ 346 (347)
.|+..+. ...+..+++++++|++... ++..|+++++.+||+.+..++. .-|++|..++
T Consensus 294 ~g~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 294 RGSFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 9987765 5579999999999998865 5666799999999999988774 3388887653
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-46 Score=338.72 Aligned_cols=332 Identities=65% Similarity=1.127 Sum_probs=269.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecc--cCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQ--LKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~--~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
.|.+.++.+..+.|++..+.+++..+| .|+|. ++||||||+|++|||.|+..+.|.+.....+|.++|+++.|.|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~---~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~ 79 (338)
T cd08295 3 NKQVILKAYVTGFPKESDLELRTTKLTLKVPPGG---SGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYG 79 (338)
T ss_pred ceEEEEecCCCCCCCccceEEEEecCCcCCCCCC---CCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccE
Confidence 345566665555565677888887663 36564 9999999999999999998888743222356889999988888
Q ss_pred EEEEeccCCCCCCCCCEEEEecCcceeEEeec-cccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEE
Q 019012 85 VSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRK-TEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFV 163 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI 163 (347)
++..+|+++++|++||+|+++|+|+||+++|+ .. ++++ |.+.++.+.++|+++++++|||+++.+.+++++|++|||
T Consensus 80 ~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~-~~~l-p~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI 157 (338)
T cd08295 80 VAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQD-LRKI-DHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFV 157 (338)
T ss_pred EEEEEecCCCCCCCCCEEEecCCceeEEEecchhc-eeec-CCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 99899999999999999999999999999999 67 8998 643233333578999999999999988889999999999
Q ss_pred EcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH-cCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019012 164 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK-LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242 (347)
Q Consensus 164 ~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~ 242 (347)
+||+|++|++++|+|+.+|++|+++++++++.+.++ + +|+++++++++..++.+.+++.+++++|++||++|+..+..
T Consensus 158 ~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~ 236 (338)
T cd08295 158 SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK-NKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDA 236 (338)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHH
Confidence 999999999999999999999999999999999999 6 99999999754226777888877668999999999988999
Q ss_pred HHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccc
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLE 322 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~ 322 (347)
++++++++|+++.+|..................+..+++++.++.....+....+.++++++++.+|.+++.+...++++
T Consensus 237 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~ 316 (338)
T cd08295 237 VLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLE 316 (338)
T ss_pred HHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHH
Confidence 99999999999999875432110000112335666778888876554443334567899999999999998877778999
Q ss_pred cHHHHHHHhhcCcccceEEEEe
Q 019012 323 NAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 323 ~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
++++|++.+.+++..||+|+++
T Consensus 317 ~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 317 SAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHhcCCCCceEEEEC
Confidence 9999999999998889999874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-46 Score=310.99 Aligned_cols=331 Identities=48% Similarity=0.823 Sum_probs=291.7
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
.++.+++..++.|-|.+..+++++. +.|+| + ++|||||+.|.+++|.-+.+++... +..+|+-+|..+.|-++
T Consensus 8 ~~~~~~la~rP~g~p~~d~F~lee~--~vp~p-~--~GqvLl~~~ylS~DPymRgrm~d~~--SY~~P~~lG~~~~gg~V 80 (340)
T COG2130 8 VNRRIVLASRPEGAPVPDDFRLEEV--DVPEP-G--EGQVLLRTLYLSLDPYMRGRMSDAP--SYAPPVELGEVMVGGTV 80 (340)
T ss_pred hhheeeeccCCCCCCCCCCceeEec--cCCCC-C--cCceEEEEEEeccCHHHeecccCCc--ccCCCcCCCceeECCee
Confidence 3489999999999999888888764 45555 5 9999999999999997776666533 56779999999999656
Q ss_pred EEEeccCCCCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEc
Q 019012 86 SKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSA 165 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~G 165 (347)
.+.+-|..++|++||.|.+..+|++|..++.+. +.|+ +.+..|+++.+..|.+++.|||.+|.+.++.++|++|+|.+
T Consensus 81 ~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~-l~Kv-d~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSa 158 (340)
T COG2130 81 AKVVASNHPGFQPGDIVVGVSGWQEYAISDGEG-LRKL-DPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSA 158 (340)
T ss_pred EEEEecCCCCCCCCCEEEecccceEEEeechhh-ceec-CCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEe
Confidence 666788889999999999999999999999998 9999 55546677779999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHH
Q 019012 166 ASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALL 245 (347)
Q Consensus 166 a~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~ 245 (347)
|+|++|..+.|+||..|++|+.++.+++|.+++++.+|.+.+|||+.+ ++.+.+.+..+.++|+.||++|++.++..+.
T Consensus 159 AaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~ 237 (340)
T COG2130 159 AAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLP 237 (340)
T ss_pred cccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHH
Confidence 999999999999999999999999999999999966999999999998 9999999999999999999999999999999
Q ss_pred hhhcCCeEEEEcccccccCC-CCCCccchHHHhhcceEeecccc-ccccchhHHHHHHHHHHHHCCceeeeeeccccccc
Q 019012 246 NMRDHGRIAVCGMVSLHSYH-DPQGIHNLFTLVTKRITMKGFLQ-SDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLEN 323 (347)
Q Consensus 246 ~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~ 323 (347)
.|...+|++.+|.-+.++.. .+........++.+.+++.|+.. ..+.+...+..+++.+++++|+|+...+.+-+||+
T Consensus 238 ~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEn 317 (340)
T COG2130 238 LLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLEN 317 (340)
T ss_pred hhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhc
Confidence 99999999999987776543 22233445667777899999988 45455566999999999999999999977779999
Q ss_pred HHHHHHHhhcCcccceEEEEecC
Q 019012 324 APAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 324 ~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+++||.-+.+++..||.||++.+
T Consensus 318 aP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 318 APEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred cHHHHHHHhcCCccceEEEEecC
Confidence 99999999999999999999864
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-47 Score=322.64 Aligned_cols=309 Identities=25% Similarity=0.299 Sum_probs=264.5
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
++||.++.++ ++| +++++ +.++.|+ ++|||||+.|+|+||+|...++|.+. ..+|.++|||-+| +
T Consensus 2 k~~aAV~~~~--~~P----l~i~e--i~l~~P~---~gEVlVri~AtGVCHTD~~~~~G~~p--~~~P~vLGHEgAG--i 66 (366)
T COG1062 2 KTRAAVAREA--GKP----LEIEE--VDLDPPR---AGEVLVRITATGVCHTDAHTLSGDDP--EGFPAVLGHEGAG--I 66 (366)
T ss_pred CceEeeeecC--CCC----eEEEE--EecCCCC---CCeEEEEEEEeeccccchhhhcCCCC--CCCceeccccccc--E
Confidence 5788888888 877 56666 4445564 99999999999999999999999764 3379999999555 9
Q ss_pred EEEeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeEEe
Q 019012 86 SKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYSLI 114 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v 114 (347)
|++||++|+.+++||.|+.. ++|++|..+
T Consensus 67 Ve~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv 146 (366)
T COG1062 67 VEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVV 146 (366)
T ss_pred EEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheee
Confidence 99999999999999999721 399999999
Q ss_pred eccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 115 RKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 115 ~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
++.+ +.|+ +++ .+++ ++.+.+...|.+-++.+.+++++|++|.|.| .|++|++++|-|+..|+ ++++++.++
T Consensus 147 ~~~s-~vki-~~~---~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~ 220 (366)
T COG1062 147 HEIS-LVKI-DPD---APLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINP 220 (366)
T ss_pred cccc-eEEC-CCC---CCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCH
Confidence 9998 9999 666 5765 7888999999999998999999999999999 59999999999999999 999999999
Q ss_pred HhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCcc
Q 019012 193 QKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH 271 (347)
Q Consensus 193 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 271 (347)
+|+++++ +||+++++|.++..++.+.++++|++++|++|||+|+ ..++++++++.++|+.+.+|..... .....
T Consensus 221 ~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~ 295 (366)
T COG1062 221 EKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEIST 295 (366)
T ss_pred HHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeec
Confidence 9999999 9999999999875358999999999999999999997 6899999999999999999986553 22334
Q ss_pred chHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 272 NLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+...+... .+++|+++++-.. ..++..++++..+|+|... ++..++|+|+++||+.|.+++.. |.||.+
T Consensus 296 ~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 296 RPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred ChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence 45555555 8999998876432 4568999999999999875 55567999999999999999886 766653
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-46 Score=340.55 Aligned_cols=310 Identities=21% Similarity=0.282 Sum_probs=262.8
Q ss_pred cceEEEecccCCCC----CCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 7 NKQVIFRGYIEGAP----KETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 7 ~~a~~~~~~~~g~~----~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
|||+++.++ |.+ .++.+++ .++|.|.|. ++||+|||.+++||++|++.+.|.+. ..+|.++|||++|
T Consensus 1 mka~~~~~~--g~~~~~~~~~~l~~--~~~~~P~~~---~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~GhE~~G 71 (371)
T cd08281 1 MRAAVLRET--GAPTPYADSRPLVI--EEVELDPPG---PGEVLVKIAAAGLCHSDLSVINGDRP--RPLPMALGHEAAG 71 (371)
T ss_pred CcceEEEec--ccccccccCCCceE--EEeecCCCC---CCeEEEEEEEEeeCccchHhhcCCCC--CCCCccCCcccee
Confidence 799999998 653 1345556 457777774 99999999999999999998888542 3468999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|+++++|++||+|++. |+|++|
T Consensus 72 --~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey 149 (371)
T cd08281 72 --VVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEY 149 (371)
T ss_pred --EEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceee
Confidence 999999999999999999852 589999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 189 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~ 189 (347)
+.++++. ++++ |++ ++++ ++.+..+++|||+++...+++++|++|||+|+ |++|++++|+|+..|+ +|++++
T Consensus 150 ~~v~~~~-~~~l-P~~---l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~ 223 (371)
T cd08281 150 AVVSRRS-VVKI-DKD---VPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD 223 (371)
T ss_pred EEecccc-eEEC-CCC---CChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc
Confidence 9999998 9999 999 8875 77788889999999878889999999999985 9999999999999999 799999
Q ss_pred CChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCC
Q 019012 190 GSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQ 268 (347)
Q Consensus 190 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 268 (347)
.+++|++.++ ++|+++++++.+. ++.+++++.+++++|++|||+|. ..+..++++++++|+++.+|..... ..
T Consensus 224 ~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~ 297 (371)
T cd08281 224 LNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----AR 297 (371)
T ss_pred CCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ce
Confidence 9999999998 9999999999876 88888988887789999999986 5889999999999999999975431 11
Q ss_pred CccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEE
Q 019012 269 GIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQV 341 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~v 341 (347)
...+...++.+++++.|+....+.. .+.+.++++++++|++++ .++.+|+|+|+++||+.+.+++..+|+|
T Consensus 298 ~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 298 LSVPALSLVAEERTLKGSYMGSCVP--RRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred eeecHHHHhhcCCEEEEEecCCCCh--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 2345567888999999987654321 456888999999999975 4677889999999999999998876655
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=330.76 Aligned_cols=308 Identities=22% Similarity=0.290 Sum_probs=260.1
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+|||++++++ |.+ +.+ .++|.|.+. ++||+|||.++++|++|++.+.|.+. ..+|.++|||++| +
T Consensus 1 ~mka~~~~~~--~~~----~~~--~~~~~p~~~---~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~G~e~~G--~ 65 (358)
T TIGR03451 1 TVRGVIARSK--GAP----VEL--ETIVVPDPG---PGEVIVDIQACGVCHTDLHYREGGIN--DEFPFLLGHEAAG--V 65 (358)
T ss_pred CcEEEEEccC--CCC----CEE--EEEECCCCC---CCeEEEEEEEEeecHHHHHHhcCCcc--ccCCcccccceEE--E
Confidence 5899999998 655 355 457777664 99999999999999999998887542 3468999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEE-------------------------------------------ecCcceeEEeecccccee
Q 019012 86 SKVVDSDNPNFKPGDLVAG-------------------------------------------LTGWEEYSLIRKTEQLRK 122 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~~~~~~~ 122 (347)
|+++|+++++|++||+|++ .|+|+||+.++++. +++
T Consensus 66 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~ 144 (358)
T TIGR03451 66 VEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQ-CTK 144 (358)
T ss_pred EEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhh-eEE
Confidence 9999999999999999975 27899999999998 999
Q ss_pred cCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH
Q 019012 123 IQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN 200 (347)
Q Consensus 123 i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~ 200 (347)
+ |++ ++++ ++.+++.+++||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++
T Consensus 145 i-p~~---~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~- 218 (358)
T TIGR03451 145 V-DPA---ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR- 218 (358)
T ss_pred C-CCC---CChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-
Confidence 9 998 7775 77888889999999877788999999999985 9999999999999999 5999999999999998
Q ss_pred HcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhh
Q 019012 201 KLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT 278 (347)
Q Consensus 201 ~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 278 (347)
++|+++++++++. ++.+.+++.+++ ++|++|||+|+ ..++.++++++++|+++.+|..... .....+...++.
T Consensus 219 ~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~ 293 (358)
T TIGR03451 219 EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFG 293 (358)
T ss_pred HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhh
Confidence 9999999998876 788889888887 89999999996 5889999999999999999975431 112344557788
Q ss_pred cceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 279 KRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
+++++.+++..... ..+.++++++++++|.+++ .++.+|+++|+++|++.+.+++.. |++|.
T Consensus 294 ~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 294 RGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred cCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 88999887543221 1566889999999999976 467888999999999999888765 77664
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=326.75 Aligned_cols=302 Identities=24% Similarity=0.290 Sum_probs=254.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + .+.+ .++|.|.+. ++||+|||.++++|++|++.+.+.+.....+|.++|||++| +|
T Consensus 1 mka~~~~~~--~-----~l~~--~~~~~p~~~---~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G--~V 66 (339)
T cd08239 1 MRGAVFPGD--R-----TVEL--REFPVPVPG---PGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAG--VV 66 (339)
T ss_pred CeEEEEecC--C-----ceEE--EecCCCCCC---CCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceE--EE
Confidence 689998764 2 3455 457777764 99999999999999999988877543223458999999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+++|+++++|++||+|+.+ |+|++|+.++++. ++++ |++ ++++
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~-~~~~-P~~---~~~~~ 141 (339)
T cd08239 67 VAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKT-LIPL-PDD---LSFAD 141 (339)
T ss_pred EEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHH-eEEC-CCC---CCHHH
Confidence 9999999999999999852 7899999999998 9999 999 7875
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
+++++++++|||+++ ...++++|++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++.
T Consensus 142 aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~ 218 (339)
T cd08239 142 GALLLCGIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD 218 (339)
T ss_pred hhhhcchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc
Confidence 778889999999999 5578899999999986 99999999999999997 999999999999998 9999999999876
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+ .+.+++.+++ ++|++|||+|+. .+..++++++++|+++.+|..... . ......++.+++++.|++...
T Consensus 219 -~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~--~~~~~~~~~~~~~i~g~~~~~- 289 (339)
T cd08239 219 -D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL----T--IEVSNDLIRKQRTLIGSWYFS- 289 (339)
T ss_pred -h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc----c--cCcHHHHHhCCCEEEEEecCC-
Confidence 6 6778787777 899999999985 568899999999999999975431 1 112345677899999887654
Q ss_pred cchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 292 LHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.++++++++.+|.+++ .++.+|+++++++|++.+.+++ .||+||++
T Consensus 290 ----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 290 ----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred ----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 567899999999999875 5677789999999999998875 58999874
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-44 Score=322.62 Aligned_cols=314 Identities=23% Similarity=0.311 Sum_probs=260.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ |.|. ..-.+...++|.|.+. ++||+||+.++++|+.|+..+.|.+.....+|.++|||++| +|
T Consensus 1 m~a~~~~~~--~~~~-~~~~~~~~~~~~p~~~---~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G--~V 72 (324)
T cd08291 1 MKALLLEEY--GKPL-EVKELSLPEPEVPEPG---PGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSG--TV 72 (324)
T ss_pred CeEEEEeec--CCCc-cccEEEecccCCCCCC---CCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEE--EE
Confidence 689999987 6551 0013445568888774 99999999999999999998888653334468999999888 99
Q ss_pred EEeccCCCC-CCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCE
Q 019012 87 KVVDSDNPN-FKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEY 160 (347)
Q Consensus 87 ~~vg~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~ 160 (347)
+++|+++++ |++||+|+++ |+|++|+.++++. ++++ |++ ++++ +++++..++|||.++ ..... ++++
T Consensus 73 ~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~-~~~i-P~~---~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~ 145 (324)
T cd08291 73 VAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQ-CLPL-PDG---VSFEQGASSFVNPLTALGML-ETARE-EGAK 145 (324)
T ss_pred EEECCCccccCCCCCEEEecCCCCCcchheeeecHHH-eEEC-CCC---CCHHHHhhhcccHHHHHHHH-Hhhcc-CCCc
Confidence 999999996 9999999986 8999999999998 9999 999 7875 677888899998654 55555 5666
Q ss_pred EEEE-cCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh
Q 019012 161 VFVS-AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE 238 (347)
Q Consensus 161 vLI~-Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~ 238 (347)
++|+ ||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++.. ++.+.+++.+.+ ++|++||++|+.
T Consensus 146 vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~ 223 (324)
T cd08291 146 AVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGG 223 (324)
T ss_pred EEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcH
Confidence 6665 78899999999999999999999999999999999 8999999999876 888889988877 899999999998
Q ss_pred hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeeec
Q 019012 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
.....+++++++|+++.+|...... ....+...++.+++++.++....+ .....+.+++++++++ +.+++.+..
T Consensus 224 ~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 298 (324)
T cd08291 224 LTGQILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFAS 298 (324)
T ss_pred HHHHHHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccceee
Confidence 8888999999999999998754421 112334566788999988876543 1223567888999988 999999999
Q ss_pred ccccccHHHHHHHhhcCcccceEEE
Q 019012 318 NEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
+|+|+|+++|++.+.+++..||++|
T Consensus 299 ~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 299 RYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred EEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 9999999999999999888899887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=322.35 Aligned_cols=329 Identities=35% Similarity=0.603 Sum_probs=254.9
Q ss_pred cceEEEeccc--CCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCC--CCCCCCCCCCCCceec
Q 019012 7 NKQVIFRGYI--EGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF--TSSYIPPFVPGQPVEG 82 (347)
Q Consensus 7 ~~a~~~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~--~~~~~~p~i~G~e~~G 82 (347)
.|.+++.... .|.+.+..+++. +.|.|+|.+ ++||||||.|+|||+.|+....... .....+|.++|||++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~--~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G 78 (345)
T cd08293 3 NKRVVLNSRPGKNGNPVAENFRVE--ECTLPDELN--EGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGG 78 (345)
T ss_pred ceEEEEecccCCCCCCCccceEEE--eccCCCCCC--CCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeE
Confidence 4677777765 456666666664 477776545 8999999999999999964433211 0113457899999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe-cCcceeEEeeccccceecCCCCCCC--hhhhhhhcCChhhhHHHHHHhhcCCCCC-
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL-TGWEEYSLIRKTEQLRKIQPDHHIP--LSYHIGLLGMPGFTAYAGFHEVCSPKSG- 158 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~i~p~~~~~--~~~~~a~l~~~~~ta~~al~~~~~~~~~- 158 (347)
+|+++|+++++|++||+|+++ ++|++|++++++. ++++ |++-.+ +++.+++++.+++|||+++.+.+++++|
T Consensus 79 --~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~-~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~ 154 (345)
T cd08293 79 --VGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGA 154 (345)
T ss_pred --EEEEeccCCCCCCCCCEEEecCCCceeEEEecHHH-eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999998 5899999999998 9999 986100 1223567888999999999887888877
Q ss_pred -CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 159 -EYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 159 -~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++|||+||+|++|++++|+|+++|+ +|+++++++++.+.+++++|+++++++++. ++.+.+++++++++|++||++|
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g 233 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVG 233 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCC
Confidence 9999999999999999999999999 899999999999998834999999999876 8888898887668999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCC-Ccc--chHH-HhhcceEeeccccccccchhHHHHHHHHHHHHCCcee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQ-GIH--NLFT-LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~ 312 (347)
+..+..++++++++|+++.+|........... ... .... ...+++++..+.....+....+.++++++++.+|.++
T Consensus 234 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~ 313 (345)
T cd08293 234 GEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLK 313 (345)
T ss_pred cHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcc
Confidence 98889999999999999999854321000000 011 1111 2234444443332222333456788899999999999
Q ss_pred eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 313 YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 313 ~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.....++++++++|++.+.+++..||+|+++
T Consensus 314 ~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 314 VKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 87666779999999999999998889999874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=328.18 Aligned_cols=312 Identities=20% Similarity=0.270 Sum_probs=256.8
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
+.+|||+++.++ +++ +.++ ++|.|.+. ++||+|||.++|||++|++.+.|.+.....+|.++|||++|
T Consensus 8 ~~~mka~~~~~~--~~~----~~~~--e~~~P~~~---~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G- 75 (381)
T PLN02740 8 VITCKAAVAWGP--GEP----LVME--EIRVDPPQ---KMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAG- 75 (381)
T ss_pred ceeeEEEEEecC--CCC----cEEE--EeeCCCCC---CCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceE-
Confidence 467999999886 533 3454 57777664 99999999999999999999888653333568999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEE------------------------------------------------------ecCcc
Q 019012 84 GVSKVVDSDNPNFKPGDLVAG------------------------------------------------------LTGWE 109 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~------------------------------------------------------~g~~~ 109 (347)
+|+++|+++++|++||+|++ .|+|+
T Consensus 76 -~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~a 154 (381)
T PLN02740 76 -IVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFT 154 (381)
T ss_pred -EEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccce
Confidence 99999999999999999985 27899
Q ss_pred eeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEE
Q 019012 110 EYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVG 187 (347)
Q Consensus 110 ~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~ 187 (347)
||+.++++. ++++ |++ ++++ +|.+++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++
T Consensus 155 ey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~ 228 (381)
T PLN02740 155 EYTVLDSAC-VVKI-DPN---APLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIG 228 (381)
T ss_pred eEEEEehHH-eEEC-CCC---CCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEE
Confidence 999999998 9999 999 7775 77888899999999877789999999999996 9999999999999999 7999
Q ss_pred EECChHhHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccC
Q 019012 188 SAGSSQKVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSY 264 (347)
Q Consensus 188 ~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 264 (347)
+++++++++.++ ++|+++++|+++. .++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|.....
T Consensus 229 ~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~-- 305 (381)
T PLN02740 229 VDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP-- 305 (381)
T ss_pred EcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC--
Confidence 999999999999 9999999988753 147778888876689999999997 6889999999996 999999975431
Q ss_pred CCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEE
Q 019012 265 HDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.........+ .++.++.|+...++.. ...+.++++++.+|.+++ .++.+|+|+|+++|++.+.+++.. |++|
T Consensus 306 --~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~ 379 (381)
T PLN02740 306 --KMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLL 379 (381)
T ss_pred --ceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEE
Confidence 1111222223 3678888876654322 346889999999998865 467788999999999999887764 8887
Q ss_pred E
Q 019012 343 R 343 (347)
Q Consensus 343 ~ 343 (347)
.
T Consensus 380 ~ 380 (381)
T PLN02740 380 H 380 (381)
T ss_pred e
Confidence 5
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=319.71 Aligned_cols=318 Identities=42% Similarity=0.738 Sum_probs=258.6
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+||+|++.++-.|.+.+..+++ .+.|.|.|. ++||+|||.+++||+.|...... ....|.++|+|++| +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~p~~~---~~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~G--~ 70 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFEL--VEEELPPLK---DGEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVAK--V 70 (329)
T ss_pred CceEEEEecCCCCCCCccceEE--EecCCCCCC---CCcEEEEEEEEecCHHHhccccc----CCCCCcEecceEEE--E
Confidence 6899999994223332345555 457778775 99999999999999988653221 12358899999888 7
Q ss_pred EEEeccCCCCCCCCCEEEEecCcceeEEeecc---ccceecCCCCCCChh------hhhhhcCChhhhHHHHHHhhcCCC
Q 019012 86 SKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKT---EQLRKIQPDHHIPLS------YHIGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~i~p~~~~~~~------~~~a~l~~~~~ta~~al~~~~~~~ 156 (347)
|++ .+++|++||+|+++++|++|+.++++ . ++++ |++ ++ ...++++.+++|||+++.+.++++
T Consensus 71 V~~---~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-P~~---~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~ 142 (329)
T cd08294 71 IES---KNSKFPVGTIVVASFGWRTHTVSDGKDQPD-LYKL-PAD---LPDDLPPSLALGVLGMPGLTAYFGLLEICKPK 142 (329)
T ss_pred Eec---CCCCCCCCCEEEeeCCeeeEEEECCccccc-eEEC-Ccc---ccccCChHHHHHhcccHHHHHHHHHHHhcCCC
Confidence 764 45689999999999999999999998 8 9999 998 65 234578999999999998889999
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++. ++.+.+++.+++++|++||++|
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCC
Confidence 9999999999999999999999999999999999999999999 8999999999876 8888888887668999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCC-CccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQ-GIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVE 315 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~ 315 (347)
++.+..++++++++|+++.+|........... .......+..+++++.++....+.....+.++++++++++|.+++.+
T Consensus 221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 300 (329)
T cd08294 221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE 300 (329)
T ss_pred HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 99999999999999999999864332110000 12234466778888887655433233456788999999999999877
Q ss_pred ecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 316 DMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 316 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
..+++++++++|++.+.+++..||+|+++
T Consensus 301 ~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 301 HVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 77789999999999999998889999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-44 Score=323.85 Aligned_cols=302 Identities=20% Similarity=0.220 Sum_probs=247.5
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCce
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPV 80 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~ 80 (347)
|...+|++++.++ + +++++ +.|.| + + ++||||||.++|||++|++.+.+...+ ...+|.++|||+
T Consensus 1 ~~~~~~~~~~~~~--~-----~~~~~--~~~~p-~-~--~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~ 67 (343)
T PRK09880 1 MQVKTQSCVVAGK--K-----DVAVT--EQEIE-W-N--NNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEV 67 (343)
T ss_pred CcccceEEEEecC--C-----ceEEE--ecCCC-C-C--CCeEEEEEEEEEECccccHhhccCCcccccccCCcccCccc
Confidence 4567899999875 3 34554 46655 4 4 999999999999999999877532211 235689999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEE-----------------------------------ecCcceeEEeeccccceecCC
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAG-----------------------------------LTGWEEYSLIRKTEQLRKIQP 125 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~i~p 125 (347)
+| +|+++ ++++|++||+|+. .|+|+||++++++. ++++ |
T Consensus 68 ~G--~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~~-P 141 (343)
T PRK09880 68 IG--KIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQ-CIPY-P 141 (343)
T ss_pred EE--EEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHH-eEEC-C
Confidence 88 99999 7889999999974 27899999999998 9999 9
Q ss_pred CCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC
Q 019012 126 DHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 126 ~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~ 204 (347)
++ ++++.+++..++++||+++.+ ....+|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+
T Consensus 142 ~~---l~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa 215 (343)
T PRK09880 142 EK---ADEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGA 215 (343)
T ss_pred CC---CCHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCC
Confidence 99 887777788899999999954 56678999999996 9999999999999999 7999999999999999 9999
Q ss_pred CeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEe
Q 019012 205 DEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283 (347)
Q Consensus 205 ~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
++++|+++. ++.+.. +. .+++|++|||+|+ ..++.++++++++|+++.+|.... ....+...++.+++++
T Consensus 216 ~~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i 286 (343)
T PRK09880 216 DKLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISL 286 (343)
T ss_pred cEEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEE
Confidence 999998875 544322 22 2369999999997 578999999999999999997432 1234566778899999
Q ss_pred eccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 284 KGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.++... .+.++++++++++|.+++ .+..+|+++|+++|++.+.+++..+|++|.+
T Consensus 287 ~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 287 KGSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 887542 345889999999999986 4667889999999999999887778999864
|
|
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-44 Score=299.16 Aligned_cols=311 Identities=23% Similarity=0.277 Sum_probs=263.1
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
..++||.+..++ ++| +.+++ +..+.|+ .+||+||+.|+++||+|...+.|.. ....+|.|+|||.+|
T Consensus 5 vI~CKAAV~w~a--~~P----L~IEe--i~V~pPk---a~EVRIKI~~t~vCHTD~~~~~g~~-~~~~fP~IlGHEaaG- 71 (375)
T KOG0022|consen 5 VITCKAAVAWEA--GKP----LVIEE--IEVAPPK---AHEVRIKILATGVCHTDAYVWSGKD-PEGLFPVILGHEAAG- 71 (375)
T ss_pred ceEEeEeeeccC--CCC----eeEEE--EEeCCCC---CceEEEEEEEEeeccccceeecCCC-ccccCceEeccccee-
Confidence 457899999998 877 46655 5555465 9999999999999999999999975 456679999999666
Q ss_pred eEEEEeccCCCCCCCCCEEEEe----------------------------------------------------cCccee
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL----------------------------------------------------TGWEEY 111 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~ 111 (347)
+|+.+|++|+++++||+|... .+|+||
T Consensus 72 -IVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEY 150 (375)
T KOG0022|consen 72 -IVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEY 150 (375)
T ss_pred -EEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeE
Confidence 999999999999999999832 289999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 189 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~ 189 (347)
.+++... +.+| +++ .+++ .+.|.+...|+|-|..+.+++++|+++.|+| .|++|++++|-||+.|| +++.++
T Consensus 151 TVv~~~~-v~kI-d~~---aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvD 224 (375)
T KOG0022|consen 151 TVVDDIS-VAKI-DPS---APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVD 224 (375)
T ss_pred EEeecce-eEec-CCC---CChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEe
Confidence 9999998 9999 666 4554 8899999999999999999999999999999 59999999999999999 999999
Q ss_pred CChHhHHHHHHHcCCCeeeecCCHH-HHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCC
Q 019012 190 GSSQKVDLLKNKLGFDEAFNYNDET-DLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHD 266 (347)
Q Consensus 190 ~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (347)
.+++|++.++ ++|+++.+|+++-. ...+.|++.|++++|+-|||+|+ +.+++++.+..++ |+-+.+|.....
T Consensus 225 iN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~---- 299 (375)
T KOG0022|consen 225 INPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG---- 299 (375)
T ss_pred cCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----
Confidence 9999999999 99999999988321 47889999999999999999997 6899999999998 999999986542
Q ss_pred CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 267 PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.......+.++ ++.++.|+.++.+.. ...+..+.+...+++++.. ++..+||+++++||+.|.+++.. |.|+.
T Consensus 300 ~~i~~~p~~l~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 300 QEISTRPFQLV-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred cccccchhhhc-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 22333444444 478888888877644 6678888888888887765 55566999999999999999887 77765
|
|
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=322.59 Aligned_cols=308 Identities=21% Similarity=0.281 Sum_probs=256.2
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
.|||+++.++ ++ .+.+ .++|.|.+. ++||+|||.+++||++|++.+.+. ..+|.++|||++| +
T Consensus 12 ~mka~~~~~~--~~----~~~~--~e~~~P~~~---~~eVlVkv~~~gic~sD~~~~~g~----~~~p~i~GhE~~G--~ 74 (378)
T PLN02827 12 TCRAAVAWGA--GE----ALVM--EEVEVSPPQ---PLEIRIKVVSTSLCRSDLSAWESQ----ALFPRIFGHEASG--I 74 (378)
T ss_pred eeEEEEEecC--CC----CceE--EEeecCCCC---CCEEEEEEEEEecChhHHHHhcCC----CCCCeeecccceE--E
Confidence 5899999875 32 2444 457777774 999999999999999999887763 2458999999887 9
Q ss_pred EEEeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeEEe
Q 019012 86 SKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYSLI 114 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v 114 (347)
|+++|+++++|++||+|++. |+|+||+.+
T Consensus 75 V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v 154 (378)
T PLN02827 75 VESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVV 154 (378)
T ss_pred EEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEe
Confidence 99999999999999999863 689999999
Q ss_pred eccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 115 RKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 115 ~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
+++. ++++ |++ ++++ ++.+...+.++|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++
T Consensus 155 ~~~~-~~~i-P~~---l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~ 228 (378)
T PLN02827 155 HSGC-AVKV-DPL---APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINP 228 (378)
T ss_pred chhh-eEEC-CCC---CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCH
Confidence 9998 9999 999 7775 67778888999998877788999999999985 9999999999999999 588888899
Q ss_pred HhHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcC-CeEEEEcccccccCCCCCC
Q 019012 193 QKVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDH-GRIAVCGMVSLHSYHDPQG 269 (347)
Q Consensus 193 ~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~ 269 (347)
++.+.++ ++|+++++++++. +++.+.+++++++++|++||++|.. .+..++++++++ |+++.+|.+... ..
T Consensus 229 ~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-----~~ 302 (378)
T PLN02827 229 EKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-----PE 302 (378)
T ss_pred HHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-----cc
Confidence 9999998 9999999988751 2677788888766899999999974 789999999998 999999975431 11
Q ss_pred ccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 270 IHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
......++.+++++.|+....+.. ...++++++++++|.+++ .++.+|+|+++++|++.+.+++. .|+||.+.
T Consensus 303 ~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 303 VSAHYGLFLSGRTLKGSLFGGWKP--KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred ccccHHHHhcCceEEeeecCCCch--hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 112235677899999887654321 446888999999999998 67788899999999999998876 59999764
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-43 Score=320.43 Aligned_cols=303 Identities=18% Similarity=0.215 Sum_probs=245.8
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
.||++.+... +.+. .+. ..++|.|.+. ++||+|||.+++||++|++.+.|.+. ...+|.++|||++| +
T Consensus 10 ~~~~~~~~~~--~~~~--~l~--~~~~~~p~~~---~~eVlV~v~~~gic~sD~~~~~g~~~-~~~~p~i~GhE~~G--~ 77 (360)
T PLN02586 10 PQKAFGWAAR--DPSG--VLS--PFHFSRRENG---DEDVTVKILYCGVCHSDLHTIKNEWG-FTRYPIVPGHEIVG--I 77 (360)
T ss_pred hhheeEEEec--CCCC--Cce--EEeecCCCCC---CCeEEEEEEEecCChhhHhhhcCCcC-CCCCCccCCcceeE--E
Confidence 3555555544 3332 233 4557778664 99999999999999999998877542 23568999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEE--------------------------------------ecCcceeEEeeccccceecCCCC
Q 019012 86 SKVVDSDNPNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLRKIQPDH 127 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~ 127 (347)
|+++|+++++|++||+|+. .|+|+||+.++++. ++++ |++
T Consensus 78 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~ 155 (360)
T PLN02586 78 VTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF-VLRF-PDN 155 (360)
T ss_pred EEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH-eeeC-CCC
Confidence 9999999999999999973 27899999999998 9999 999
Q ss_pred CCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHH-HHHHHcCCC
Q 019012 128 HIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD-LLKNKLGFD 205 (347)
Q Consensus 128 ~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~-~~~~~~g~~ 205 (347)
++++ +|.++..+.|||+++.....+++|++|||.|+ |++|++++|+|+.+|++|++++.++++.. .++ ++|++
T Consensus 156 ---ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~ 230 (360)
T PLN02586 156 ---LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGAD 230 (360)
T ss_pred ---CCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCc
Confidence 8885 78899999999999966666789999999885 99999999999999999988887766544 445 89999
Q ss_pred eeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEee
Q 019012 206 EAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284 (347)
Q Consensus 206 ~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
+++++++. + .+++.++ ++|++||++|. ..++.++++++++|+++.+|.... ....+...++.++..+.
T Consensus 231 ~vi~~~~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~ 299 (360)
T PLN02586 231 SFLVSTDP-E---KMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVG 299 (360)
T ss_pred EEEcCCCH-H---HHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEE
Confidence 99987653 2 4555554 69999999997 478999999999999999986432 12344556677788888
Q ss_pred ccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
++.... .+.++++++++++|++++.+. +|+|+|+++||+.+.+++..||+||++
T Consensus 300 g~~~~~-----~~~~~~~~~li~~g~i~~~~~-~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 300 GSDIGG-----IKETQEMLDFCAKHNITADIE-LIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EcCcCC-----HHHHHHHHHHHHhCCCCCcEE-EEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 876654 456899999999999998764 689999999999999998889999986
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=319.09 Aligned_cols=304 Identities=20% Similarity=0.219 Sum_probs=249.2
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
-+.||+.+... +.+. . +...+++.|.| + ++||+|||.+++||++|++.+.|.+. ...+|.++|||++|
T Consensus 3 ~~~~a~~~~~~--~~~~--~--l~~~~~~~p~~-~--~~eVlVkV~a~gic~sD~~~~~G~~~-~~~~p~i~GhE~aG-- 70 (375)
T PLN02178 3 DQNKAFGWAAN--DESG--V--LSPFHFSRREN-G--ENDVTVKILFCGVCHSDLHTIKNHWG-FSRYPIIPGHEIVG-- 70 (375)
T ss_pred ccceeEEEEEc--cCCC--C--ceEEeecCCCC-C--CCeEEEEEEEEcCchHHHHHhcCCCC-CCCCCcccCceeeE--
Confidence 35667776665 5443 2 34445777766 4 99999999999999999998887542 23458999999888
Q ss_pred EEEEeccCCCCCCCCCEEEE--------------------------------------ecCcceeEEeeccccceecCCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLRKIQPD 126 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~ 126 (347)
+|+++|+++++|++||+|+. .|+|+||+.++++. ++++ |+
T Consensus 71 ~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~ 148 (375)
T PLN02178 71 IATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF-VLSI-PD 148 (375)
T ss_pred EEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH-eEEC-CC
Confidence 99999999999999999973 27899999999998 9999 99
Q ss_pred CCCChhhh-hhhcCChhhhHHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHHHcC
Q 019012 127 HHIPLSYH-IGLLGMPGFTAYAGFHEVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKNKLG 203 (347)
Q Consensus 127 ~~~~~~~~-~a~l~~~~~ta~~al~~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~~~g 203 (347)
+ ++++ ++.++..+.|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++ ++|
T Consensus 149 ~---ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lG 223 (375)
T PLN02178 149 G---LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLG 223 (375)
T ss_pred C---CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCC
Confidence 9 8875 77888899999999855432 368999999986 999999999999999999998877554 67777 999
Q ss_pred CCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceE
Q 019012 204 FDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRIT 282 (347)
Q Consensus 204 ~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
+++++++++. +.+++.++ ++|++|||+|.. .+..++++++++|+++.+|.... ....+...++.++++
T Consensus 224 a~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~ 292 (375)
T PLN02178 224 ADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKM 292 (375)
T ss_pred CcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeE
Confidence 9999987652 24555553 699999999975 78999999999999999987532 123455677789999
Q ss_pred eeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 283 MKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.|+.... .+.+.++++++++|++++.+ .+|+|+|+++|++.+.+++..||+||++
T Consensus 293 i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 293 VGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred EEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 99887655 45689999999999999877 4689999999999999998889999987
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=318.05 Aligned_cols=309 Identities=21% Similarity=0.275 Sum_probs=249.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++... +. .+++ .++|.|.+. ++||+|||.+++||++|++.+.|.+. ....|.++|||++| +|
T Consensus 2 ~~a~~~~~~--~~----~l~~--~~~~~P~~~---~~eVlI~v~a~gi~~sD~~~~~g~~~-~~~~p~i~GhE~~G--~V 67 (368)
T TIGR02818 2 SRAAVAWAA--GQ----PLKI--EEVDVEMPQ---KGEVLVRIVATGVCHTDAFTLSGADP-EGVFPVILGHEGAG--IV 67 (368)
T ss_pred ceEEEEecC--CC----CeEE--EEecCCCCC---CCeEEEEEEEecccHHHHHHhcCCCC-CCCCCeeeccccEE--EE
Confidence 788888886 43 2455 457778774 99999999999999999998887642 23468999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeEEee
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYSLIR 115 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~ 115 (347)
+++|+++++|++||+|++. |+|+||+.+|
T Consensus 68 ~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~ 147 (368)
T TIGR02818 68 EAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVP 147 (368)
T ss_pred EEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEec
Confidence 9999999999999999752 5899999999
Q ss_pred ccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChH
Q 019012 116 KTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQ 193 (347)
Q Consensus 116 ~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~ 193 (347)
+++ ++++ |++ ++++ +|.++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.+++
T Consensus 148 ~~~-~~~l-P~~---l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~ 221 (368)
T TIGR02818 148 EIS-LAKI-NPA---APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPA 221 (368)
T ss_pred hhh-eEEC-CCC---CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 998 9999 999 8885 77888899999999977889999999999985 9999999999999999 8999999999
Q ss_pred hHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCCCCCc
Q 019012 194 KVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHDPQGI 270 (347)
Q Consensus 194 ~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~ 270 (347)
+++.++ ++|+++++|+++. .++.+.+++++++++|++|||+|+ ..+..++++++++ |+++.+|.+... ....
T Consensus 222 ~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~ 296 (368)
T TIGR02818 222 KFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEIS 296 (368)
T ss_pred HHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----Cccc
Confidence 999998 9999999987641 156777888877789999999996 5789999999886 999999975321 1111
Q ss_pred cchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 271 HNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.....+.. +..+.++...... ....+.++++++++|.+++ .++.+|+|+|+++|++.+.+++. .|++|++
T Consensus 297 ~~~~~~~~-~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 297 TRPFQLVT-GRVWRGSAFGGVK--GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred ccHHHHhc-cceEEEeeccCCC--cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 22222332 3345555433211 1456889999999998864 47788899999999999988765 5888864
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=312.21 Aligned_cols=317 Identities=40% Similarity=0.668 Sum_probs=254.3
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
|.|++.+...+.+.+..+++.+ .|.|.|. ++||||||.|+++|+.|+... + .....|.++|+|++| +|+
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~--~~~p~~~---~~evlv~v~a~~~n~~~~~g~---~-~~~~~~~i~G~~~~g--~v~ 70 (325)
T TIGR02825 2 KTWTLKKHFVGYPTDSDFELKT--VELPPLN---NGEVLLEALFLSVDPYMRVAA---K-RLKEGDTMMGQQVAR--VVE 70 (325)
T ss_pred cEEEEecCCCCCCCCCceEEEe--ccCCCCC---CCcEEEEEEEEecCHHHhccc---C-cCCCCCcEecceEEE--EEE
Confidence 6688888777777777776654 7778775 999999999999999765432 2 122347899999888 898
Q ss_pred EeccCCCCCCCCCEEEEecCcceeEEeeccccceecC---CCCCCChhhh-h-hhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 88 VVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ---PDHHIPLSYH-I-GLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~---p~~~~~~~~~-~-a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
++|+ .|++||+|+++++|++|+.++.+. +.++. |++ ++++ + ++++.+++|||+++.+.+++++|++||
T Consensus 71 ~~~~---~~~~GdrV~~~~~~~~~~~~~~~~-~~~l~~~~p~~---~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VL 143 (325)
T TIGR02825 71 SKNV---ALPKGTIVLASPGWTSHSISDGKD-LEKLLTEWPDT---LPLSLALGTVGMPGLTAYFGLLEICGVKGGETVM 143 (325)
T ss_pred eCCC---CCCCCCEEEEecCceeeEEechhh-eEEccccccCC---CCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEE
Confidence 8764 599999999999999999999876 55541 666 6664 4 579999999999998889999999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~ 242 (347)
|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++.+++.+.++..+++++|++||++|++.+..
T Consensus 144 I~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~ 222 (325)
T TIGR02825 144 VNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNT 222 (325)
T ss_pred EeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHH
Confidence 9999999999999999999999999999999999998 999999999876315666666666558999999999988899
Q ss_pred HHHhhhcCCeEEEEcccccccCCCCCC-ccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeeecccc
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHDPQG-IHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVEDMNEG 320 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~~~~ 320 (347)
++++++++|+++.+|............ ......+..+++++.++....+ +....+.++++++++++|.+++.+..+++
T Consensus 223 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~ 302 (325)
T TIGR02825 223 VIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEG 302 (325)
T ss_pred HHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceecccc
Confidence 999999999999998654311000111 1234456667888877654332 22335678999999999999988878889
Q ss_pred cccHHHHHHHhhcCcccceEEEE
Q 019012 321 LENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 321 l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
++++.+|++.+.+++..||+|+.
T Consensus 303 l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 303 FENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHHHhcCCCCCeEEeC
Confidence 99999999999999888999873
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=316.84 Aligned_cols=308 Identities=20% Similarity=0.256 Sum_probs=253.3
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+|||+++.++ +++ +++ +++|.|.+. ++||+|||.+++||++|++.+.|.+. ...+|.++|||++| +
T Consensus 2 ~~ka~~~~~~--~~~----~~l--~~~~~p~~~---~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G--~ 67 (369)
T cd08301 2 TCKAAVAWEA--GKP----LVI--EEVEVAPPQ---AMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAG--I 67 (369)
T ss_pred ccEEEEEecC--CCC----cEE--EEeeCCCCC---CCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccce--E
Confidence 6899999886 433 455 457777664 99999999999999999988887542 34568999999887 9
Q ss_pred EEEeccCCCCCCCCCEEEEe----------------------------------------------------cCcceeEE
Q 019012 86 SKVVDSDNPNFKPGDLVAGL----------------------------------------------------TGWEEYSL 113 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~~~ 113 (347)
|+++|+++++|++||+|+++ |+|+||+.
T Consensus 68 V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~ 147 (369)
T cd08301 68 VESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTV 147 (369)
T ss_pred EEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEE
Confidence 99999999999999999863 67999999
Q ss_pred eeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC
Q 019012 114 IRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 191 (347)
Q Consensus 114 v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~ 191 (347)
+++.+ ++++ |++ ++++ ++.+++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus 148 v~~~~-~~~i-P~~---~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~ 221 (369)
T cd08301 148 VHVGC-VAKI-NPE---APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLN 221 (369)
T ss_pred Eeccc-EEEC-CCC---CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 99998 9999 999 7775 77888889999999888889999999999985 9999999999999999 89999999
Q ss_pred hHhHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCCCC
Q 019012 192 SQKVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHDPQ 268 (347)
Q Consensus 192 ~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~ 268 (347)
+++.++++ ++|++.++++++. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|..... ..
T Consensus 222 ~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~ 296 (369)
T cd08301 222 PSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AV 296 (369)
T ss_pred HHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cc
Confidence 99999998 9999989987752 157777888777689999999986 4788999999996 999999976431 11
Q ss_pred CccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEE
Q 019012 269 GIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.......+ .+++++.|+....+. ..+.++++++++.+|.++. .+..+|+|+|+++|++.+.+++.. |++|
T Consensus 297 ~~~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 297 FSTHPMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred cccCHHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 12222333 368899887665432 1356889999999998765 367778999999999999988764 7776
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=310.95 Aligned_cols=295 Identities=18% Similarity=0.141 Sum_probs=244.8
Q ss_pred eEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEE
Q 019012 9 QVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKV 88 (347)
Q Consensus 9 a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~ 88 (347)
|+.+.++ |.+....++++ ++|.|.|. ++||+|||.+++||++|++.+.|.+. ...+|.++|||++| +|++
T Consensus 1 ~~~~~~~--g~~~~~~l~~~--~~p~P~~~---~~evlVkv~~~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G--~V~~ 70 (329)
T TIGR02822 1 AWEVERP--GPIEDGPLRFV--ERPVPRPG---PGELLVRVRACGVCRTDLHVSEGDLP-VHRPRVTPGHEVVG--EVAG 70 (329)
T ss_pred CeeeecC--CcCCCCCceEE--eCCCCCCC---CCeEEEEEEEEeecchhHHHHcCCCC-CCCCCccCCcceEE--EEEE
Confidence 3566666 66543455554 57888774 99999999999999999998888642 22357999999888 9999
Q ss_pred eccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-hh
Q 019012 89 VDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IG 136 (347)
Q Consensus 89 vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a 136 (347)
+|+++++|++||+|+. .|+|++|+.+|+++ ++++ |++ ++++ ++
T Consensus 71 vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~---~~~~~aa 145 (329)
T TIGR02822 71 RGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF-AYRL-PTG---YDDVELA 145 (329)
T ss_pred ECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEecccc-EEEC-CCC---CCHHHhH
Confidence 9999999999999973 27899999999998 9999 999 7775 77
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHH
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDL 216 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 216 (347)
.+++.+.|||+++. .+++++|++|||+|+ |++|++++|+|+..|++|++++++++|++.++ ++|+++++++.+. .
T Consensus 146 ~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~- 220 (329)
T TIGR02822 146 PLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-P- 220 (329)
T ss_pred HHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-C-
Confidence 89999999999994 588999999999997 99999999999999999999999999999999 9999999876432 1
Q ss_pred HHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchh
Q 019012 217 VAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLY 295 (347)
Q Consensus 217 ~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.+++|+++++.+. ..+..++++++++|+++.+|..... ....+...++.+++++.++....
T Consensus 221 --------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~----- 282 (329)
T TIGR02822 221 --------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT----- 282 (329)
T ss_pred --------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC-----
Confidence 1258999988874 6889999999999999999974321 12344556677888888876543
Q ss_pred HHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 296 PRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 296 ~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.+.+.++++++++|.+++ ++.+|+|+|+++|++.+.+++..||+||
T Consensus 283 ~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 456788999999999985 4677899999999999999999999887
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=286.94 Aligned_cols=322 Identities=22% Similarity=0.303 Sum_probs=265.3
Q ss_pred ccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCcee
Q 019012 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVE 81 (347)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~ 81 (347)
.|+...|+++|+.+ |+|. +.+.+.. ++.|... .++|+||.+|+.|||+|+..++|.|.-....|.+-|.|
T Consensus 15 q~~~~~kalvY~~h--gdP~-kVlql~~--~~~p~~~---~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnE-- 84 (354)
T KOG0025|consen 15 QMPARSKALVYSEH--GDPA-KVLQLKN--LELPAVP---GSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNE-- 84 (354)
T ss_pred ccccccceeeeccc--CCch-hhheeec--ccCCCCC---CCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCc--
Confidence 35566799999999 8884 5555655 5555554 66799999999999999999999998777889999999
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~ 156 (347)
|+|.|+.||+++++|++||.|.-. |+|++|.+..++. ++++ ++. ++.+ ||++..+.+|||..|.+..++.
T Consensus 85 Gv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~-Li~v-d~~---~pl~~AAT~~VNP~TAyrmL~dfv~L~ 159 (354)
T KOG0025|consen 85 GVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESD-LIKV-DKD---IPLASAATLSVNPCTAYRMLKDFVQLN 159 (354)
T ss_pred ceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccc-eEEc-CCc---CChhhhheeccCchHHHHHHHHHHhcC
Confidence 666999999999999999999865 8999999999998 9999 888 5664 9999999999999999999999
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHH-CCC-CccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRC-FPQ-GIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~-~~g-~~d~v 231 (347)
+|++|+-.||++++|++++|+|+++|++-+-+.++....+.+++ ++|+++||...+- ........ ... .+.+.
T Consensus 160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel--~~~~~~k~~~~~~~prLa 237 (354)
T KOG0025|consen 160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL--RDRKMKKFKGDNPRPRLA 237 (354)
T ss_pred CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh--cchhhhhhhccCCCceEE
Confidence 99999999999999999999999999987777777655554432 6899999854321 11122222 223 78999
Q ss_pred EeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc------cchhHHHHHHHHHH
Q 019012 232 FDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY------LHLYPRFLDYVISN 305 (347)
Q Consensus 232 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 305 (347)
|||+|+....+..+.|.+||.++++|..+.. ........++++++.++|+++..+ ++...+.+.+++++
T Consensus 238 lNcVGGksa~~iar~L~~GgtmvTYGGMSkq-----Pv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l 312 (354)
T KOG0025|consen 238 LNCVGGKSATEIARYLERGGTMVTYGGMSKQ-----PVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDL 312 (354)
T ss_pred EeccCchhHHHHHHHHhcCceEEEecCccCC-----CcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHH
Confidence 9999999989999999999999999987653 345667789999999999998777 34445678999999
Q ss_pred HHCCceeeeeecccccccHHHHHHHhhcCc-ccceEEEEec
Q 019012 306 YKQGKIVYVEDMNEGLENAPAAFVGLFSGK-NVGKQVVRVA 345 (347)
Q Consensus 306 l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~~ 345 (347)
+..|+|..+..+..+|++...|++.....- ..+|.+|.+.
T Consensus 313 ~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 313 YRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred HHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 999999999988889999999888655433 3457777653
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-42 Score=314.79 Aligned_cols=309 Identities=24% Similarity=0.317 Sum_probs=250.2
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+|||+++... +.+ +.++ ++|.|.+. ++||+|||.+++||++|.+.+.|.+. ...+|.++|||++| +
T Consensus 2 ~~~a~~~~~~--~~~----~~~~--~~~~P~~~---~~eVlIrv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G--~ 67 (368)
T cd08300 2 TCKAAVAWEA--GKP----LSIE--EVEVAPPK---AGEVRIKILATGVCHTDAYTLSGADP-EGLFPVILGHEGAG--I 67 (368)
T ss_pred cceEEEEecC--CCC----cEEE--EeecCCCC---CCEEEEEEEEEEechhhHHHhcCCCc-cCCCCceeccceeE--E
Confidence 5889988876 433 4554 57777774 99999999999999999998887542 23568999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeEEe
Q 019012 86 SKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYSLI 114 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v 114 (347)
|+++|+++++|++||+|++. |+|+||+.+
T Consensus 68 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v 147 (368)
T cd08300 68 VESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVV 147 (368)
T ss_pred EEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEE
Confidence 99999999999999999863 479999999
Q ss_pred eccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 115 RKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 115 ~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
+++. ++++ |++ ++++ ++.++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++
T Consensus 148 ~~~~-~~~i-P~~---l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~ 221 (368)
T cd08300 148 AEIS-VAKI-NPE---APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINP 221 (368)
T ss_pred chhc-eEeC-CCC---CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence 9998 9999 999 7875 77888899999999877788999999999985 9999999999999999 799999999
Q ss_pred HhHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCCCCC
Q 019012 193 QKVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHDPQG 269 (347)
Q Consensus 193 ~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~ 269 (347)
++.+.++ ++|+++++|+++. +++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|..... ...
T Consensus 222 ~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~ 296 (368)
T cd08300 222 DKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEI 296 (368)
T ss_pred HHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----Ccc
Confidence 9999998 9999999988753 157788888887789999999997 5889999999886 999999975321 011
Q ss_pred ccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 270 IHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
......+. ++.++.++....+. ..+.+.++++++.+|.+++. ++.+|+|+|+++||+.+.+++. .|++|+
T Consensus 297 ~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 297 STRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred ccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 11222222 23455555443322 24668899999999999863 6778899999999999988765 488764
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-42 Score=311.61 Aligned_cols=310 Identities=19% Similarity=0.209 Sum_probs=248.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ + .+++ .++|.|.+++ ++||+|||.++++|++|...+.... ....|.++|||++| +|
T Consensus 1 Mka~~~~~~--~-----~~~~--~~~~~P~~~~--~~evlV~v~~~gi~~~D~~~~~~~~--~~~~p~i~G~e~~G--~V 65 (347)
T PRK10309 1 MKSVVNDTD--G-----IVRV--AESPIPEIKH--QDDVLVKVASSGLCGSDIPRIFKNG--AHYYPITLGHEFSG--YV 65 (347)
T ss_pred CceEEEeCC--C-----ceEE--EECCCCCCCC--CCEEEEEEEEEEEchhcHHHHhCCC--CCCCCcccccceEE--EE
Confidence 689999875 4 2344 5577776644 8999999999999999986432211 12358999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhhhh
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIG 136 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a 136 (347)
+++|+++++|++||+|+++ |+|++|+.++++. ++++ |++ ++++.|
T Consensus 66 ~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~---~s~~~a 140 (347)
T PRK10309 66 EAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKN-LFAL-PTD---MPIEDG 140 (347)
T ss_pred EEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHH-eEEC-cCC---CCHHHh
Confidence 9999999999999999863 7999999999998 9999 999 887644
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
++..++.++++++ +...+++|++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++++++. +
T Consensus 141 a~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~ 216 (347)
T PRK10309 141 AFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S 216 (347)
T ss_pred hhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C
Confidence 4444677788886 5678899999999985 99999999999999995 788999999999998 9999999988764 4
Q ss_pred HHHHHHHHCCC-Ccc-EEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 216 LVAALKRCFPQ-GID-IYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 216 ~~~~i~~~~~g-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
.+.+.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|..... . .........++.+++++.|+......
T Consensus 217 -~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~~~~~~ 292 (347)
T PRK10309 217 -APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSWMNYSS 292 (347)
T ss_pred -HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEeccccC
Confidence 5567777766 888 99999997 5889999999999999999975431 1 11111234567889999987654321
Q ss_pred chhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 293 HLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
....+.++++++++++|.++ +.++.+++|+|+++|++.+.+++..||+|+++
T Consensus 293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred CcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 11245688999999999985 55777889999999999999988889999876
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=305.82 Aligned_cols=314 Identities=21% Similarity=0.295 Sum_probs=263.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.++ ++|. . .+...++|.|.+. ++||+|||.++++|+.|+..+.|.+......|.++|||++| +|
T Consensus 1 m~a~~~~~~--~~~~-~--~~~~~~~~~p~~~---~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G--~V 70 (324)
T cd08292 1 MRAAVHTQF--GDPA-D--VLEIGEVPKPTPG---AGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVG--VV 70 (324)
T ss_pred CeeEEEccC--CChh-H--eEEEeecCCCCCC---CCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEE--EE
Confidence 689999876 6541 1 2444557888664 99999999999999999988877654233458899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+++|+++++|++||+|+++ |+|++|+.+++.. ++++ |++ ++++ ++.++..+++||+++ ..+++++|++||
T Consensus 71 ~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~i-p~~---~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vl 144 (324)
T cd08292 71 DAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADG-LVPL-PDG---ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLI 144 (324)
T ss_pred EEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHH-eEEC-CCC---CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEE
Confidence 9999999999999999985 8999999999988 9999 999 7875 778888899999998 558899999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLD 241 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~ 241 (347)
|+|++|.+|++++|+|+.+|++|++++.++++.+.++ ++|+++++++++. ++.+.+++.+.+ ++|++||++|+....
T Consensus 145 I~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~ 222 (324)
T cd08292 145 QNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAG 222 (324)
T ss_pred EcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHH
Confidence 9999999999999999999999999999999989998 7899889998876 888889998887 999999999998889
Q ss_pred HHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHHHCCceeeeee
Q 019012 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
.++++++++|+++.+|..... .........+.+++++.++....+ +....+.++++++++.+|.+++.+.
T Consensus 223 ~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~ 297 (324)
T cd08292 223 ELLSLLGEGGTLVSFGSMSGE-----PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVE 297 (324)
T ss_pred HHHHhhcCCcEEEEEecCCCC-----CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccc
Confidence 999999999999999875321 122344445678899888766432 2334567899999999999987667
Q ss_pred cccccccHHHHHHHhhcCcccceEEEE
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
..++++++.+|++.+.++...+|++++
T Consensus 298 ~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 298 AVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred cEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 778999999999999887777888763
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=309.54 Aligned_cols=307 Identities=21% Similarity=0.256 Sum_probs=250.6
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+|||+++.+. +++ +.+ +++|.|.+ + ++||+|||.++++|++|++.+.|.+. ...|.++|||++| +
T Consensus 2 ~~ka~~~~~~--~~~----~~~--~~~~~p~~-~--~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G--~ 66 (365)
T cd08277 2 KCKAAVAWEA--GKP----LVI--EEIEVAPP-K--ANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAG--I 66 (365)
T ss_pred ccEEEEEccC--CCC----cEE--EEEECCCC-C--CCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeE--E
Confidence 5789999886 432 355 45777766 4 99999999999999999998887543 3458999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEEe--------------------------------------------------cCcceeEEee
Q 019012 86 SKVVDSDNPNFKPGDLVAGL--------------------------------------------------TGWEEYSLIR 115 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------g~~~~~~~v~ 115 (347)
|+++|++++++++||+|++. |+|+||+.++
T Consensus 67 V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~ 146 (365)
T cd08277 67 VESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVD 146 (365)
T ss_pred EEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEc
Confidence 99999999999999999863 6899999999
Q ss_pred ccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChH
Q 019012 116 KTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQ 193 (347)
Q Consensus 116 ~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~ 193 (347)
++. ++++ |++ ++++ ++.++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++
T Consensus 147 ~~~-~~~l-P~~---l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~ 220 (365)
T cd08277 147 ENY-VAKI-DPA---APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINED 220 (365)
T ss_pred hhh-eEEC-CCC---CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 998 9999 999 8875 77888899999999878889999999999985 9999999999999999 7999999999
Q ss_pred hHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCCCCCc
Q 019012 194 KVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHDPQGI 270 (347)
Q Consensus 194 ~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~ 270 (347)
+.+.++ ++|+++++++++. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...+.. ..
T Consensus 221 ~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-----~~ 294 (365)
T cd08277 221 KFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE-----LS 294 (365)
T ss_pred HHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccc-----cc
Confidence 999998 9999999987652 145677887776789999999995 6788999999885 9999999754311 12
Q ss_pred cchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 271 HNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.....+.. ++++.|+....+.. ...+++++++++++.++ +.++.+|+|+|+++|++.+.+++. .|++++
T Consensus 295 ~~~~~~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 295 IRPFQLIL-GRTWKGSFFGGFKS--RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred cCHhHHhh-CCEEEeeecCCCCh--HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 22333333 77888776654321 34678999999998765 457778899999999999988774 587763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=307.03 Aligned_cols=305 Identities=19% Similarity=0.201 Sum_probs=252.2
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
..++|+++..+ +++ +.+ .++|.|.+. ++||+|||.+++||++|++.+.|.+. ....|.++|||++|
T Consensus 8 ~~~~~~~~~~~--~~~----~~~--~~~~~p~~~---~~eVlVrv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~E~~G-- 73 (357)
T PLN02514 8 KKTTGWAARDP--SGH----LSP--YTYTLRKTG---PEDVVIKVIYCGICHTDLHQIKNDLG-MSNYPMVPGHEVVG-- 73 (357)
T ss_pred ceEEEEEEecC--CCC----ceE--EeecCCCCC---CCcEEEEEEEeccChHHHHhhcCCcC-cCCCCccCCceeeE--
Confidence 34789998887 533 344 457777664 99999999999999999998877542 23458999999888
Q ss_pred EEEEeccCCCCCCCCCEEEE--------------------------------------ecCcceeEEeeccccceecCCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLRKIQPD 126 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~ 126 (347)
+|+++|+++++|++||+|+. .|+|++|+.++++. ++++ |+
T Consensus 74 ~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~ 151 (357)
T PLN02514 74 EVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF-VVKI-PE 151 (357)
T ss_pred EEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH-eEEC-CC
Confidence 99999999999999999973 27899999999988 9999 99
Q ss_pred CCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC
Q 019012 127 HHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD 205 (347)
Q Consensus 127 ~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~ 205 (347)
+ ++++ +++++..+.|||+++......++|++++|+| +|++|++++|+|+..|++|++++.++++.+.+.+++|++
T Consensus 152 ~---~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~ 227 (357)
T PLN02514 152 G---MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGAD 227 (357)
T ss_pred C---CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCc
Confidence 9 7875 7889999999999997666668999999997 599999999999999999999988887776665479998
Q ss_pred eeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEee
Q 019012 206 EAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284 (347)
Q Consensus 206 ~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
.++++.+. ..+++.+. ++|++|||+|. ..++.++++++++|+++.+|..... .......++.+++++.
T Consensus 228 ~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~ 296 (357)
T PLN02514 228 DYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP------LQFVTPMLMLGRKVIT 296 (357)
T ss_pred EEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC------CcccHHHHhhCCcEEE
Confidence 88776542 23455443 69999999996 5889999999999999999975321 2344566778899999
Q ss_pred ccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
|+.... .+.++++++++.+|.+++.+. +|+|+|+.+||+.+.+++..+|++|.++.
T Consensus 297 g~~~~~-----~~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 297 GSFIGS-----MKETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred EEecCC-----HHHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 987755 456899999999999987764 68999999999999999888999998764
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=311.13 Aligned_cols=309 Identities=18% Similarity=0.221 Sum_probs=238.8
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCC------CCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCc
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPK------GSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQP 79 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~------~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e 79 (347)
-|||+++.++ + +++++ ++|.|.|. + ++||||||.++|||++|++.+.|.+ ...+|.++|||
T Consensus 2 ~mka~v~~~~--~-----~~~~~--e~~~P~~~~~~~~~~--~~eVlVkv~a~gIcgsD~~~~~g~~--~~~~p~i~GhE 68 (393)
T TIGR02819 2 GNRGVVYLGP--G-----KVEVQ--DIDYPKLELPDGRKC--EHGVILKVVTTNICGSDQHMVRGRT--TAPTGLVLGHE 68 (393)
T ss_pred CceEEEEecC--C-----ceeEE--eccCCcccCCCccCC--CCeEEEEEEEeeecHHHHHHHCCCC--CCCCCccccce
Confidence 4899999876 4 34554 46666552 2 5899999999999999999888754 23468999999
Q ss_pred eecceEEEEeccCCCCCCCCCEEEE----------------------------------------ecCcceeEEeecc--
Q 019012 80 VEGFGVSKVVDSDNPNFKPGDLVAG----------------------------------------LTGWEEYSLIRKT-- 117 (347)
Q Consensus 80 ~~G~g~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~-- 117 (347)
++| +|+++|++|++|++||||+. .|+|+||+.+|+.
T Consensus 69 ~~G--~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~ 146 (393)
T TIGR02819 69 ITG--EVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADF 146 (393)
T ss_pred eEE--EEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhC
Confidence 888 99999999999999999954 1788999999964
Q ss_pred ccceecCCCCCCChhh-----hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECC
Q 019012 118 EQLRKIQPDHHIPLSY-----HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGS 191 (347)
Q Consensus 118 ~~~~~i~p~~~~~~~~-----~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~ 191 (347)
+ ++++ |++ ++. .++++..++++||+++ ...++++|++|||.| +|++|++++|+|+.+|++ |++++.+
T Consensus 147 ~-l~~v-P~~---~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~ 219 (393)
T TIGR02819 147 N-LLKF-PDR---DQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLN 219 (393)
T ss_pred c-eEEC-CCc---ccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCC
Confidence 5 9999 987 432 3578888999999998 458899999999976 599999999999999996 4555667
Q ss_pred hHhHHHHHHHcCCCeeeecC-CHHHHHHHHHHHCCC-CccEEEeCCChh---------------hHHHHHHhhhcCCeEE
Q 019012 192 SQKVDLLKNKLGFDEAFNYN-DETDLVAALKRCFPQ-GIDIYFDNVGGE---------------MLDAALLNMRDHGRIA 254 (347)
Q Consensus 192 ~~~~~~~~~~~g~~~vi~~~-~~~~~~~~i~~~~~g-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v 254 (347)
++|.+.++ ++|++. +++. +. ++.+.+++.+++ ++|++||++|.. .+++++++++++|+++
T Consensus 220 ~~r~~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~ 296 (393)
T TIGR02819 220 PARLAQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIG 296 (393)
T ss_pred HHHHHHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEE
Confidence 88999999 999974 5543 33 567778888876 899999999974 7999999999999999
Q ss_pred EEccccc-ccCCC------CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--ee-cccccccH
Q 019012 255 VCGMVSL-HSYHD------PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--ED-MNEGLENA 324 (347)
Q Consensus 255 ~~g~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~-~~~~l~~~ 324 (347)
.+|.+.. ..... ....+.....+.+++++.+..... .+++.++++++.+|++++. +. .+++|+|+
T Consensus 297 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~ 371 (393)
T TIGR02819 297 IPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDA 371 (393)
T ss_pred EeeecCCcccccccccccccccccchHHhhccCceEEeccCCh-----hhhHHHHHHHHHcCCCCHHHceecceecHHHH
Confidence 9998632 11000 011122344455666666532211 3445789999999998763 44 57899999
Q ss_pred HHHHHHhhcCcccceEEEEec
Q 019012 325 PAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 325 ~~a~~~~~~~~~~gk~vv~~~ 345 (347)
++||+.+.+++. .|++|+++
T Consensus 372 ~~a~~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 372 PEGYAEFDAGAA-KKFVIDPH 391 (393)
T ss_pred HHHHHHHhhCCc-eEEEEeCC
Confidence 999999988754 79999874
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=279.20 Aligned_cols=340 Identities=65% Similarity=1.137 Sum_probs=301.4
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
..+|+|++..+..|-|...++.+...++.++.+.+ +++||||.+|-+..|.-+.+++.......-+|+.||..+.|.|
T Consensus 2 v~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~--s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~G 79 (343)
T KOG1196|consen 2 VTNKQVILKNYVTGFPTESDFEFTTTTVELRVPLG--SGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFG 79 (343)
T ss_pred ccccEEEEeccCCCCCccccceeeeeeecccCCCC--CccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCc
Confidence 45799999998888888889998888877777777 9999999999999999887776655444667999999999998
Q ss_pred EEEEeccCCCCCCCCCEEEEecCcceeEEeeccc-cceecCCC-CCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 85 VSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTE-QLRKIQPD-HHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~i~p~-~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+...+.++-+++++||.|+++-+|.+|.+++... ..+++ +. ...|+++-..++.++++|||-++.+....++|++|+
T Consensus 80 V~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki-~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~ 158 (343)
T KOG1196|consen 80 VAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKI-QHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVF 158 (343)
T ss_pred eEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccC-CCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEE
Confidence 8888888889999999999999999999997653 24455 33 225677778999999999999999999999999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~ 242 (347)
|.||+|++|+.+.|+|+.+|++|+..+.+++|.+.++.++|.+.++||+++.+....+++..+.++|+.||.+|+..++.
T Consensus 159 VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDa 238 (343)
T KOG1196|consen 159 VSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDA 238 (343)
T ss_pred EeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHH
Confidence 99999999999999999999999999999999999998899999999998657888899888889999999999999999
Q ss_pred HHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccc
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLE 322 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~ 322 (347)
.+..|+..||++.+|.-+..+...+..-.+....+.+++.+.|+....+.+.+.+.++.+..++++|+|+...+..-+|+
T Consensus 239 vl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Gle 318 (343)
T KOG1196|consen 239 VLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLE 318 (343)
T ss_pred HHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHh
Confidence 99999999999999988776655555556678899999999998888888888999999999999999999988877999
Q ss_pred cHHHHHHHhhcCcccceEEEEecCC
Q 019012 323 NAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 323 ~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
..++||.-|.+++..||.++.+..|
T Consensus 319 n~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 319 NGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred ccHHHHHHHhccCcccceEEEeecC
Confidence 9999999999999999999998764
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=306.84 Aligned_cols=289 Identities=18% Similarity=0.201 Sum_probs=240.9
Q ss_pred eecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEE-----
Q 019012 30 SGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG----- 104 (347)
Q Consensus 30 ~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~----- 104 (347)
+++|.|.+. ++||+|||.++++|++|++.+.+.+.....+|.++|||++| +|+++|++++.+ +||+|+.
T Consensus 14 ~~~p~P~~~---~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G--~V~~vG~~v~~~-~GdrV~~~~~~~ 87 (349)
T TIGR03201 14 TRVEIPELG---AGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISG--RVIQAGAGAASW-IGKAVIVPAVIP 87 (349)
T ss_pred EeccCCCCC---CCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceE--EEEEeCCCcCCC-CCCEEEECCCCC
Confidence 457888764 99999999999999999987644332223558999999888 999999999887 9999986
Q ss_pred -------------------------ecCcceeEEeeccccceecCCC------CCCChhhh-hhhcCChhhhHHHHHHhh
Q 019012 105 -------------------------LTGWEEYSLIRKTEQLRKIQPD------HHIPLSYH-IGLLGMPGFTAYAGFHEV 152 (347)
Q Consensus 105 -------------------------~g~~~~~~~v~~~~~~~~i~p~------~~~~~~~~-~a~l~~~~~ta~~al~~~ 152 (347)
.|+|++|+.++++. ++++ |+ + ++++ +++++.++.++|+++. .
T Consensus 88 cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~-~~~i-p~~~~~~~~---~~~~~~a~~~~~~~ta~~a~~-~ 161 (349)
T TIGR03201 88 CGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKG-LCVV-DEARLAAAG---LPLEHVSVVADAVTTPYQAAV-Q 161 (349)
T ss_pred CCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHH-eEEC-CcccccccC---CCHHHhhhhcchHHHHHHHHH-h
Confidence 27999999999998 9999 98 6 6665 7788899999999995 4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCH--HHHHHHHHHHCCC-Ccc
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE--TDLVAALKRCFPQ-GID 229 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~g-~~d 229 (347)
.++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++++.+. +++.+.+++.+++ ++|
T Consensus 162 ~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d 239 (349)
T TIGR03201 162 AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLR 239 (349)
T ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCC
Confidence 78999999999998 99999999999999999999999999999998 9999989987653 2567778888876 776
Q ss_pred ----EEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHH
Q 019012 230 ----IYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304 (347)
Q Consensus 230 ----~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (347)
++|||+|+. .+..++++++++|+++.+|..... ...+...++.++.++.|.+... .+.++++++
T Consensus 240 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~ 308 (349)
T TIGR03201 240 STGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGCP-----PDRYPAALD 308 (349)
T ss_pred CCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecCC-----HHHHHHHHH
Confidence 899999974 677899999999999999976431 1334456667778888876543 456899999
Q ss_pred HHHCCceeee-eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 305 NYKQGKIVYV-EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 305 ~l~~g~i~~~-~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
++++|.+++. +...++|+++++||+.+.+++..+|++++
T Consensus 309 ~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 309 LVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred HHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 9999999763 23467999999999999999888898885
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=311.00 Aligned_cols=310 Identities=18% Similarity=0.163 Sum_probs=245.0
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhccccc-ccCCCCC-----CCCCCCCCCc
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM-RSSFTSS-----YIPPFVPGQP 79 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~-~~~~~~~-----~~~p~i~G~e 79 (347)
.||++++.++ + ++.+ .++|.|.+. ++||+|||.++|||++|++.+ .|.+... ...|.++|||
T Consensus 2 ~~~a~~~~~~--~-----~l~~--~e~p~P~~~---~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE 69 (410)
T cd08238 2 KTKAWRMYGK--G-----DLRL--EKFELPEIA---DDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE 69 (410)
T ss_pred CcEEEEEEcC--C-----ceEE--EecCCCCCC---CCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence 4789888775 3 3444 558888764 999999999999999999876 3432111 1358899999
Q ss_pred eecceEEEEeccCCC-CCCCCCEEEEe-------------------cCcceeEEeecc----ccceecCCCCCCChhhhh
Q 019012 80 VEGFGVSKVVDSDNP-NFKPGDLVAGL-------------------TGWEEYSLIRKT----EQLRKIQPDHHIPLSYHI 135 (347)
Q Consensus 80 ~~G~g~v~~vg~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~i~p~~~~~~~~~~ 135 (347)
++| +|+++|++++ +|++||||++. |+|+||+.++++ . ++++ |++ ++++.
T Consensus 70 ~~G--~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~-~~~l-P~~---l~~~~ 142 (410)
T cd08238 70 FAG--TILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQD-CLLI-YEG---DGYAE 142 (410)
T ss_pred cEE--EEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCC-eEEC-CCC---CCHHH
Confidence 888 9999999998 69999999873 899999999987 5 8999 999 88765
Q ss_pred hhcCChhhh---HHHHH--------HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEECChHhHHHHHHH
Q 019012 136 GLLGMPGFT---AYAGF--------HEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC---YVVGSAGSSQKVDLLKNK 201 (347)
Q Consensus 136 a~l~~~~~t---a~~al--------~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~---~V~~~~~~~~~~~~~~~~ 201 (347)
|++..++++ +++++ .+.+++++|++|+|+|++|++|++++|+|+..|+ +|++++.+++|++.++ +
T Consensus 143 aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~ 221 (410)
T cd08238 143 ASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-R 221 (410)
T ss_pred HhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-H
Confidence 555434332 33332 2457789999999999889999999999999864 8999999999999999 7
Q ss_pred c--------CCC-eeeecCC-HHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCC
Q 019012 202 L--------GFD-EAFNYND-ETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQG 269 (347)
Q Consensus 202 ~--------g~~-~vi~~~~-~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 269 (347)
+ |++ .++++++ . ++.+.+++++++ ++|++||++|. ..+..++++++++|+++.++...... ...
T Consensus 222 ~~~~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~---~~~ 297 (410)
T cd08238 222 LFPPEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKN---FSA 297 (410)
T ss_pred hccccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCC---ccc
Confidence 6 665 5677754 3 677888888887 89999999985 68899999999999887765422110 012
Q ss_pred ccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 270 IHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
.++...++.+++++.|+.... .+.++++++++++|++++ .++.+|+|+|+++|++.+. ++..||+||.++
T Consensus 298 ~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 298 PLNFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred cccHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 345567888999999977644 567899999999999988 5777889999999999998 677789999763
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=304.48 Aligned_cols=292 Identities=16% Similarity=0.133 Sum_probs=228.2
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCC---CCCCCCCCCceec
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSS---YIPPFVPGQPVEG 82 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~---~~~p~i~G~e~~G 82 (347)
.+++++++++ + ++++ ++.|.| + + ++||+|||.++|||++|++.+.|.+.+. ...|.++|||++|
T Consensus 2 ~~~~~~~~~~--~-----~~~~--~~~~~P-~-~--~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G 68 (341)
T cd08237 2 INQVYRLVRP--K-----FFEV--TYEEEN-L-R--EDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIG 68 (341)
T ss_pred cccceEEecc--c-----eEEE--eecCCC-C-C--CCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEE
Confidence 3577888775 3 3455 457777 4 5 9999999999999999999998865321 2469999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------cCcceeEEeeccccceecCCCCCCChhhhh
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHI 135 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~ 135 (347)
+|+++|.+ +|++||||+.. |+|+||+++|+++ ++++ |++ ++++.
T Consensus 69 --~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v-P~~---l~~~~ 139 (341)
T cd08237 69 --VVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDR-LVKL-PDN---VDPEV 139 (341)
T ss_pred --EEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHH-eEEC-CCC---CChHH
Confidence 99988764 79999999752 7899999999998 9999 999 88877
Q ss_pred hhcCChhhhHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 136 GLLGMPGFTAYAGFHEV--CSPKSGEYVFVSAASGAVGQLVGQLAKL-HGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~--~~~~~~~~vLI~Ga~g~~G~~ai~la~~-~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
|++..+++++++++... ..+++|++|||+|+ |++|++++|+|+. .|+ +|++++++++|++.++ +++.+..++
T Consensus 140 aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-- 215 (341)
T cd08237 140 AAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-- 215 (341)
T ss_pred hhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh--
Confidence 77888999999998543 45688999999996 9999999999986 564 8999999999999998 666543221
Q ss_pred CHHHHHHHHHHHCCC-CccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecc
Q 019012 212 DETDLVAALKRCFPQ-GIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
++ ..+ ++|++||++|+ ..+..++++++++|+++.+|.... ....+...++.+++++.|+
T Consensus 216 ---~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~ 279 (341)
T cd08237 216 ---DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGS 279 (341)
T ss_pred ---hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEe
Confidence 11 112 69999999995 368999999999999999997432 1234456778899999988
Q ss_pred ccccccchhHHHHHHHHHHHHCC-----ceeeeeeccccccc---HHHHHHHhhcCcccceEEEEec
Q 019012 287 LQSDYLHLYPRFLDYVISNYKQG-----KIVYVEDMNEGLEN---APAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~g-----~i~~~~~~~~~l~~---~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
.... .+.++++++++.++ .+++.++.+|++++ +.++++.+.++ ..||+||+++
T Consensus 280 ~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 280 SRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred cccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 6543 45688999999998 46667777888864 55555554443 5689999874
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=303.60 Aligned_cols=302 Identities=23% Similarity=0.264 Sum_probs=252.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--C--------CCCCCCCC
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--S--------SYIPPFVP 76 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--~--------~~~~p~i~ 76 (347)
|||+++.++ + .+.++ ++|.|.+ + ++||+||+.++++|+.|+..+.+... + ....|.++
T Consensus 1 mka~~~~~~--~-----~l~~~--~~~~p~~-~--~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 68 (351)
T cd08233 1 MKAARYHGR--K-----DIRVE--EVPEPPV-K--PGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTL 68 (351)
T ss_pred CceEEEecC--C-----ceEEE--eccCCCC-C--CCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCcee
Confidence 689999875 3 34554 5777766 4 99999999999999999876554211 0 12358999
Q ss_pred CCceecceEEEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCC
Q 019012 77 GQPVEGFGVSKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQP 125 (347)
Q Consensus 77 G~e~~G~g~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p 125 (347)
|||++| +|+++|+++++|++||+|++ .|+|++|+.++.+. ++++ |
T Consensus 69 G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-~~~l-P 144 (351)
T cd08233 69 GHEFSG--VVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYH-VHKL-P 144 (351)
T ss_pred cccceE--EEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHH-eEEC-c
Confidence 999887 99999999999999999986 38899999999988 9999 9
Q ss_pred CCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC
Q 019012 126 DHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 126 ~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~ 204 (347)
++ ++++.+++..++.|||+++ ...++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+
T Consensus 145 ~~---~~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga 218 (351)
T cd08233 145 DN---VPLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGA 218 (351)
T ss_pred CC---CCHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCC
Confidence 99 7876444557889999999 7788999999999985 9999999999999999 8999999999999998 8999
Q ss_pred CeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceE
Q 019012 205 DEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRIT 282 (347)
Q Consensus 205 ~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
+.++++++. ++.+.+++.+++ ++|++||++|+ ..++.++++++++|+++.+|.... ....+...+..++++
T Consensus 219 ~~~i~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~ 291 (351)
T cd08233 219 TIVLDPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKT 291 (351)
T ss_pred CEEECCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcE
Confidence 999999886 788889888877 79999999985 688999999999999999997542 123455677888999
Q ss_pred eeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccH-HHHHHHhhcCccc-ceEEE
Q 019012 283 MKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENA-PAAFVGLFSGKNV-GKQVV 342 (347)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~-~~a~~~~~~~~~~-gk~vv 342 (347)
+.+..... .+.++++++++++|.+++ .+..+++++|+ ++|++.+.+++.. +|+||
T Consensus 292 i~g~~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 292 LTGSICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEEEeccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 98876543 467899999999999964 46678899996 7899999998864 89887
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=306.21 Aligned_cols=300 Identities=21% Similarity=0.245 Sum_probs=235.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCC--CCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSS--YIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~--~~~p~i~G~e~~G~g 84 (347)
|||+++.. +++ ++.+ .++|.|.|. ++||||||.|++||++|++.+.|.+... ..+|.++|||++|
T Consensus 1 mka~~~~~---~~~---~l~~--~~~p~p~~~---~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G-- 67 (355)
T cd08230 1 MKAIAVKP---GKP---GVRV--VDIPEPEPT---PGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALG-- 67 (355)
T ss_pred CceeEecC---CCC---CCeE--EeCCCCCCC---CCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccce--
Confidence 58888875 333 2455 457888774 9999999999999999999998864221 2357899999777
Q ss_pred EEEEeccCCCCCCCCCEEEEe---------------------------------cCcceeEEeeccccceecCCCCCCCh
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL---------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPL 131 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~ 131 (347)
+|+++|++ +.|++||+|+.. |+|+||+.++++. ++++ |++ +
T Consensus 68 ~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~-~~~~-P~~---~ 141 (355)
T cd08230 68 VVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEY-LVKV-PPS---L 141 (355)
T ss_pred EEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEecccc-EEEC-CCC---C
Confidence 99999999 999999999752 7799999999998 9999 999 7
Q ss_pred hhhhhhcCChhhhHHHHHHhh------cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---ChHhHHHHHHHc
Q 019012 132 SYHIGLLGMPGFTAYAGFHEV------CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---SSQKVDLLKNKL 202 (347)
Q Consensus 132 ~~~~a~l~~~~~ta~~al~~~------~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---~~~~~~~~~~~~ 202 (347)
+ +++++..++.++++++... .+.++|++|||+|+ |++|++++|+|+..|++|+++++ +++|++.++ ++
T Consensus 142 ~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~ 218 (355)
T cd08230 142 A-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-EL 218 (355)
T ss_pred C-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc
Confidence 7 6677777887776665332 23578999999996 99999999999999999999987 678889998 99
Q ss_pred CCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccc----hHHHh
Q 019012 203 GFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN----LFTLV 277 (347)
Q Consensus 203 g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~ 277 (347)
|++. +++.+. ++.+ .+ ..+++|++|||+|+ ..+..++++++++|+++.+|..... ...... ...++
T Consensus 219 Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~ 289 (355)
T cd08230 219 GATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNRDLV 289 (355)
T ss_pred CCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhhhHh
Confidence 9986 566554 4433 22 22479999999997 4789999999999999999976541 011122 35678
Q ss_pred hcceEeeccccccccchhHHHHHHHHHHHHCCc------eeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 278 TKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK------IVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+++++.|+.... .+.++++++++.++. +++.++.+++++|+++|++.+.++. .|+||++
T Consensus 290 ~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 290 LGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 8999999986544 345777888888766 5566788899999999999887654 4998864
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=296.51 Aligned_cols=289 Identities=17% Similarity=0.220 Sum_probs=226.4
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecC-hhcccccccCCCCC--CCCCCCCCCceec
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCD-PYMRGRMRSSFTSS--YIPPFVPGQPVEG 82 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~-~~D~~~~~~~~~~~--~~~p~i~G~e~~G 82 (347)
++|++++.++ +.+++ .+.|.|.|. ++||+|||.+++|| ++|++.++|.+... ..+|.++|||++|
T Consensus 1 ~~ka~~~~~~-------~~l~~--~e~~~p~~~---~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G 68 (308)
T TIGR01202 1 KTQAIVLSGP-------NQIEL--REVTLTPPS---PGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVG 68 (308)
T ss_pred CceEEEEeCC-------CeEEE--EEecCCCCC---CCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEE
Confidence 4788888764 23455 457777774 99999999999996 69998888765322 2469999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEE------------ecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHH
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAG------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFH 150 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~ 150 (347)
+|+++|+++ .|++||||+. .|+|+||+.+|++. ++++ |++ ++.+++.+ .+++|||+++.
T Consensus 69 --~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~-~~~i-p~~---~~~~~a~~-~~~~~a~~~~~ 139 (308)
T TIGR01202 69 --RVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASR-VCRL-DPA---LGPQGALL-ALAATARHAVA 139 (308)
T ss_pred --EEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHH-ceeC-CCC---CCHHHHhh-hHHHHHHHHHH
Confidence 999999998 5999999985 48999999999998 9999 998 67655444 46799999995
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
+ . ..+++++||+|+ |++|++++|+|+++|++ |++++.++++++.+. .+ .++|+.+ . .++++|
T Consensus 140 ~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~D 202 (308)
T TIGR01202 140 G-A-EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDYR 202 (308)
T ss_pred h-c-ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCCC
Confidence 4 3 346889999985 99999999999999996 556666666666555 33 3455432 1 123799
Q ss_pred EEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHC
Q 019012 230 IYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 230 ~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (347)
++|||+|+. .++.++++++++|+++.+|..... ...+...++.+++++.++.... .+.++++++++++
T Consensus 203 vvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~ 271 (308)
T TIGR01202 203 AIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEP------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIES 271 (308)
T ss_pred EEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCC------cccccchhhhcceEEEEecccc-----hhHHHHHHHHHHc
Confidence 999999985 689999999999999999975321 2334456677888888766543 5679999999999
Q ss_pred Cceee--eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 309 GKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 309 g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
|.+++ .++..|+|+|+++|++.+.++...+|++|+
T Consensus 272 g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 272 GALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred CCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 99986 467788999999999988776666788873
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=295.91 Aligned_cols=308 Identities=25% Similarity=0.258 Sum_probs=243.5
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCC-CCCCceecceE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPF-VPGQPVEGFGV 85 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~-i~G~e~~G~g~ 85 (347)
|+++++... +.. ..+ .+.+.|.+ + |++|+|||.++|||.+|++.+++..... .+|. ++|||++| +
T Consensus 1 m~a~~~~~~--~~~----~~~--~~~~~p~~-~--p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G--~ 66 (350)
T COG1063 1 MKAAVVYVG--GGD----VRL--EEPPPPIP-G--PGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVG--E 66 (350)
T ss_pred CceeEEEec--CCc----ccc--ccCCCCCC-C--CCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceE--E
Confidence 466666664 322 123 34554434 4 9999999999999999999999864322 2233 99999988 9
Q ss_pred EEEeccCCCCCCCCCEEEEe-----------------------------------cCcceeEEeeccccceecCCCCCCC
Q 019012 86 SKVVDSDNPNFKPGDLVAGL-----------------------------------TGWEEYSLIRKTEQLRKIQPDHHIP 130 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~ 130 (347)
|+++| .++.+++||||+.. |+|+||+.+|.++.+.++ |++
T Consensus 67 V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~-pd~--- 141 (350)
T COG1063 67 VVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKL-PDG--- 141 (350)
T ss_pred EEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecC-CCC---
Confidence 99999 77889999999732 589999999987735556 777
Q ss_pred hhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeee
Q 019012 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 131 ~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
++.+.|++..++++++++........++.+|+|+|+ |++|++++++++..|+ +|++++.+++|++++++..|++.+++
T Consensus 142 ~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~ 220 (350)
T COG1063 142 IDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN 220 (350)
T ss_pred CChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeec
Confidence 666799999999999777445555666669999996 9999999999999998 89999999999999993367776666
Q ss_pred cCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 210 YNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 210 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
.... +....+.+.+.| ++|++|||+|. ..+.+++++++++|+++.+|.+.... ...+...++.+++++.|+.
T Consensus 221 ~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~ 294 (350)
T COG1063 221 PSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSL 294 (350)
T ss_pred Cccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEecc
Confidence 6654 677788888888 99999999996 47899999999999999999875531 1456778999999999984
Q ss_pred cccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcc-cceEEEEe
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKN-VGKQVVRV 344 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~ 344 (347)
... ....++.+++++++|++++. ++..+++++++++++.+.+.+. ..|+++++
T Consensus 295 ~~~----~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 295 RPS----GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCC----CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 422 14568999999999999986 3345589999999999987554 44777753
|
|
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=297.39 Aligned_cols=306 Identities=20% Similarity=0.239 Sum_probs=247.8
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
|++++.++ ++ .++++ ++|.|.+. ++||+|||.++++|++|+..+.|.+.. ..+|.++|||++| +|+
T Consensus 2 ka~~~~~~--~~----~l~~~--~~~~p~~~---~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G--~V~ 67 (361)
T cd08231 2 RAAVLTGP--GK----PLEIR--EVPLPDLE---PGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVG--RVV 67 (361)
T ss_pred eEEEEcCC--CC----CCEEE--eccCCCCC---CCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCce--EEE
Confidence 78889887 52 34554 47777664 999999999999999999888875531 4568899999887 999
Q ss_pred EeccCCCC------CCCCCEEEEe-------------------------------------cCcceeEEeecc-ccceec
Q 019012 88 VVDSDNPN------FKPGDLVAGL-------------------------------------TGWEEYSLIRKT-EQLRKI 123 (347)
Q Consensus 88 ~vg~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~~-~~~~~i 123 (347)
++|+++++ |++||+|+++ |+|++|+.++++ . ++++
T Consensus 68 ~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~-~~~l 146 (361)
T cd08231 68 ALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA-IVRV 146 (361)
T ss_pred EeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCc-eEEC
Confidence 99999986 9999999875 789999999986 6 9999
Q ss_pred CCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHH
Q 019012 124 QPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK 201 (347)
Q Consensus 124 ~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~ 201 (347)
|++ ++.+ ++.++++++|||+++......++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++ +
T Consensus 147 -P~~---~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~ 220 (361)
T cd08231 147 -PDN---VPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-E 220 (361)
T ss_pred -CCC---CCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H
Confidence 998 7765 6677799999999997766667999999998 59999999999999999 9999999999999998 9
Q ss_pred cCCCeeeecCCH--HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHh
Q 019012 202 LGFDEAFNYNDE--TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLV 277 (347)
Q Consensus 202 ~g~~~vi~~~~~--~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 277 (347)
+|++.+++++.. .++...+++.+++ ++|++||++|+ ..+..++++++++|+++.+|..... .........++
T Consensus 221 ~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~ 296 (361)
T cd08231 221 FGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIV 296 (361)
T ss_pred cCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHh
Confidence 999988887753 0233578888876 89999999986 5788999999999999999975421 11223344568
Q ss_pred hcceEeeccccccccchhHHHHHHHHHHHHCC--c--eeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 278 TKRITMKGFLQSDYLHLYPRFLDYVISNYKQG--K--IVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~--i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+++++.++...+ .+.++++++++.++ . +.+.+..+++++++++|++.+.+++. +|+||++
T Consensus 297 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 297 RKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred hcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 8899998887644 34467777777776 3 34456777899999999999988774 6998863
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-40 Score=292.31 Aligned_cols=310 Identities=26% Similarity=0.335 Sum_probs=245.8
Q ss_pred EEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCC---CCCCCCCCceecc-eEEEEec-cCCCCCCCCC
Q 019012 26 EIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSY---IPPFVPGQPVEGF-GVSKVVD-SDNPNFKPGD 100 (347)
Q Consensus 26 ~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~---~~p~i~G~e~~G~-g~v~~vg-~~v~~~~~Gd 100 (347)
.+..++.|.|.|+ +++++|++.++++||.|+.++.|.+.... .+|.+++++..|. +.+..+| ..+..+..||
T Consensus 19 ~~~~~~~~iP~~~---~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~ 95 (347)
T KOG1198|consen 19 VLFSEEVPIPEPE---DGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGD 95 (347)
T ss_pred eEEeecccCCCCC---CCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeee
Confidence 4556678999886 99999999999999999999999886666 6787778876665 4555556 3456688888
Q ss_pred EEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhc------CCCCCCEEEEEcCCchH
Q 019012 101 LVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVC------SPKSGEYVFVSAASGAV 170 (347)
Q Consensus 101 ~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~------~~~~~~~vLI~Ga~g~~ 170 (347)
.+... |+|+||+++|+.. ++++ |++ +++. +|+++.++.|||.++.... ++++|++|||+||+|++
T Consensus 96 ~~~~~~~~g~~aey~v~p~~~-~~~~-P~~---l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggV 170 (347)
T KOG1198|consen 96 AVVAFLSSGGLAEYVVVPEKL-LVKI-PES---LSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGV 170 (347)
T ss_pred EEeeccCCCceeeEEEcchhh-ccCC-CCc---cChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHH
Confidence 77776 8999999999888 9999 999 8885 8899999999999999988 89999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcC
Q 019012 171 GQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDH 250 (347)
Q Consensus 171 G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~ 250 (347)
|++++|+|+++|+..++++.++++.++++ ++|+++++||+++ ++.+++++.++++||+||||+|+......+.++..+
T Consensus 171 G~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~ 248 (347)
T KOG1198|consen 171 GTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKG 248 (347)
T ss_pred HHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEEEECCCCCccccchhhhccC
Confidence 99999999999964444444788889999 9999999999998 999999998855999999999998888889999988
Q ss_pred CeEEEEcccccccCCCCCCccch--HHHhhcceEeecccc-ccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHH
Q 019012 251 GRIAVCGMVSLHSYHDPQGIHNL--FTLVTKRITMKGFLQ-SDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAA 327 (347)
Q Consensus 251 G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a 327 (347)
|+...++................ .........+.+... ........+.++.+.++++.|+|++.+..+||++++.+|
T Consensus 249 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea 328 (347)
T KOG1198|consen 249 GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEA 328 (347)
T ss_pred CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHH
Confidence 86555554333211111110111 000111111111111 111333478899999999999999999999999999999
Q ss_pred HHHhhcCcccceEEEEec
Q 019012 328 FVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 328 ~~~~~~~~~~gk~vv~~~ 345 (347)
++.+.++...||+++.++
T Consensus 329 ~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 329 FEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHhhcCCcceEEEEec
Confidence 999999999999999875
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=297.88 Aligned_cols=317 Identities=20% Similarity=0.234 Sum_probs=257.6
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC---------CCCCCC
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT---------SSYIPP 73 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~---------~~~~~p 73 (347)
.|.+|+|+++.....|.+. . .++..++|.|.+ + ++||+||+.+++||++|++.+.+... +...++
T Consensus 9 ~~~~~~a~~~~~~~~g~~~-~--~~~~~~~~~p~l-~--~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~ 82 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPA-Q--AIQLEDVPVPEL-G--PGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPY 82 (393)
T ss_pred CchhhhheeeecccCCCcc-c--ceEEeecCCCCC-C--CCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCc
Confidence 3567999998643225442 2 344555777766 4 99999999999999999987766411 011234
Q ss_pred CCCCCceecceEEEEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeecccccee
Q 019012 74 FVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRK 122 (347)
Q Consensus 74 ~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~ 122 (347)
.++|||++| +|+++|++++.+++||+|+++ |+|++|+.+++.. +++
T Consensus 83 ~~~G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~-l~~ 159 (393)
T cd08246 83 HIGGSDASG--IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQ-LMP 159 (393)
T ss_pred cccccceEE--EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHH-eEE
Confidence 689999888 999999999999999999874 7899999999988 999
Q ss_pred cCCCCCCChhhh-hhhcCChhhhHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 123 IQPDHHIPLSYH-IGLLGMPGFTAYAGFHEV--CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 123 i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~--~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
+ |++ ++++ ++.++..++|||+++... ++++++++|||+|++|++|++++++|+..|++++++++++++.+.++
T Consensus 160 i-P~~---l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~ 235 (393)
T cd08246 160 K-PKH---LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR 235 (393)
T ss_pred C-CCC---CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 9 999 7875 778999999999998654 67899999999999999999999999999999999999999999999
Q ss_pred HHcCCCeeeecCCH---------------------HHHHHHHHHHCCC--CccEEEeCCChhhHHHHHHhhhcCCeEEEE
Q 019012 200 NKLGFDEAFNYNDE---------------------TDLVAALKRCFPQ--GIDIYFDNVGGEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 200 ~~~g~~~vi~~~~~---------------------~~~~~~i~~~~~g--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~ 256 (347)
++|+++++++++. ..+.+.+.+++++ ++|++||++|+..+..++++++++|+++.+
T Consensus 236 -~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~ 314 (393)
T cd08246 236 -ALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVIC 314 (393)
T ss_pred -HcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEE
Confidence 8999988886431 0255677777776 699999999988899999999999999999
Q ss_pred cccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcC-c
Q 019012 257 GMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSG-K 335 (347)
Q Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~-~ 335 (347)
|...... .......+..++.++.+..... .+.+++++++++++.+.+.+..++++++++++++.+.++ +
T Consensus 315 g~~~~~~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~ 384 (393)
T cd08246 315 AGTTGYN-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQH 384 (393)
T ss_pred cccCCCC-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCcc
Confidence 8754321 2234556677788888876554 456888999999999987777788999999999999988 6
Q ss_pred ccceEEEE
Q 019012 336 NVGKQVVR 343 (347)
Q Consensus 336 ~~gk~vv~ 343 (347)
..||+++-
T Consensus 385 ~~gkvvv~ 392 (393)
T cd08246 385 HVGNMAVL 392 (393)
T ss_pred ccceEEEe
Confidence 77888864
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=294.37 Aligned_cols=317 Identities=24% Similarity=0.311 Sum_probs=260.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCC-CcEEEEEEEeecChhcccccccCCCCCCC----CCCCCCCcee
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDS-GAFLVKNLYLSCDPYMRGRMRSSFTSSYI----PPFVPGQPVE 81 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~-~~vlV~v~~~~i~~~D~~~~~~~~~~~~~----~p~i~G~e~~ 81 (347)
|||+++.++ |.+. ..+.+ .++|.|.+. + ++|+||+.++++|+.|+..+.|.+..... .|.++|||++
T Consensus 1 ~~a~~~~~~--~~~~-~~~~~--~~~~~p~~~---~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~ 72 (341)
T cd08290 1 AKALVYTEH--GEPK-EVLQL--ESYEIPPPG---PPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGV 72 (341)
T ss_pred CceEEEccC--CCch-hheEE--eecCCCCCC---CCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceE
Confidence 789999987 6652 33455 457777665 6 99999999999999999888775432222 5779999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~ 156 (347)
| +|+++|+++..|++||+|+++ |+|++|+.++++. ++++ |++ ++++ +++++..++|||+++.....++
T Consensus 73 G--~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~-~~~l-p~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~ 145 (341)
T cd08290 73 G--EVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD-LIKV-PND---VDPEQAATLSVNPCTAYRLLEDFVKLQ 145 (341)
T ss_pred E--EEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHH-eEeC-CCC---CCHHHHHHhhccHHHHHHHHHhhcccC
Confidence 8 999999999999999999986 8999999999988 9999 999 7775 7888999999999998778899
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----HhHHHHHHHcCCCeeeecCCH--HHHHHHHHHHCCCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----QKVDLLKNKLGFDEAFNYNDE--TDLVAALKRCFPQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~~~~~g~~d~ 230 (347)
++++|||+|++|++|++++|+|+..|++|+++++++ ++.+.++ ++|+++++++++. .++.+.++..+++++|+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~ 224 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKL 224 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceE
Confidence 999999999999999999999999999999998876 6678887 8999999887651 04566677666557999
Q ss_pred EEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHH
Q 019012 231 YFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISN 305 (347)
Q Consensus 231 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 305 (347)
+|||+|+......+++++++|+++.+|..... ........++.+++++.+...... +....+.+++++++
T Consensus 225 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (341)
T cd08290 225 ALNCVGGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAEL 299 (341)
T ss_pred EEECcCcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHH
Confidence 99999988888899999999999999864332 112334456788899888765432 33445578999999
Q ss_pred HHCCceeeeeeccc---ccccHHHHHHHhhcCcccceEEEEe
Q 019012 306 YKQGKIVYVEDMNE---GLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 306 l~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.+|.+.+....++ ++++++++++.+.+++..+|+|+.+
T Consensus 300 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 300 IREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 99999988777777 9999999999999888888998863
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=289.02 Aligned_cols=300 Identities=23% Similarity=0.285 Sum_probs=253.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ +. .+.+ .++|.|.+ + ++||+||+.++++|+.|+..+.|.+. ...+|.++|||++| +|
T Consensus 1 m~a~~~~~~--~~----~~~~--~~~~~p~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G--~v 66 (333)
T cd08296 1 YKAVQVTEP--GG----PLEL--VERDVPLP-G--PGEVLIKVEACGVCHSDAFVKEGAMP-GLSYPRVPGHEVVG--RI 66 (333)
T ss_pred CeEEEEccC--CC----CceE--EeccCCCC-C--CCEEEEEEEEEecchHHHHHHhCCCC-CCCCCcccCcceeE--EE
Confidence 689999876 32 2455 45787766 4 99999999999999999988877542 23458899999888 99
Q ss_pred EEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+++|+++++|++||+|++ .|+|++|+.++.+. ++++ |++ ++++
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~-~~~l-p~~---~~~~~ 141 (333)
T cd08296 67 DAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEA-LARI-PDD---LDAAE 141 (333)
T ss_pred EEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhh-eEeC-CCC---CCHHH
Confidence 999999999999999986 27899999999988 9999 999 7875
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
++.++..+.+||+++.. .++.++++|||+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++++.
T Consensus 142 aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~- 217 (333)
T cd08296 142 AAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE- 217 (333)
T ss_pred hhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-
Confidence 77899999999999955 5899999999999 699999999999999999999999999999998 9999999998876
Q ss_pred HHHHHHHHHCCCCccEEEeCCC-hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc
Q 019012 215 DLVAALKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
++.+.+++. +++|++||++| +..+..++++++++|+++.+|.... ....+...++.+++++.++....
T Consensus 218 ~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 218 DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC---
Confidence 677777765 36999999987 5788999999999999999997542 12344566778999999987543
Q ss_pred hhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 294 LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 294 ~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.+.++++++++..+.+++.+ ..++++++.+|++.+.+++..||+||+
T Consensus 287 --~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 --ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred --HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 45688888999999888765 468999999999999999888998874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=287.49 Aligned_cols=319 Identities=25% Similarity=0.316 Sum_probs=262.0
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+|||+++..+ +.+. .+.+. +.+.|.+ . ++|++|||.++++|+.|.....+.+......|.++|||++| +
T Consensus 1 ~m~a~~~~~~--~~~~--~~~~~--~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~ 69 (334)
T PTZ00354 1 MMRAVTLKGF--GGVD--VLKIG--ESPKPAP-K--RNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAG--Y 69 (334)
T ss_pred CcEEEEEEec--CCCc--ceEEE--eCCCCCC-C--CCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEE--E
Confidence 4899999987 6553 34444 3555545 4 99999999999999999888877543333346789999888 9
Q ss_pred EEEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEE
Q 019012 86 SKVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYV 161 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~v 161 (347)
|+++|++++++++||+|+++ |+|++|+.++.++ ++++ |++ ++.+ ++.++.++.+||+++...+.++++++|
T Consensus 70 v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~v 144 (334)
T PTZ00354 70 VEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGH-VMHI-PQG---YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSV 144 (334)
T ss_pred EEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHH-cEeC-CCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 99999999999999999997 7999999999998 9999 999 7774 778899999999999887889999999
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH-HHHHHHHHCCC-CccEEEeCCChhh
Q 019012 162 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD-LVAALKRCFPQ-GIDIYFDNVGGEM 239 (347)
Q Consensus 162 LI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~g-~~d~vid~~g~~~ 239 (347)
||+|++|++|++++++|+..|++++++.+++++.+.++ ++|++.++++... + +...+++.+++ ++|++||+.+++.
T Consensus 145 lI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~ 222 (334)
T PTZ00354 145 LIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSY 222 (334)
T ss_pred EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHH
Confidence 99999999999999999999999888898999999998 8999888988765 4 77888888876 8999999999999
Q ss_pred HHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHHHCCceeee
Q 019012 240 LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIVYV 314 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~~~ 314 (347)
+..++++++++|+++.++..... .....+...+..++.++.++..... +....+.++++++++.++.+.+.
T Consensus 223 ~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (334)
T PTZ00354 223 LSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI 298 (334)
T ss_pred HHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc
Confidence 99999999999999999854332 1111344455666667777654332 12223567888999999999887
Q ss_pred eecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 315 EDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 315 ~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+...+++++++++++.+.+++..+|+|+.+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 299 VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred cccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 77778999999999999988777899997754
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=285.68 Aligned_cols=314 Identities=25% Similarity=0.309 Sum_probs=260.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~g 84 (347)
|||+.++++ +.+. .+.+ .+.+.|.+ . +++|+||+.++++|+.|+..+.|.... ....|.++|||++|
T Consensus 1 ~~a~~~~~~--~~~~--~~~~--~~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G-- 69 (324)
T cd08244 1 MRAIRLHEF--GPPE--VLVP--EDVPDPVP-G--PGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAG-- 69 (324)
T ss_pred CeEEEEcCC--CCcc--ceEE--eccCCCCC-C--CCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEE--
Confidence 689999876 6543 3444 34555544 4 999999999999999999888774421 23447889999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe-----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL-----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSG 158 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~ 158 (347)
+|+++|++++.+++||+|+++ |+|++|+.++.+. ++++ |++ ++++ +++++..++||| ++....+++++
T Consensus 70 ~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~---~~~~~a~~~~~~~~ta~-~~~~~~~~~~~ 143 (324)
T cd08244 70 VVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDS-LHPV-PDG---LDLEAAVAVVHDGRTAL-GLLDLATLTPG 143 (324)
T ss_pred EEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHH-eEeC-CCC---CCHHHHhhhcchHHHHH-HHHHhcCCCCC
Confidence 999999999999999999984 7999999999988 9999 999 7775 778999999995 55577889999
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 237 (347)
+++||+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+++ ++|+++|++|+
T Consensus 144 ~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~ 221 (324)
T cd08244 144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGG 221 (324)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCCh
Confidence 99999999999999999999999999999999999999998 8999888988876 777888888776 89999999999
Q ss_pred hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeee
Q 019012 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
.....++++++++|+++.+|..... . .......++.+++++.+...... +....+.++++++++.++.+.+.+.
T Consensus 222 ~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 296 (324)
T cd08244 222 AIGRAALALLAPGGRFLTYGWASGE----W-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVG 296 (324)
T ss_pred HhHHHHHHHhccCcEEEEEecCCCC----C-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccc
Confidence 8889999999999999999875432 1 12333455688888887765432 2344677888999999999987777
Q ss_pred cccccccHHHHHHHhhcCcccceEEEEe
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
..+++++++++++.+.+++..+|+++++
T Consensus 297 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 297 QTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred eEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 7789999999999999988888998864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=286.66 Aligned_cols=321 Identities=32% Similarity=0.514 Sum_probs=260.7
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
.||||++.++ +.-.+..+.+ ++.+.|.+. +++++|||.++++|+.|+....|.+.....+|.++|||++| +
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~---~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G--~ 71 (329)
T cd08250 1 SFRKLVVHRL--SPNFREATSI--VDVPVPLPG---PGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVG--E 71 (329)
T ss_pred CceEEEeccC--CCCcccCceE--EecCCCCCC---CCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEE--E
Confidence 4899999998 5522223445 457777664 99999999999999999988877654335578899999888 9
Q ss_pred EEEeccCCCCCCCCCEEEEe--cCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEE
Q 019012 86 SKVVDSDNPNFKPGDLVAGL--TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFV 163 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI 163 (347)
|+.+|++++.+++||+|+++ |+|++|+.++.+. ++++ |++ .+ ++++++..+.+||+++.+..++++++++||
T Consensus 72 v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~-~~~i-p~~---~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI 145 (329)
T cd08250 72 VVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARH-AVPV-PEL---KP-EVLPLLVSGLTASIALEEVGEMKSGETVLV 145 (329)
T ss_pred EEEECCCCCCCCCCCEEEEecCcceeEEEEechHH-eEEC-CCC---cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 99999999999999999986 8999999999998 9999 987 43 577899999999999988788999999999
Q ss_pred EcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHHH
Q 019012 164 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAA 243 (347)
Q Consensus 164 ~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~ 243 (347)
+|++|++|++++++|+..|++|+++++++++.+.++ ++|++.+++.++. ++.+.+.+..++++|++||++|+..+..+
T Consensus 146 ~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~ 223 (329)
T cd08250 146 TAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTC 223 (329)
T ss_pred EeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHH
Confidence 999999999999999999999999999999999998 8999888888775 67777776655589999999999889999
Q ss_pred HHhhhcCCeEEEEcccccccCCCC----CCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeee--ec
Q 019012 244 LLNMRDHGRIAVCGMVSLHSYHDP----QGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVE--DM 317 (347)
Q Consensus 244 ~~~l~~~G~~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~--~~ 317 (347)
+++++++|+++.+|.......... .........+.+++++.++....+.....+.++++++++.++.+++.+ ..
T Consensus 224 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 303 (329)
T cd08250 224 VDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTR 303 (329)
T ss_pred HHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcc
Confidence 999999999999987543210000 001112345677888888765443333466788999999999998753 34
Q ss_pred ccccccHHHHHHHhhcCcccceEEEE
Q 019012 318 NEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.++++++++|++.+.+++..+|++++
T Consensus 304 ~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 304 FRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 47999999999999988877888763
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=289.10 Aligned_cols=307 Identities=22% Similarity=0.277 Sum_probs=250.9
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC-------------------
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT------------------- 67 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~------------------- 67 (347)
||++++..+ +.+. .+.+.+ +.+.|.+ . +++|+|||.++++|++|+....|.+.
T Consensus 1 ~~a~~~~~~--~~~~--~~~~~~-~~~~~~~-~--~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 72 (350)
T cd08274 1 MRAVLLTGH--GGLD--KLVYRD-DVPVPTP-A--PGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWG 72 (350)
T ss_pred CeEEEEecc--CCcc--ceeecc-cCCCCCC-C--CCeEEEEEEeccCCHHHHHHhcCCCCCcccccccccccccccccc
Confidence 688888876 6543 334432 3455655 4 99999999999999999988776432
Q ss_pred CCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe----------------------cCcceeEEeeccccceecCC
Q 019012 68 SSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL----------------------TGWEEYSLIRKTEQLRKIQP 125 (347)
Q Consensus 68 ~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~i~p 125 (347)
.....|.++|||++| +|+++|+++++|++||+|++. |+|++|+.++.+. ++++ |
T Consensus 73 ~~~~~p~~~G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p 148 (350)
T cd08274 73 GTLSFPRIQGADIVG--RVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAEN-AYPV-N 148 (350)
T ss_pred CCCCCCcccCCcceE--EEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHH-ceeC-C
Confidence 124458999999888 999999999999999999882 7999999999988 9999 9
Q ss_pred CCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 126 DHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 126 ~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
++ +++. ++++++.+.|||+++ ...++++|+++||+|++|++|++++++|+.+|++|+++++++ +.+.++ ++|+
T Consensus 149 ~~---~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~ 222 (350)
T cd08274 149 SP---LSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGA 222 (350)
T ss_pred CC---CCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCC
Confidence 99 7775 789999999999998 778899999999999999999999999999999999998765 788888 8998
Q ss_pred CeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEe
Q 019012 205 DEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283 (347)
Q Consensus 205 ~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
+.+++.... ...+ ...+.+ ++|++||++|++.+..++++++++|+++.+|.... .....+...++.+++++
T Consensus 223 ~~~~~~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~ 294 (350)
T cd08274 223 DTVILRDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTL 294 (350)
T ss_pred eEEEeCCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEE
Confidence 766665443 3333 445555 89999999999889999999999999999986422 11234455667888888
Q ss_pred eccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 284 KGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.++.... .+.++++++++.++.+++.+...+++++++++++.+.+++..+|+|+++
T Consensus 295 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 295 FGSTLGT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred EEeecCC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 8877643 6678999999999999887777889999999999999888888988863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=292.31 Aligned_cols=317 Identities=20% Similarity=0.234 Sum_probs=257.7
Q ss_pred cccccceEEEec--ccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC---------CCC
Q 019012 3 EQVENKQVIFRG--YIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS---------SYI 71 (347)
Q Consensus 3 ~~~~~~a~~~~~--~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~---------~~~ 71 (347)
++.+|||+++.. + |+|. .++.+ .++|.|.+. +++++||+.++++|+.|.+...+.... ...
T Consensus 4 ~~~~~~a~~~~~~~~--~~~~-~~~~~--~~~~~p~l~---~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~ 75 (398)
T TIGR01751 4 VPETMYAFAIREERD--GDPR-QAIQL--EVVPVPELG---PGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDD 75 (398)
T ss_pred cchhhhheEEecccC--CCcc-cceEE--eecCCCCCC---CCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCC
Confidence 456799999976 5 6552 34555 557878764 999999999999999998765553210 012
Q ss_pred CC-CCCCCceecceEEEEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeecccc
Q 019012 72 PP-FVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQ 119 (347)
Q Consensus 72 ~p-~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~ 119 (347)
.| .++|||++| +|+++|++++.|++||+|++. |+|++|+.++++.
T Consensus 76 ~~~~v~G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~- 152 (398)
T TIGR01751 76 LPFHIIGSDASG--VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQ- 152 (398)
T ss_pred CCceecccceEE--EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHH-
Confidence 23 389999887 999999999999999999863 7899999999988
Q ss_pred ceecCCCCCCChhhh-hhhcCChhhhHHHHHHh--hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHH
Q 019012 120 LRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHE--VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196 (347)
Q Consensus 120 ~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~--~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~ 196 (347)
++++ |++ ++++ ++.+...+.+||+++.. ..++.+++++||+|++|++|++++|+|+.+|++++++++++++.+
T Consensus 153 ~~~v-P~~---l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~ 228 (398)
T TIGR01751 153 LMPK-PKH---LTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE 228 (398)
T ss_pred eEEC-CCC---CCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 9999 999 7875 77888899999999865 477899999999999999999999999999999988888999999
Q ss_pred HHHHHcCCCeeeecCCH---------------------HHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEE
Q 019012 197 LLKNKLGFDEAFNYNDE---------------------TDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIA 254 (347)
Q Consensus 197 ~~~~~~g~~~vi~~~~~---------------------~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v 254 (347)
.++ ++|++.++|+++. ..+.+.+.+.+.+ ++|++|||+|+..+..++++++++|+++
T Consensus 229 ~~~-~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v 307 (398)
T TIGR01751 229 YCR-ELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVV 307 (398)
T ss_pred HHH-HcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEE
Confidence 999 8999999987531 0245667777776 8999999999888999999999999999
Q ss_pred EEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcC
Q 019012 255 VCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSG 334 (347)
Q Consensus 255 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~ 334 (347)
.+|...... ...+...+..++.++.++.... .+.+++++++++++.+.+.+..++++++++++++.+.++
T Consensus 308 ~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~ 377 (398)
T TIGR01751 308 ICGGTTGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRN 377 (398)
T ss_pred EEccccCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcC
Confidence 999764421 1233445566777777765544 345788999999999998877888999999999999998
Q ss_pred cccceEEEEec
Q 019012 335 KNVGKQVVRVA 345 (347)
Q Consensus 335 ~~~gk~vv~~~ 345 (347)
...+|+|+++.
T Consensus 378 ~~~gkvvv~~~ 388 (398)
T TIGR01751 378 HHQGNVAVLVL 388 (398)
T ss_pred CCCceEEEEeC
Confidence 88899999875
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=288.28 Aligned_cols=309 Identities=24% Similarity=0.356 Sum_probs=253.5
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
++|||+++.++ +.+ ++++ ++|.|.+. ++||+|||.++++|+.|+....+.+. ..+|.++|||++|
T Consensus 1 ~~~~a~~~~~~--~~~----~~~~--~~~~p~~~---~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G-- 65 (365)
T cd08278 1 MKTTAAVVREP--GGP----FVLE--DVELDDPR---PDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAG-- 65 (365)
T ss_pred CccEEeeeccC--CCc----ceEE--EeecCCCC---CCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeE--
Confidence 36899999986 443 3554 46666554 99999999999999999998887542 3458899999888
Q ss_pred EEEEeccCCCCCCCCCEEEE----------------------------------------------------ecCcceeE
Q 019012 85 VSKVVDSDNPNFKPGDLVAG----------------------------------------------------LTGWEEYS 112 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~----------------------------------------------------~g~~~~~~ 112 (347)
+|+++|+++++|++||+|++ .|+|++|+
T Consensus 66 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~ 145 (365)
T cd08278 66 VVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYA 145 (365)
T ss_pred EEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEE
Confidence 99999999999999999984 27899999
Q ss_pred EeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEC
Q 019012 113 LIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 190 (347)
Q Consensus 113 ~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~ 190 (347)
.++++. ++++ |++ ++++ ++.++..+.||+.++.....++++++|||+|+ |++|++++|+|+..|+ +|++++.
T Consensus 146 ~v~~~~-~~~i-P~~---~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~ 219 (365)
T cd08278 146 VVHERN-VVKV-DKD---VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDI 219 (365)
T ss_pred Eecchh-EEEC-CCC---CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 999998 9999 999 7775 78899999999999988888999999999975 9999999999999999 6999999
Q ss_pred ChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCC
Q 019012 191 SSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQG 269 (347)
Q Consensus 191 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 269 (347)
++++.+.++ ++|++.+++++.. ++.+.+++.+++++|+++||+|+ ..+..++++++++|+++.+|..... ...
T Consensus 220 ~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~ 293 (365)
T cd08278 220 VDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEV 293 (365)
T ss_pred CHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----Ccc
Confidence 999999888 9999999998875 77778888773489999999985 6789999999999999999875321 112
Q ss_pred ccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee-eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 270 IHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY-VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~-~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
..+...++.+++++.++..... ...+.+++++++++++.+.+ .+...+++++++++++.+.+++.. |+||+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 294 TLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred ccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 3445556578888887654322 11467888999999998864 244567999999999999887654 77763
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=283.88 Aligned_cols=307 Identities=25% Similarity=0.302 Sum_probs=257.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.+ | + .++++ .++|.|.+ + +++++||+.++++|+.|...+.+.+......|.++|||++| +|
T Consensus 1 m~a~~~~~~--~-~--~~~~~--~~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~V 68 (341)
T cd08297 1 MKAAVVEEF--G-E--KPYEV--KDVPVPEP-G--PGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAG--VV 68 (341)
T ss_pred CceEEeecc--C-C--CCceE--EEeeCCCC-C--CCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccce--EE
Confidence 689999887 5 2 34555 44676766 4 99999999999999999988877553333447789999887 99
Q ss_pred EEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+++|++++.+++||+|+. .|+|++|+.++++. ++++ |++ ++..
T Consensus 69 ~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~l-p~~---~~~~~ 143 (341)
T cd08297 69 VAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARY-VTPI-PDG---LSFEQ 143 (341)
T ss_pred EEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEecccc-EEEC-CCC---CCHHH
Confidence 999999999999999986 37899999999998 9999 999 7775
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
++.++..++|||+++.. .++++++++||+|+.+++|++++++|+.+|++|+++++++++.+.++ ++|++++++++..
T Consensus 144 ~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~- 220 (341)
T cd08297 144 AAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS- 220 (341)
T ss_pred HHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-
Confidence 77899999999999965 58999999999999888999999999999999999999999999997 8999999998876
Q ss_pred HHHHHHHHHCCC-CccEEEeCCC-hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 215 DLVAALKRCFPQ-GIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 215 ~~~~~i~~~~~g-~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
++.+.+.+.+++ ++|++||+.+ +.....++++++++|+++.+|..... ....+...+..+++++.+.....
T Consensus 221 ~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-- 293 (341)
T cd08297 221 DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGSLVGT-- 293 (341)
T ss_pred cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEeccCC--
Confidence 788888888766 8999999766 57889999999999999999865421 12334456667888888754433
Q ss_pred chhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 293 HLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.+++++++++++.+++.+ ..+++++++++++.+..+...+|+++++
T Consensus 294 ---~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 ---RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 57789999999999987654 5679999999999999988888999874
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=286.53 Aligned_cols=306 Identities=19% Similarity=0.212 Sum_probs=245.9
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ +. +.+ .+.|.|.+. ++||+|||.++++|++|++.+.+.+.. ..+|.++|||++| +|
T Consensus 1 mka~~~~~~--~~-----~~l--~~~~~p~~~---~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G--~V 65 (351)
T cd08285 1 MKAFAMLGI--GK-----VGW--IEKPIPVCG---PNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVG--VV 65 (351)
T ss_pred CceEEEccC--Cc-----cEE--EECCCCCCC---CCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEE--EE
Confidence 689999886 43 345 446667664 999999999999999999887775432 3558999999887 99
Q ss_pred EEeccCCCCCCCCCEEEE---------------------------------ecCcceeEEeecc--ccceecCCCCCCCh
Q 019012 87 KVVDSDNPNFKPGDLVAG---------------------------------LTGWEEYSLIRKT--EQLRKIQPDHHIPL 131 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~ 131 (347)
+++|++++++++||+|++ .|+|++|+.++.+ . ++++ |++ +
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~-~~~l-P~~---~ 140 (351)
T cd08285 66 EEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADAN-LAPL-PDG---L 140 (351)
T ss_pred EEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCc-eEEC-CCC---C
Confidence 999999999999999996 2788999999974 6 8999 998 7
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeee
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
+++ ++.++..+.|||+++ ..+.++++++|||+| +|++|++++|+|+..|+ .|+++++++++.+.++ ++|++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~ 217 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVD 217 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEec
Confidence 775 778889999999997 668899999999997 59999999999999999 6899999999999998 999999999
Q ss_pred cCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccc--hHHHhhcceEeec
Q 019012 210 YNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN--LFTLVTKRITMKG 285 (347)
Q Consensus 210 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 285 (347)
++.. ++.+.+++++.+ ++|++|||+|+ ..+..++++++++|+++.+|...... ....+ ......+..++.+
T Consensus 218 ~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~i~~ 292 (351)
T cd08285 218 YKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWGVGMGHKTING 292 (351)
T ss_pred CCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhhhhccccEEEE
Confidence 8876 777888887766 89999999996 58899999999999999998754310 01111 1122234445544
Q ss_pred cccccccchhHHHHHHHHHHHHCCceee---eeecccccccHHHHHHHhhcCcc-cceEEEEe
Q 019012 286 FLQSDYLHLYPRFLDYVISNYKQGKIVY---VEDMNEGLENAPAAFVGLFSGKN-VGKQVVRV 344 (347)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~g~i~~---~~~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~ 344 (347)
..... ..+.++++++++++|.+++ .....++++++++|++.+.+++. ..|++|.+
T Consensus 293 ~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 293 GLCPG----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred eecCC----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 32211 1456888999999999998 34455799999999999998874 57998864
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=282.42 Aligned_cols=312 Identities=22% Similarity=0.245 Sum_probs=253.9
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
.||++++.++ |.+. .+++ .++|.|.+. ++||+||+.++++|+.|+.++.+.+. ....|.++|||++| +
T Consensus 1 ~~~~~~~~~~--~~~~--~~~~--~~~~~~~~~---~~ev~i~v~~~gi~~~d~~~~~g~~~-~~~~~~~~g~e~~G--~ 68 (327)
T PRK10754 1 MAKRIEFHKH--GGPE--VLQA--VEFTPADPA---ENEVQVENKAIGINYIDTYIRSGLYP-PPSLPSGLGTEAAG--V 68 (327)
T ss_pred CceEEEEecc--CChh--HeEE--eeccCCCCC---CCEEEEEEEEEEcCHHHhhhcCCCCC-CCCCCCccCcceEE--E
Confidence 3799999987 7664 4444 557777664 99999999999999999988877553 22347889999887 9
Q ss_pred EEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCE
Q 019012 86 SKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEY 160 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~ 160 (347)
|+.+|++++.+++||+|+++ |+|++|+.++++. ++++ |++ ++++ ++.++..+++||+++...+.+++|++
T Consensus 69 v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~-~~~l-p~~---~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~ 143 (327)
T PRK10754 69 VSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADK-AAIL-PDA---ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQ 143 (327)
T ss_pred EEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHH-ceeC-CCC---CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCE
Confidence 99999999999999999865 8999999999988 9999 999 7775 67788899999999988788999999
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEM 239 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~ 239 (347)
++|+|++|.+|++++|+|+.+|++|+++++++++.+.++ ++|++++++.+.. ++.+.+++.+++ ++|++|||+++..
T Consensus 144 vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~ 221 (327)
T PRK10754 144 FLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDT 221 (327)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHH
Confidence 999999999999999999999999999999999999998 8999889988776 788888988887 8999999999988
Q ss_pred HHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcce------EeeccccccccchhHHHHHHHHHHHHCCceee
Q 019012 240 LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRI------TMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY 313 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~ 313 (347)
...++++++++|+++.+|..... ........+..++. .+.+. ...+....+.++++++++.+|.+++
T Consensus 222 ~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~l~~ 294 (327)
T PRK10754 222 WEASLDCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGY--ITTREELTEASNELFSLIASGVIKV 294 (327)
T ss_pred HHHHHHHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecc--cCCHHHHHHHHHHHHHHHHCCCeee
Confidence 89999999999999999875421 11112222222221 11111 1112334556788999999999986
Q ss_pred e--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 314 V--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 314 ~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
. ....+++++++++++.+.+++..+|+||.
T Consensus 295 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 295 DVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 5 35677999999999999998888999986
|
|
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=284.42 Aligned_cols=303 Identities=25% Similarity=0.313 Sum_probs=252.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--CCCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--SSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--~~~~~p~i~G~e~~G~g 84 (347)
||++++.++ |++ +.+. +++.|.+. +++++||+.++++|+.|+..+.|.+. ....+|.++|||++|
T Consensus 1 ~ka~~~~~~--~~~----~~~~--~~~~~~~~---~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G-- 67 (340)
T cd05284 1 MKAARLYEY--GKP----LRLE--DVPVPEPG---PGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAG-- 67 (340)
T ss_pred CeeeEeccC--CCC----ceEE--eCCCCCCC---CCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeE--
Confidence 689999986 543 3554 46667664 99999999999999999988877653 234457899999887
Q ss_pred EEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
+|+++|++++.|++||+|+++ |+|++|+.+++++ ++++ |++ ++++
T Consensus 68 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-P~~---ls~~ 142 (340)
T cd05284 68 WVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRR-LVKL-PRG---LDPV 142 (340)
T ss_pred EEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHH-eEEC-CCC---CCHH
Confidence 999999999999999999864 6899999999998 9999 999 7875
Q ss_pred -hhhcCChhhhHHHHHHhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 135 -IGLLGMPGFTAYAGFHEV-CSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 135 -~a~l~~~~~ta~~al~~~-~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
+++++..+.|||+++... ..+.++++|||+|+ |++|++++|+|+..| .+|+++++++++.+.++ ++|++++++++
T Consensus 143 ~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 220 (340)
T cd05284 143 EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNAS 220 (340)
T ss_pred HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCC
Confidence 789999999999999765 46889999999995 779999999999999 79999999999999998 99999999887
Q ss_pred CHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 212 DETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+ .+...+++++.+ ++|+++|++|+ ...+.++++++++|+++.+|.... ........+.+++++.++...
T Consensus 221 ~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 221 D--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred c--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEecc
Confidence 6 467778888776 89999999996 688999999999999999986532 112233445788888876553
Q ss_pred cccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 290 DYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
. .+.++++++++++|.+++.+ ..+++++++++++.+.+++..+|+++.+
T Consensus 292 ~-----~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 292 T-----RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred c-----HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 3 45688899999999988643 4679999999999999988888998753
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=280.44 Aligned_cols=321 Identities=48% Similarity=0.741 Sum_probs=257.8
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--CCCCCCCCCCCceecc
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--SSYIPPFVPGQPVEGF 83 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--~~~~~p~i~G~e~~G~ 83 (347)
++|||.+...+.|++.++.+.++. +|.|.+ + +++|+||+.++++|+.|...+.+... .....+.++|+|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~-~--~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G- 74 (329)
T cd05288 1 SNRQVVLAKRPEGPPPPDDFELVE--VPLPEL-K--DGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVG- 74 (329)
T ss_pred CCcEEEEeccCCCCCCccceeEEe--ccCCCC-C--CCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEE-
Confidence 478999999866666666777755 666655 4 99999999999999988655544211 111125678999777
Q ss_pred eEEEEeccCCCCCCCCCEEEEecCcceeEEeec-cccceecCCCCCCChh--h-hhhh-cCChhhhHHHHHHhhcCCCCC
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRK-TEQLRKIQPDHHIPLS--Y-HIGL-LGMPGFTAYAGFHEVCSPKSG 158 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~i~p~~~~~~~--~-~~a~-l~~~~~ta~~al~~~~~~~~~ 158 (347)
+|+++|++ +|++||+|+++++|++|+.++. +. ++++ |++ ++ + ++++ +++++.|||+++.....+.++
T Consensus 75 -~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~-~~~l-P~~---~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~ 146 (329)
T cd05288 75 -EVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASG-LRKL-DPS---LGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPG 146 (329)
T ss_pred -EEEecCCC--CCCCCCEEecccceEEEEEecchhh-cEEC-Ccc---cCCCHHHHHHhcccHHHHHHHHHHhccCCCCC
Confidence 99999964 7999999999999999999999 88 9999 998 63 3 3444 999999999999887889999
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH-cCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK-LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
++|||+|++|++|++++|+|+..|++|+++++++++.+.++ + +|+++++++++. ++.+.+.+.+++++|++|||+|+
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~ 224 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV-EELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGG 224 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchH
Confidence 99999999999999999999999999999999999999998 6 999999998876 77888888775689999999999
Q ss_pred hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeec
Q 019012 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
..++.++++++++|+++.+|..............+....+.++.++.+...........+.+.++++++.+|.+++....
T Consensus 225 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~ 304 (329)
T cd05288 225 EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDV 304 (329)
T ss_pred HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccc
Confidence 89999999999999999998754321100000123455677888888876544333335678899999999999887667
Q ss_pred ccccccHHHHHHHhhcCcccceEEE
Q 019012 318 NEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.+++++++++++.+.+++..+|+++
T Consensus 305 ~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 305 VEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccHHHHHHHHHHHhcCCCccceeC
Confidence 7899999999999988877778764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=282.83 Aligned_cols=309 Identities=19% Similarity=0.213 Sum_probs=246.7
Q ss_pred ceEEEeccc-CCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 8 KQVIFRGYI-EGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 8 ~a~~~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||+++.++. -|.++ .+...++|.|.+. ++||+|||.++++|+.|...+.+... ....|.++|+|++| +|
T Consensus 1 ~~~~~~~~~~~~~~~----~~~~~~~~~p~~~---~~ev~Ikv~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G--~V 70 (336)
T TIGR02817 1 KAVGYKKPLPITDPD----ALVDIDLPKPKPG---GRDLLVEVKAISVNPVDTKVRARMAP-EAGQPKILGWDAAG--VV 70 (336)
T ss_pred CceeeccccCCCCcc----cceecccCCCCCC---CCEEEEEEEEEEcChHHHHHHcCCCC-CCCCCcccceeeEE--EE
Confidence 577777741 02232 4555668888775 99999999999999999987777432 23457899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC--
Q 019012 87 KVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS-- 157 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~-- 157 (347)
+++|+++++|++||+|+++ |+|++|+.++++. ++++ |++ ++++ +++++..+.|||+++....++++
T Consensus 71 ~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 145 (336)
T TIGR02817 71 VAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERI-VGHK-PKS---LSFAEAAALPLTSITAWELLFDRLGINDPV 145 (336)
T ss_pred EEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHH-cccC-CCC---CCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999985 7899999999998 9999 999 7875 78899999999999988888877
Q ss_pred ---CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 158 ---GEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 158 ---~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
|++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++.. ++...+++..++++|+++|
T Consensus 146 ~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~ 222 (336)
T TIGR02817 146 AGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFS 222 (336)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999998 999999999999999998 899999998664 5677777754448999999
Q ss_pred CCC-hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc--c---ccchh--HHHHHHHHHH
Q 019012 234 NVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS--D---YLHLY--PRFLDYVISN 305 (347)
Q Consensus 234 ~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~--~~~~~~~~~~ 305 (347)
+++ ++....++++++++|+++.++... ..+...+..+++++.+.... . .+... .+.+++++++
T Consensus 223 ~~~~~~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (336)
T TIGR02817 223 LTHTDQHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARL 293 (336)
T ss_pred cCCcHHHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHH
Confidence 985 578899999999999999875321 12223344454555543221 1 01111 2568999999
Q ss_pred HHCCceeeeeeccc---ccccHHHHHHHhhcCcccceEEEE
Q 019012 306 YKQGKIVYVEDMNE---GLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 306 l~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
+.++.+++.+...+ +++++++|++.+.+++..+|++++
T Consensus 294 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 294 VDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 99999988766555 468999999999998888898874
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=279.77 Aligned_cols=311 Identities=23% Similarity=0.313 Sum_probs=246.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.+ +++. .+++ .++|.|.+. +++|+||+.++++|+.|+..+.|.+......|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~~--~~~~--~~~~~p~~~---~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v 69 (325)
T cd05280 1 FKALVVEEQ--DGGV--SLFL--RTLPLDDLP---EGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAG--TV 69 (325)
T ss_pred CceEEEccc--CCCC--cceE--EeCCCCCCC---CCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEE--EE
Confidence 689999987 6543 3455 446777664 99999999999999999988888653333457899999888 88
Q ss_pred EEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCC-
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSP- 155 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~- 155 (347)
+++ +++.|++||+|++. |+|++|+.++++. ++++ |++ ++++ ++.+++.+.+||+++......
T Consensus 70 ~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~-~~~l-p~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~ 142 (325)
T cd05280 70 VSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADW-VVPL-PEG---LSLREAMILGTAGFTAALSVHRLEDNG 142 (325)
T ss_pred EEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhh-EEEC-CCC---CCHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 888 56789999999984 7999999999998 9999 999 7775 788999999999998654433
Q ss_pred -C-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 -K-SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 -~-~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
. .+++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++++++.++. . ....+....+++|++||
T Consensus 143 ~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d~vi~ 219 (325)
T cd05280 143 QTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWAGAID 219 (325)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCccEEEE
Confidence 5 3579999999999999999999999999999999999999998 9999988887642 1 22233333347999999
Q ss_pred CCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc-chhHHHHHHHHHHHHCCcee
Q 019012 234 NVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL-HLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~i~ 312 (347)
++++..+..++++++++|+++.+|.....+ .......++.+++++.+....... ....+.++.+.+++..+. .
T Consensus 220 ~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 293 (325)
T cd05280 220 TVGGDVLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL-L 293 (325)
T ss_pred CCchHHHHHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC-c
Confidence 999999999999999999999999764321 122333455788888887654332 233456677777777774 4
Q ss_pred eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 313 YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 313 ~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.+..++++++++++++.+.+++..||+|+++
T Consensus 294 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 294 EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 45677889999999999999998889999863
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=282.88 Aligned_cols=305 Identities=22% Similarity=0.253 Sum_probs=252.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC-----------CCCCCCC
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS-----------SYIPPFV 75 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~-----------~~~~p~i 75 (347)
|||+++..+ +.+ +++ .++|.|.+. ++||+||+.++++|+.|+..+.+.+.. ....|.+
T Consensus 1 ~~a~~~~~~--~~~----~~~--~~~~~p~~~---~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 69 (350)
T cd08240 1 MKAAAVVEP--GKP----LEE--VEIDTPKPP---GTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLV 69 (350)
T ss_pred CeeEEeccC--CCC----ceE--EecCCCCCC---CCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcc
Confidence 688888876 433 344 457777664 999999999999999999887774321 2234688
Q ss_pred CCCceecceEEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCC
Q 019012 76 PGQPVEGFGVSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQP 125 (347)
Q Consensus 76 ~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p 125 (347)
+|||++| +|+++|++++.+++||+|+++ |+|++|+.++.+. ++++ |
T Consensus 70 ~g~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p 145 (350)
T cd08240 70 LGHEIVG--EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSR-YLVD-P 145 (350)
T ss_pred cccceeE--EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHH-eeeC-C
Confidence 9999888 999999999999999999864 7899999999998 9999 9
Q ss_pred CCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcC
Q 019012 126 DHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG 203 (347)
Q Consensus 126 ~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g 203 (347)
++ +++. +++++..++|||+++.....+.++++|||+| +|++|++++|+|+..|+ +|++++.++++.+.++ ++|
T Consensus 146 ~~---~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g 220 (350)
T cd08240 146 GG---LDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAG 220 (350)
T ss_pred CC---CCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhC
Confidence 99 7775 7788999999999997776677899999996 59999999999999999 7999999999999998 899
Q ss_pred CCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceE
Q 019012 204 FDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRIT 282 (347)
Q Consensus 204 ~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
++.+++.++. ++.+.+.+..++++|++||++|+ ..+..++++|+++|+++.+|..... ..........++.+
T Consensus 221 ~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~ 293 (350)
T cd08240 221 ADVVVNGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALT 293 (350)
T ss_pred CcEEecCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcE
Confidence 9888888775 66677777665589999999985 6889999999999999999875432 11222334557888
Q ss_pred eeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 283 MKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
+.+..... .+.+.+++++++++.+++.+...+++++++++++.+.+++..+|++++
T Consensus 294 i~~~~~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 294 IQGSYVGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEEcccCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 87776654 467888999999999987777778999999999999988888898875
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=279.72 Aligned_cols=300 Identities=26% Similarity=0.339 Sum_probs=253.1
Q ss_pred EEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe-
Q 019012 27 IKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL- 105 (347)
Q Consensus 27 ~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~- 105 (347)
+...+.|.|.+ + +++|+|||.++++|+.|...+.+.+......|.++|||++| +|+.+|++++++++||+|+++
T Consensus 14 ~~~~~~~~~~~-~--~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~~G~~v~~~~~Gd~V~~~~ 88 (323)
T cd05282 14 LELVSLPIPPP-G--PGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVG--VVVEVGSGVSGLLVGQRVLPLG 88 (323)
T ss_pred EEeEeCCCCCC-C--CCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEE--EEEEeCCCCCCCCCCCEEEEeC
Confidence 44444677765 4 99999999999999999988877654334457899999888 999999999999999999996
Q ss_pred --cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC
Q 019012 106 --TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182 (347)
Q Consensus 106 --g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G 182 (347)
|+|++|+.++.+. ++++ |++ +++. ++.++..+.+||+++.....+.++++|||+|++|.+|++++++|+.+|
T Consensus 89 ~~g~~~~~~~~~~~~-~~~l-p~~---~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g 163 (323)
T cd05282 89 GEGTWQEYVVAPADD-LIPV-PDS---ISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLG 163 (323)
T ss_pred CCCcceeEEecCHHH-eEEC-CCC---CCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCC
Confidence 7999999999988 9999 998 7764 778889999999999888888999999999999999999999999999
Q ss_pred CEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEccccc
Q 019012 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 183 ~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
++|+++++++++.+.++ ++|+++++++++. ++...+++.+.+ ++|++|||+|+......+++++++|+++.+|....
T Consensus 164 ~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~ 241 (323)
T cd05282 164 FKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSG 241 (323)
T ss_pred CeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCC
Confidence 99999999999999998 9999999998876 788888888877 89999999999888899999999999999987543
Q ss_pred ccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcc
Q 019012 262 HSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKN 336 (347)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~ 336 (347)
. ........+..+++++.+.....+ +....+.++++++++.++.+.+.+...+++++++++++.+..++.
T Consensus 242 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~ 316 (323)
T cd05282 242 E-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGR 316 (323)
T ss_pred C-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCC
Confidence 2 112233344447888887765432 344567899999999999998877778899999999999998887
Q ss_pred cceEEEE
Q 019012 337 VGKQVVR 343 (347)
Q Consensus 337 ~gk~vv~ 343 (347)
.+|++++
T Consensus 317 ~~kvv~~ 323 (323)
T cd05282 317 GGKVLLT 323 (323)
T ss_pred CceEeeC
Confidence 7888863
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=284.04 Aligned_cols=306 Identities=27% Similarity=0.399 Sum_probs=255.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||||+++.+ +.+ +.+. +.|.|.+ + ++||+||+.++++|+.|+..+.+.+. ..+|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~----~~~~--~~~~~~~-~--~~~v~v~v~~~~l~~~d~~~~~~~~~--~~~p~~~g~e~~G--~v 65 (367)
T cd08263 1 MKAAVLKGP--NPP----LTIE--EIPVPRP-K--EGEILIRVAACGVCHSDLHVLKGELP--FPPPFVLGHEISG--EV 65 (367)
T ss_pred CeeEEEecC--CCC----cEEE--EeeCCCC-C--CCeEEEEEEEeeeCcchHHHhcCCCC--CCCCcccccccce--EE
Confidence 689999886 432 4554 4676766 4 99999999999999999988877552 2567899999888 99
Q ss_pred EEeccCCCC---CCCCCEEEE----------------------------------------------------ecCccee
Q 019012 87 KVVDSDNPN---FKPGDLVAG----------------------------------------------------LTGWEEY 111 (347)
Q Consensus 87 ~~vg~~v~~---~~~Gd~V~~----------------------------------------------------~g~~~~~ 111 (347)
+.+|+++++ |++||+|++ .|+|++|
T Consensus 66 ~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 145 (367)
T cd08263 66 VEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEY 145 (367)
T ss_pred EEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeE
Confidence 999999988 999999987 2789999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSA 189 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~ 189 (347)
+.++++. ++++ |++ +++. +++++..++|||+++.....+.++++|||+| +|++|++++++|+..|++ |++++
T Consensus 146 ~~~~~~~-~~~~-P~~---is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~ 219 (367)
T cd08263 146 AVVPATA-LAPL-PES---LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVD 219 (367)
T ss_pred EEechhh-EEEC-CCC---CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEe
Confidence 9999998 9999 999 7874 8899999999999998878889999999996 699999999999999997 99998
Q ss_pred CChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCC
Q 019012 190 GSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDP 267 (347)
Q Consensus 190 ~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 267 (347)
.++++.+.++ ++|++.+++++.. ++.+.+++.+++ ++|++||++++. ....++++++++|+++.++..... .
T Consensus 220 ~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~ 293 (367)
T cd08263 220 VRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----A 293 (367)
T ss_pred CCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----C
Confidence 8999999998 8999999998876 788888887766 899999999987 889999999999999999865321 1
Q ss_pred CCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 268 QGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
........++.+++++.++.... ..+.+++++++++++.+++. +...++++++.++++.+.+++..||+||+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 294 TAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred ccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 12234445557888877753322 14678999999999998874 45677999999999999998888899873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=278.77 Aligned_cols=312 Identities=23% Similarity=0.337 Sum_probs=239.7
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.+. |++. .+...++|.|.+ + ++||+||+.++++|++|.....+........|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~~----~~~~~~~~~p~~-~--~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~V 69 (326)
T cd08289 1 FQALVVEKD--EDDV----SVSVKNLTLDDL-P--EGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAG--TV 69 (326)
T ss_pred CeeEEEecc--CCcc----eeEEEEccCCCC-C--CCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeE--EE
Confidence 689999987 6653 334455777766 4 99999999999999999866543221123458999999888 88
Q ss_pred EEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhc--C
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVC--S 154 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~--~ 154 (347)
++. ++++|++||+|++. |+|++|+.++++. ++++ |++ ++++ ++.++..+.|||+++.... .
T Consensus 70 ~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~---~~~~~a~~~~~~~~ta~~~l~~~~~~~ 142 (326)
T cd08289 70 VES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEW-VVPL-PKG---LTLKEAMILGTAGFTAALSIHRLEENG 142 (326)
T ss_pred EEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHH-eEEC-CCC---CCHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 775 45779999999974 8999999999998 9999 999 7875 7888889999999885432 2
Q ss_pred -CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 155 -PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 155 -~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
..++++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++++++.++. ..+.+++.+++++|++||
T Consensus 143 ~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld 219 (326)
T cd08289 143 LTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVD 219 (326)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEE
Confidence 345789999999999999999999999999999999999999998 9999888887653 345566665448999999
Q ss_pred CCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCcee
Q 019012 234 NVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~ 312 (347)
++|+..+..++++++++|+++.+|..... ........++.+++++.+...... .....+.++.+...+....+.
T Consensus 220 ~~g~~~~~~~~~~l~~~G~~i~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (326)
T cd08289 220 PVGGKTLAYLLSTLQYGGSVAVSGLTGGG-----EVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLL 294 (326)
T ss_pred CCcHHHHHHHHHHhhcCCEEEEEeecCCC-----CCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccc
Confidence 99998899999999999999999975321 112234456688888888754221 111233444444443323333
Q ss_pred eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 313 YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 313 ~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
..+..+++++++.+|++.+.+++..+|+|+++
T Consensus 295 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 295 NEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 34567789999999999999998889999864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=282.09 Aligned_cols=305 Identities=23% Similarity=0.233 Sum_probs=250.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.++ +. +.+ .++|.|.++. +++|+|||.++++|+.|+..+.+.+.. ..+|.++|||++| +|
T Consensus 1 ~ka~~~~~~--~~-----~~~--~~~~~p~~~~--~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G--~V 66 (347)
T cd05278 1 MKALVYLGP--GK-----IGL--EEVPDPKIQG--PHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVG--EV 66 (347)
T ss_pred CceEEEecC--Cc-----eEE--EEcCCCCCCC--CCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEE--EE
Confidence 588999875 42 344 4577776634 999999999999999999888886633 4558999999888 99
Q ss_pred EEeccCCCCCCCCCEEEE---------------------------------ecCcceeEEeecc--ccceecCCCCCCCh
Q 019012 87 KVVDSDNPNFKPGDLVAG---------------------------------LTGWEEYSLIRKT--EQLRKIQPDHHIPL 131 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~ 131 (347)
+++|++++++++||+|++ .|+|++|++++++ . ++++ |++ +
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~---~ 141 (347)
T cd05278 67 VEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI-PDG---L 141 (347)
T ss_pred EEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCe-EEEC-CCC---C
Confidence 999999999999999987 2789999999987 6 9999 999 7
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeee
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
+++ ++.++..++|||+++ ...+++++++|||.| .|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.+++
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~ 218 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIIN 218 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEc
Confidence 775 788899999999998 678899999999976 49999999999999997 8999988888888888 999999999
Q ss_pred cCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 210 YNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 210 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
+++. ++.+.+++.+++ ++|++||++++ ..+..++++|+++|+++.+|..... .........+.+++++.+..
T Consensus 219 ~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~ 292 (347)
T cd05278 219 PKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTFKTGL 292 (347)
T ss_pred CCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEEEeec
Confidence 8876 788888888776 89999999987 6889999999999999999864332 10111223346777777654
Q ss_pred cccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcc-cceEEEEe
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKN-VGKQVVRV 344 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~ 344 (347)
... .+.++++++++.++.+++. ....+++++++++++.+..++. .+|+|+++
T Consensus 293 ~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 293 VPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred cCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 322 5678999999999999864 4566799999999999988776 67888763
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=275.88 Aligned_cols=309 Identities=23% Similarity=0.325 Sum_probs=247.3
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
||++++.. |.|+ .++.+++|.|.+. +++|+||+.++++|+.|+..+.|.+......|.++|||++| +|+
T Consensus 1 ~a~~~~~~--~~~~----~~~~~~~~~p~~~---~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~V~ 69 (323)
T TIGR02823 1 KALVVEKE--DGKV----SAQVETLDLSDLP---EGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAG--TVV 69 (323)
T ss_pred CeEEEccC--CCCc----ceeEeecCCCCCC---CCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEE--EEE
Confidence 68888887 6664 5555668888764 99999999999999999988888653323458899999888 777
Q ss_pred EeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhh--cCC
Q 019012 88 VVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEV--CSP 155 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~--~~~ 155 (347)
. +++..|++||+|+++ |+|++|+.++++. ++++ |++ ++++ ++.++..+.+|++++... ..+
T Consensus 70 ~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-P~~---~~~~~aa~~~~~~~ta~~~~~~~~~~~~ 142 (323)
T TIGR02823 70 S--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADW-LVPL-PEG---LSLREAMALGTAGFTAALSVMALERNGL 142 (323)
T ss_pred e--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhh-eEEC-CCC---CCHHHhhhhhhhHHHHHHHHHHhhhcCC
Confidence 6 567789999999975 7999999999998 9999 999 7875 778888999999887543 347
Q ss_pred CCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGE-YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~-~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+++ +|||+|++|++|++++++|+.+|++|++++.++++.+.++ ++|++.+++.++. +. .++.+..+++|+++||
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~ 218 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDT 218 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEEC
Confidence 8898 9999999999999999999999999999988888889998 9999888887653 32 4555555579999999
Q ss_pred CChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceee
Q 019012 235 VGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVY 313 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~ 313 (347)
+|++.+..++++++++|+++.+|..... ........++.+++++.+...... .....+.++.+.+++..+.+++
T Consensus 219 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (323)
T TIGR02823 219 VGGHTLANVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES 293 (323)
T ss_pred ccHHHHHHHHHHhCCCCEEEEEcccCCC-----CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC
Confidence 9998899999999999999999975331 112233445578888888654322 2223455777888888888775
Q ss_pred eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 314 VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 314 ~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
. ...++++++++|++.+.+++..+|+|+++
T Consensus 294 ~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 294 I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 4 44779999999999999988888998863
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-37 Score=278.60 Aligned_cols=302 Identities=22% Similarity=0.238 Sum_probs=248.9
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||+++++++ +.+. .+ .++|.|.+. ++||+|||.++++|+.|+..+.|.+. ...|.++|||++| +|
T Consensus 1 mka~~~~~~--~~~~----~~--~~~~~p~~~---~~evlv~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G--~V 65 (338)
T PRK09422 1 MKAAVVNKD--HTGD----VV--VEKTLRPLK---HGEALVKMEYCGVCHTDLHVANGDFG--DKTGRILGHEGIG--IV 65 (338)
T ss_pred CeEEEecCC--CCCc----eE--EEecCCCCC---CCeEEEEEEEEeechhHHHHHcCCCC--CCCCccCCcccce--EE
Confidence 789999986 6542 24 457777664 99999999999999999988877542 2347899999888 99
Q ss_pred EEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+++|++++.|++||+|++ .|+|++|+.++.+. ++++ |++ ++++
T Consensus 66 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~---~~~~~ 140 (338)
T PRK09422 66 KEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADY-AVKV-PEG---LDPAQ 140 (338)
T ss_pred EEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHH-eEeC-CCC---CCHHH
Confidence 999999999999999986 37899999999988 9999 999 8875
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEECChHhHHHHHHHcCCCeeeecCC-
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND- 212 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~-~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~- 212 (347)
+++++..++|||+++ ..+++++|++|||+| +|++|++++++|+. .|++|+++++++++.+.++ ++|++.+++++.
T Consensus 141 aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~ 217 (338)
T PRK09422 141 ASSITCAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRV 217 (338)
T ss_pred eehhhcchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEeccccc
Confidence 789999999999998 778899999999999 59999999999998 4999999999999999998 999998998864
Q ss_pred HHHHHHHHHHHCCCCcc-EEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 213 ETDLVAALKRCFPQGID-IYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 213 ~~~~~~~i~~~~~g~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
. ++.+.+++.++ ++| +++++.++..+..++++++++|+++.+|.... ........+..++.++.++....
T Consensus 218 ~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~- 288 (338)
T PRK09422 218 E-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSLVGT- 288 (338)
T ss_pred c-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEecCCC-
Confidence 4 66777877766 688 45555566789999999999999999986532 11234455666777776654333
Q ss_pred cchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 292 LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
.+.++++++++++|.+.+.+. .+++++++++++.+.+++..+|+++++.
T Consensus 289 ----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 289 ----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred ----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 466889999999999876654 4699999999999999988899998753
|
|
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=278.11 Aligned_cols=307 Identities=21% Similarity=0.293 Sum_probs=255.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||||++.++ +.+ +.+ .++|.|.+. +++|+||+.++++|+.|+..+.|.+. ...+|.++|+|++| +|
T Consensus 1 m~a~~~~~~--~~~----~~~--~~~~~~~~~---~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G--~V 66 (345)
T cd08260 1 MRAAVYEEF--GEP----LEI--REVPDPEPP---PDGVVVEVEACGVCRSDWHGWQGHDP-DVTLPHVPGHEFAG--VV 66 (345)
T ss_pred CeeEEEecC--CCC----cEE--EEccCCCCC---CCeEEEEEEEeeccHHHHHHhcCCCC-CCCCCeeeccceeE--EE
Confidence 699999886 543 345 446777664 99999999999999999988877543 23457899999887 99
Q ss_pred EEeccCCCCCCCCCEEEE------------------------------ecCcceeEEeecc--ccceecCCCCCCChhhh
Q 019012 87 KVVDSDNPNFKPGDLVAG------------------------------LTGWEEYSLIRKT--EQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~~~~ 134 (347)
+.+|++++.|++||+|++ .|+|++|+.+++. . ++++ |++ ++.+
T Consensus 67 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~i-P~~---~~~~ 141 (345)
T cd08260 67 VEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVN-LVRL-PDD---VDFV 141 (345)
T ss_pred EEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCc-eEEC-CCC---CCHH
Confidence 999999999999999986 3789999999974 6 9999 999 7775
Q ss_pred -hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCC-
Q 019012 135 -IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND- 212 (347)
Q Consensus 135 -~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~- 212 (347)
++.++..++|||+++.+..++.+++++||+| +|++|++++++|+..|++|+++++++++.+.++ ++|+++++++++
T Consensus 142 ~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~ 219 (345)
T cd08260 142 TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEV 219 (345)
T ss_pred HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccc
Confidence 7788899999999997788899999999999 699999999999999999999999999999998 899999999887
Q ss_pred HHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 213 ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 213 ~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
. ++...+.++..+++|++||++|+ ..+..++++++++|+++.+|....... ........+..+++++.+.....
T Consensus 220 ~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~- 294 (345)
T cd08260 220 E-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGSHGMP- 294 (345)
T ss_pred h-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeCCcCC-
Confidence 5 77777887776689999999984 688899999999999999987543210 01233445557788888776533
Q ss_pred cchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 292 LHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.+.+++++++++++.+.+. +...+++++++++++.+.+++..+|+|++
T Consensus 295 ----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 295 ----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred ----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 5678889999999988764 45677999999999999998888888864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=281.78 Aligned_cols=305 Identities=22% Similarity=0.243 Sum_probs=249.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + .+.+. ++|.|.+.. +++|+||+.++++|++|+..+.|.+.. ..+|.++|||++| +|
T Consensus 1 m~a~~~~~~--~-----~~~~~--~~~~p~~~~--~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G--~V 66 (386)
T cd08283 1 MKALVWHGK--G-----DVRVE--EVPDPKIED--PTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMG--VV 66 (386)
T ss_pred CeeEEEecC--C-----CceEE--eCCCCCCCC--CCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceE--EE
Confidence 688888754 2 34554 466676644 899999999999999999998886533 3468999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe--------------------------------------------------cCcceeEEeec
Q 019012 87 KVVDSDNPNFKPGDLVAGL--------------------------------------------------TGWEEYSLIRK 116 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~--------------------------------------------------g~~~~~~~v~~ 116 (347)
+++|++++++++||+|++. |+|++|+.+++
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 146 (386)
T cd08283 67 EEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPF 146 (386)
T ss_pred EEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEccc
Confidence 9999999999999999762 68899999998
Q ss_pred c--ccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 117 T--EQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 117 ~--~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
+ . ++++ |++ ++++ +++++..++|||+++ ..+++.+|++|||+| +|++|++++++|+..|+ +|++++.++
T Consensus 147 ~~~~-~~~l-p~~---~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~ 219 (386)
T cd08283 147 ADVG-PFKI-PDD---LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVP 219 (386)
T ss_pred ccCe-EEEC-CCC---CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 7 6 8999 999 8875 778899999999999 778999999999997 59999999999999998 699999999
Q ss_pred HhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh----------------------hHHHHHHhhhc
Q 019012 193 QKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE----------------------MLDAALLNMRD 249 (347)
Q Consensus 193 ~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~----------------------~~~~~~~~l~~ 249 (347)
++.+.++ +++...++++...+++.+.+++++.+ ++|++||++|++ .++.+++++++
T Consensus 220 ~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 298 (386)
T cd08283 220 ERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRK 298 (386)
T ss_pred HHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhcc
Confidence 9999999 77434677777641378888888877 899999999753 57889999999
Q ss_pred CCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHH
Q 019012 250 HGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAA 327 (347)
Q Consensus 250 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a 327 (347)
+|+++.+|..... .........+.+++++.+..... .+.++++++++.++.+.+. +...++++++++|
T Consensus 299 ~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a 368 (386)
T cd08283 299 GGTVSIIGVYGGT-----VNKFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHRLPLEDAPEA 368 (386)
T ss_pred CCEEEEEcCCCCC-----cCccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHH
Confidence 9999999875431 11233445678888888865322 5678999999999999874 4567799999999
Q ss_pred HHHhhcCc-ccceEEEE
Q 019012 328 FVGLFSGK-NVGKQVVR 343 (347)
Q Consensus 328 ~~~~~~~~-~~gk~vv~ 343 (347)
++.+.+++ ..+|+||+
T Consensus 369 ~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 369 YKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHHHhCCCCeEEEEec
Confidence 99998877 45799885
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=273.20 Aligned_cols=299 Identities=23% Similarity=0.267 Sum_probs=244.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.+. + |. .+...+.|.|.+ . ++||+||+.++++|+.|+..... ...|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~-~~----~~~~~~~~~p~~-~--~~ev~v~v~~~~i~~~d~~~~~~-----~~~~~~~g~e~~G--~v 63 (305)
T cd08270 1 MRALVVDPD--A-PL----RLRLGEVPDPQP-A--PHEALVRVAAISLNRGELKFAAE-----RPDGAVPGWDAAG--VV 63 (305)
T ss_pred CeEEEEccC--C-Cc----eeEEEecCCCCC-C--CCEEEEEEEEEecCHHHHHhhcc-----CCCCCcccceeEE--EE
Confidence 588988875 5 43 344445677765 4 99999999999999999976652 2346789999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+++|++++.|++||+|+++ |+|++|+.++.+. ++++ |++ ++++ +++++..+.|||+++...... +|++++
T Consensus 64 ~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vl 137 (305)
T cd08270 64 ERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGW-LAVL-PDG---VSFAQAATLPVAGVTALRALRRGGPL-LGRRVL 137 (305)
T ss_pred EEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHH-eEEC-CCC---CCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEE
Confidence 9999999999999999986 7999999999998 9999 999 7775 788999999999999665544 599999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~ 242 (347)
|+|+.|++|++++++|+..|++|+++++++++.+.++ ++|++.+++... + +.++++|+++|++|+..+..
T Consensus 138 i~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~ 207 (305)
T cd08270 138 VTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLAR 207 (305)
T ss_pred EECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHH
Confidence 9999999999999999999999999999999999999 799876554332 1 22247999999999988999
Q ss_pred HHHhhhcCCeEEEEcccccccCCCCCCccchHHHhh--cceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccc
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT--KRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEG 320 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~ 320 (347)
++++++.+|+++.+|..... ........+.. ++.++.++.... +....+.++.+++++.++.+++.+..+++
T Consensus 208 ~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 281 (305)
T cd08270 208 ALELLAPGGTVVSVGSSSGE-----PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGS 281 (305)
T ss_pred HHHHhcCCCEEEEEeccCCC-----cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEc
Confidence 99999999999999875421 12223333433 578877776553 33446778999999999999987777889
Q ss_pred cccHHHHHHHhhcCcccceEEEEe
Q 019012 321 LENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 321 l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+++++++++.+.+++..+|+|+++
T Consensus 282 ~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 282 WTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHHHHcCCCCceEEEeC
Confidence 999999999999888888999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=280.43 Aligned_cols=304 Identities=25% Similarity=0.299 Sum_probs=247.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.+ | + .++.+ .++|.|.+. ++||+||+.++++|+.|+..+.+.+ ....|.++|||++| +|
T Consensus 1 m~a~~~~~~--~-~--~~~~~--~~~~~p~~~---~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G--~v 66 (339)
T cd08249 1 QKAAVLTGP--G-G--GLLVV--VDVPVPKPG---PDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAG--TV 66 (339)
T ss_pred CceEEeccC--C-C--Ccccc--cCCCCCCCC---CCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeE--EE
Confidence 689999887 5 4 24445 557778774 9999999999999999998776643 12357889999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe-----------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcC
Q 019012 87 KVVDSDNPNFKPGDLVAGL-----------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCS 154 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~ 154 (347)
+.+|++++.|++||+|+++ |+|++|+.++.+. ++++ |++ ++++ ++.++..+.|||+++.+..+
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~~~~~~~~~~ta~~~l~~~~~ 141 (339)
T cd08249 67 VEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADL-TAKI-PDN---ISFEEAATLPVGLVTAALALFQKLG 141 (339)
T ss_pred EEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhh-eEEC-CCC---CCHHHceecchHHHHHHHHHhcccc
Confidence 9999999999999999986 7999999999988 9999 998 7775 77888999999999876654
Q ss_pred C----------CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC
Q 019012 155 P----------KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 155 ~----------~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
+ .+++++||+|++|++|++++++|+..|++|++++ ++++.+.++ ++|++++++++.. ++.+.+++.+
T Consensus 142 ~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~ 218 (339)
T cd08249 142 LPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAAT 218 (339)
T ss_pred CCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhc
Confidence 4 7899999999999999999999999999999888 568889998 8999999998876 7888888887
Q ss_pred CCCccEEEeCCCh-hhHHHHHHhhhc--CCeEEEEcccccccCCCCCCccchHHHhhcceEeec---cccc----cccch
Q 019012 225 PQGIDIYFDNVGG-EMLDAALLNMRD--HGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG---FLQS----DYLHL 294 (347)
Q Consensus 225 ~g~~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~ 294 (347)
++++|++||++|+ ..+..+++++++ +|+++.++...... . ...+.+... .... ..+..
T Consensus 219 ~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T cd08249 219 GGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------E------PRKGVKVKFVLGYTVFGEIPEDREF 286 (339)
T ss_pred CCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------c------CCCCceEEEEEeeeecccccccccc
Confidence 7789999999998 789999999999 99999998754321 0 011111111 1111 11333
Q ss_pred hHHHHHHHHHHHHCCceeeeeecccc--cccHHHHHHHhhcCc-ccceEEEEe
Q 019012 295 YPRFLDYVISNYKQGKIVYVEDMNEG--LENAPAAFVGLFSGK-NVGKQVVRV 344 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i~~~~~~~~~--l~~~~~a~~~~~~~~-~~gk~vv~~ 344 (347)
....++++++++.++.+.+.+...++ ++++++|++.+.+++ ..+|+|+++
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 287 GEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred hHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 35678889999999999987666777 999999999999988 888999864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=277.18 Aligned_cols=302 Identities=19% Similarity=0.165 Sum_probs=242.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + .+.+ .++|.|.+. ++|++||+.++++|+.|+..+.|.+.. ...|.++|||++| +|
T Consensus 1 m~a~~~~~~--~-----~~~~--~~~~~p~~~---~~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G--~V 65 (339)
T PRK10083 1 MKSIVIEKP--N-----SLAI--EERPIPQPA---AGEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFG--VI 65 (339)
T ss_pred CeEEEEecC--C-----eeEE--EeccCCCCC---CCeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEE--EE
Confidence 588888875 3 3455 457777764 999999999999999999888775422 2458999999887 99
Q ss_pred EEeccCCCCCCCCCEEE---------------------------Ee---cCcceeEEeeccccceecCCCCCCChhhhhh
Q 019012 87 KVVDSDNPNFKPGDLVA---------------------------GL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIG 136 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a 136 (347)
+.+|++++.+++||+|+ ++ |+|++|+.++++. ++++ |++ ++++.+
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~---~~~~~a 140 (339)
T PRK10083 66 DAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKN-AHRI-PDA---IADQYA 140 (339)
T ss_pred EEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHH-eEEC-cCC---CCHHHH
Confidence 99999999999999998 33 7999999999998 9999 999 777655
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKL-HGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~-~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
++..++.++++++ ...++++|++|||+| .|++|++++|+|+. +|+ .++++++++++.+.++ ++|+++++++++.
T Consensus 141 ~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~- 216 (339)
T PRK10083 141 VMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE- 216 (339)
T ss_pred hhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-
Confidence 5777888898655 678899999999999 59999999999996 699 5777888889999998 9999999998765
Q ss_pred HHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 215 DLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 215 ~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
++.+.+.. .+ ++|++||++|+ ..+..++++++++|+++.+|..... ...+...+..+++++.+...
T Consensus 217 ~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 217 PLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP------SEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred cHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------ceecHHHHhhcceEEEEEec----
Confidence 66666643 23 57899999995 5799999999999999999875321 12233344457777666432
Q ss_pred chhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCc-ccceEEEEecC
Q 019012 293 HLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGK-NVGKQVVRVAC 346 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~~~ 346 (347)
..+.++++++++.+|.+++. +...++++++++|++.+.+++ ..+|+++++.+
T Consensus 285 --~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 --NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred --ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 14568999999999999873 667789999999999998654 45899998764
|
|
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=278.54 Aligned_cols=310 Identities=20% Similarity=0.244 Sum_probs=244.6
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
.+||+.++... +++ +.+ .++|.|.+. ++||+|||.++++|++|++.+.|.+ ...+|.++|||++|
T Consensus 6 ~~~~a~~~~~~--~~~----~~l--~~~p~p~~~---~~~vlvkv~~~gi~~~D~~~~~g~~--~~~~p~v~G~e~~G-- 70 (373)
T cd08299 6 IKCKAAVLWEP--KKP----FSI--EEIEVAPPK---AHEVRIKIVATGICRSDDHVVSGKL--VTPFPVILGHEAAG-- 70 (373)
T ss_pred ceeEEEEEecC--CCC----cEE--EEeecCCCC---CCEEEEEEEEEEcCcccHHHhcCCC--CCCCCccccccceE--
Confidence 45888888875 332 455 457777664 9999999999999999999888865 23468899999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeEE
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYSL 113 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~ 113 (347)
+|+++|++++.+++||+|+++ |+|++|+.
T Consensus 71 ~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~ 150 (373)
T cd08299 71 IVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTV 150 (373)
T ss_pred EEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEE
Confidence 999999999999999999863 68999999
Q ss_pred eeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC
Q 019012 114 IRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 191 (347)
Q Consensus 114 v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~ 191 (347)
+++++ ++++ |++ ++++ ++.+.+++.+||+++...+++++|++|||+| .|++|++++++|+..|+ +|++++++
T Consensus 151 v~~~~-~~~l-P~~---l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~ 224 (373)
T cd08299 151 VDEIA-VAKI-DAA---APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDIN 224 (373)
T ss_pred ecccc-eeeC-CCC---CChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 99998 9999 999 7875 7788889999999987888999999999997 59999999999999999 89999999
Q ss_pred hHhHHHHHHHcCCCeeeecCCH-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhh-hcCCeEEEEcccccccCCCCC
Q 019012 192 SQKVDLLKNKLGFDEAFNYNDE-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNM-RDHGRIAVCGMVSLHSYHDPQ 268 (347)
Q Consensus 192 ~~~~~~~~~~~g~~~vi~~~~~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~ 268 (347)
+++++.++ ++|++++++..+. .++...+++++++++|++|||+|+ ..+..++..+ +++|+++.+|..... ..
T Consensus 225 ~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~ 299 (373)
T cd08299 225 KDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QN 299 (373)
T ss_pred HHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ce
Confidence 99999998 9999999987653 136677777766689999999996 5677777765 579999999975331 01
Q ss_pred CccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 269 GIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
...... .+.++.++.++....+.+ .+.+.++++.+.++.++ +.+..+++++++.++++.+.+++. .|+++++
T Consensus 300 ~~~~~~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 300 LSINPM-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred eecCHH-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 112222 234667888776644321 34566677777766544 345677899999999999887665 4777753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=274.74 Aligned_cols=305 Identities=25% Similarity=0.302 Sum_probs=255.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++..+ +.+. +...+.|.|.+ + +++|+||+.++++|+.|...+.+.+......|.++|+|++| +|
T Consensus 1 ~~~~~~~~~--~~~~-----~~~~~~~~~~~-~--~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G--~v 68 (338)
T cd08254 1 MKAWRFHKG--SKGL-----LVLEEVPVPEP-G--PGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAG--TV 68 (338)
T ss_pred CeeEEEecC--CCCc-----eEEeccCCCCC-C--CCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccE--EE
Confidence 689999887 6551 34456777766 4 99999999999999999988888664344557899999877 99
Q ss_pred EEeccCCCCCCCCCEEEE------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAG------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+.+|++++.+++||+|++ .|+|++|+.++.+. ++++ |++ ++.+ +
T Consensus 69 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~---~~~~~a 143 (338)
T cd08254 69 VEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARA-LVPV-PDG---VPFAQA 143 (338)
T ss_pred EEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHH-eEEC-CCC---CCHHHh
Confidence 999999999999999986 27899999999988 9999 999 7775 7
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
++++.+++|||+++.....++++++|||.| +|++|++++++|+..|++|+++++++++.+.++ ++|++++++.++. .
T Consensus 144 ~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~ 220 (338)
T cd08254 144 AVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-S 220 (338)
T ss_pred hhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-C
Confidence 889999999999998888899999999986 599999999999999999999999999999998 8999888887765 5
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc
Q 019012 216 LVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293 (347)
Q Consensus 216 ~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
....+ +.+.+ ++|+++||+|. ..++.++++|+++|+++.+|..... .......+..++.++.+++...
T Consensus 221 ~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~--- 290 (338)
T cd08254 221 PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK------LTVDLSDLIARELRIIGSFGGT--- 290 (338)
T ss_pred HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC------CccCHHHHhhCccEEEEeccCC---
Confidence 55556 44444 89999999985 5889999999999999999864321 1234456777888888765443
Q ss_pred hhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 294 LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 294 ~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.+++++++++++.+.+. ...++++++.++++.+.+++..+|+|+++
T Consensus 291 --~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 --PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred --HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 5678899999999999876 55679999999999999998889999874
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=271.51 Aligned_cols=307 Identities=21% Similarity=0.285 Sum_probs=248.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++.+... +.+. .+.+ .+.+.|.+ + ++|++||++++++|+.|+....+.+. ....|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~--~~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G--~v 68 (320)
T cd08243 1 MKAIVIEQP--GGPE--VLKL--REIPIPEP-K--PGWVLIRVKAFGLNRSEIFTRQGHSP-SVKFPRVLGIEAVG--EV 68 (320)
T ss_pred CeEEEEcCC--CCcc--ceEE--eecCCCCC-C--CCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCccccceeEE--EE
Confidence 578888776 5442 3444 44565645 4 99999999999999999988877542 23457899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~ 156 (347)
+++|+ ..+++||+|+++ |+|++|+.++++. ++++ |++ ++++ +++++.++.+||+++.....++
T Consensus 69 ~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~ 141 (320)
T cd08243 69 EEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI-DSD---LSWAELAALPETYYTAWGSLFRSLGLQ 141 (320)
T ss_pred EEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHH-cEeC-CCC---CCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 99995 579999999987 7999999999988 9999 998 7775 7899999999999998888899
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++++++. .. ++.+.+++. ++++|++||++|
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~ 217 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVG 217 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCC
Confidence 9999999999999999999999999999999999999999998 8999887765 33 667778777 458999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHH--HhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFT--LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV 314 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~ 314 (347)
+..+..++++++++|+++.+|...... ......... .+.+++++.++..... ..+.+++++++++.+.+++.
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 291 (320)
T cd08243 218 TATLKDSLRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSGDV---PQTPLQELFDFVAAGHLDIP 291 (320)
T ss_pred hHHHHHHHHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchhhh---hHHHHHHHHHHHHCCceecc
Confidence 988999999999999999999753321 011111122 2356777766654321 14578889999999999887
Q ss_pred eecccccccHHHHHHHhhcCcccceEEE
Q 019012 315 EDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 315 ~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
+...+++++++++++.+.+++..+|+++
T Consensus 292 ~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 292 PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 7777899999999999998887778775
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=272.46 Aligned_cols=308 Identities=25% Similarity=0.327 Sum_probs=260.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.. +.++ .+.+. +.+.|.+ + +++++||+.++++|+.|+....|.+......|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~~--~~~~~--~~~~~~~-~--~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v 69 (336)
T cd08276 1 MKAWRLSGG--GGLD--NLKLV--EEPVPEP-G--PGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAG--EV 69 (336)
T ss_pred CeEEEEecc--CCCc--ceEEE--eccCCCC-C--CCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeE--EE
Confidence 789999976 5443 34554 4566655 4 99999999999999999988877654344468899999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCCh
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMP 141 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~ 141 (347)
+++|+++++|++||+|++. |+|++|+.++.+. ++++ |++ +++. ++.++..
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~---~~~~~a~~~~~~ 144 (336)
T cd08276 70 VAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEG-LVRA-PDH---LSFEEAATLPCA 144 (336)
T ss_pred EEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHH-eEEC-CCC---CCHHHhhhhhHH
Confidence 9999999999999999974 5799999999988 9999 998 7774 7788999
Q ss_pred hhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCC-HHHHHHHH
Q 019012 142 GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND-ETDLVAAL 220 (347)
Q Consensus 142 ~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i 220 (347)
+++||+++...+.+++|++++|+| +|++|++++++|+..|++|+++++++++.+.++ ++|.+.+++.+. . ++...+
T Consensus 145 ~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~ 221 (336)
T cd08276 145 GLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEEV 221 (336)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHHH
Confidence 999999998878899999999996 699999999999999999999999999999999 789988888776 4 677788
Q ss_pred HHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHH
Q 019012 221 KRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFL 299 (347)
Q Consensus 221 ~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (347)
++.+++ ++|++||++++.....++++++++|+++.+|..... ........++.+++++.+..... .+.+
T Consensus 222 ~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 291 (336)
T cd08276 222 LKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQF 291 (336)
T ss_pred HHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHHH
Confidence 888886 899999999988899999999999999999975442 11234566778899998877644 5678
Q ss_pred HHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 300 DYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 300 ~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
+++++++.++.+.+.....+++++++++++.+.+++..+|++++
T Consensus 292 ~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 292 EAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 88999999998887766778999999999999988888898875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=274.89 Aligned_cols=304 Identities=20% Similarity=0.166 Sum_probs=249.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + .+.+ .+.|.|++.+ ++||+||+.++++|+.|+..+.|.+.. ..+|.++|||++| +|
T Consensus 1 m~a~~~~~~--~-----~~~~--~~~~~p~~~~--~~ev~v~v~a~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G--~V 66 (345)
T cd08286 1 MKALVYHGP--G-----KISW--EDRPKPTIQE--PTDAIVKMLKTTICGTDLHILKGDVPT-VTPGRILGHEGVG--VV 66 (345)
T ss_pred CceEEEecC--C-----ceeE--EecCCCCCCC--CCeEEEEEEEeeecchhhHHHcCCCCC-CCCCceecccceE--EE
Confidence 688888875 4 2344 5577777645 899999999999999999988886532 3447899999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeecc--ccceecCCCCCCChhh
Q 019012 87 KVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKT--EQLRKIQPDHHIPLSY 133 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~i~p~~~~~~~~ 133 (347)
+++|++++++++||+|+++ |+|++|+.++++ . ++++ |++ ++.
T Consensus 67 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-p~~---~~~ 141 (345)
T cd08286 67 EEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNS-LYKL-PEG---VDE 141 (345)
T ss_pred EEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCc-eEEC-CCC---CCH
Confidence 9999999999999999873 788999999987 6 9999 998 777
Q ss_pred h-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 134 H-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 134 ~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
. ++.++..+++||+++....++.+++++||.|+ |++|++++|+|+..| .+|+++++++++.+.++ ++|++.+++++
T Consensus 142 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~ 219 (345)
T cd08286 142 EAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSA 219 (345)
T ss_pred HHhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccc
Confidence 5 77888999999998777788999999999885 999999999999999 69999988888988888 99999999988
Q ss_pred CHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 212 DETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+. ++...+.+++.+ ++|++|||+|+ ..+..++++++++|+++.+|..... ...+...++.+++++.+....
T Consensus 220 ~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08286 220 KG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP------VDLHLEKLWIKNITITTGLVD 292 (345)
T ss_pred cc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC------CCcCHHHHhhcCcEEEeecCc
Confidence 76 777778887776 89999999985 5788899999999999999864321 233445557788888764332
Q ss_pred cccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCc--ccceEEEEe
Q 019012 290 DYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGK--NVGKQVVRV 344 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~--~~gk~vv~~ 344 (347)
.+.++++.++++++.+++. +..++++++++++++.+.... ...|++|++
T Consensus 293 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 2458889999999998763 456789999999999998753 334888864
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=273.90 Aligned_cols=302 Identities=25% Similarity=0.324 Sum_probs=247.9
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ +++ +.+ .++|.|.+. ++|++||+.++++|+.|+....|.+. ...+|.++|||++| +|
T Consensus 1 m~a~~~~~~--~~~----~~~--~~~~~~~~~---~~~v~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G--~v 66 (334)
T PRK13771 1 MKAVILPGF--KQG----YRI--EEVPDPKPG---KDEVVIKVNYAGLCYRDLLQLQGFYP-RMKYPVILGHEVVG--TV 66 (334)
T ss_pred CeeEEEcCC--CCC----cEE--EeCCCCCCC---CCeEEEEEEEEeechhhHHHhcCCCC-CCCCCeeccccceE--EE
Confidence 689999887 542 344 557888764 99999999999999999987777442 23457889999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+++|++++.+++||+|+++ |+|++|+.++.+. ++++ |++ +++. +
T Consensus 67 ~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~---~~~~~~ 141 (334)
T PRK13771 67 EEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS-LVKV-PPN---VSDEGA 141 (334)
T ss_pred EEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhc-eEEC-CCC---CCHHHh
Confidence 9999999889999999974 6899999999998 9999 998 7764 7
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+.++..+.+||+++... .+++++++||+|++|.+|++++|+|+..|++|+++++++++.+.++ ++ ++++++++ +
T Consensus 142 a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~ 215 (334)
T PRK13771 142 VIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---K 215 (334)
T ss_pred hcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---h
Confidence 88899999999999665 8999999999999999999999999999999999999999999987 77 66666654 3
Q ss_pred HHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchh
Q 019012 216 LVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLY 295 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
+.+.+++. +++|++|||+|+.....++++++++|+++.+|..... ..........+.+++++.+.....
T Consensus 216 ~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----- 284 (334)
T PRK13771 216 FSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHISAT----- 284 (334)
T ss_pred HHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecCCC-----
Confidence 45556654 3699999999998889999999999999999975432 110122333456788887764322
Q ss_pred HHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 296 PRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 296 ~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.+++++++++++.+++.+...+++++++++++.+.+++..+|++++.
T Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 5678999999999999877777889999999999999888888998864
|
|
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=276.23 Aligned_cols=306 Identities=21% Similarity=0.216 Sum_probs=244.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.++ + . ++..++|.|.+.+ ++|++|||.++++|++|++...|.+. ...|.++|||++| +|
T Consensus 1 m~~~~~~~~--~-----~--~~~~~~~~p~~~~--~~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e~~G--~V 65 (375)
T cd08282 1 MKAVVYGGP--G-----N--VAVEDVPDPKIEH--PTDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHEAMG--EV 65 (375)
T ss_pred CceEEEecC--C-----c--eeEEeCCCCCCCC--CCeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccccEE--EE
Confidence 578888654 2 2 3445577776534 89999999999999999998888653 3458999999888 99
Q ss_pred EEeccCCCCCCCCCEEEE----------------------------------------ecCcceeEEeecc--ccceecC
Q 019012 87 KVVDSDNPNFKPGDLVAG----------------------------------------LTGWEEYSLIRKT--EQLRKIQ 124 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~~~~i~ 124 (347)
+++|++++.+++||+|++ .|+|++|+.++.+ . ++++
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~-~~~l- 143 (375)
T cd08282 66 EEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFN-LLKL- 143 (375)
T ss_pred EEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCc-EEEC-
Confidence 999999999999999986 1789999999975 6 9999
Q ss_pred CCCCCChhhh----hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHH
Q 019012 125 PDHHIPLSYH----IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLK 199 (347)
Q Consensus 125 p~~~~~~~~~----~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~ 199 (347)
|++ ++++ ++.++..++|||+++ ..+++++|++|||.| .|++|++++|+|+..|+ +|+++++++++.+.++
T Consensus 144 P~~---~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~ 218 (375)
T cd08282 144 PDR---DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAE 218 (375)
T ss_pred CCC---CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 999 7764 467888999999999 778999999999977 59999999999999998 8999999999999999
Q ss_pred HHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh------------hHHHHHHhhhcCCeEEEEcccccccCCC-
Q 019012 200 NKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE------------MLDAALLNMRDHGRIAVCGMVSLHSYHD- 266 (347)
Q Consensus 200 ~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~- 266 (347)
++|+ ..+++++. ++...+++++++++|++|||+|+. .+..++++++++|+++.+|.........
T Consensus 219 -~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~ 295 (375)
T cd08282 219 -SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAG 295 (375)
T ss_pred -HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccc
Confidence 9998 45777765 777788887766799999999875 4889999999999999887643211100
Q ss_pred ------CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccc
Q 019012 267 ------PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVG 338 (347)
Q Consensus 267 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~g 338 (347)
.........++.++..+.+.... ..+.+++++++++++.+++. +...+++++++++++.+.+++ .+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~ 369 (375)
T cd08282 296 DAAAKQGELSFDFGLLWAKGLSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET 369 (375)
T ss_pred cccccCccccccHHHHHhcCcEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce
Confidence 01122344555566655554322 25678889999999999873 677889999999999999888 78
Q ss_pred eEEEE
Q 019012 339 KQVVR 343 (347)
Q Consensus 339 k~vv~ 343 (347)
|+|++
T Consensus 370 kvvv~ 374 (375)
T cd08282 370 KVVIK 374 (375)
T ss_pred EEEeC
Confidence 98875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=273.93 Aligned_cols=301 Identities=20% Similarity=0.234 Sum_probs=242.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--------CCCCCCCCCC
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--------SYIPPFVPGQ 78 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--------~~~~p~i~G~ 78 (347)
|||+++.++ + .+++ .+.|.|.+. +++|+||+.++++|+.|+..+.|.+.. ...+|.++||
T Consensus 1 mka~~~~~~--~-----~~~~--~~~~~p~~~---~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~ 68 (350)
T cd08256 1 MRAVVCHGP--Q-----DYRL--EEVPVPRPG---PGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGH 68 (350)
T ss_pred CeeEEEecC--C-----ceEE--EECCCCCCC---CCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCc
Confidence 689999765 3 3455 457777664 999999999999999999888775310 0135778999
Q ss_pred ceecceEEEEeccCCC--CCCCCCEEEE---------------------------e-----cCcceeEEeeccccceecC
Q 019012 79 PVEGFGVSKVVDSDNP--NFKPGDLVAG---------------------------L-----TGWEEYSLIRKTEQLRKIQ 124 (347)
Q Consensus 79 e~~G~g~v~~vg~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~~~~~~i~ 124 (347)
|++| +|+++|++++ +|++||+|++ + |+|++|+.++++..++++
T Consensus 69 e~~G--~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l- 145 (350)
T cd08256 69 EFVG--RVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV- 145 (350)
T ss_pred ceeE--EEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-
Confidence 9887 9999999999 8999999986 3 799999999988537899
Q ss_pred CCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc
Q 019012 125 PDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL 202 (347)
Q Consensus 125 p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~ 202 (347)
|++ ++++ ++.+ .+++++|+++ +.++++++++|||.| +|++|++++++|+.+|+ .++++++++++.+.++ ++
T Consensus 146 P~~---~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~ 218 (350)
T cd08256 146 PDD---IPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KF 218 (350)
T ss_pred CCC---CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-Hc
Confidence 998 7775 5555 8999999998 778999999999955 69999999999999998 5778888888888888 99
Q ss_pred CCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHH-hhc
Q 019012 203 GFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTL-VTK 279 (347)
Q Consensus 203 g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~ 279 (347)
|++.++++++. ++.+.+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|..... .......+ ..+
T Consensus 219 g~~~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~ 291 (350)
T cd08256 219 GADVVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRK 291 (350)
T ss_pred CCcEEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhhccc
Confidence 99889988765 777888888877 89999999995 5788999999999999999864321 11222222 345
Q ss_pred ceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEE
Q 019012 280 RITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
++++.++.... ..++++++++++|.+++. +...++++++++|++.+.+++..+|+++
T Consensus 292 ~~~i~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 292 ELDVLGSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred ccEEEEeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 66666655432 357889999999999874 5677899999999999998887778774
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=274.93 Aligned_cols=306 Identities=23% Similarity=0.316 Sum_probs=250.7
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ |.+ +++ .++|.|.+. +++|+||+.++++|+.|+..+.+.+. ..+|.++|+|++| +|
T Consensus 1 m~a~~~~~~--~~~----~~~--~~~~~p~~~---~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G--~V 65 (363)
T cd08279 1 MRAAVLHEV--GKP----LEI--EEVELDDPG---PGEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHEGAG--VV 65 (363)
T ss_pred CeEEEEecC--CCC----ceE--EEeeCCCCC---CCeEEEEEEEeecCcHHHHHhcCCCC--CCCCccccccceE--EE
Confidence 689999987 543 344 446777664 99999999999999999988887553 3457899999888 99
Q ss_pred EEeccCCCCCCCCCEEEE--------------------------------------------------ecCcceeEEeec
Q 019012 87 KVVDSDNPNFKPGDLVAG--------------------------------------------------LTGWEEYSLIRK 116 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~--------------------------------------------------~g~~~~~~~v~~ 116 (347)
+.+|++++.|++||+|++ .|+|++|+.+++
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 145 (363)
T cd08279 66 EEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPE 145 (363)
T ss_pred EEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEecc
Confidence 999999999999999987 278999999999
Q ss_pred cccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHh
Q 019012 117 TEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQK 194 (347)
Q Consensus 117 ~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~ 194 (347)
+. ++++ |++ ++++ ++.++..+.+||+++....++.++++|||+| .|++|++++++|+..|++ |+++++++++
T Consensus 146 ~~-~~~l-p~~---~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~ 219 (363)
T cd08279 146 AS-VVKI-DDD---IPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEK 219 (363)
T ss_pred cc-EEEC-CCC---CChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHH
Confidence 98 9999 999 7775 7788889999999998888999999999996 599999999999999995 9999999999
Q ss_pred HHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccc
Q 019012 195 VDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN 272 (347)
Q Consensus 195 ~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 272 (347)
.+.++ ++|++++++++.. ++...+++++.+ ++|++||++++ ..+..++++++++|+++.++..... ......
T Consensus 220 ~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~ 293 (363)
T cd08279 220 LELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLP 293 (363)
T ss_pred HHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccC
Confidence 99888 9999999998876 778888888765 89999999994 6889999999999999999865421 112334
Q ss_pred hHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEE
Q 019012 273 LFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQV 341 (347)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~v 341 (347)
...+..++..+.++.... ....+.+++++++++++.+++. +...++++++.++++.+.+++..+.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 294 ALELFLSEKRLQGSLYGS--ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHhhcCcEEEEEEecC--cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 445555666666654422 1225678999999999998863 566789999999999998887653333
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=270.96 Aligned_cols=301 Identities=22% Similarity=0.247 Sum_probs=247.5
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.+ + .+. ..++|.|.+. ++|++|||.++++|+.|+....+.+.. ...|.++|+|++| +|
T Consensus 1 ~~a~~~~~~--~-----~~~--~~~~~~~~~~---~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~~~~~~g~e~~G--~V 65 (337)
T cd08261 1 MKALVCEKP--G-----RLE--VVDIPEPVPG---AGEVLVRVKRVGICGSDLHIYHGRNPF-ASYPRILGHELSG--EV 65 (337)
T ss_pred CeEEEEeCC--C-----ceE--EEECCCCCCC---CCeEEEEEEEEeEcccChHHHcCCCCc-CCCCcccccccEE--EE
Confidence 688888764 3 234 4557777664 999999999999999999888775432 2447889999888 99
Q ss_pred EEeccCCCCCCCCCEEEE------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAG------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+.+|++++.|++||+|++ .|+|++|+.++++ ++++ |++ ++++ +
T Consensus 66 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~-p~~---~~~~~a 139 (337)
T cd08261 66 VEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD--ALLV-PEG---LSLDQA 139 (337)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh--eEEC-CCC---CCHHHh
Confidence 999999999999999986 3789999999987 8899 999 7875 4
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+++ ..++++++++ ...++.++++|||+| +|.+|++++|+|+.+|++|+++.+++++.+.++ ++|+++++++++. +
T Consensus 140 a~~-~~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~ 214 (337)
T cd08261 140 ALV-EPLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-D 214 (337)
T ss_pred hhh-chHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-C
Confidence 444 6788999988 778999999999997 599999999999999999999988999999998 8999999999886 7
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc
Q 019012 216 LVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293 (347)
Q Consensus 216 ~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
+.+.+++.+++ ++|++||++|+ ..+..++++|+++|+++.++..... .......+..+++++.+...
T Consensus 215 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~------~~~~~~~~~~~~~~~~~~~~----- 283 (337)
T cd08261 215 VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP------VTFPDPEFHKKELTILGSRN----- 283 (337)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC------CccCHHHHHhCCCEEEEecc-----
Confidence 88888888776 89999999986 6789999999999999999865421 12223345566777666532
Q ss_pred hhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCc-ccceEEEEe
Q 019012 294 LYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGK-NVGKQVVRV 344 (347)
Q Consensus 294 ~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~ 344 (347)
...+.++++++++.+|.+++ .+...+++++++++++.+.+++ ..+|+|+++
T Consensus 284 ~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 284 ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 23567889999999999987 6677789999999999999884 668998864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=272.56 Aligned_cols=305 Identities=21% Similarity=0.236 Sum_probs=243.8
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--CCCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--SSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--~~~~~p~i~G~e~~G~g 84 (347)
||+++++++ ++ .+.+ .++|.|.+. ++||+||+.++++|++|+.++.+... +...+|.++|||++|
T Consensus 1 ~~~~~~~~~--~~----~~~~--~~~~~p~~~---~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G-- 67 (341)
T PRK05396 1 MKALVKLKA--EP----GLWL--TDVPVPEPG---PNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVG-- 67 (341)
T ss_pred CceEEEecC--CC----ceEE--EECCCCCCC---CCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEE--
Confidence 589999886 42 2344 456777664 99999999999999999987655321 123467899999887
Q ss_pred EEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
+|+++|++++++++||+|++. |+|++|+.++++. ++++ |++ ++++
T Consensus 68 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-P~~---l~~~ 142 (341)
T PRK05396 68 EVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFN-VWKI-PDD---IPDD 142 (341)
T ss_pred EEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHH-eEEC-cCC---CCHH
Confidence 999999999999999999973 7999999999988 9999 999 7776
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
.+++..++.++++++.. ...+|++|+|.| .|++|++++|+|+.+|+ +|++++.++++.+.++ ++|+++++++++.
T Consensus 143 ~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~ 218 (341)
T PRK05396 143 LAAIFDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE 218 (341)
T ss_pred HhHhhhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc
Confidence 44456777777776643 346899999987 59999999999999999 6888888888888888 8999999998876
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
++.+.+++++.+ ++|++|||.|+ ..+..++++++++|+++.+|..... .......+..+++++.++....
T Consensus 219 -~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~- 290 (341)
T PRK05396 219 -DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVIFKGLTIKGIYGRE- 290 (341)
T ss_pred -cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHhhcceEEEEEEccC-
Confidence 788888888876 89999999886 5789999999999999999875421 1223467777888887764322
Q ss_pred cchhHHHHHHHHHHHHCC-ceeeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 292 LHLYPRFLDYVISNYKQG-KIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g-~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
..+.+..+++++.++ .+.+.+...+++++++++++.+.+++ .||++++++
T Consensus 291 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 291 ---MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred ---ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 234566788889888 45555667789999999999998877 789999764
|
|
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=274.20 Aligned_cols=305 Identities=21% Similarity=0.283 Sum_probs=245.8
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
||+++.+. +. +++++ ++|.|.+. +++|+||+.++++|+.|++.+.+.+. ..+|.++|||++| +|+
T Consensus 2 ~a~~~~~~--~~----~~~~~--~~~~p~~~---~~~vlv~v~~~~i~~~d~~~~~g~~~--~~~~~i~g~e~~G--~V~ 66 (365)
T cd05279 2 KAAVLWEK--GK----PLSIE--EIEVAPPK---AGEVRIKVVATGVCHTDLHVIDGKLP--TPLPVILGHEGAG--IVE 66 (365)
T ss_pred ceeEEecC--CC----CcEEE--EeecCCCC---CCeEEEEEEEeeecchhHHHhcCCCC--CCCCcccccceeE--EEE
Confidence 67888875 32 34565 46667664 99999999999999999988887542 3467899999888 999
Q ss_pred EeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeEEeec
Q 019012 88 VVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYSLIRK 116 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~ 116 (347)
++|++++++++||+|+++ |+|++|+.+++
T Consensus 67 ~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 146 (365)
T cd05279 67 SIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSE 146 (365)
T ss_pred EeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecC
Confidence 999999999999999864 58999999999
Q ss_pred cccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHh
Q 019012 117 TEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQK 194 (347)
Q Consensus 117 ~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~ 194 (347)
+. ++++ |++ ++++ ++.+..++.+||+++...+++.+|++|||+| .|++|++++++|+..|++ |+++++++++
T Consensus 147 ~~-~~~l-P~~---~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~ 220 (365)
T cd05279 147 IS-LAKI-DPD---APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDK 220 (365)
T ss_pred Cc-eEEC-CCC---CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 88 9999 999 7875 7788889999999988888999999999997 599999999999999995 7788879999
Q ss_pred HHHHHHHcCCCeeeecCCHH-HHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhh-cCCeEEEEcccccccCCCCCCcc
Q 019012 195 VDLLKNKLGFDEAFNYNDET-DLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMR-DHGRIAVCGMVSLHSYHDPQGIH 271 (347)
Q Consensus 195 ~~~~~~~~g~~~vi~~~~~~-~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~ 271 (347)
.+.++ ++|++++++.++.+ ++.+.+++.+++++|++||++|. ..+..++++++ ++|+++.+|..... .....
T Consensus 221 ~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~ 295 (365)
T cd05279 221 FEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG----TEATL 295 (365)
T ss_pred HHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC----Cceee
Confidence 99998 99999888876531 45667777775689999999985 78899999999 99999999864311 11233
Q ss_pred chHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEE
Q 019012 272 NLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
+...+ .++.++.|+....+. ..+.+++++++++++.+++. +..+++++++.+|++.+.+++.. |+++
T Consensus 296 ~~~~~-~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 296 DPNDL-LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CHHHH-hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 34444 567777776543322 25678889999999998863 66677999999999998876654 6655
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=272.39 Aligned_cols=301 Identities=24% Similarity=0.264 Sum_probs=246.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++..+ + .+.+ +++|.|.+.+ ++||+||+.++++|+.|+..+.|.+. ..+|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~-----~~~~--~~~~~p~~~~--~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G--~V 65 (344)
T cd08284 1 MKAVVFKGP--G-----DVRV--EEVPIPQIQD--PTDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHEFVG--EV 65 (344)
T ss_pred CeeEEEecC--C-----CceE--EeccCCCCCC--CCeEEEEEEEeeccccchhhhcCCCC--CCCCcccccceEE--EE
Confidence 578888764 2 3455 4466666534 89999999999999999988877553 3457899999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe----------------------------------cCcceeEEeecc--ccceecCCCCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL----------------------------------TGWEEYSLIRKT--EQLRKIQPDHHIP 130 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~i~p~~~~~ 130 (347)
+.+|++++.+++||+|++. |+|++|+.++++ . ++++ |++
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~~-p~~--- 140 (344)
T cd08284 66 VEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKL-PDG--- 140 (344)
T ss_pred EeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCc-eEEC-CCC---
Confidence 9999999999999999972 789999999964 6 9999 999
Q ss_pred hhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeee
Q 019012 131 LSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAF 208 (347)
Q Consensus 131 ~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi 208 (347)
++++ +++++..++|||+++. ..++.++++|||+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|+. .+
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~ 216 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PI 216 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EE
Confidence 7775 7889999999999995 48889999999997 69999999999999997 8999988888888888 89975 56
Q ss_pred ecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecc
Q 019012 209 NYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286 (347)
Q Consensus 209 ~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
+.+.. ++...+.+.+++ ++|++||++++ ..+..++++++++|+++.+|..... .........+.+++++.+.
T Consensus 217 ~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~ 290 (344)
T cd08284 217 NFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFG 290 (344)
T ss_pred ecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEe
Confidence 76664 677788888776 89999999995 6889999999999999999976532 1123345567778877654
Q ss_pred ccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 287 LQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.. ...+.++++++++.++.+++ .+..++++++++++++.+.+++. +|+|++
T Consensus 291 ~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 291 RC-----PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred cC-----CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 22 12567899999999999876 35667799999999999988777 898875
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=268.00 Aligned_cols=313 Identities=28% Similarity=0.398 Sum_probs=258.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.++ +.+. .+.+. +.+.|.+ . +++++||+.++++|+.|+....+.+......|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~~--~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v 69 (323)
T cd05276 1 MKAIVIKEP--GGPE--VLELG--EVPKPAP-G--PGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAG--VV 69 (323)
T ss_pred CeEEEEecC--CCcc--cceEE--ecCCCCC-C--CCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEE--EE
Confidence 689999887 6553 34454 4555544 4 99999999999999999988777554334457899999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+.+|++++.+++||+|+++ |+|++|+.++.+. ++++ |++ +++. +++++.++.++++++.+...+.++++++
T Consensus 70 ~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~---~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vl 144 (323)
T cd05276 70 VAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQ-LLPV-PEG---LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVL 144 (323)
T ss_pred EeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHH-hccC-CCC---CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEE
Confidence 9999999999999999997 7999999999988 9999 998 7774 7789999999999998878899999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLD 241 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~ 241 (347)
|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++...+.+.+.+ ++|++||+.|+....
T Consensus 145 v~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~ 222 (323)
T cd05276 145 IHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLA 222 (323)
T ss_pred EEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHH
Confidence 9999999999999999999999999999999999998 8998888888876 777788877766 899999999988888
Q ss_pred HHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHHHCCceeeeee
Q 019012 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
.++++++++|+++.++...... .......++.+++++.++..... +....+.++++++++.++.+.+...
T Consensus 223 ~~~~~~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (323)
T cd05276 223 RNLRALAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVID 297 (323)
T ss_pred HHHHhhccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcc
Confidence 9999999999999998654321 12233445567888887765432 2223456788889999999987777
Q ss_pred cccccccHHHHHHHhhcCcccceEEE
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
..+++++++++++.+.++...+|+++
T Consensus 298 ~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 298 KVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred eEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 77899999999999998877778764
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=267.90 Aligned_cols=314 Identities=27% Similarity=0.403 Sum_probs=260.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++..+ +.+. .+.+ .++|.|.+ . +++++|++.++++|+.|...+.|.+......|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~--~~~~~~~l-~--~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v 69 (325)
T cd08253 1 MRAIRYHEF--GAPD--VLRL--GDLPVPTP-G--PGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAG--VV 69 (325)
T ss_pred CceEEEccc--CCcc--ccee--eecCCCCC-C--CCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEE--EE
Confidence 578888876 5542 3344 56777765 4 99999999999999999988877554344568899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe--------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL--------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+++|++++.|++||+|+++ |++++|+.++.+. ++++ |++ ++++ ++++++++.+||+++....++.+
T Consensus 70 ~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~---~~~~~aa~~~~~~~~a~~~l~~~~~~~~ 144 (325)
T cd08253 70 EAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQ-LVPL-PDG---VSFEQGAALGIPALTAYRALFHRAGAKA 144 (325)
T ss_pred EeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHH-cEeC-CCC---CCHHHHhhhhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999985 6899999999988 9999 998 7775 78899999999999988789999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
|++++|+|+++++|++++++++..|++|+++++++++.+.+. ++|++.+++.... ++...+++.+.+ ++|+++|+++
T Consensus 145 g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~ 222 (325)
T cd08253 145 GETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLA 222 (325)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCc
Confidence 999999999999999999999999999999999999999998 8999888888776 777778877766 8999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVE 315 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~ 315 (347)
+......+++++++|+++.++..... .......++.++.++.+...... +....+.++.+.+++..+.+++..
T Consensus 223 ~~~~~~~~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 296 (325)
T cd08253 223 NVNLAKDLDVLAPGGRIVVYGSGGLR------GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVI 296 (325)
T ss_pred hHHHHHHHHhhCCCCEEEEEeecCCc------CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCcc
Confidence 88888999999999999999875311 12233345667777766654322 344456788888899999888877
Q ss_pred ecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 316 DMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 316 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
...+++++++++++.+.++...+|+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 297 AREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred ccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 77789999999999999888888998863
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=272.02 Aligned_cols=302 Identities=21% Similarity=0.218 Sum_probs=239.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC----------CCCCCCCCC
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT----------SSYIPPFVP 76 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~----------~~~~~p~i~ 76 (347)
|||+++... .+.+ ++.|.|.+. +++|+|||.++++|+.|+....|... ....+|.++
T Consensus 1 m~a~~~~~~--------~~~~--~~~~~p~~~---~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 67 (341)
T cd08262 1 MRAAVFRDG--------PLVV--RDVPDPEPG---PGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVL 67 (341)
T ss_pred CceEEEeCC--------ceEE--EecCCCCCC---CCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCccc
Confidence 588888752 2344 457777664 99999999999999999988877321 022347889
Q ss_pred CCceecceEEEEeccCCCC-CCCCCEEEEe--------------------cCcceeEEeeccccceecCCCCCCChhhhh
Q 019012 77 GQPVEGFGVSKVVDSDNPN-FKPGDLVAGL--------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHI 135 (347)
Q Consensus 77 G~e~~G~g~v~~vg~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~ 135 (347)
|+|++| +|+++|+++++ |++||+|+++ |+|++|+.++++. ++++ |++ ++++.
T Consensus 68 g~e~~G--~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~---~s~~~ 140 (341)
T cd08262 68 GHEFCG--EVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEAL-LLRV-PDG---LSMED 140 (341)
T ss_pred ccceeE--EEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHH-eEEC-CCC---CCHHH
Confidence 999887 99999999987 9999999985 7999999999988 9999 999 78765
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
++++.++++||+++ ..++++++++|||+|+ |++|.+++|+|+.+|++ +++++.++++.+.++ ++|++++++++..
T Consensus 141 a~~~~~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~- 216 (341)
T cd08262 141 AALTEPLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD- 216 (341)
T ss_pred hhhhhhHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-
Confidence 55778899999996 7789999999999975 99999999999999995 777777888889888 8999888987653
Q ss_pred HHHH---HHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 215 DLVA---ALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 215 ~~~~---~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+... .+.+.+.+ ++|++||++|+ ..+..++++++++|+++.+|..... . .........+++++.+....
T Consensus 217 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd08262 217 SPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES----D--NIEPALAIRKELTLQFSLGY 290 (341)
T ss_pred CHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----C--ccCHHHHhhcceEEEEEecc
Confidence 2211 34444555 89999999997 4788999999999999999875321 1 11112224567777654433
Q ss_pred cccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 290 DYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
. .+.++++++++++|.+.+. +...+++++++++++.+.+++..+|+|++
T Consensus 291 ~-----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 291 T-----PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred c-----HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 2 4578899999999999864 35677999999999999998888898863
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=270.43 Aligned_cols=306 Identities=25% Similarity=0.347 Sum_probs=247.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++++. + .+.+ .+.|.|.+ . ++||+||+.++++|+.|+..+.+.+ ...+|.++|+|++| +|
T Consensus 1 ~~a~~~~~~--~-----~l~~--~~~~~~~l-~--~~~v~v~v~~~~~n~~d~~~~~~~~--~~~~~~~~g~~~~G--~V 64 (343)
T cd08236 1 MKALVLTGP--G-----DLRY--EDIPKPEP-G--PGEVLVKVKACGICGSDIPRYLGTG--AYHPPLVLGHEFSG--TV 64 (343)
T ss_pred CeeEEEecC--C-----ceeE--EecCCCCC-C--CCeEEEEEEEEEECccchHhhcCCC--CCCCCcccCcceEE--EE
Confidence 689999886 3 2344 45666755 4 9999999999999999998877754 23457899999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+.+|++++.|++||+|+++ |+|++|+.++++. ++++ |++ ++++ +
T Consensus 65 ~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-P~~---~~~~~a 139 (343)
T cd08236 65 EEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARN-LIKI-PDH---VDYEEA 139 (343)
T ss_pred EEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHH-eEEC-cCC---CCHHHH
Confidence 9999999999999999984 7999999999998 9999 999 7875 4
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
+.+ ..+++||+++. ...++++++|||+| +|.+|++++|+|+.+|++ |+++++++++.+.++ ++|++.+++++..
T Consensus 140 a~~-~~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~- 214 (343)
T cd08236 140 AMI-EPAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE- 214 (343)
T ss_pred Hhc-chHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-
Confidence 555 68899999995 78899999999997 599999999999999996 999999999889888 8999899998876
Q ss_pred HHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 215 DLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 215 ~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
. ..++++..++ ++|++|||+|+ ..+..++++|+++|+++.+|..... ..........++.++.++.++......
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeecccc
Confidence 6 7777777776 79999999985 5789999999999999999865421 011122344556788888887654332
Q ss_pred chhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhc-CcccceEEE
Q 019012 293 HLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFS-GKNVGKQVV 342 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~-~~~~gk~vv 342 (347)
....+.++++++++.++.+. +.+...+++++++++++.+.+ +...+|+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 23356788899999999886 345567799999999999998 556677764
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=269.63 Aligned_cols=312 Identities=22% Similarity=0.196 Sum_probs=251.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ +++. ....+...++|.|.+. +++|+||+.++++|+.|+..+.+.+. ....|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~---~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G--~v 71 (336)
T cd08252 1 MKAIGFTQP--LPIT-DPDSLIDIELPKPVPG---GRDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWDASG--VV 71 (336)
T ss_pred CceEEecCC--CCCC-cccceeEccCCCCCCC---CCEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccceEE--EE
Confidence 579999998 7663 1112445567777664 89999999999999999988776442 23457799999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC--
Q 019012 87 KVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS-- 157 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~-- 157 (347)
+.+|++++.|++||+|+++ |+|++|+.++.+. ++++ |++ ++++ ++.++..+.+||+++.+.+.+.+
T Consensus 72 ~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~ 146 (336)
T cd08252 72 EAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERI-VGHK-PKS---LSFAEAAALPLTSLTAWEALFDRLGISEDA 146 (336)
T ss_pred EEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHH-eeeC-CCC---CCHHHhhhhhhHHHHHHHHHHHhcCCCCCc
Confidence 9999999999999999986 7899999999988 9999 998 7775 77889999999999878788887
Q ss_pred ---CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 158 ---GEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 158 ---~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
+++|+|+|+.|++|++++++|+..| ++|+++++++++.+.++ ++|++++++++. ++.+.++...++++|++||
T Consensus 147 ~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~ 223 (336)
T cd08252 147 ENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFC 223 (336)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEE
Confidence 9999999999999999999999999 89999999999999998 899988888774 5566666544348999999
Q ss_pred CCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cc--hhHHHHHHHHHH
Q 019012 234 NVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LH--LYPRFLDYVISN 305 (347)
Q Consensus 234 ~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~ 305 (347)
++|+ ..+..++++++++|+++.+|.... ......+..+++++.+...... +. ...+.+++++++
T Consensus 224 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (336)
T cd08252 224 LTDTDQHWDAMAELIAPQGHICLIVDPQE--------PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADL 295 (336)
T ss_pred ccCcHHHHHHHHHHhcCCCEEEEecCCCC--------cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHH
Confidence 9995 689999999999999999986421 2223334467777776544321 11 334678899999
Q ss_pred HHCCceeeeeec---ccccccHHHHHHHhhcCcccceEEEE
Q 019012 306 YKQGKIVYVEDM---NEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 306 l~~g~i~~~~~~---~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
+.+|.+++.+.. .+++++++++++.+.+++..+|++++
T Consensus 296 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 296 LDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 999999875432 35999999999999998888888763
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=270.13 Aligned_cols=304 Identities=26% Similarity=0.309 Sum_probs=246.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ + .+.++ +.+.|.+ . +++|+||++++++|+.|+..+.+.+. ...+|.++|+|++| +|
T Consensus 1 ~~~~~~~~~--~-----~~~~~--~~~~~~l-~--~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G--~V 65 (343)
T cd08235 1 MKAAVLHGP--N-----DVRLE--EVPVPEP-G--PGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAG--EI 65 (343)
T ss_pred CeEEEEecC--C-----ceEEE--EccCCCC-C--CCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEE--EE
Confidence 589999876 4 24554 4666645 4 99999999999999999988877543 23457899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccc----cceecCCCCCCChh
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTE----QLRKIQPDHHIPLS 132 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~----~~~~i~p~~~~~~~ 132 (347)
+++|++++.|++||+|+++ |+|++|+.++++. .++++ |++ ++
T Consensus 66 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~~---~~ 141 (343)
T cd08235 66 VEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PDN---VS 141 (343)
T ss_pred EeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CCC---CC
Confidence 9999999999999999974 7899999999752 27899 999 77
Q ss_pred hhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 133 YHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 133 ~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
+..|++..++.+||+++.. .++++|++|||+| +|++|++++|+|+..|++ |++++.++++.+.++ ++|++++++++
T Consensus 142 ~~~aa~~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~ 218 (343)
T cd08235 142 FEEAALVEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAA 218 (343)
T ss_pred HHHHHhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCC
Confidence 7644444788999999954 5899999999997 599999999999999998 999988999989988 89999999988
Q ss_pred CHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 212 DETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+. ++.+.+++.+.+ ++|++|||+++ ..+..++++++++|+++.++..... ............+++++.++...
T Consensus 219 ~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~ 293 (343)
T cd08235 219 EE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITITGSYAA 293 (343)
T ss_pred cc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEEEEEecC
Confidence 86 788888888776 89999999996 4889999999999999999864332 11223345566677777665543
Q ss_pred cccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 290 DYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
. .+.+++++++++++.+.+ .+...++++++.++++.+.+++ .+|+|++
T Consensus 294 ~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 294 S-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 3 456888999999999863 3556779999999999999988 8898874
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=267.46 Aligned_cols=309 Identities=27% Similarity=0.361 Sum_probs=256.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++... +.+. .+.+.. .+.|.+ . +++|+||+.++++|+.|+..+.|.+......|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~~--~~~~~~--~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v 69 (342)
T cd08266 1 MKAVVIRGH--GGPE--VLEYGD--LPEPEP-G--PDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAG--VV 69 (342)
T ss_pred CeEEEEecC--CCcc--ceeEee--cCCCCC-C--CCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEE--EE
Confidence 588888865 5443 445544 555645 4 99999999999999999988877543333457899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+.+|++++.|++||+|+++ |+|++|+.++.+. ++++ |++ ++++ +
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~-p~~---~~~~~a 144 (342)
T cd08266 70 EAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARN-LLPI-PDN---LSFEEA 144 (342)
T ss_pred EEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHH-ceeC-CCC---CCHHHH
Confidence 9999999999999999874 6799999999988 9999 998 7774 7
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+.++..+.+|++++.+..++.+++++||+|+++++|++++++++..|++|+++++++++.+.++ .++.+.+++.... +
T Consensus 145 ~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~ 222 (342)
T cd08266 145 AAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-D 222 (342)
T ss_pred HhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-H
Confidence 7888889999999888889999999999999889999999999999999999999999989888 8888778887765 6
Q ss_pred HHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccch
Q 019012 216 LVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL 294 (347)
Q Consensus 216 ~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
....+.+.+.+ ++|+++++.|+..+..++++++++|+++.++..... .........+.+++++.+.....
T Consensus 223 ~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---- 293 (342)
T cd08266 223 FVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT---- 293 (342)
T ss_pred HHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC----
Confidence 77777777665 899999999998899999999999999999865432 11233335567788888776544
Q ss_pred hHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 295 YPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
...+.++++++.++.+.+.+...+++++++++++.+.++...+|++++
T Consensus 294 -~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 294 -KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred -HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 557888999999999988777788999999999999888777899886
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=269.62 Aligned_cols=297 Identities=21% Similarity=0.215 Sum_probs=245.4
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
|+++.+.. + .++.+ .++|.|.+. ++|++||+.++++|+.|+..+.+.+. ....|.++|||++| +|+
T Consensus 1 ~~~~~~~~--~----~~~~~--~~~~~p~~~---~~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G--~V~ 66 (337)
T cd05283 1 KGYAARDA--S----GKLEP--FTFERRPLG---PDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVG--IVV 66 (337)
T ss_pred CceEEecC--C----CCceE--EeccCCCCC---CCeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcceee--EEE
Confidence 45666665 3 24455 446777664 99999999999999999988887652 23458899999888 999
Q ss_pred EeccCCCCCCCCCEEEE--------------------------------------ecCcceeEEeeccccceecCCCCCC
Q 019012 88 VVDSDNPNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLRKIQPDHHI 129 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~ 129 (347)
++|+++++|++||+|+. .|+|++|+.++++. ++++ |++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~-- 142 (337)
T cd05283 67 AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF-VFKI-PEG-- 142 (337)
T ss_pred EECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh-eEEC-CCC--
Confidence 99999999999999972 27899999999998 9999 999
Q ss_pred Chhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee
Q 019012 130 PLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF 208 (347)
Q Consensus 130 ~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi 208 (347)
++++ ++.++..+.+||+++.. ..+++|++++|.| .|++|++++++|+..|++|+++++++++.++++ ++|++.++
T Consensus 143 -~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi 218 (337)
T cd05283 143 -LDSAAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFI 218 (337)
T ss_pred -CCHHHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEe
Confidence 7775 77889999999999855 5689999999977 599999999999999999999999999999998 89998888
Q ss_pred ecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 209 NYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 209 ~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
+.+.. ++.. . ..+++|++|||+++. ....++++++++|+++.+|..... ...+...++.+++++.++.
T Consensus 219 ~~~~~-~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~ 287 (337)
T cd05283 219 ATKDP-EAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSL 287 (337)
T ss_pred cCcch-hhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEec
Confidence 87764 4322 1 234799999999986 589999999999999999875432 1334456677899999877
Q ss_pred cccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
... .+.++++++++.++.+++.+ ..++++++++||+.+.+++..||+|++
T Consensus 288 ~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 288 IGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 654 56789999999999988764 567999999999999999888898874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=265.60 Aligned_cols=310 Identities=21% Similarity=0.260 Sum_probs=246.7
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ |+++ ++.+ +++|.|.+. +++|+||+.++++|+.|...+.+.+.....+|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~~--~~~~--~~~~~p~~~---~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~V 69 (324)
T cd08288 1 FKALVLEKD--DGGT--SAEL--RELDESDLP---EGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAG--TV 69 (324)
T ss_pred CeeEEEecc--CCCc--ceEE--EECCCCCCC---CCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEE--EE
Confidence 789999987 7664 3445 457777664 99999999999999999988777543223457889999888 77
Q ss_pred EEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHh--hcC
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHE--VCS 154 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~--~~~ 154 (347)
+. ++++++++||+|+++ |+|++|+.++.+. ++++ |++ ++++ ++.++..+++|++++.. ...
T Consensus 70 ~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~---~~~~~~~~~~~~~~ta~~~~~~~~~~~ 142 (324)
T cd08288 70 VE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADW-LVPL-PEG---LSARQAMAIGTAGFTAMLCVMALEDHG 142 (324)
T ss_pred Ee--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHH-eeeC-CCC---CCHHHHhhhhhHHHHHHHHHHHHhhcC
Confidence 77 777889999999984 7999999999998 9999 999 7775 78889899999877641 234
Q ss_pred CC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 155 PK-SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 155 ~~-~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.. +++++||+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++++. + ..++..+.+++|.++|
T Consensus 143 ~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~~~~d 218 (324)
T cd08288 143 VTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWAGAVD 218 (324)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCcccEEEE
Confidence 45 6789999999999999999999999999999999999999998 9999999988753 2 3566666557899999
Q ss_pred CCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCcee
Q 019012 234 NVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~ 312 (347)
++++..+...+..++.+|+++.+|..... . .......++.+++++.+...... .....+.++.+.+++..+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~g~~~~~G~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (324)
T cd08288 219 TVGGHTLANVLAQTRYGGAVAACGLAGGA----D-LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLE 293 (324)
T ss_pred CCcHHHHHHHHHHhcCCCEEEEEEecCCC----C-CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcc
Confidence 99987788888999999999999875321 1 11233344478888888654322 223456788888899899887
Q ss_pred eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 313 YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 313 ~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+ +...+++++++++++.+.+++..+|+++++
T Consensus 294 ~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 294 A-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred c-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 6 456779999999999999999889999864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=265.06 Aligned_cols=301 Identities=27% Similarity=0.326 Sum_probs=245.5
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++..+ ++ .+.+ .+.|.|.+. +++|+||++++++|+.|+....|.+. ....|.++|||++| +|
T Consensus 1 m~a~~~~~~--~~----~~~~--~~~~~p~~~---~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G--~v 66 (332)
T cd08259 1 MKAAILHKP--NK----PLQI--EEVPDPEPG---PGEVLIKVKAAGVCYRDLLFWKGFFP-RGKYPLILGHEIVG--TV 66 (332)
T ss_pred CeEEEEecC--CC----ceEE--EEccCCCCC---CCeEEEEEEEEecchhhhHHhcCCCC-CCCCCeeccccceE--EE
Confidence 588998763 22 2344 457778664 99999999999999999988877543 23457899999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+.+|+++++|++||+|+++ |+|++|+.++.+. ++++ |++ ++++ +
T Consensus 67 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~~ 141 (332)
T cd08259 67 EEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERS-LVKL-PDN---VSDESA 141 (332)
T ss_pred EEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhh-eEEC-CCC---CCHHHH
Confidence 9999999999999999984 6899999999988 9999 998 7775 7
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+.++..+.+||+++.. +.+.+++++||+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.. +
T Consensus 142 ~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~ 216 (332)
T cd08259 142 ALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---K 216 (332)
T ss_pred hhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---H
Confidence 8889999999999966 88999999999999999999999999999999999999888888887 88887777553 3
Q ss_pred HHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchh
Q 019012 216 LVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLY 295 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
+.+.+.+.. ++|++++++|......++++++++|+++.++...... ..........++.++.++... .
T Consensus 217 ~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~ 284 (332)
T cd08259 217 FSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKEIRIIGSISA-----T 284 (332)
T ss_pred HHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCCcEEEEecCC-----C
Confidence 455555544 6999999999888899999999999999998754321 111222333566766665322 2
Q ss_pred HHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 296 PRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 296 ~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.+.++++++++.+|.+++.+...+++++++++++.+.+++..+|++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 667889999999999988777788999999999999988888888863
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=267.88 Aligned_cols=301 Identities=20% Similarity=0.233 Sum_probs=244.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.++ + .+.+. ++|.|.|.+ ++||+||+.++++|++|+..+.|.+. ...|.++|||++| +|
T Consensus 1 m~~~~~~~~--~-----~~~~~--~~~~p~~~~--~~ev~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G--~V 65 (345)
T cd08287 1 MRATVIHGP--G-----DIRVE--EVPDPVIEE--PTDAVIRVVATCVCGSDLWPYRGVSP--TRAPAPIGHEFVG--VV 65 (345)
T ss_pred CceeEEecC--C-----ceeEE--eCCCCCCCC--CCeEEEEEeeeeecccchhhhcCCCC--CCCCcccccceEE--EE
Confidence 688999875 3 34554 467776534 99999999999999999988877543 2447899999887 99
Q ss_pred EEeccCCCCCCCCCEEEE-e-----------------------------cCcceeEEeecc--ccceecCCCCCCChhhh
Q 019012 87 KVVDSDNPNFKPGDLVAG-L-----------------------------TGWEEYSLIRKT--EQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~i~p~~~~~~~~~ 134 (347)
+++|++++.+++||+|++ + |+|++|+.++.+ . ++++ |++ ++++
T Consensus 66 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~---l~~~ 140 (345)
T cd08287 66 EEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGT-LVKV-PGS---PSDD 140 (345)
T ss_pred EEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCc-eEEC-CCC---CChh
Confidence 999999999999999986 2 788999999974 6 9999 998 6652
Q ss_pred ------hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCee
Q 019012 135 ------IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEA 207 (347)
Q Consensus 135 ------~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~v 207 (347)
.+++...+++||+++ ..+++.+|++++|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|++.+
T Consensus 141 ~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v 217 (345)
T cd08287 141 EDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDI 217 (345)
T ss_pred hhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceE
Confidence 124457889999998 468899999999977 699999999999999994 888888888888888 9999999
Q ss_pred eecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeec
Q 019012 208 FNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285 (347)
Q Consensus 208 i~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
++++.. ++.+.+.+.+++ ++|+++|++|+ ..+..++++++++|+++.++..... ........+.+++++.+
T Consensus 218 ~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 218 VAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG------VELDVRELFFRNVGLAG 290 (345)
T ss_pred ecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC------CccCHHHHHhcceEEEE
Confidence 999876 788888888876 89999999985 6889999999999999999865421 12333355778888877
Q ss_pred cccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 286 FLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.... ..+.++++++++.++.+++. +...+++++++++++.+.+++.. |++|+
T Consensus 291 ~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 291 GPAP-----VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred ecCC-----cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 4332 25679999999999998863 45677999999999998876654 88885
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=262.64 Aligned_cols=312 Identities=28% Similarity=0.367 Sum_probs=254.5
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
||+.+..+ +.+. .+.+. +.+.|.+ + +++++|||.++++|+.|+....+.+. ..+|.++|||++| +|+
T Consensus 1 ~~~~~~~~--~~~~--~~~~~--~~~~~~~-~--~~~v~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G--~v~ 67 (320)
T cd05286 1 KAVRIHKT--GGPE--VLEYE--DVPVPEP-G--PGEVLVRNTAIGVNFIDTYFRSGLYP--LPLPFVLGVEGAG--VVE 67 (320)
T ss_pred CeEEEecC--CCcc--ceEEe--ecCCCCC-C--CCEEEEEEEEeecCHHHHHHhcCCCC--CCCCccCCcceeE--EEE
Confidence 46666655 5442 34443 3555534 4 99999999999999999988777542 2457789999888 999
Q ss_pred EeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEE
Q 019012 88 VVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFV 163 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI 163 (347)
.+|+++++|++||+|+++ |+|++|+.++.+. ++++ |++ ++.. +++++..++++++++....++.+|++|||
T Consensus 68 ~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~---~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI 142 (320)
T cd05286 68 AVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASR-LVKL-PDG---ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLV 142 (320)
T ss_pred EECCCCCCCCCCCEEEEecCCCceeEEEEecHHH-ceeC-CCC---CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE
Confidence 999999999999999985 6999999999988 9999 998 7775 77889999999999988889999999999
Q ss_pred EcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHH
Q 019012 164 SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDA 242 (347)
Q Consensus 164 ~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~ 242 (347)
+|++|++|++++++++.+|++|++++.++++.+.++ ++|++++++.... ++.+.+++.+.+ ++|++|+|+++.....
T Consensus 143 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~ 220 (320)
T cd05286 143 HAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEG 220 (320)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHH
Confidence 999999999999999999999999999999999998 8999888888776 788888888876 8999999999888899
Q ss_pred HHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc---cchhHHHHHHHHHHHHCCceeeeeeccc
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY---LHLYPRFLDYVISNYKQGKIVYVEDMNE 319 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i~~~~~~~~ 319 (347)
++++++++|+++.+|..... ........+..+++++.+.....+ +....+.++++++++.++.+.+.....+
T Consensus 221 ~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 295 (320)
T cd05286 221 SLDSLRPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRY 295 (320)
T ss_pred HHHhhccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceE
Confidence 99999999999999875431 112233334477777765433222 3344567788999999999887766778
Q ss_pred ccccHHHHHHHhhcCcccceEEEEe
Q 019012 320 GLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 320 ~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
++++++++++.+.++...+|+++++
T Consensus 296 ~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 296 PLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cHHHHHHHHHHHHcCCCCceEEEeC
Confidence 9999999999999888888888753
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=261.78 Aligned_cols=315 Identities=27% Similarity=0.384 Sum_probs=259.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++.+... +.+. .+.+ .+.+.|.+ + +++++|+|.++++|+.|.....+.+.....+|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~--~~~~~~~~-~--~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v 69 (328)
T cd08268 1 MRAVRFHQF--GGPE--VLRI--EELPVPAP-G--AGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAG--VV 69 (328)
T ss_pred CeEEEEecc--CCcc--eeEE--eecCCCCC-C--CCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEE--EE
Confidence 688888876 5543 3444 44565645 4 99999999999999999988877654444557899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe--------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL--------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+.+|+++++|++||+|+++ |++++|+.++++. ++++ |++ ++++ ++.++..+.+||+++.....+.+
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 144 (328)
T cd08268 70 EAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAA-VVKL-PDG---LSFVEAAALWMQYLTAYGALVELAGLRP 144 (328)
T ss_pred EeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHh-cEeC-CCC---CCHHHHHHhhhHHHHHHHHHHHhcCCCC
Confidence 9999999999999999986 7899999999998 9999 999 7775 78899999999999988888999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
+++++|+|++|++|++++++++..|++|++++++.++.+.++ ++|++.+++.+.. ++...+.+.+.+ ++|+++++.+
T Consensus 145 ~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~ 222 (328)
T cd08268 145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVG 222 (328)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCc
Confidence 999999999999999999999999999999999999999998 8998888888775 777778777766 8999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc---cchhHHHHHHHHHHHHCCceee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY---LHLYPRFLDYVISNYKQGKIVY 313 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i~~ 313 (347)
+.....++++++++|+++.+|..... .........+.+++++.+...... +....+.++.+.+++.++.+.+
T Consensus 223 ~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (328)
T cd08268 223 GPQFAKLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP 297 (328)
T ss_pred hHhHHHHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcC
Confidence 98889999999999999999865431 112233335778888877654432 3344566777888888888887
Q ss_pred eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 314 VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 314 ~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.....++++++.++++.+..++..+|+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 298 VVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred CcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 7777789999999999998888778988763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=265.21 Aligned_cols=312 Identities=26% Similarity=0.326 Sum_probs=244.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
+||+++..+ +.+. .+.+ .+.+.|.+. +++++||+.++++|+.|+..+.+.+.....+|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~--~~~~~~~~~---~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v 69 (331)
T cd08273 1 NREVVVTRR--GGPE--VLKV--VEADLPEPA---AGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVG--RV 69 (331)
T ss_pred CeeEEEccC--CCcc--cEEE--eccCCCCCC---CCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEE--EE
Confidence 488999987 7664 3444 446667664 99999999999999999988877553333468899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+.+|+++++|++||+|+++ |+|++|+.++.+. ++++ |++ +++. ++.++.++.+||+++.+...+.++++++
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~---~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vl 144 (331)
T cd08273 70 DALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKY-LVPV-PEG---VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVL 144 (331)
T ss_pred EEeCCCCccCCCCCEEEEeCCCcceeeEEEechHH-eEEC-CCC---CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence 9999999999999999996 8999999999988 9999 999 7775 7789999999999998878899999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~ 242 (347)
|+|++|++|++++++|+..|++|++++. +++.+.++ ++|+. .++.+.. ++... +...+++|+++||+++.....
T Consensus 145 I~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~-~~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~ 218 (331)
T cd08273 145 IHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGAT-PIDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEE 218 (331)
T ss_pred EECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCe-EEcCCCc-chhhh--hccCCCceEEEECCchHHHHH
Confidence 9999999999999999999999999997 88888888 89975 3455443 44333 333358999999999988999
Q ss_pred HHHhhhcCCeEEEEcccccccCCCCCCccc------------hHHHhhcceEeecccccc--ccchhHHHHHHHHHHHHC
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHN------------LFTLVTKRITMKGFLQSD--YLHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 308 (347)
++++++++|+++.+|.....+.. ..... ......++.++.+..... .+....+.++++++++.+
T Consensus 219 ~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 296 (331)
T cd08273 219 SYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAK 296 (331)
T ss_pred HHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHC
Confidence 99999999999999876442110 00000 011122233333322211 133446789999999999
Q ss_pred CceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 309 GKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 309 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
|.+.+.+...+++++++++++.+.+++..||+|+
T Consensus 297 ~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 297 GKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred CCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 9998877777899999999999988887788875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=267.46 Aligned_cols=317 Identities=24% Similarity=0.285 Sum_probs=240.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--------C------CCCC
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--------S------SYIP 72 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--------~------~~~~ 72 (347)
|||++++++ |++. ..+.+ ++.+.|.|.+ +++|+|||.++++|+.|...+.|... + ....
T Consensus 1 ~~a~~~~~~--~~~~-~~~~~--~~~~~p~~~~--~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 73 (350)
T cd08248 1 MKAWQIHSY--GGID-SLLLL--ENARIPVIRK--PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEF 73 (350)
T ss_pred CceEEeccc--CCCc-ceeee--cccCCCCCCC--CCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCC
Confidence 688988887 7652 12444 4577776634 88999999999999999988877321 0 2345
Q ss_pred CCCCCCceecceEEEEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhH
Q 019012 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTA 145 (347)
Q Consensus 73 p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta 145 (347)
|.++|||++| +|+.+|+++++|++||+|+++ |+|++|+.+++++ ++++ |++ ++++ ++.++..+.+|
T Consensus 74 p~~~G~e~~G--~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~---~~~~~aa~~~~~~~ta 146 (350)
T cd08248 74 PLTLGRDCSG--VVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENE-VSKK-PKN---LSHEEAASLPYAGLTA 146 (350)
T ss_pred CeeecceeEE--EEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHH-eecC-CCC---CCHHHHhhchhHHHHH
Confidence 8899999888 999999999999999999984 8999999999998 9999 999 7775 77889999999
Q ss_pred HHHHHhhcCCCC----CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHH
Q 019012 146 YAGFHEVCSPKS----GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALK 221 (347)
Q Consensus 146 ~~al~~~~~~~~----~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~ 221 (347)
|+++.+...+.+ |++++|+|++|++|++++++|+.+|++|+++.++ ++.+.++ ++|++.+++.... ++.+.+.
T Consensus 147 ~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~ 223 (350)
T cd08248 147 WSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELT 223 (350)
T ss_pred HHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHH
Confidence 999977777654 9999999999999999999999999999988865 5667777 8999888888765 5555554
Q ss_pred HHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCC-CCC-ccchHHHhhcceEeecccc-----ccccch
Q 019012 222 RCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHD-PQG-IHNLFTLVTKRITMKGFLQ-----SDYLHL 294 (347)
Q Consensus 222 ~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~ 294 (347)
.. +++|++||++|+.....++++++++|+++.+|......... ... ......+......+..... ......
T Consensus 224 ~~--~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
T cd08248 224 ER--GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSP 301 (350)
T ss_pred hc--CCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECC
Confidence 32 37999999999989999999999999999998653211000 000 0000001111111111000 000122
Q ss_pred hHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 295 YPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
..+.++++++++.+|.+.+.+...+++++++++++.+.+++..+|+++
T Consensus 302 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 302 SGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred CHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 367799999999999998877778899999999999988877778776
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=260.69 Aligned_cols=309 Identities=28% Similarity=0.377 Sum_probs=252.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.+ +.+. .+.+. +.+.|.+ . +++|+|++.++++|+.|+....+.+......|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~~--~~~~~--~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v 69 (326)
T cd08272 1 MKALVLESF--GGPE--VFELR--EVPRPQP-G--PGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAG--VV 69 (326)
T ss_pred CeEEEEccC--CCch--heEEe--ecCCCCC-C--CCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeE--EE
Confidence 689999887 6653 34454 4555545 4 99999999999999999988777543223347889999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe--------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL--------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+.+|+++.+|++||+|+++ |+|++|+.++++. ++++ |++ +++. ++.++..+.+||+++.+..++.+
T Consensus 70 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~---~~~~~~~~~~~~~~~a~~~l~~~~~~~~ 144 (326)
T cd08272 70 EAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL-LALK-PAN---LSMREAAALPLVGITAWEGLVDRAAVQA 144 (326)
T ss_pred EEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHH-cccC-CCC---CCHHHHHHhHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999986 6899999999988 9999 998 7775 77888899999999888899999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
+++++|+|++|++|++++++++..|++|++++++ ++.+.++ ++|++.+++... .+.+.+++.+.+ ++|+++|+++
T Consensus 145 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~ 220 (326)
T cd08272 145 GQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVG 220 (326)
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCC
Confidence 9999999999999999999999999999999988 8889998 899988888765 366778888877 8999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc------ccchhHHHHHHHHHHHHCCc
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD------YLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~g~ 310 (347)
+.....++++++++|+++.++.... ........+++++.+..... .+....+.+.++++++.++.
T Consensus 221 ~~~~~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (326)
T cd08272 221 GETLDASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQ 291 (326)
T ss_pred hHHHHHHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCC
Confidence 8888899999999999999986421 11112235677776655322 13334667889999999999
Q ss_pred eeeeee-cccccccHHHHHHHhhcCcccceEEEEe
Q 019012 311 IVYVED-MNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 311 i~~~~~-~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+++.+. ..++++++.++++.+.+++..+|+++++
T Consensus 292 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 292 LRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 887655 7789999999999998887778988864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=259.75 Aligned_cols=315 Identities=26% Similarity=0.334 Sum_probs=258.5
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+.+... +.+. .+.+.+ .+.|.+ + +++++|||.++++|+.|.....+.+.....+|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~~~--~~~~~l-~--~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v 69 (325)
T TIGR02824 1 MKAIEITEP--GGPE--VLVLVE--VPLPVP-K--AGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAG--EV 69 (325)
T ss_pred CceEEEccC--CCcc--cceEEe--CCCCCC-C--CCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEE--EE
Confidence 578888776 5442 344433 444434 4 99999999999999999988776553333457899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+.+|+++.++++||+|+++ |+|++|+.++.+. ++++ |++ +++. +++++.+++++|+++.+...+.++++++
T Consensus 70 ~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~---~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vl 144 (325)
T TIGR02824 70 VAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQ-VLPV-PEG---LSLVEAAALPETFFTVWSNLFQRGGLKAGETVL 144 (325)
T ss_pred EEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHH-cEeC-CCC---CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEE
Confidence 9999999999999999996 7999999999988 9999 998 7764 7789999999999987888999999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLD 241 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~ 241 (347)
|+|++|++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++...++....+ ++|+++++.|+..+.
T Consensus 145 v~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 222 (325)
T TIGR02824 145 IHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLN 222 (325)
T ss_pred EEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHH
Confidence 9999999999999999999999999999999888887 8998888887775 777788887776 899999999988888
Q ss_pred HHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHHHCCceeeeee
Q 019012 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
.++++++++|+++.+|...... .......++.+++++.+...... +....+.+.++++++.++.+.+...
T Consensus 223 ~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 297 (325)
T TIGR02824 223 RNIKALALDGRIVQIGFQGGRK-----AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVID 297 (325)
T ss_pred HHHHhhccCcEEEEEecCCCCc-----CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccc
Confidence 9999999999999998754321 12334455588999988775442 2223456788889999999887777
Q ss_pred cccccccHHHHHHHhhcCcccceEEEEe
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
..+++++++++++.+.+++..+|+++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 298 KVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred cEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 7789999999999999888788988764
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=264.21 Aligned_cols=304 Identities=24% Similarity=0.287 Sum_probs=242.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCC--CCCCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF--TSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~--~~~~~~p~i~G~e~~G~g 84 (347)
||+++++.. |. .+.+ .+.|.|.+. ++|++|||.++++|+.|...+.+.. .+...+|.++|||++|
T Consensus 1 ~~~~~~~~~--~~----~~~~--~~~~~~~~~---~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G-- 67 (341)
T cd05281 1 MKAIVKTKA--GP----GAEL--VEVPVPKPG---PGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAG-- 67 (341)
T ss_pred CcceEEecC--CC----ceEE--EeCCCCCCC---CCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEE--
Confidence 588999886 43 2445 456777664 9999999999999999987754422 1123457789999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
+|+.+|++++.+++||+|+++ |+|++|++++++. ++++ |++ ++.+
T Consensus 68 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~l-P~~---~~~~ 142 (341)
T cd05281 68 EVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEEN-LWKN-DKD---IPPE 142 (341)
T ss_pred EEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHH-cEEC-cCC---CCHH
Confidence 999999999999999999873 7899999999988 9999 999 7767
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
.++++.++.++++++. ...++|++|||.|+ |++|++++|+|+..|+ +|+++++++++.+.++ ++|++++++++..
T Consensus 143 ~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 218 (341)
T cd05281 143 IASIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE 218 (341)
T ss_pred HhhhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc
Confidence 6788889999999874 45678999999874 9999999999999999 7999988888888888 8999888888765
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
++. .+++.+++ ++|++|||+|+ .....++++|+++|+++.+|..... .. ......+..++..+.+....
T Consensus 219 -~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~--~~~~~~~~~~~~~~~~~~~~-- 289 (341)
T cd05281 219 -DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP---VD--IDLNNLVIFKGLTVQGITGR-- 289 (341)
T ss_pred -cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC---cc--cccchhhhccceEEEEEecC--
Confidence 677 78888776 89999999986 5788999999999999999865331 01 11122356677777665422
Q ss_pred cchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 292 LHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
...+.++++++++.++.+.+ .+...+++++++++++.+.+++ .+|+|+++
T Consensus 290 --~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 290 --KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred --CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 22355788999999998863 3556679999999999999988 88999863
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=267.00 Aligned_cols=295 Identities=20% Similarity=0.203 Sum_probs=234.7
Q ss_pred EEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC------CCCCCCCCCCCceecceEEEEeccCCCCCCCCC
Q 019012 27 IKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT------SSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGD 100 (347)
Q Consensus 27 ~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~------~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd 100 (347)
++..++|.|.+. +++|+||+.++++|++|+..+.+... .....|.++|||++| +|+++|++++.|++||
T Consensus 39 ~~~~~~~~p~~~---~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd 113 (384)
T cd08265 39 LRVEDVPVPNLK---PDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSG--VVEKTGKNVKNFEKGD 113 (384)
T ss_pred EEEEECCCCCCC---CCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEE--EEEEECCCCCCCCCCC
Confidence 344557888764 99999999999999999987763211 113457899999887 9999999999999999
Q ss_pred EEEE------------------------------ecCcceeEEeeccccceecCCCCCCC-----hhhhhhhcCChhhhH
Q 019012 101 LVAG------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIP-----LSYHIGLLGMPGFTA 145 (347)
Q Consensus 101 ~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~-----~~~~~a~l~~~~~ta 145 (347)
+|++ .|+|++|+.++++. ++++ |++ ++ ++.+.|+++.++++|
T Consensus 114 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~-~~~l-P~~-~~~~~~~~~~~~a~~~~~~~ta 190 (384)
T cd08265 114 PVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARY-AWEI-NEL-REIYSEDKAFEAGALVEPTSVA 190 (384)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHH-eEEC-Ccc-ccccccCCCHHHhhhhhHHHHH
Confidence 9985 37899999999988 9999 875 10 244577888899999
Q ss_pred HHHHHhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH--HHHHHHHH
Q 019012 146 YAGFHEV-CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE--TDLVAALK 221 (347)
Q Consensus 146 ~~al~~~-~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~~~~~i~ 221 (347)
|+++... .++++|++|||+| .|++|++++|+|+..|+ +|+++++++++.+.++ ++|+++++++++. .++.+.++
T Consensus 191 ~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~v~ 268 (384)
T cd08265 191 YNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLSGEKVM 268 (384)
T ss_pred HHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccHHHHHH
Confidence 9999666 6899999999996 59999999999999999 8999998888888888 9999888887631 15677788
Q ss_pred HHCCC-CccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHH
Q 019012 222 RCFPQ-GIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRF 298 (347)
Q Consensus 222 ~~~~g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (347)
+++.+ ++|+++|+.|+ ..+..++++++++|+++.+|..... .......+..+..++.+..... ....
T Consensus 269 ~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~----~~~~ 338 (384)
T cd08265 269 EVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT------VPLHLEVLQVRRAQIVGAQGHS----GHGI 338 (384)
T ss_pred HhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC------CcccHHHHhhCceEEEEeeccC----Ccch
Confidence 88877 89999999996 3788999999999999999864321 1223345666667777664322 2346
Q ss_pred HHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEE
Q 019012 299 LDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 299 ~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
+++++++++++.+++. +...++++++++|++.+.++ ..+|+|+
T Consensus 339 ~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 339 FPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 8889999999999864 55678999999999997665 4578775
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=264.45 Aligned_cols=319 Identities=22% Similarity=0.251 Sum_probs=237.5
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
|++++.++ +.+. .++..++|.|.+.+ +++|+||+.++++|+.|+..+.+........|.++|||++| +|+
T Consensus 2 ~~~~~~~~--~~~~----~~~~~~~~~p~~~~--~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~V~ 71 (352)
T cd08247 2 KALTFKNN--TSPL----TITTIKLPLPNCYK--DNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSG--VIV 71 (352)
T ss_pred ceEEEecC--CCcc----eeeccCCCCCCCCC--CCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEE--EEE
Confidence 67888887 6663 67777777764335 99999999999999999877654221112237889999888 999
Q ss_pred EeccCCC-CCCCCCEEEEe--------cCcceeEEeecc----ccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhc
Q 019012 88 VVDSDNP-NFKPGDLVAGL--------TGWEEYSLIRKT----EQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVC 153 (347)
Q Consensus 88 ~vg~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~ 153 (347)
++|++++ +|++||+|+++ |+|++|+.+++. . ++++ |++ ++++ ++.++..+.|||+++....
T Consensus 72 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-~~~l-P~~---l~~~~aa~~~~~~~ta~~~l~~~~ 146 (352)
T cd08247 72 KVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKS-ITRK-PEN---ISLEEAAAWPLVLGTAYQILEDLG 146 (352)
T ss_pred EeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccce-eEEC-CCC---CCHHHHHHhHHHHHHHHHHHHHhh
Confidence 9999998 89999999985 799999999987 5 8999 998 7775 7888999999999997766
Q ss_pred -CCCCCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHH---HHHH-HHHHCCC
Q 019012 154 -SPKSGEYVFVSAASGAVGQLVGQLAKLH-GC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD---LVAA-LKRCFPQ 226 (347)
Q Consensus 154 -~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~---~~~~-i~~~~~g 226 (347)
++++|+++||+|+++++|++++|+|+.. |. +|+++. ++++.+.++ ++|+++++++++. + +... ++..+++
T Consensus 147 ~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~ 223 (352)
T cd08247 147 QKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQ 223 (352)
T ss_pred hccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHHHhhcCC
Confidence 7999999999999999999999999987 55 677776 455566777 8999889988765 4 4444 4444424
Q ss_pred -CccEEEeCCCh-hhHHHHHHhhh---cCCeEEEEcccccccCCCCC-----CccchHHHhhcceEeeccccccc-cchh
Q 019012 227 -GIDIYFDNVGG-EMLDAALLNMR---DHGRIAVCGMVSLHSYHDPQ-----GIHNLFTLVTKRITMKGFLQSDY-LHLY 295 (347)
Q Consensus 227 -~~d~vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 295 (347)
++|++|||+|+ .....++++++ ++|+++.++.....++.... ........+.++.++........ ....
T Consensus 224 ~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T cd08247 224 GKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPN 303 (352)
T ss_pred CCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCC
Confidence 89999999998 67889999999 99999987532211000000 00000111222222222211110 0011
Q ss_pred HHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 296 PRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 296 ~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.++++++++.++.+++.+...+++++++++++.+.+++..+|+++++
T Consensus 304 ~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 304 ADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 4678889999999999887777889999999999999888888998863
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=261.67 Aligned_cols=293 Identities=26% Similarity=0.361 Sum_probs=233.8
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++..+ + +. .+.+ .+.+.|.+ + ++||+||+.++++|++|+..+.+.. ...+|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~-~~--~~~~--~~~~~~~~-~--~~ev~v~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G--~v 66 (325)
T cd08264 1 MKALVFEKS--G-IE--NLKV--EDVKDPKP-G--PGEVLIRVKMAGVNPVDYNVINAVK--VKPMPHIPGAEFAG--VV 66 (325)
T ss_pred CeeEEeccC--C-CC--ceEE--EeccCCCC-C--CCeEEEEEEEEEechHHHHHHhCCC--CCCCCeecccceeE--EE
Confidence 688988775 5 32 3445 44666645 4 9999999999999999987765421 12347889999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+++|++++.|++||+|+++ |+|++|+.++++. ++++ |++ ++++ +
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~---~~~~~~ 141 (325)
T cd08264 67 EEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKN-LFKI-PDS---ISDELA 141 (325)
T ss_pred EEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHH-ceeC-CCC---CCHHHh
Confidence 9999999999999999863 7899999999998 9999 999 7775 7
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+.++..+.+||+++.. .+++++++++|+|++|++|++++++|+..|++|+++++ .+.++ ++|++++++.++
T Consensus 142 ~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~--- 212 (325)
T cd08264 142 ASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE--- 212 (325)
T ss_pred hhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH---
Confidence 8889999999999955 88999999999999999999999999999999988873 36676 899988887753
Q ss_pred HHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchh
Q 019012 216 LVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLY 295 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
..+.+++++ +++|+++|++|+..+..++++++++|+++.+|..... ....+...+..++.++.+.....
T Consensus 213 ~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----- 281 (325)
T cd08264 213 VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQISIIGSTGGT----- 281 (325)
T ss_pred HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcCcEEEEccCCC-----
Confidence 355666666 6799999999998899999999999999999864221 12344556666777777765443
Q ss_pred HHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceE
Q 019012 296 PRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQ 340 (347)
Q Consensus 296 ~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~ 340 (347)
.+.++++++++.... ..+...++++++++|++.+.+++..+|+
T Consensus 282 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 567888888886443 4456678999999999999887766654
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=261.14 Aligned_cols=299 Identities=30% Similarity=0.424 Sum_probs=239.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + ++.+. ++|.|.+ . ++||+||++++++|+.|+....|.+. ..+|.++|+|++| +|
T Consensus 1 ~~a~~~~~~--~-----~~~~~--~~~~~~l-~--~~~v~v~v~~~~l~~~d~~~~~g~~~--~~~p~~~g~~~~G--~v 64 (334)
T cd08234 1 MKALVYEGP--G-----ELEVE--EVPVPEP-G--PDEVLIKVAACGICGTDLHIYEGEFG--AAPPLVPGHEFAG--VV 64 (334)
T ss_pred CeeEEecCC--C-----ceEEE--eccCCCC-C--CCeEEEEEEEEeEchhhhHHhcCCCC--CCCCcccccceEE--EE
Confidence 689999876 4 34554 4677755 4 99999999999999999988888653 2368899999887 99
Q ss_pred EEeccCCCCCCCCCEEEE------------------------------ecCcceeEEeeccccceecCCCCCCChhhhhh
Q 019012 87 KVVDSDNPNFKPGDLVAG------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIG 136 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a 136 (347)
+.+|++++++++||+|++ .|+|++|+.++++. ++++ |++ +++..+
T Consensus 65 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~---~~~~~a 139 (334)
T cd08234 65 VAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQ-VYKI-PDN---LSFEEA 139 (334)
T ss_pred EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHH-cEEC-cCC---CCHHHH
Confidence 999999999999999987 27899999999998 9999 999 776533
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
++...+.++++++ ..+++++++++||+|+ |.+|++++++|+..|++ |+++++++++.+.++ ++|++.++++++. +
T Consensus 140 a~~~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~ 215 (334)
T cd08234 140 ALAEPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-D 215 (334)
T ss_pred hhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-C
Confidence 3447888999998 7789999999999974 99999999999999996 888998999999998 8999888888764 4
Q ss_pred HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccch
Q 019012 216 LVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL 294 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.... +...++++|++||+++. .....++++++++|+++.+|..... .........++.+++++.+....
T Consensus 216 ~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----- 285 (334)
T cd08234 216 PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFIN----- 285 (334)
T ss_pred HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEeccC-----
Confidence 4444 33333489999999985 6788999999999999999875431 11123334445567777765432
Q ss_pred hHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEE
Q 019012 295 YPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.+.+++++++++++.+.+. +..++++++++++++.+.+ ...+|+||
T Consensus 286 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 -PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred -HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 4568899999999988753 5567899999999999998 66778876
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=262.91 Aligned_cols=290 Identities=22% Similarity=0.295 Sum_probs=235.2
Q ss_pred eecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--CCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEE---
Q 019012 30 SGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--SSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG--- 104 (347)
Q Consensus 30 ~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~--- 104 (347)
.+.|.|.+ + ++|++||+.++++|+.|+.++.+... +...+|.++|||++| +|+++|+++++|++||+|++
T Consensus 14 ~~~~~p~~-~--~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~ 88 (340)
T TIGR00692 14 TEVPVPEP-G--PGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAG--EVVGIGPGVEGIKVGDYVSVETH 88 (340)
T ss_pred EECCCCCC-C--CCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEE--EEEEECCCCCcCCCCCEEEECCc
Confidence 45777766 4 99999999999999999987655321 223457789999888 99999999999999999986
Q ss_pred ------------------------e---cCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCC
Q 019012 105 ------------------------L---TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 105 ------------------------~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+ |+|++|+.++++. ++++ |++ ++.+.++++.++.+|++++ .....+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~---~~~~~a~~~~~~~~a~~~~--~~~~~~ 161 (340)
T TIGR00692 89 IVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQN-IWKN-PKS---IPPEYATIQEPLGNAVHTV--LAGPIS 161 (340)
T ss_pred CCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHH-cEEC-cCC---CChHhhhhcchHHHHHHHH--HccCCC
Confidence 2 7899999999998 9999 999 7766677888999999987 345789
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNV 235 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~ 235 (347)
|+++||.| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++... ++.+.+.+.+++ ++|++|||.
T Consensus 162 g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~~ 238 (340)
T TIGR00692 162 GKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEMS 238 (340)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEECC
Confidence 99999977 599999999999999996 888888888888888 8999888888776 788888888776 899999998
Q ss_pred Ch-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCcee--
Q 019012 236 GG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV-- 312 (347)
Q Consensus 236 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~-- 312 (347)
|+ ..+...+++|+++|+++.+|..... ........+..+++++.+... ....+.+++++++++++.++
T Consensus 239 g~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~ 309 (340)
T TIGR00692 239 GAPKALEQGLQAVTPGGRVSLLGLPPGK-----VTIDFTNKVIFKGLTIYGITG----RHMFETWYTVSRLIQSGKLDLD 309 (340)
T ss_pred CCHHHHHHHHHhhcCCCEEEEEccCCCC-----cccchhhhhhhcceEEEEEec----CCchhhHHHHHHHHHcCCCChH
Confidence 85 5788999999999999999875321 111122355667777766542 22345678899999999987
Q ss_pred eeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 313 YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 313 ~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.+...++++++.++++.+.+++. ||+|+++
T Consensus 310 ~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 310 PIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred HheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 445677799999999999988875 8999864
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=262.65 Aligned_cols=290 Identities=23% Similarity=0.258 Sum_probs=232.6
Q ss_pred eEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecceEEEEeccCCCCCCCCCEE
Q 019012 25 MEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV 102 (347)
Q Consensus 25 ~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V 102 (347)
+.+ .++|.|.+. ++||+|||.++++|+.|++.+.+...+ ....|.++|+|++| +|+++|+++++|++||+|
T Consensus 10 ~~~--~~~~~~~l~---~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd~V 82 (343)
T cd05285 10 LRL--EERPIPEPG---PGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAG--TVVAVGSGVTHLKVGDRV 82 (343)
T ss_pred eeE--EECCCCCCC---CCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeE--EEEeeCCCCCCCCCCCEE
Confidence 445 456777664 999999999999999998765332111 12347789999888 999999999999999999
Q ss_pred EE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHh
Q 019012 103 AG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHE 151 (347)
Q Consensus 103 ~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~ 151 (347)
++ .|+|++|+.++++. ++++ |++ ++++.+++..++.+|++++ .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~---~~~~~aa~~~~~~~a~~~~-~ 156 (343)
T cd05285 83 AIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADF-CHKL-PDN---VSLEEGALVEPLSVGVHAC-R 156 (343)
T ss_pred EEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHH-cEEC-cCC---CCHHHhhhhhHHHHHHHHH-H
Confidence 86 37899999999988 9999 999 7875333446889999997 7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHHH---HHHHHHHCCC-
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDL---VAALKRCFPQ- 226 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~---~~~i~~~~~g- 226 (347)
.+++++|+++||.|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++.+++++.. ++ .+.+++.+.+
T Consensus 157 ~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~ 233 (343)
T cd05285 157 RAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPESAEKIAELLGGK 233 (343)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhHHHHHHHHhCCC
Confidence 799999999999874 99999999999999997 999988899999998 8999999988765 53 7778887776
Q ss_pred CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHH
Q 019012 227 GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISN 305 (347)
Q Consensus 227 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (347)
++|++|||.|+. .+..++++++++|+++.+|..... ...+......+++++.++... .+.+++++++
T Consensus 234 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 301 (343)
T cd05285 234 GPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY------ANTYPTAIEL 301 (343)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC------hHHHHHHHHH
Confidence 899999999975 889999999999999999864321 122333556667776665432 2568889999
Q ss_pred HHCCcee--eeeecccccccHHHHHHHhhcCc-ccceEEE
Q 019012 306 YKQGKIV--YVEDMNEGLENAPAAFVGLFSGK-NVGKQVV 342 (347)
Q Consensus 306 l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~-~~gk~vv 342 (347)
++++.+. +.+..+++++++.++++.+.+++ ..+|++|
T Consensus 302 l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 302 LASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 9999865 34566789999999999998875 4479887
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=257.27 Aligned_cols=295 Identities=21% Similarity=0.189 Sum_probs=238.1
Q ss_pred EEEeecccCCCCCCCCCcEEEEEEEeecChhccccc-ccCCCC-CCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEE
Q 019012 27 IKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM-RSSFTS-SYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG 104 (347)
Q Consensus 27 ~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~-~~~~~~-~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~ 104 (347)
+...+++.|.+ . ++||+||+.++++|+.|+..+ .+.... ...+|.++|+|++| +|+.+|++++.+++||+|++
T Consensus 7 ~~~~~~~~~~l-~--~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 7 FEVEEHPRPTP-G--PGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWG--RVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred eEEEECCCCCC-C--CCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEE--EEEEECCCCcCCCCCCEEEE
Confidence 34445677765 4 999999999999999998876 554311 12247899999777 99999999999999999998
Q ss_pred e--cCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC
Q 019012 105 L--TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182 (347)
Q Consensus 105 ~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G 182 (347)
+ |+|++|+.++++. ++++ |++ + ..++.+..+++++++++. ..++++++++||+| .|++|++++|+|+..|
T Consensus 82 ~~~g~~~~~~~v~~~~-~~~l-P~~---~-~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g 153 (312)
T cd08269 82 LSGGAFAEYDLADADH-AVPL-PSL---L-DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAG 153 (312)
T ss_pred ecCCcceeeEEEchhh-eEEC-CCc---h-hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 6 7999999999998 9999 998 6 223333478899999985 78899999999997 5999999999999999
Q ss_pred CE-EEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEccc
Q 019012 183 CY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 183 ~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
++ |+++++++++.+.++ ++|++.+++.+.. ++.+.+++++.+ ++|++|||+|+ .....++++++++|+++.+|..
T Consensus 154 ~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 154 ARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYH 231 (312)
T ss_pred CcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccC
Confidence 98 999999988989888 9999888887765 788888888876 89999999985 5788999999999999999865
Q ss_pred ccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcc-
Q 019012 260 SLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKN- 336 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~- 336 (347)
... ........+..++.++.++.... +....+.+++++++++++.+++ .+...+++++++++++.+.+++.
T Consensus 232 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 305 (312)
T cd08269 232 QDG-----PRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDG 305 (312)
T ss_pred CCC-----CcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCC
Confidence 421 12233345667777776654333 2334678999999999999987 35667899999999999998864
Q ss_pred cceEEE
Q 019012 337 VGKQVV 342 (347)
Q Consensus 337 ~gk~vv 342 (347)
.+|+++
T Consensus 306 ~~~~~~ 311 (312)
T cd08269 306 FIKGVI 311 (312)
T ss_pred ceEEEe
Confidence 468776
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=257.88 Aligned_cols=286 Identities=22% Similarity=0.298 Sum_probs=236.7
Q ss_pred CCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe-----cCcceeEEeec
Q 019012 42 SGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL-----TGWEEYSLIRK 116 (347)
Q Consensus 42 ~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~-----g~~~~~~~v~~ 116 (347)
+++++||+.++++|+.|+..+.+.+......|.++|+|++| +|+++|+++++|++||+|+++ |+|++|+.+++
T Consensus 7 ~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~ 84 (303)
T cd08251 7 PGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASG--VVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPE 84 (303)
T ss_pred CCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeE--EEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccH
Confidence 88999999999999999988887654334568899999887 999999999999999999986 79999999999
Q ss_pred cccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH
Q 019012 117 TEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV 195 (347)
Q Consensus 117 ~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~ 195 (347)
+. ++++ |++ ++.+ ++.++..+++||+++ +...+++|++++|+|+++++|++++|+++.+|++|+++++++++.
T Consensus 85 ~~-~~~~-p~~---~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~ 158 (303)
T cd08251 85 DQ-VVRK-PAS---LSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKL 158 (303)
T ss_pred HH-eEEC-CCC---CCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 88 9999 999 7775 788899999999998 578999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchH
Q 019012 196 DLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF 274 (347)
Q Consensus 196 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 274 (347)
+.++ ++|++.+++.... ++...+.+++++ ++|+++|++++.....++++++++|+++.++...... .......
T Consensus 159 ~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~ 232 (303)
T cd08251 159 EYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDLS 232 (303)
T ss_pred HHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccChh
Confidence 9998 8999999998876 788888888877 8999999999888899999999999999988653211 0111111
Q ss_pred HHhhcceEeeccccc----cccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 275 TLVTKRITMKGFLQS----DYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 275 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.+.++..+...... ..+....+.+.++.+++.+|.+++.....+++++++++++.+.+++..+|+++
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 233 -VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred -HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 12223332222111 11334467788899999999998877777899999999999998887778764
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=257.23 Aligned_cols=314 Identities=24% Similarity=0.323 Sum_probs=249.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ ++. .++.+ .++|.|.+ . +++++||+.++++|+.|+....+.+. ...+|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~--~~~~~--~~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G--~v 68 (325)
T cd08271 1 MKAWVLPKP--GAA--LQLTL--EEIEIPGP-G--AGEVLVKVHAAGLNPVDWKVIAWGPP-AWSYPHVPGVDGAG--VV 68 (325)
T ss_pred CeeEEEccC--CCc--ceeEE--eccCCCCC-C--CCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCcccccceEE--EE
Confidence 689999987 531 13444 55777766 4 99999999999999999988776542 22347889999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGE 159 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~ 159 (347)
+.+|++++.+++||+|+++ |+|++|+.++.+. ++++ |++ ++.. ++.++..+.+|++++.+.+++.+|+
T Consensus 69 ~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~-~~~i-p~~---~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~ 143 (325)
T cd08271 69 VAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARA-VLPL-PDS---LSFEEAAALPCAGLTAYQALFKKLRIEAGR 143 (325)
T ss_pred EEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHH-eEEC-CCC---CCHHHHHhhhhhHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999986 6999999999988 9999 998 7764 7789999999999998888999999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~ 238 (347)
+++|+|+++++|++++++++..|++|+++. ++++.+.+. .+|++.+++.... ++...+++.+.+ ++|++++++++.
T Consensus 144 ~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~ 220 (325)
T cd08271 144 TILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGE 220 (325)
T ss_pred EEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcH
Confidence 999999989999999999999999998887 667778887 8999888888775 677788888776 899999999988
Q ss_pred hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc---cchhHHHHHHHHHHHHCCceeeee
Q 019012 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY---LHLYPRFLDYVISNYKQGKIVYVE 315 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i~~~~ 315 (347)
.....+++++++|+++.++..... .........+..+++.+........ .....+.+.++++++.++.+.+..
T Consensus 221 ~~~~~~~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 296 (325)
T cd08271 221 TAAALAPTLAFNGHLVCIQGRPDA----SPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLV 296 (325)
T ss_pred hHHHHHHhhccCCEEEEEcCCCCC----cchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeecc
Confidence 778899999999999998754321 0001111122333444333322111 123456778899999999998776
Q ss_pred ecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 316 DMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 316 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
...++++++.++++.+.++...+|+++++
T Consensus 297 ~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 297 IEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 67789999999999999888788988763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=261.03 Aligned_cols=303 Identities=20% Similarity=0.224 Sum_probs=235.7
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecc
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGF 83 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~ 83 (347)
++++.++..+ . .+.+ .++|.|.+ + ++||+||+.++++|++|+..+.+...+ ....|.++|||++|
T Consensus 17 ~~~~~~~~~~--~-----~l~~--~~~~~p~~-~--~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G- 83 (364)
T PLN02702 17 ENMAAWLVGV--N-----TLKI--QPFKLPPL-G--PHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAG- 83 (364)
T ss_pred ccceEEEecC--C-----ceEE--EeccCCCC-C--CCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeE-
Confidence 4555555543 2 3345 44666756 4 999999999999999999887663211 12357899999887
Q ss_pred eEEEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChh
Q 019012 84 GVSKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLS 132 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~ 132 (347)
+|+++|+++++|++||+|++ .|+|++|+.++++. ++++ |++ ++
T Consensus 84 -~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~-~~~~-P~~---l~ 157 (364)
T PLN02702 84 -IIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKL-PEN---VS 157 (364)
T ss_pred -EEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHH-eEEC-CCC---CC
Confidence 99999999999999999986 37899999999988 9999 999 88
Q ss_pred hhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 133 YHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 133 ~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
++.+++..+++++++++ ...++.+++++||+| .|++|++++|+|+..|+ .|++++.++++.+.++ ++|++.++++.
T Consensus 158 ~~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 234 (364)
T PLN02702 158 LEEGAMCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVS 234 (364)
T ss_pred HHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecC
Confidence 76544445677789888 778899999999997 59999999999999999 5778888888888888 89998877643
Q ss_pred --CHHHHHHHHHHH---CCCCccEEEeCCC-hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeec
Q 019012 212 --DETDLVAALKRC---FPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285 (347)
Q Consensus 212 --~~~~~~~~i~~~---~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
.. ++.+.+.++ +++++|++||++| ...+..++++++++|+++.+|..... .......+..+++++.+
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~ 307 (364)
T PLN02702 235 TNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE------MTVPLTPAAAREVDVVG 307 (364)
T ss_pred cccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------CcccHHHHHhCccEEEE
Confidence 33 566666554 3348999999999 47899999999999999999864321 12344566778888887
Q ss_pred cccccccchhHHHHHHHHHHHHCCcee--eeeecccc--cccHHHHHHHhhcCcccceEEEE
Q 019012 286 FLQSDYLHLYPRFLDYVISNYKQGKIV--YVEDMNEG--LENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~--l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
+... ...++.++++++++.+. +.+...|+ ++++++|++.+.+++..+|+++.
T Consensus 308 ~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 308 VFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred eccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 6542 24678899999999886 33455644 48999999999888777899885
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=255.16 Aligned_cols=314 Identities=29% Similarity=0.383 Sum_probs=256.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|+|+++..+ +.+. .+.+ .+.+ |.+.. +++++||+.++++|+.|.....+.+.....+|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~--~~~~-~~~~~--~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v 69 (323)
T cd08241 1 MKAVVCKEL--GGPE--DLVL--EEVP-PEPGA--PGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAG--VV 69 (323)
T ss_pred CeEEEEecC--CCcc--eeEE--ecCC-CCCCC--CCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEE--EE
Confidence 588888876 5443 4444 3345 55543 59999999999999999988777553334457789999887 99
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+.+|+++..+++||+|+++ |+|++|+.++.+. ++++ |++ ++.. ++++..++.+|++++.....+.++++++
T Consensus 70 ~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vl 144 (323)
T cd08241 70 EAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAA-VFPL-PDG---LSFEEAAALPVTYGTAYHALVRRARLQPGETVL 144 (323)
T ss_pred EEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHH-ceeC-CCC---CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence 9999999999999999996 6999999999988 9999 998 7764 6778999999999997778899999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLD 241 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~ 241 (347)
|+|++|++|++++++|+..|++|++++.++++.+.++ ++|++.+++.... ++.+.+++.+.+ ++|.+++++|+....
T Consensus 145 i~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~ 222 (323)
T cd08241 145 VLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFE 222 (323)
T ss_pred EEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHH
Confidence 9999999999999999999999999999999999998 8998888888775 777888888776 899999999998888
Q ss_pred HHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc----cchhHHHHHHHHHHHHCCceeeeeec
Q 019012 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY----LHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
.++++++++|+++.++..... .........+.+++++.+.....+ +....+.++++++++.++.+.+....
T Consensus 223 ~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (323)
T cd08241 223 ASLRSLAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSA 297 (323)
T ss_pred HHHHhhccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccce
Confidence 999999999999999864321 111223345667888887665433 22235678889999999998877777
Q ss_pred ccccccHHHHHHHhhcCcccceEEEE
Q 019012 318 NEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.++++++.++++.+.++...+|++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 298 VFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred EEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 78999999999999887777788763
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=257.79 Aligned_cols=285 Identities=21% Similarity=0.241 Sum_probs=228.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + +++++ ++|.|.+. ++||+||+.++++|+.|...+.|.+ ..|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~-----~~~~~--~~~~p~~~---~~~vlV~v~a~~i~~~d~~~~~g~~----~~~~~~G~e~~G--~V 62 (319)
T cd08242 1 MKALVLDGG--L-----DLRVE--DLPKPEPP---PGEALVRVLLAGICNTDLEIYKGYY----PFPGVPGHEFVG--IV 62 (319)
T ss_pred CeeEEEeCC--C-----cEEEE--ECCCCCCC---CCeEEEEEEEEEEccccHHHHcCCC----CCCCccCceEEE--EE
Confidence 589999764 3 34554 57777664 9999999999999999998887744 257899999888 99
Q ss_pred EEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhhh
Q 019012 87 KVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYHI 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~ 135 (347)
+++|++ +++||+|.. .|+|++|+.+++++ ++++ |++ ++.+.
T Consensus 63 v~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~---~~~~~ 134 (319)
T cd08242 63 EEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLEN-LHVV-PDL---VPDEQ 134 (319)
T ss_pred EEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHH-eEEC-cCC---CCHHH
Confidence 999987 679999962 27899999999998 9999 999 77754
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+++..+..++|.++ +..+++++++|||+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.+++++. .
T Consensus 135 aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~--~ 209 (319)
T cd08242 135 AVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEA--E 209 (319)
T ss_pred hhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCccc--c
Confidence 44335566677665 778899999999997 699999999999999999999999999999999 799988776643 1
Q ss_pred HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccch
Q 019012 216 LVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL 294 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
..++++|++|||+|+ ..++.++++++++|+++..+.... ....+...+..++.++.+.....
T Consensus 210 -------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~---- 272 (319)
T cd08242 210 -------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP---- 272 (319)
T ss_pred -------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc----
Confidence 122389999999987 578999999999999998765432 12334556677888887765433
Q ss_pred hHHHHHHHHHHHHCCce--eeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 295 YPRFLDYVISNYKQGKI--VYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i--~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+++++++++++.+ .+.+...++++++++||+.+.++. .+|+||++
T Consensus 273 ----~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 273 ----FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred ----HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 7888899999999 455677889999999999998765 47988863
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=254.84 Aligned_cols=296 Identities=21% Similarity=0.244 Sum_probs=237.9
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.+. +.+....+.+.+ .+.|.+ + ++||+||+.++++|+.|+..+.|.+. ....|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~~~~~~~~~--~~~~~~-~--~~ev~irv~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G--~V 70 (329)
T cd08298 1 MKAMVLEKP--GPIEENPLRLTE--VPVPEP-G--PGEVLIKVEACGVCRTDLHIVEGDLP-PPKLPLIPGHEIVG--RV 70 (329)
T ss_pred CeEEEEecC--CCCCCCCceEEe--ccCCCC-C--CCEEEEEEEEEeccHHHHHHHhCCCC-CCCCCccccccccE--EE
Confidence 688999887 755434556654 455555 4 99999999999999999988877542 23447899999777 99
Q ss_pred EEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+.+|++++++++||+|++ .|+|++|+.++.+. ++++ |++ +++.
T Consensus 71 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~---~~~~~ 145 (329)
T cd08298 71 EAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF-AYPI-PED---YDDEE 145 (329)
T ss_pred EEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchh-EEEC-CCC---CCHHH
Confidence 999999999999999975 37899999999988 9999 999 7774
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
++.++.++.|||+++ ..+++++++++||+| +|++|++++++++..|++|+++++++++.+.++ ++|++.+++.+.
T Consensus 146 ~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-- 220 (329)
T cd08298 146 AAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDD-- 220 (329)
T ss_pred hhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCc--
Confidence 789999999999999 889999999999997 599999999999999999999999999999998 999987777654
Q ss_pred HHHHHHHHHCCCCccEEEeCCC-hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc
Q 019012 215 DLVAALKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
. ..+++|+++++++ +..++.++++++++|+++.+|.... ....... ..+.++..+.+.....
T Consensus 221 ~--------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~-~~~~~~~~i~~~~~~~--- 283 (329)
T cd08298 221 L--------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDY-ELLWGEKTIRSVANLT--- 283 (329)
T ss_pred c--------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccch-hhhhCceEEEEecCCC---
Confidence 1 1237999999865 4688999999999999998874321 1111222 2234555665554332
Q ss_pred hhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 294 LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 294 ~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.+.+++++++++++.+++. ...++++++++|++.+.+++..+|+|+
T Consensus 284 --~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 284 --RQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --HHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 5668889999999988874 466799999999999999888888764
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=252.55 Aligned_cols=271 Identities=26% Similarity=0.378 Sum_probs=223.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
||++++.+. + + ..+.+ .++|.|.+ . +++|+|||.++++|+.|+....+.+. ....|.++|+|++| +|
T Consensus 1 ~~~~~~~~~--~-~--~~~~~--~~~~~p~~-~--~~~v~V~v~~~~l~~~d~~~~~g~~~-~~~~p~~~G~e~~G--~V 67 (306)
T cd08258 1 MKALVKTGP--G-P--GNVEL--REVPEPEP-G--PGEVLIKVAAAGICGSDLHIYKGDYD-PVETPVVLGHEFSG--TI 67 (306)
T ss_pred CeeEEEecC--C-C--CceEE--eecCCCCC-C--CCeEEEEEEEEEechhhHHHHcCCCC-cCCCCeeeccceEE--EE
Confidence 478887664 3 2 23455 45777765 4 99999999999999999988877542 23447899999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCCChhhhh
Q 019012 87 KVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHI 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~ 135 (347)
+.+|++++.|++||+|++. |+|++|+.++++. ++++ |++ ++++.
T Consensus 68 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~---~~~~~ 142 (306)
T cd08258 68 VEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEES-LHEL-PEN---LSLEA 142 (306)
T ss_pred EEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHH-eEEC-cCC---CCHHH
Confidence 9999999999999999874 7899999999998 9999 999 78765
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE--CChHhHHHHHHHcCCCeeeecCCH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA--GSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~--~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
++++..+++||+++...++++++++|||.| +|++|++++|+|+..|++|++++ +++++.+.++ ++|++++ +++..
T Consensus 143 aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~ 219 (306)
T cd08258 143 AALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE 219 (306)
T ss_pred HHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC
Confidence 558889999999998888999999999976 69999999999999999988763 3455777778 8999878 87766
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
++.+.+++.+.+ ++|++||++|+ ..+...+++|+++|+++.+|..... ........++++++++.|+.+..
T Consensus 220 -~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~- 292 (306)
T cd08258 220 -DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERIIQKELSVIGSRSST- 292 (306)
T ss_pred -CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHHhhcCcEEEEEecCc-
Confidence 788888887776 89999999975 6888999999999999999986531 12445566778999999998876
Q ss_pred cchhHHHHHHHHHHHHCC
Q 019012 292 LHLYPRFLDYVISNYKQG 309 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g 309 (347)
.++++++++++++|
T Consensus 293 ----~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 ----PASWETALRLLASG 306 (306)
T ss_pred ----hHhHHHHHHHHhcC
Confidence 56699999998875
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=255.42 Aligned_cols=289 Identities=23% Similarity=0.298 Sum_probs=228.8
Q ss_pred CeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccc-cCCC-CCCCCCCCCCCceecceEEEEeccCCCCCCCCCE
Q 019012 24 DMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMR-SSFT-SSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDL 101 (347)
Q Consensus 24 ~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~-~~~~-~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~ 101 (347)
++.+++ .|.|.+ + ++||+|||.++++|++|+.... +.+. ....+|.++|||++| +|+++|++++.|++||+
T Consensus 8 ~~~~~~--~~~p~l-~--~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G--~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 8 DLRVEE--RPAPEP-G--PGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSG--VVEAVGPGVTGLAPGQR 80 (339)
T ss_pred ceEEEE--cCCCCC-C--CCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceE--EEEeeCCCCCcCCCCCE
Confidence 445655 566655 4 9999999999999999987663 3221 112357899999888 99999999999999999
Q ss_pred EEE-----------------------------------ecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHH
Q 019012 102 VAG-----------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAY 146 (347)
Q Consensus 102 V~~-----------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~ 146 (347)
|++ .|+|++|+.++++. ++++ |++ ++.+.|++..++++||
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~i-P~~---~~~~~aa~~~~~~~a~ 155 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQ-CVPL-PDG---LSLRRAALAEPLAVAL 155 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHH-eEEC-cCC---CCHHHhhhcchHHHHH
Confidence 986 27899999999998 9999 999 8876455578899999
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC-
Q 019012 147 AGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF- 224 (347)
Q Consensus 147 ~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~- 224 (347)
+++...... ++++|||.| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++++++++.. + +++..
T Consensus 156 ~~l~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~----~~~~~~ 227 (339)
T cd08232 156 HAVNRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-P----LAAYAA 227 (339)
T ss_pred HHHHhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-h----hhhhhc
Confidence 999665555 999999987 59999999999999999 8999998888888888 8999899988764 4 22222
Q ss_pred C-CCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHH
Q 019012 225 P-QGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYV 302 (347)
Q Consensus 225 ~-g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (347)
. +++|++||+.|+ ..++..+++|+++|+++.+|.... . .......++.+++++.+... ..+.++++
T Consensus 228 ~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 295 (339)
T cd08232 228 DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG-----P-VPLPLNALVAKELDLRGSFR------FDDEFAEA 295 (339)
T ss_pred cCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-ccCcHHHHhhcceEEEEEec------CHHHHHHH
Confidence 2 269999999995 578999999999999999986431 1 12233344667777766542 24568889
Q ss_pred HHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 303 ISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 303 ~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
++++.+|.+++. +..++++++++++++.+.++...+|+|+++
T Consensus 296 ~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 296 VRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 999999988643 566789999999999999888788999864
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=250.00 Aligned_cols=318 Identities=28% Similarity=0.419 Sum_probs=249.6
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
|++.+..+ +.+ ..+.+.+ .+.|.+ . +++++||+.++++|+.|...+.+.+......|.++|||++| +|+
T Consensus 1 ~~~~~~~~--~~~--~~~~~~~--~~~~~~-~--~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~ 69 (337)
T cd08275 1 RAVVLTGF--GGL--DKLKVEK--EALPEP-S--SGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAG--TVE 69 (337)
T ss_pred CeEEEcCC--CCc--cceEEEe--cCCCCC-C--CCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEE--EEE
Confidence 45666655 544 2445544 555555 4 99999999999999999988877553333457889999887 999
Q ss_pred EeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEE
Q 019012 88 VVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFV 163 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI 163 (347)
.+|+++.++++||+|+++ |+|++|+.++.+. ++++ |++ ++.+ ++.++.++++||+++....+++++++|+|
T Consensus 70 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli 144 (337)
T cd08275 70 AVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQ-VFPL-PDG---MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLV 144 (337)
T ss_pred EECCCCcCCCCCCEEEEecCCCeeeeEEEecHHH-eEEC-CCC---CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEE
Confidence 999999999999999997 7899999999988 9999 998 7764 67888999999999988889999999999
Q ss_pred EcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019012 164 SAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242 (347)
Q Consensus 164 ~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~ 242 (347)
+|++|++|++++++|+.. +..++... ++++.+.++ .+|++.+++.+.. ++...+++.+++++|+++||.|+.....
T Consensus 145 ~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~ 221 (337)
T cd08275 145 HSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRK 221 (337)
T ss_pred EcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHH
Confidence 999999999999999998 44443332 455778887 8999888888775 7777888877568999999999988899
Q ss_pred HHHhhhcCCeEEEEcccccccCCC-C----------CCccchHHHhhcceEeeccccccc---cchhHHHHHHHHHHHHC
Q 019012 243 ALLNMRDHGRIAVCGMVSLHSYHD-P----------QGIHNLFTLVTKRITMKGFLQSDY---LHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 243 ~~~~l~~~G~~v~~g~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 308 (347)
++++++++|+++.+|.....+... . ........++.+++++.++..... .......+.++++++.+
T Consensus 222 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (337)
T cd08275 222 SYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEE 301 (337)
T ss_pred HHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHC
Confidence 999999999999998654321000 0 011122456778888887765322 11223567889999999
Q ss_pred CceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 309 GKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 309 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.+++.....+++++++++++.+.+++..+|+++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 302 GKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred CCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 998887777889999999999999888888988864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=250.42 Aligned_cols=297 Identities=25% Similarity=0.312 Sum_probs=239.6
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
||+++.+. |. ++++. ++|.|.+ . +++++||+.++++|+.|...+.+.+. ....|.++|||++| +|+
T Consensus 1 ~~~~~~~~--~~----~~~~~--~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G--~v~ 66 (330)
T cd08245 1 KAAVVHAA--GG----PLEPE--EVPVPEP-G--PGEVLIKIEACGVCHTDLHAAEGDWG-GSKYPLVPGHEIVG--EVV 66 (330)
T ss_pred CeEEEecC--CC----CceEE--eccCCCC-C--CCeEEEEEEEEeccHHHHHHHcCCCC-CCCCCcccCccceE--EEE
Confidence 57788776 42 34564 4666755 4 99999999999999999988877653 23457899999877 999
Q ss_pred EeccCCCCCCCCCEEE----------------------------E---ecCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 88 VVDSDNPNFKPGDLVA----------------------------G---LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~----------------------------~---~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
.+|+++++|++||+|+ + .|+|++|+.++++. ++++ |++ +++. +
T Consensus 67 ~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~---~~~~~~ 141 (330)
T cd08245 67 EVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY-TVLL-PDG---LPLAQA 141 (330)
T ss_pred EECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHH-eEEC-CCC---CCHHHh
Confidence 9999999999999998 2 37899999999988 9999 999 7774 7
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
+.++..+++||+++.. .++.++++|||+|+ |++|++++++|+..|++|+++++++++.+.++ ++|++.+++.... +
T Consensus 142 ~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~ 217 (330)
T cd08245 142 APLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-L 217 (330)
T ss_pred hhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-c
Confidence 7889999999999955 78999999999975 88999999999999999999999999999998 8998888877653 3
Q ss_pred HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccch
Q 019012 216 LVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL 294 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.... ..+++|++||+.+. .....++++++++|+++.++..... ........++.++.++.++....
T Consensus 218 ~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---- 284 (330)
T cd08245 218 DEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG---- 284 (330)
T ss_pred hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC----
Confidence 3222 22479999999874 6788999999999999999865332 11222344666777777766543
Q ss_pred hHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 295 YPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.+.++++++++.++.+.+ ....+++++++++++.+.+++..+|+|+
T Consensus 285 -~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 -RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred -HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 567888999999999876 4456799999999999998888888764
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=247.23 Aligned_cols=299 Identities=28% Similarity=0.419 Sum_probs=240.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--CCCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--SSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--~~~~~p~i~G~e~~G~g 84 (347)
||++++..+ |.+. .+...+.+.|.+ + +++|+||+.++++|+.|+....+.+. .....|.++|||++|
T Consensus 1 ~~~~~~~~~--~~~~----~~~~~~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G-- 69 (309)
T cd05289 1 MKAVRIHEY--GGPE----VLELADVPTPEP-G--PGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAG-- 69 (309)
T ss_pred CceEEEccc--CCcc----ceeecccCCCCC-C--CCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeE--
Confidence 678888876 6553 233445666645 4 99999999999999999988777442 123348899999887
Q ss_pred EEEEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+|+.+|++++.+++||+|+++ |+|++|+.++... ++++ |++ +++. ++.++..+.++++++.....+.+
T Consensus 70 ~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 144 (309)
T cd05289 70 VVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADE-LALK-PAN---LSFEEAAALPLAGLTAWQALFELGGLKA 144 (309)
T ss_pred EEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHH-hccC-CCC---CCHHHHHhhhHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999985 6999999999988 9999 998 6764 67888899999999977777999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
++++||+|++|.+|++++++++..|++|+++++++ +.+.++ ++|++.+++.+.. ++.+ .+.+ ++|++||+++
T Consensus 145 ~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~~~ 217 (309)
T cd05289 145 GQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDTVG 217 (309)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEECCc
Confidence 99999999989999999999999999999998877 788887 8998888887764 4433 3333 7999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
+.....++++++++|+++.+|..... .. ....++.++...... +. .+.++++++++.++.+.+.+.
T Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~-------~~---~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~ 283 (309)
T cd05289 218 GETLARSLALVKPGGRLVSIAGPPPA-------EQ---AAKRRGVRAGFVFVE--PD--GEQLAELAELVEAGKLRPVVD 283 (309)
T ss_pred hHHHHHHHHHHhcCcEEEEEcCCCcc-------hh---hhhhccceEEEEEec--cc--HHHHHHHHHHHHCCCEEEeec
Confidence 98899999999999999999864321 00 233445555544332 11 567899999999999988777
Q ss_pred cccccccHHHHHHHhhcCcccceEEE
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
..+++++++++++.+.+++..+|+++
T Consensus 284 ~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 284 RVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 78899999999999988877777764
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=245.80 Aligned_cols=283 Identities=24% Similarity=0.286 Sum_probs=234.3
Q ss_pred CcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe--cCcceeEEeeccccc
Q 019012 43 GAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL--TGWEEYSLIRKTEQL 120 (347)
Q Consensus 43 ~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~ 120 (347)
+|++||+.++++|+.|+....+.+ ..+|.++|||++| +|+++|+++++|++||+|+++ |+|++|+.++.+. +
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e~~G--~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~ 74 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLECSG--IVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARL-V 74 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC---CCCCCccceeeeE--EEEeecCCccCCCCCCEEEEEecCcccceEEechhh-e
Confidence 489999999999999998887743 2457899999888 999999999999999999998 7999999999998 9
Q ss_pred eecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 121 RKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 121 ~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
+++ |++ +++. ++.++.++.++|+++.+...+++|++++|+|++|++|++++|+++..|++|+++++++++.+.++
T Consensus 75 ~~~-p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 150 (293)
T cd05195 75 VKI-PDS---LSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR 150 (293)
T ss_pred EeC-CCC---CCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 999 988 7774 67788999999999988889999999999999999999999999999999999999999999998
Q ss_pred HHcC--CCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHH
Q 019012 200 NKLG--FDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTL 276 (347)
Q Consensus 200 ~~~g--~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 276 (347)
.++ ++.+++.+.. ++.+.+++.+.+ ++|+++|++++..+..++++++++|+++.+|.....+. .... ...
T Consensus 151 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~-~~~ 223 (293)
T cd05195 151 -ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN----SKLG-MRP 223 (293)
T ss_pred -HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC----Cccc-hhh
Confidence 777 6788888776 788888888876 89999999998899999999999999999987543210 0111 122
Q ss_pred hhcceEeeccccccc----cchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 277 VTKRITMKGFLQSDY----LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 277 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
+.+++++........ +....+.+.++++++.++.+++.....+++++++++++.+..++..+|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 224 FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 334445444332221 233456788899999999998777777899999999999998877777764
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=238.39 Aligned_cols=278 Identities=24% Similarity=0.311 Sum_probs=228.4
Q ss_pred EEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe--cCcceeEEeeccccceecC
Q 019012 47 VKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL--TGWEEYSLIRKTEQLRKIQ 124 (347)
Q Consensus 47 V~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~ 124 (347)
||+.++++|+.|+..+.+.+ ..|.++|||++| +|+++|++++.|++||+|+++ |+|++|+.++.+. ++++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~----~~~~~~g~e~~G--~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~- 73 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL----PGEAVLGGECAG--VVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARL-VVPI- 73 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC----CCCCCCCceeEE--EEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHH-eEEC-
Confidence 89999999999998887743 236889999887 999999999999999999997 8999999999988 9999
Q ss_pred CCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC
Q 019012 125 PDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 203 (347)
Q Consensus 125 p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g 203 (347)
|++ +++. ++.++..+.++++++.+...+.+|++|+|+|++|++|++++++++..|++|+++++++++.+.++ ++|
T Consensus 74 p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g 149 (288)
T smart00829 74 PDG---LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELG 149 (288)
T ss_pred CCC---CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC
Confidence 999 7775 77888899999999978888999999999999999999999999999999999999999999998 999
Q ss_pred C--CeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcc
Q 019012 204 F--DEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKR 280 (347)
Q Consensus 204 ~--~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
+ +.+++++.. ++.+.+++.+.+ ++|+++|++++.....++++++++|+++.+|...... ........ +.++
T Consensus 150 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~~-~~~~ 223 (288)
T smart00829 150 IPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMAP-FRRN 223 (288)
T ss_pred CChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchhh-hcCC
Confidence 8 778888776 777788887776 8999999999888889999999999999998653210 01112222 3455
Q ss_pred eEeecccccc---ccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 281 ITMKGFLQSD---YLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 281 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
+++.+..... .+....+.+.++++++.++.+.+.....++++++.++++.+..+...+|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 224 VSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred ceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 5554443321 1222345678888999999888765666799999999999998876677763
|
Enoylreductase in Polyketide synthases. |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=240.91 Aligned_cols=293 Identities=28% Similarity=0.348 Sum_probs=225.2
Q ss_pred EEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe
Q 019012 28 KISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL 105 (347)
Q Consensus 28 ~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~ 105 (347)
...+.|.|.+ + +++|+|++.++++|+.|...+.|.+.. ....|.++|||++| +|.++|++++++++||+|+++
T Consensus 15 ~~~~~~~~~~-~--~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G--~v~~~G~~v~~~~~Gd~V~~~ 89 (319)
T cd08267 15 LEVEVPIPTP-K--PGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAG--EVVAVGSGVTRFKVGDEVFGR 89 (319)
T ss_pred ccccCCCCCC-C--CCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeE--EEEEeCCCCCCCCCCCEEEEe
Confidence 4556777766 4 999999999999999999887764411 12346789999887 999999999999999999985
Q ss_pred ------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 019012 106 ------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLA 178 (347)
Q Consensus 106 ------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la 178 (347)
|+|++|+.++.+. ++++ |++ ++.+ ++.++..+.+||+++.....++++++++|+|++|++|++++++|
T Consensus 90 ~~~~~~g~~~~~~~~~~~~-~~~i-p~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la 164 (319)
T cd08267 90 LPPKGGGALAEYVVAPESG-LAKK-PEG---VSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIA 164 (319)
T ss_pred ccCCCCceeeEEEEechhh-eEEC-CCC---CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 6899999999988 9999 999 7774 78899999999999987777999999999999999999999999
Q ss_pred HHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh--hHHHHHHhhhcCCeEEE
Q 019012 179 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE--MLDAALLNMRDHGRIAV 255 (347)
Q Consensus 179 ~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~--~~~~~~~~l~~~G~~v~ 255 (347)
+..|++|++++++ ++.+.++ ++|++++++.... ++. +..+.+ ++|++++|+++. .....+..++++|+++.
T Consensus 165 ~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~ 238 (319)
T cd08267 165 KALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVS 238 (319)
T ss_pred HHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEE
Confidence 9999999998865 7788887 8999888887654 433 334444 899999999853 33444445999999999
Q ss_pred EcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCc
Q 019012 256 CGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGK 335 (347)
Q Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 335 (347)
+|.....................+... .... .+. .+.++++++++.++.+.+.+...+++++++++++.+.+++
T Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~ 312 (319)
T cd08267 239 VGGGPSGLLLVLLLLPLTLGGGGRRLK--FFLA--KPN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGR 312 (319)
T ss_pred eccccccccccccccchhhccccceEE--EEEe--cCC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCC
Confidence 987543210000000000111112222 1111 111 6779999999999999988778889999999999999877
Q ss_pred ccceEEE
Q 019012 336 NVGKQVV 342 (347)
Q Consensus 336 ~~gk~vv 342 (347)
..+|+++
T Consensus 313 ~~~~vvv 319 (319)
T cd08267 313 ARGKVVI 319 (319)
T ss_pred CCCcEeC
Confidence 7777764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=237.08 Aligned_cols=228 Identities=19% Similarity=0.219 Sum_probs=187.3
Q ss_pred CCCCceecceEEEEeccCCC------CCCCCCEEEE-------------------------------------ecCccee
Q 019012 75 VPGQPVEGFGVSKVVDSDNP------NFKPGDLVAG-------------------------------------LTGWEEY 111 (347)
Q Consensus 75 i~G~e~~G~g~v~~vg~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~ 111 (347)
++|||++| +|+++|++|+ +|++||||+. .|+|+||
T Consensus 1 v~GHE~~G--~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey 78 (280)
T TIGR03366 1 VLGHEIVG--EVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEH 78 (280)
T ss_pred CCCcccce--EEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceee
Confidence 58999888 9999999999 8999999964 1688999
Q ss_pred EEeecc-ccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEE
Q 019012 112 SLIRKT-EQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGS 188 (347)
Q Consensus 112 ~~v~~~-~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~ 188 (347)
+.+|++ . ++++ |++ ++++ ++.++..+.|||+++.+ ....++++|||+|+ |++|++++|+|+.+|++ |+++
T Consensus 79 ~~v~~~~~-~~~l-P~~---~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~ 151 (280)
T TIGR03366 79 CHLPAGTA-IVPV-PDD---LPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAA 151 (280)
T ss_pred EEecCCCc-EEEC-CCC---CCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence 999987 6 9999 999 7875 77788889999999954 55679999999986 99999999999999995 9999
Q ss_pred ECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCC
Q 019012 189 AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHD 266 (347)
Q Consensus 189 ~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 266 (347)
+.+++|.+.++ ++|++.++++++ ..+.+++.+.+ ++|++||++|. ..++.++++++++|+++.+|.....
T Consensus 152 ~~~~~r~~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---- 223 (280)
T TIGR03366 152 DPSPDRRELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG---- 223 (280)
T ss_pred CCCHHHHHHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----
Confidence 88999999999 999998888753 34556677766 89999999986 5789999999999999999975321
Q ss_pred CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCC--cee--eeeecccccccH
Q 019012 267 PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQG--KIV--YVEDMNEGLENA 324 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~i~--~~~~~~~~l~~~ 324 (347)
.....+...++.+++++.|+.... .+.++++++++.++ .+. ..++.+|+|+|+
T Consensus 224 ~~~~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 224 GPVALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CceeeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 112445678889999999987654 56689999999874 433 345666788763
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=253.20 Aligned_cols=297 Identities=21% Similarity=0.253 Sum_probs=251.9
Q ss_pred EEEEeecccC--CCCCCCCCcEEEEEEEeecChhcccccccCCCCCCC------CCCCCCCceecceEEEEeccCCCCCC
Q 019012 26 EIKISGIQLK--APKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYI------PPFVPGQPVEGFGVSKVVDSDNPNFK 97 (347)
Q Consensus 26 ~~~~~~~~~p--~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~------~p~i~G~e~~G~g~v~~vg~~v~~~~ 97 (347)
.++..+.|.. .|.. ++.=+.-|.|+.||..|+....|+.....- ...++|-||+| +.+
T Consensus 1428 SlrWies~~~~a~~~~--~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsG------------Rd~ 1493 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTC--PGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSG------------RDA 1493 (2376)
T ss_pred ceeeeecchhhcCCCC--CCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecc------------ccC
Confidence 3555555544 2333 788899999999999999988886643322 25667777777 257
Q ss_pred CCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 019012 98 PGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQL 173 (347)
Q Consensus 98 ~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ 173 (347)
-|.||+++ -+.++.+.++.+. +|.+ |+. ++.+ +++.|+.|.|||+||..++..++|+++||++|+|++|++
T Consensus 1494 ~GrRvM~mvpAksLATt~l~~rd~-lWev-P~~---WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQA 1568 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDF-LWEV-PSK---WTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQA 1568 (2376)
T ss_pred CCcEEEEeeehhhhhhhhhcchhh-hhhC-Ccc---cchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHH
Confidence 89999998 5788899999888 9999 999 8886 889999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEEEECChHhHHHHHHHcCC---CeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhc
Q 019012 174 VGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRD 249 (347)
Q Consensus 174 ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~ 249 (347)
||.+|.++|++|+.|+.|.+|++++.+.|.- .++-|+++. +|.+-+...|.| |+|+|+++...+.++.+++||+.
T Consensus 1569 AIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~ 1647 (2376)
T KOG1202|consen 1569 AIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLAL 1647 (2376)
T ss_pred HHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHh
Confidence 9999999999999999999999999866543 567788887 999999999999 99999999999999999999999
Q ss_pred CCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHH----CCceeeeeecccccccHH
Q 019012 250 HGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYK----QGKIVYVEDMNEGLENAP 325 (347)
Q Consensus 250 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~g~i~~~~~~~~~l~~~~ 325 (347)
+|||..+|..+.++ -....+..+.+|.+++|....+..+...+.+.++..+++ +|.++|.+..+|+-.+++
T Consensus 1648 ~GRFLEIGKfDLSq-----NspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE 1722 (2376)
T KOG1202|consen 1648 HGRFLEIGKFDLSQ-----NSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVE 1722 (2376)
T ss_pred cCeeeeecceeccc-----CCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHH
Confidence 99999999876642 245567889999999999887775555556666666555 588999999999999999
Q ss_pred HHHHHhhcCcccceEEEEecCC
Q 019012 326 AAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 326 ~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
+||+.|.+++.+||+||++-+|
T Consensus 1723 ~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1723 DAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred HHHHHHhccCccceEEEEEccc
Confidence 9999999999999999998654
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-30 Score=226.17 Aligned_cols=241 Identities=32% Similarity=0.396 Sum_probs=200.6
Q ss_pred cEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe------------------
Q 019012 44 AFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL------------------ 105 (347)
Q Consensus 44 ~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~------------------ 105 (347)
||+|||.++++|+.|+..+.+.+.....+|.++|||++| +|+++|++++.|++||+|+++
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G--~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 78 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAG--VVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG 78 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEE--EEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence 689999999999999988887553234457899999887 999999999999999999974
Q ss_pred --------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 019012 106 --------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQ 176 (347)
Q Consensus 106 --------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~ 176 (347)
|+|++|+.++.+. ++++ |++ ++++ ++.++.++.+||+++.....+.++++|||+|+.+ +|+++++
T Consensus 79 ~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~---~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~ 152 (271)
T cd05188 79 GILGEGLDGGFAEYVVVPADN-LVPL-PDG---LSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQ 152 (271)
T ss_pred CEeccccCCcceEEEEechHH-eEEC-CCC---CCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHH
Confidence 6899999999998 9999 999 7775 7788899999999997777779999999999866 9999999
Q ss_pred HHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEE
Q 019012 177 LAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIA 254 (347)
Q Consensus 177 la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v 254 (347)
+++..|.+|+++++++++.+.++ ++|+++++++... +....+. .+.+ ++|++|+++++ .....++++++++|+++
T Consensus 153 ~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v 229 (271)
T cd05188 153 LAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIV 229 (271)
T ss_pred HHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEE
Confidence 99999999999999999999998 8998888887765 5655665 4444 89999999998 78899999999999999
Q ss_pred EEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHH
Q 019012 255 VCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISN 305 (347)
Q Consensus 255 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (347)
.++...... ........+.+++++.++.... .+.+++++++
T Consensus 230 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 270 (271)
T cd05188 230 VVGGTSGGP-----PLDDLRRLLFKELTIIGSTGGT-----REDFEEALDL 270 (271)
T ss_pred EEccCCCCC-----CcccHHHHHhcceEEEEeecCC-----HHHHHHHHhh
Confidence 999765421 1222456788899999887755 3345555544
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=211.28 Aligned_cols=247 Identities=27% Similarity=0.325 Sum_probs=195.8
Q ss_pred CCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHH
Q 019012 70 YIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAG 148 (347)
Q Consensus 70 ~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~a 148 (347)
.++|.++|||++| +|+++|+++++|++||+|++++.|++|+.++.+. ++++ |++ +++. ++.+ .++++||++
T Consensus 18 ~~~p~v~g~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~-~~~i-p~~---l~~~~aa~~-~~~~ta~~~ 89 (277)
T cd08255 18 LPLPLPPGYSSVG--RVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANL-LVPL-PDG---LPPERAALT-ALAATALNG 89 (277)
T ss_pred CcCCcccCcceeE--EEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHH-eeEC-cCC---CCHHHhHHH-HHHHHHHHH
Confidence 4578999999887 9999999999999999999999999999999988 9999 998 7764 5555 789999999
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcC-CCeeeecCCHHHHHHHHHHHCCC
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLG-FDEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~i~~~~~g 226 (347)
+ ...++++++++||+| .|++|++++++|+.+|++ |+++++++++.+.++ ++| .+.+++..+. ...++
T Consensus 90 ~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--------~~~~~ 158 (277)
T cd08255 90 V-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--------EIGGR 158 (277)
T ss_pred H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--------hhcCC
Confidence 8 468999999999997 599999999999999997 999999999999888 898 4555544321 11223
Q ss_pred CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc----c---chhHHH
Q 019012 227 GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY----L---HLYPRF 298 (347)
Q Consensus 227 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~ 298 (347)
++|++||+++. .....++++++++|+++.+|..... .......+..++.++.+...... + ....+.
T Consensus 159 ~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (277)
T cd08255 159 GADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARN 232 (277)
T ss_pred CCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeeccccccccccccccccccc
Confidence 79999999885 6788999999999999999875432 11112234445556666554322 0 122367
Q ss_pred HHHHHHHHHCCceeeeeecccccccHHHHHHHhhcC-cccceEE
Q 019012 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSG-KNVGKQV 341 (347)
Q Consensus 299 ~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~-~~~gk~v 341 (347)
++++++++.++.+++.+...+++++++++++.+.++ ....|++
T Consensus 233 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 233 LEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred HHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 899999999999988777788999999999999876 2334654
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.2e-18 Score=132.93 Aligned_cols=127 Identities=32% Similarity=0.498 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC-hhhHHHHHHh
Q 019012 169 AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG-GEMLDAALLN 246 (347)
Q Consensus 169 ~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g-~~~~~~~~~~ 246 (347)
++|++++|+|++.|++|++++++++|++.++ ++|+++++++++. ++.+++++++++ ++|++|||+| .+.++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 5899999999999999999999999999999 9999999999987 899999999998 9999999999 6899999999
Q ss_pred hhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHH
Q 019012 247 MRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYK 307 (347)
Q Consensus 247 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (347)
++++|+++.+|.+.. .....+...++.+++++.|+...+ .+.+++++++++
T Consensus 79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 999999999998762 234677889999999999999887 666777777765
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.4e-18 Score=127.83 Aligned_cols=79 Identities=23% Similarity=0.209 Sum_probs=67.7
Q ss_pred CCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe----------------
Q 019012 42 SGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL---------------- 105 (347)
Q Consensus 42 ~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~---------------- 105 (347)
|+||||||.+++||++|++.+.+........|.++|||++| +|+++|+++++|++||+|++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVG--VVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEE--EEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceee--eeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 68999999999999999999998654557789999999888 999999999999999999863
Q ss_pred --------------cCcceeEEeeccccceec
Q 019012 106 --------------TGWEEYSLIRKTEQLRKI 123 (347)
Q Consensus 106 --------------g~~~~~~~v~~~~~~~~i 123 (347)
|+|+||+.+|+++ ++++
T Consensus 79 ~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLGLDGGFAEYVVVPARN-LVPV 109 (109)
T ss_dssp GGTTTBEETTTSSTCSSBSEEEEEGGG-EEEE
T ss_pred ccCCCCCEeEcCCCCcccCeEEEehHH-EEEC
Confidence 6999999999888 8764
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-14 Score=111.69 Aligned_cols=123 Identities=32% Similarity=0.383 Sum_probs=80.4
Q ss_pred cCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC--hhhH-HHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhh
Q 019012 202 LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG--GEML-DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT 278 (347)
Q Consensus 202 ~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 278 (347)
||+++++||+.. ++ ...+++|+|||++| ++.+ ..++++| ++|++++++. .. .........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~--------~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DL--------PSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HH--------HHHHHHHHC
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cc--------cchhhhhcc
Confidence 689999999976 65 32358999999999 6544 7777888 9999999974 00 000011111
Q ss_pred cceEeecccc-ccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEE
Q 019012 279 KRITMKGFLQ-SDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 279 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
...++..... ... ....+.++++.+++++|+|++.+..+||++++++|++.+++++..||+||
T Consensus 64 ~~~~~~~~~~~~~~-~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPN-AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--H-HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCC-chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2222222210 100 22366799999999999999999999999999999999999999999986
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.6e-12 Score=114.03 Aligned_cols=176 Identities=13% Similarity=0.098 Sum_probs=129.7
Q ss_pred hHHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH
Q 019012 144 TAYAGFHEVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 144 ta~~al~~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
..|.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.|.+.++ .+|++. ++ ..+.+
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~~------~~e~v-- 255 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-MT------MEEAV-- 255 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-cc------HHHHH--
Confidence 34566655444 368999999996 99999999999999999999999999999998 899843 21 11222
Q ss_pred HCCCCccEEEeCCChh-hHHHH-HHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHH
Q 019012 223 CFPQGIDIYFDNVGGE-MLDAA-LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLD 300 (347)
Q Consensus 223 ~~~g~~d~vid~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (347)
.++|+||+|+|.. .+... +++++++|+++.+|.. ....+...+..+++++.++..... ...++
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~ 320 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELP 320 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcC
Confidence 2489999999974 56665 9999999999999953 134666778888888887765431 11244
Q ss_pred --HHHHHHHCCce-eee--eecc-----cccc-cHHHHHHHhhcCccc-ceEEEEec
Q 019012 301 --YVISNYKQGKI-VYV--EDMN-----EGLE-NAPAAFVGLFSGKNV-GKQVVRVA 345 (347)
Q Consensus 301 --~~~~~l~~g~i-~~~--~~~~-----~~l~-~~~~a~~~~~~~~~~-gk~vv~~~ 345 (347)
+.+.++.+|.+ +.. +... ++|+ |+.++++.+.+++.. .|+++.++
T Consensus 321 ~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 321 DGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred CcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 68999999988 433 3333 5788 999999988876542 46666543
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.8e-11 Score=113.48 Aligned_cols=150 Identities=14% Similarity=0.109 Sum_probs=109.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCH------------HHHHHHHH
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDE------------TDLVAALK 221 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~------------~~~~~~i~ 221 (347)
..++++|+|+|+ |++|+++++.|+.+|++|++++.++++++.++ ++|++.+ +|..+. .++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 468999999996 99999999999999999999999999999999 9999744 555331 02222333
Q ss_pred HH-CC--CCccEEEeCCChh------h-HHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhh-cceEeecccccc
Q 019012 222 RC-FP--QGIDIYFDNVGGE------M-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT-KRITMKGFLQSD 290 (347)
Q Consensus 222 ~~-~~--g~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 290 (347)
+. .. +++|++|+|++.+ . .+++++.++++|+++.++...+.++. .......++. +++++.|+...
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDL- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCC-
Confidence 32 32 3699999999852 4 49999999999999999975432211 1222334555 78998887642
Q ss_pred ccchhHHHHHHHHHHHHCCceeee
Q 019012 291 YLHLYPRFLDYVISNYKQGKIVYV 314 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~i~~~ 314 (347)
+ .+...+..+++.++.++..
T Consensus 316 -P---~~~p~~As~lla~~~i~l~ 335 (509)
T PRK09424 316 -P---SRLPTQSSQLYGTNLVNLL 335 (509)
T ss_pred -c---hhHHHHHHHHHHhCCccHH
Confidence 2 3444457888888877654
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.4e-06 Score=71.29 Aligned_cols=167 Identities=20% Similarity=0.222 Sum_probs=100.8
Q ss_pred EEEEeccCCCCCCCCCEEEEecCcceeEEeeccc---------------------cceecCCCCCCChhhh-hhhcCCh-
Q 019012 85 VSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTE---------------------QLRKIQPDHHIPLSYH-IGLLGMP- 141 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~---------------------~~~~i~p~~~~~~~~~-~a~l~~~- 141 (347)
..+++-|.+.++.+|.||+|+=..++|+.+.... ...++.++....-+.+ .-+|..+
T Consensus 38 fA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~~~~LlrPL 117 (314)
T PF11017_consen 38 FATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPEREDWQMLLRPL 117 (314)
T ss_pred EEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcchhHHHHHHHHH
Confidence 5666778999999999999984444444333221 0001100000000111 2233333
Q ss_pred hhhHHHHHHhhc---CCCCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEECChHhHHHHHHHcCC-CeeeecCCHHH
Q 019012 142 GFTAYAGFHEVC---SPKSGEYVFVSAASGAVGQLVGQLAK-LHGC-YVVGSAGSSQKVDLLKNKLGF-DEAFNYNDETD 215 (347)
Q Consensus 142 ~~ta~~al~~~~---~~~~~~~vLI~Ga~g~~G~~ai~la~-~~G~-~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~ 215 (347)
+.|.|.. .+.. ..-..+.|+|..|++-+++..+.+++ ..+. +++.+++..+ .+..+ .+|+ ++|+.|.+
T Consensus 118 f~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-~~Fve-~lg~Yd~V~~Yd~--- 191 (314)
T PF11017_consen 118 FITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-VAFVE-SLGCYDEVLTYDD--- 191 (314)
T ss_pred HHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-hhhhh-ccCCceEEeehhh---
Confidence 3444433 2221 12345789999999999999998888 4444 8998885554 47888 9998 78888864
Q ss_pred HHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCC-eEEEEccccc
Q 019012 216 LVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHG-RIAVCGMVSL 261 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G-~~v~~g~~~~ 261 (347)
|..+....--+++|..|+. ....+...+++.= ..+.+|....
T Consensus 192 ----i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 192 ----IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred ----hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 4554444567899999974 5666666776643 4555665433
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-06 Score=81.08 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCH------------HHHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDE------------TDLVAALKR 222 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~------------~~~~~~i~~ 222 (347)
.++++++|+|+ |.+|+++++.++.+|++|++++.+.++++.++ ++|++. .++..+. +++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 46789999996 99999999999999999999999999999999 899864 2332110 123333333
Q ss_pred HCC---CCccEEEeCC---Ch--h--hHHHHHHhhhcCCeEEEEccccccc
Q 019012 223 CFP---QGIDIYFDNV---GG--E--MLDAALLNMRDHGRIAVCGMVSLHS 263 (347)
Q Consensus 223 ~~~---g~~d~vid~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~ 263 (347)
... .++|++|+|+ |. + ..++.++.|++++.++.+....+.+
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn 290 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGN 290 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCC
Confidence 332 2699999999 54 2 4678899999999999998755543
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-05 Score=69.70 Aligned_cols=168 Identities=14% Similarity=0.159 Sum_probs=99.6
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC--C
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF--P 225 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~--~ 225 (347)
+.+++|++||.+|+ |+ |..++++++..|. +|++++.+++..+.+++. ++...+ +.... + +.++. +
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d----~~~l~~~~ 144 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-E----IEALPVAD 144 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-c----hhhCCCCC
Confidence 56889999999995 66 8888888888765 799999999988888732 343322 11111 2 22222 3
Q ss_pred CCccEEEeCCC-------hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHH
Q 019012 226 QGIDIYFDNVG-------GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRF 298 (347)
Q Consensus 226 g~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (347)
+.||+|+.... ...++++.+.|+++|+++..+..... . .. ....+...+.+....... .
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~----~---~~--~~~~~~~~~~~~~~~~~~-----~ 210 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG----E---LP--EEIRNDAELYAGCVAGAL-----Q 210 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC----C---CC--HHHHHhHHHHhccccCCC-----C
Confidence 47999986532 24789999999999999998764332 1 11 111111111111111100 1
Q ss_pred HHHHHHHHHC-Ccee--eeeecccccccHHHHHHHh--hcCcccceEEE
Q 019012 299 LDYVISNYKQ-GKIV--YVEDMNEGLENAPAAFVGL--FSGKNVGKQVV 342 (347)
Q Consensus 299 ~~~~~~~l~~-g~i~--~~~~~~~~l~~~~~a~~~~--~~~~~~gk~vv 342 (347)
.+++.+++.+ |... ......++++++.++++.+ ..++..++.+.
T Consensus 211 ~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 211 EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 2344455554 4333 3334456889999999988 55444444443
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.3e-06 Score=70.09 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----CeeeecCCHHHHHHHHHHHCCC--CccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----DEAFNYNDETDLVAALKRCFPQ--GIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~g--~~d~ 230 (347)
.++.++|+||++++|.++++.+...|++|+.+.+..++++.+.++++. ...+|.++.++....+..+... .+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 457899999999999999999999999999999999999999888882 3456777654555556655444 6999
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
+++..|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999983
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.9e-06 Score=75.41 Aligned_cols=105 Identities=19% Similarity=0.202 Sum_probs=79.0
Q ss_pred hhHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHH
Q 019012 143 FTAYAGFHEVCSPK-SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALK 221 (347)
Q Consensus 143 ~ta~~al~~~~~~~-~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~ 221 (347)
..+|+++.+..++. .|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...+. ..|+. +. ++.+.++
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~ 266 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE 266 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh
Confidence 34566664443444 8999999995 99999999999999999999998888766666 56754 32 1222222
Q ss_pred HHCCCCccEEEeCCChh-hHH-HHHHhhhcCCeEEEEccccc
Q 019012 222 RCFPQGIDIYFDNVGGE-MLD-AALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 222 ~~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~~ 261 (347)
++|++|+++|.. .+. ..+..+++++.++.+|....
T Consensus 267 -----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 267 -----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred -----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 589999999974 454 67889999999999987543
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.5e-05 Score=71.58 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++.+|+|+|+ |.+|+.+++.++.+|++|++++++.++.+.+.+.++..........+++.+.+. .+|++|+|++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVL 239 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEccc
Confidence 3456999996 999999999999999999999999888887763566532223332213333332 4899999983
Q ss_pred ---h--h--hHHHHHHhhhcCCeEEEEccccccc
Q 019012 237 ---G--E--MLDAALLNMRDHGRIAVCGMVSLHS 263 (347)
Q Consensus 237 ---~--~--~~~~~~~~l~~~G~~v~~g~~~~~~ 263 (347)
. . .....++.+++++.++.++...+.+
T Consensus 240 ~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~ 273 (370)
T TIGR00518 240 IPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC 273 (370)
T ss_pred cCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence 2 2 2477888899999999998765544
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=74.75 Aligned_cols=101 Identities=15% Similarity=0.204 Sum_probs=78.8
Q ss_pred HHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 145 AYAGFHEVCSP-KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 145 a~~al~~~~~~-~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.+.++.+..++ -.|++++|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|+. ++ +..+.++
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~-- 308 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS-- 308 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh--
Confidence 46666555444 67999999995 99999999999999999999998887766666 66764 22 2222333
Q ss_pred CCCCccEEEeCCChhh--HHHHHHhhhcCCeEEEEccc
Q 019012 224 FPQGIDIYFDNVGGEM--LDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 224 ~~g~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~ 259 (347)
..|+++.++|... ....+..|++++.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 3899999999753 48899999999999999974
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.4e-05 Score=73.28 Aligned_cols=103 Identities=20% Similarity=0.245 Sum_probs=77.6
Q ss_pred hHHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH
Q 019012 144 TAYAGFHEVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 144 ta~~al~~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
.++.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...+. ..|+. +.+ ..+.++
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~~------leeal~- 249 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VMT------MEEAAK- 249 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eCC------HHHHHh-
Confidence 35555544433 368999999995 99999999999999999999998888766666 66762 321 112222
Q ss_pred HCCCCccEEEeCCChh-hHH-HHHHhhhcCCeEEEEcccc
Q 019012 223 CFPQGIDIYFDNVGGE-MLD-AALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 223 ~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~ 260 (347)
+.|++|+++|.. .+. ..+..+++++.++.+|...
T Consensus 250 ----~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 250 ----IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred ----cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 479999999975 454 4888999999999998753
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00012 Score=65.10 Aligned_cols=94 Identities=21% Similarity=0.291 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.+++++|+|. |.+|+.+++.++.+|++|++++++.++.+.++ ++|+.. +... ++.+.+. ++|+||+|+.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~~---~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHLS---ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecHH---HHHHHhC-----CCCEEEECCC
Confidence 6899999996 99999999999999999999999988888888 888642 2221 2322232 4999999987
Q ss_pred hh-hHHHHHHhhhcCCeEEEEccccc
Q 019012 237 GE-MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 237 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
.. ..+..++.+++++.++.++..++
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 64 34567788999999998887554
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.4e-05 Score=65.72 Aligned_cols=142 Identities=15% Similarity=0.207 Sum_probs=93.6
Q ss_pred CCCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHH
Q 019012 93 NPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQ 172 (347)
Q Consensus 93 v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~ 172 (347)
.+.+++||+++...+|.+|.. +... ++++ +.. +++..+..+.+.. ....+.. .+.++++||-.|+ |. |.
T Consensus 64 ~~p~~~g~~~~i~p~~~~~~~-~~~~-~i~i-~p~---~afgtg~h~tt~~-~l~~l~~--~~~~~~~VLDiGc-Gs-G~ 132 (250)
T PRK00517 64 FHPIRIGDRLWIVPSWEDPPD-PDEI-NIEL-DPG---MAFGTGTHPTTRL-CLEALEK--LVLPGKTVLDVGC-GS-GI 132 (250)
T ss_pred CCCEEEcCCEEEECCCcCCCC-CCeE-EEEE-CCC---CccCCCCCHHHHH-HHHHHHh--hcCCCCEEEEeCC-cH-HH
Confidence 455889999999999998855 5555 7888 666 5654333322211 2333322 2568899999995 65 88
Q ss_pred HHHHHHHHCCC-EEEEEECChHhHHHHHHHc---CCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh----hHHHH
Q 019012 173 LVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL---GFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE----MLDAA 243 (347)
Q Consensus 173 ~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~----~~~~~ 243 (347)
.++.+++ .|+ +|++++.++...+.+++.+ +....+.... +. .||+|+.+...+ .+..+
T Consensus 133 l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD~Vvani~~~~~~~l~~~~ 199 (250)
T PRK00517 133 LAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKADVIVANILANPLLELAPDL 199 (250)
T ss_pred HHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcCEEEEcCcHHHHHHHHHHH
Confidence 7776554 577 6999999998888776322 2211111111 11 499999776543 46778
Q ss_pred HHhhhcCCeEEEEcc
Q 019012 244 LLNMRDHGRIAVCGM 258 (347)
Q Consensus 244 ~~~l~~~G~~v~~g~ 258 (347)
.+.|+++|+++..|.
T Consensus 200 ~~~LkpgG~lilsgi 214 (250)
T PRK00517 200 ARLLKPGGRLILSGI 214 (250)
T ss_pred HHhcCCCcEEEEEEC
Confidence 889999999998765
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.9e-05 Score=69.65 Aligned_cols=107 Identities=18% Similarity=0.225 Sum_probs=77.1
Q ss_pred ceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCC---CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhH
Q 019012 120 LRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSP---KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKV 195 (347)
Q Consensus 120 ~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~---~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~ 195 (347)
.+++ |+. +..+.+....+...+++++...... .++.+|+|.|+ |.+|..+++.++..|+ +|+++.++.++.
T Consensus 141 a~~~-~k~---vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 141 AIKV-GKR---VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHH-HHH---HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 5666 777 7777676677788888887432221 47899999996 9999999999998876 899999988876
Q ss_pred HHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhH
Q 019012 196 DLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEML 240 (347)
Q Consensus 196 ~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~ 240 (347)
..+.+++|.. +++.. ++.+.+. .+|+||.|++.+..
T Consensus 216 ~~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 216 EELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence 4444388873 44331 3333333 38999999997544
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.5e-05 Score=75.36 Aligned_cols=140 Identities=21% Similarity=0.247 Sum_probs=88.7
Q ss_pred CcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEE
Q 019012 107 GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVV 186 (347)
Q Consensus 107 ~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~ 186 (347)
++++|..+++.. ++.+ +. ++.+.+.+... ......+|+++||+||+|++|+++++.+...|++|+
T Consensus 386 ~~~~~~~l~~~~-~f~i--~~---~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vv 450 (681)
T PRK08324 386 AVGRYEPLSEQE-AFDI--EY---WSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVV 450 (681)
T ss_pred hcCCccCCChhh-hcce--ee---ehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEE
Confidence 667777777666 6554 22 33333221100 012234689999999999999999999999999999
Q ss_pred EEECChHhHHHHHHHcCC-----CeeeecCCHHHHHHHHHHHC--CCCccEEEeCCChh---------------------
Q 019012 187 GSAGSSQKVDLLKNKLGF-----DEAFNYNDETDLVAALKRCF--PQGIDIYFDNVGGE--------------------- 238 (347)
Q Consensus 187 ~~~~~~~~~~~~~~~~g~-----~~vi~~~~~~~~~~~i~~~~--~g~~d~vid~~g~~--------------------- 238 (347)
+++++.++.+.+.+.++. ...+|..+.+.+...+.+.. .+++|++|++.|..
T Consensus 451 l~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~ 530 (681)
T PRK08324 451 LADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA 530 (681)
T ss_pred EEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence 999998877666534443 12345555423333333322 24799999999820
Q ss_pred -----hHHHHHHhhhc---CCeEEEEccccc
Q 019012 239 -----MLDAALLNMRD---HGRIAVCGMVSL 261 (347)
Q Consensus 239 -----~~~~~~~~l~~---~G~~v~~g~~~~ 261 (347)
.++.+++.+++ +|+++.++....
T Consensus 531 ~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 531 TGHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 13344566665 589999886543
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.06 E-value=3.1e-05 Score=62.92 Aligned_cols=79 Identities=18% Similarity=0.336 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--CeeeecCCHH---HHHHHHHHHCCCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--DEAFNYNDET---DLVAALKRCFPQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~---~~~~~i~~~~~g~~d~v 231 (347)
.|-+|||+||++++|++.++-...+|-+|+++.+++++++.+++..-. +.+.|..+.+ .+.+++++..+ ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 477999999999999999999999999999999999999999833321 3566655541 24445554333 57899
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 99888
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00022 Score=62.93 Aligned_cols=79 Identities=15% Similarity=0.315 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHH---HHCCCCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALK---RCFPQGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~---~~~~g~~d~vi 232 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+. ..++.. .+|..+.+++...+. +..++.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999999998889999999999988887777 556532 246665423333333 33445799999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00013 Score=62.74 Aligned_cols=104 Identities=19% Similarity=0.217 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC---CCee--eecCCHHHHHHHHHHHC--CCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FDEA--FNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g---~~~v--i~~~~~~~~~~~i~~~~--~g~~d 229 (347)
.++++||+||+|++|..+++.+...|++|+.+++++++.+.+.+++. ..+. .|..+.+.+.+.+++.. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999999999999887766632332 1122 34444323333333321 13689
Q ss_pred EEEeCCChh------------------------hHHHHHHhhhcCCeEEEEcccc
Q 019012 230 IYFDNVGGE------------------------MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 230 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
.++.+.+.. .++..+++++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999888731 1344556667789999888653
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00025 Score=60.89 Aligned_cols=102 Identities=22% Similarity=0.300 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.++++||+||+|++|...++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+.+.+.+.+.+. +.+|++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4789999999999999999999999999887765 44555555435565322 4554432344444332 368999999
Q ss_pred CChh----h-------H---------------HHHHHhhhcCCeEEEEcccc
Q 019012 235 VGGE----M-------L---------------DAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 235 ~g~~----~-------~---------------~~~~~~l~~~G~~v~~g~~~ 260 (347)
.|.. . + ..+++.++..|+++.++...
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 8731 0 0 23334455678999887643
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00025 Score=62.44 Aligned_cols=77 Identities=23% Similarity=0.399 Sum_probs=57.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHC--CCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCF--PQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~--~g~~d~vid~~ 235 (347)
+++||+||+|++|...++.+...|++|++++++.++.+.+. ..+... .+|..+.+++.+.+.+.. .+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999889999999999988777766 555532 256666434444444332 23699999999
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 8
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.90 E-value=9.2e-05 Score=63.84 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC----CC---eeeecCCHHHHHHHHHHHCC-C-
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG----FD---EAFNYNDETDLVAALKRCFP-Q- 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g----~~---~vi~~~~~~~~~~~i~~~~~-g- 226 (347)
..+.++||+||++++|...+..+-..|.+|+.+.|+++|++.+.+++. .. ..+|..++++......++.. +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 467899999999999999999999999999999999999888765543 21 23566665233322222222 2
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+.++++|
T Consensus 84 ~IdvLVNNAG 93 (265)
T COG0300 84 PIDVLVNNAG 93 (265)
T ss_pred cccEEEECCC
Confidence 6999999998
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.9e-05 Score=57.57 Aligned_cols=95 Identities=20% Similarity=0.221 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
-.+.++||+|+ |++|.+++..+...|+ +|+++.|+.+|.+.+.+.++.. .++++.+ +.+.+. .+|++|
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~-----~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQ-----EADIVI 80 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHH-----TESEEE
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHh-----hCCeEE
Confidence 35889999996 9999999999999999 6999999999888877577432 3445542 333333 499999
Q ss_pred eCCChhhH---HHHHHhhhc-CCeEEEEccc
Q 019012 233 DNVGGEML---DAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 233 d~~g~~~~---~~~~~~l~~-~G~~v~~g~~ 259 (347)
+|++.... ...+....+ -+.++.++.+
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 99986422 223332222 2566666643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00032 Score=61.75 Aligned_cols=79 Identities=25% Similarity=0.403 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
++.+++|+|++|++|...++.+...|++|++++++.++.+.+. ..++. ...|..+.+++...+++.. .+++|++|.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999999999999999999889999999999988776665 44543 2356665534444444332 237999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00035 Score=57.26 Aligned_cols=105 Identities=14% Similarity=0.283 Sum_probs=77.6
Q ss_pred CCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-CeeeecCCHH---HHHHHHHHHCCCCccEE
Q 019012 157 SGEYVFVSAA-SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEAFNYNDET---DLVAALKRCFPQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga-~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~---~~~~~i~~~~~g~~d~v 231 (347)
....|||+|+ .|++|.+.+.-....|+.|++++++-++.+.+..++|. ..=+|.++++ .+..++++.++|..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3467899987 67899998888888899999999999988888767886 2345655542 35667777788899999
Q ss_pred EeCCChh-----------hHHH----------------HHHhhhcCCeEEEEccccc
Q 019012 232 FDNVGGE-----------MLDA----------------ALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 232 id~~g~~-----------~~~~----------------~~~~l~~~G~~v~~g~~~~ 261 (347)
++..|.. .+++ ..-.++..|++|.+|...+
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 9987742 1111 1224567899999997654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00067 Score=59.28 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
.++++||+||+|++|.+.+..+...|++|++++++.++.+.+.++++.. ...|..+.+++.+.+.+.. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4679999999999999999999889999999999887766665355531 1245555423443333322 1368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 85 v~~ag 89 (261)
T PRK08265 85 VNLAC 89 (261)
T ss_pred EECCC
Confidence 99877
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00041 Score=64.68 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=75.0
Q ss_pred HHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCC
Q 019012 147 AGFHEVC-SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 147 ~al~~~~-~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
.++.+.. ..-.|++++|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|+. +. ++.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~---- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE---- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh----
Confidence 4444432 3457999999995 99999999999999999999988877655555 55653 22 2222332
Q ss_pred CCccEEEeCCChh-hH-HHHHHhhhcCCeEEEEcccc
Q 019012 226 QGIDIYFDNVGGE-ML-DAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 226 g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~ 260 (347)
.+|+++.++|.. .+ ...+..|++++.++.+|...
T Consensus 309 -~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 309 -TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred -cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 489999999864 44 48999999999999998753
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0026 Score=56.30 Aligned_cols=94 Identities=21% Similarity=0.252 Sum_probs=70.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|++++|+|. |.+|.+++..++.+|++|++..++.++.+.+. +.|.. .++.. ++.+.++ .+|++|+++.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~~---~l~~~l~-----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPLN---KLEEKVA-----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecHH---HHHHHhc-----cCCEEEECCC
Confidence 5789999996 99999999999999999999999988877776 66653 22211 3333332 4999999987
Q ss_pred hhh-HHHHHHhhhcCCeEEEEccccc
Q 019012 237 GEM-LDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 237 ~~~-~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
... -...+..++++..++.++..++
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence 543 2456777888888888876443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=6.2e-05 Score=73.34 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=65.6
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC---------------------hHhHHHHHHHcCCCeeeecCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS---------------------SQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~---------------------~~~~~~~~~~~g~~~vi~~~~ 212 (347)
...+|++|+|.|+ |+.|+++++.++..|++|++++.. +.+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 4678999999997 999999999999999999998842 34567777 899876555432
Q ss_pred -HHHH-HHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEc
Q 019012 213 -ETDL-VAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 213 -~~~~-~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g 257 (347)
. +. .+.+. .++|+||+++|.. .....+......|.+..++
T Consensus 211 ~~-~~~~~~~~----~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 211 GE-DITLEQLE----GEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred CC-cCCHHHHH----hhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 1 21 11121 2599999999964 2333333344455554443
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00016 Score=67.67 Aligned_cols=148 Identities=18% Similarity=0.148 Sum_probs=91.2
Q ss_pred CCCCCceecceEEEEeccCCCCCCCCCEEE-Ee-----------cCcceeEEeeccccceecCCCCCCChhhhhhhcCCh
Q 019012 74 FVPGQPVEGFGVSKVVDSDNPNFKPGDLVA-GL-----------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMP 141 (347)
Q Consensus 74 ~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~-~~-----------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~ 141 (347)
..-|||+++ .+.+|+++.+..-+|+.=+ +. |+....+.--=.. .+++ |+. +..+.+....+
T Consensus 90 ~~~g~ea~~--hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~-a~~~-~k~---v~~~t~i~~~~ 162 (423)
T PRK00045 90 VHEGEEAVR--HLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK-AFSV-AKR---VRTETGIGAGA 162 (423)
T ss_pred hcCCHHHHH--HHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH-HHHH-Hhh---HhhhcCCCCCC
Confidence 346899877 8888888876644554322 10 1111100000001 2344 544 44444444556
Q ss_pred hhhHHHHHHhhcC---CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH
Q 019012 142 GFTAYAGFHEVCS---PKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV 217 (347)
Q Consensus 142 ~~ta~~al~~~~~---~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 217 (347)
.+.+++++..... -.++.+|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+.+.+++|.. +++.. ++.
T Consensus 163 ~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~~ 237 (423)
T PRK00045 163 VSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---ELP 237 (423)
T ss_pred cCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---HHH
Confidence 6777777733221 257899999996 9999999999999998 8999999988766444377753 44331 333
Q ss_pred HHHHHHCCCCccEEEeCCChh
Q 019012 218 AALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~~ 238 (347)
+.+. ++|+||+|++.+
T Consensus 238 ~~l~-----~aDvVI~aT~s~ 253 (423)
T PRK00045 238 EALA-----EADIVISSTGAP 253 (423)
T ss_pred HHhc-----cCCEEEECCCCC
Confidence 3332 489999999864
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0011 Score=58.02 Aligned_cols=81 Identities=23% Similarity=0.331 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHC-CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCF-PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~-~g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|-.+.++....+.+.. .+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999999999999999999999999999999887766554332 321 2245555423333333322 2469
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++.+.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999998873
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00044 Score=61.71 Aligned_cols=81 Identities=21% Similarity=0.261 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--C-ee--eecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--D-EA--FNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~v--i~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+++++||+||+|++|.++++.+...|++|++++++.++.+.+.++++. . .. .|..+.++....+.+... +.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999999998887766545652 1 11 465554233333333221 3699
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999883
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0036 Score=51.36 Aligned_cols=92 Identities=21% Similarity=0.253 Sum_probs=65.4
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCCh--
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGG-- 237 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-- 237 (347)
|+|+||+|.+|...++.+...|.+|+++++++++.+. ..+++. ..|..+.+.+.+.+ . ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al----~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAAL----K-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHH----T-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhh----h-hcchhhhhhhhhc
Confidence 7999999999999999999999999999999987665 223322 23444431222222 2 59999999983
Q ss_pred ---hhHHHHHHhhhcCC--eEEEEcccc
Q 019012 238 ---EMLDAALLNMRDHG--RIAVCGMVS 260 (347)
Q Consensus 238 ---~~~~~~~~~l~~~G--~~v~~g~~~ 260 (347)
+.....++.++..| +++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 35666777776654 777776543
|
... |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.001 Score=52.74 Aligned_cols=102 Identities=21% Similarity=0.248 Sum_probs=67.6
Q ss_pred HHHHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 145 AYAGFHEVC-SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 145 a~~al~~~~-~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.+.++.+.. -.-.|++++|.| -|.+|...++.++.+|++|++++.++-+.-++. .-|.. +. +..+.++
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-- 77 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-- 77 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT--
T ss_pred HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh--
Confidence 344443332 346799999999 699999999999999999999999998776666 55653 32 2222222
Q ss_pred CCCCccEEEeCCChhh--HHHHHHhhhcCCeEEEEcccc
Q 019012 224 FPQGIDIYFDNVGGEM--LDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 224 ~~g~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 260 (347)
..|++|.++|... -.+.++.|+++-.+..+|..+
T Consensus 78 ---~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 78 ---DADIFVTATGNKDVITGEHFRQMKDGAILANAGHFD 113 (162)
T ss_dssp ---T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST
T ss_pred ---hCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCc
Confidence 4899999999753 467888999998888888643
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0011 Score=60.15 Aligned_cols=81 Identities=22% Similarity=0.213 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+ +.|.. ...|..+.+++...+.+.. .+.+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 46799999999999999999998899999999998877655432 23432 1245555423333333221 1369
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|++.|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999873
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0015 Score=56.96 Aligned_cols=83 Identities=17% Similarity=0.226 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC----eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD----EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.-++.++||+||+|++|..++..+...|++|+++.++.++.+.+.+...-. ...|..+++++.+.+.+.. .+++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357789999999999999999999999999999999877666555233211 2345555423333232221 1369
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+||.+.|.
T Consensus 88 d~vi~~ag~ 96 (264)
T PRK12829 88 DVLVNNAGI 96 (264)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00082 Score=58.46 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
+++++||+||+|++|.+.++.+...|++|+++++++.+.+...++++.. ...|..+.+.+...+.+.. .+.+|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999999887766554355542 2346655423333333322 136899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 86 ~ag 88 (255)
T PRK06057 86 NAG 88 (255)
T ss_pred CCC
Confidence 886
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00079 Score=58.83 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
+++++||+||++++|...++.+...|++|+++++++++.+.+.++++.. ...|..+.+++...+.+.. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999899999999999988877766444421 2235444423433343332 2368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99887
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0013 Score=56.66 Aligned_cols=79 Identities=25% Similarity=0.361 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
++.+++|+|++|++|...++.+...|++|++++++.++.+.+.+..+... ..|..+.+++...+.+ .+++|++|.+.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 46899999999999999999999999999999998877766653555432 3455554223333332 23689999988
Q ss_pred Ch
Q 019012 236 GG 237 (347)
Q Consensus 236 g~ 237 (347)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 73
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0015 Score=56.87 Aligned_cols=106 Identities=23% Similarity=0.348 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe-e----eecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE-A----FNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~-v----i~~~~~~~~~~~i~~~~--~g 226 (347)
.|+.|+|+||++++|.+++.-.-..|++++.+.+..++++.+.+ +.+..+ + +|-.+.++....+.+.. -|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57899999999999998877777789999888888887776621 233322 2 34444434444443222 24
Q ss_pred CccEEEeCCChh-----------hH---------------HHHHHhhhc-C-CeEEEEcccccc
Q 019012 227 GIDIYFDNVGGE-----------ML---------------DAALLNMRD-H-GRIAVCGMVSLH 262 (347)
Q Consensus 227 ~~d~vid~~g~~-----------~~---------------~~~~~~l~~-~-G~~v~~g~~~~~ 262 (347)
++|+.+++.|-. .+ ..++..|++ + |++|.++...+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 799999988721 11 345666665 3 999999876653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0022 Score=60.80 Aligned_cols=80 Identities=19% Similarity=0.294 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
+++++||+||+|++|...++.+...|++|++++++. ++.+.+.++++.. ..+|..+.+.....+.... .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999999999999999988743 3333333255543 3356665523333333222 2369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99988
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.002 Score=55.15 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC---Ce--eeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DE--AFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---~~--vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
++.++||+||+|.+|...++.+...|++|+++++++++...+.+.+.. .+ ..|..+..++.+.+++... +++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999988888899999999988776655434431 11 2344443244444443321 3689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 85 ~vi~~ag 91 (237)
T PRK07326 85 VLIANAG 91 (237)
T ss_pred EEEECCC
Confidence 9999876
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00054 Score=56.60 Aligned_cols=111 Identities=20% Similarity=0.205 Sum_probs=76.3
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHH----HHHHcCCCeeeecCC
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL----LKNKLGFDEAFNYND 212 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~----~~~~~g~~~vi~~~~ 212 (347)
++..+...|. . .+...++++++||=+| ++.|+.++-+++..| +|+.+.+.++=.+. ++ .+|...|.....
T Consensus 54 tis~P~~vA~-m-~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~-~lg~~nV~v~~g 127 (209)
T COG2518 54 TISAPHMVAR-M-LQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLE-TLGYENVTVRHG 127 (209)
T ss_pred eecCcHHHHH-H-HHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHH-HcCCCceEEEEC
Confidence 3444444444 2 2667899999999999 678999999999988 99999988863333 44 677754332222
Q ss_pred HHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcc
Q 019012 213 ETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 213 ~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
|- ..-+... .||.++-+.+.+ .-+..++.|+++|+++..-.
T Consensus 128 --DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 128 --DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred --Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 11 1112222 699998777765 44778999999999998544
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00039 Score=52.10 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=63.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEECChHhHHHHHHHc---CCCeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAK-LHGCYVVGSAGSSQKVDLLKNKL---GFDEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~-~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
|+.+||-+| .+.|..++.+++ ..+++|++++.+++-.+.+++.. +...-+..... ++ .......+.||+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~--~~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA--EFDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC--HGGTTTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc--ccCcccCCCCCEEE
Confidence 688999999 456888888888 46889999999999888887554 32111111111 22 01111122799999
Q ss_pred eCC-Ch----h------hHHHHHHhhhcCCeEEEE
Q 019012 233 DNV-GG----E------MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 233 d~~-g~----~------~~~~~~~~l~~~G~~v~~ 256 (347)
... .. . .++...+.|+++|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 877 22 1 367888899999998863
|
... |
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0031 Score=54.92 Aligned_cols=79 Identities=23% Similarity=0.276 Sum_probs=56.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-C--C-eeeecCCHHHHHHHHHHH---CCCCccEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-F--D-EAFNYNDETDLVAALKRC---FPQGIDIY 231 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-~--~-~vi~~~~~~~~~~~i~~~---~~g~~d~v 231 (347)
+++||+||+|++|...++.+...|++|++++++.++.+.+.+..+ . . ..+|..+..++.+.+.+. ..+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 479999999999999999888899999999998887776653333 1 1 234655542344333332 23479999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
+.+.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 998873
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0025 Score=55.03 Aligned_cols=102 Identities=20% Similarity=0.231 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+++++||+||+|++|...+..+...|++|+++.++.+ +.+.+.+ ..+.. ...|..+.+++...+.+... +.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3679999999999999999988889999999887643 3332221 22321 12355554334333333222 36
Q ss_pred ccEEEeCCChh--------------------hHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFDNVGGE--------------------MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 258 (347)
+|+++.+.+.. .++.+.+.+..+|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999887631 22334444555688888865
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.001 Score=58.50 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=56.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-CC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-FD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
+.++||+||+|++|...++.+...|++|+++++++++.+.+.+.++ +. ..+|..+++++...+.+... +++|+++.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999998888889999999998887766543554 22 23465554343333333221 46899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 85 ~ag 87 (273)
T PRK07825 85 NAG 87 (273)
T ss_pred CCC
Confidence 987
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0023 Score=61.32 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=69.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--------CC------C-eeeecCCHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--------GF------D-EAFNYNDETD 215 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--------g~------~-~vi~~~~~~~ 215 (347)
...+.+.|+++||+||+|.+|..+++.+...|++|++++++.++.+.+.+.+ |. . ...|..+. +
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~-e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP-D 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH-H
Confidence 3456678999999999999999999999889999999999988765543111 21 1 12344443 1
Q ss_pred HHHHHHHHCCCCccEEEeCCChh----------------hHHHHHHhhhc--CCeEEEEcccc
Q 019012 216 LVAALKRCFPQGIDIYFDNVGGE----------------MLDAALLNMRD--HGRIAVCGMVS 260 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~~----------------~~~~~~~~l~~--~G~~v~~g~~~ 260 (347)
.+.+.. +++|+||.+.|.. ....+++++.. .+++|.++...
T Consensus 152 ---sI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 152 ---QIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred ---HHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 233322 3599999998742 11233444443 36899888654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0019 Score=62.41 Aligned_cols=106 Identities=19% Similarity=0.202 Sum_probs=73.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
..++++||+||++++|++.++.+...|++|++++++.++.+.+.++++.. ..+|..+++++...+.+... +.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999999999999999988889999999999988877776455542 23455554344444433321 46999
Q ss_pred EEeCCChh------------h---------------HHHHHHhhhcCCeEEEEccccc
Q 019012 231 YFDNVGGE------------M---------------LDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 231 vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+|.+.|.. . .+.++..++++|+++.++....
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 99988731 0 1223445556799999876543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0011 Score=58.01 Aligned_cols=80 Identities=23% Similarity=0.264 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
+++++||+||+|++|...++.+...|++|++++++.++.+.+.+..+.. ...|..+.++..+.+++... +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999999889999999999888777666333321 12355543233333433322 368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99876
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0017 Score=56.40 Aligned_cols=77 Identities=18% Similarity=0.305 Sum_probs=57.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHH---HHHHHHHCCCCccEEEeC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDL---VAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~---~~~i~~~~~g~~d~vid~ 234 (347)
+++||+||+|++|.+.++.+...|++|++++++.++.+.++ +.++.. ..|..+.+.+ .+.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999999999999999999988888777 677643 3455543222 233333344568888888
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0023 Score=55.22 Aligned_cols=81 Identities=20% Similarity=0.219 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++.++||+||+|++|...+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+.. .+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999889999999998877655443222 321 1235555423333333221 1369
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0021 Score=53.84 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=76.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHH---HcCCCeee-ecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKN---KLGFDEAF-NYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~vi-~~~~~~~~~~~i~~~~ 224 (347)
..++....++||=+| +.+|+.++++|..+. .+++.++.++++.+.+++ +.|.+..+ -.... +..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 345667888999998 789999999999886 489999999998888763 34664322 11212 5555666544
Q ss_pred CCCccEEE-eCCCh---hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYF-DNVGG---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|| |+.-. ..++.+++.|++||.++.=..
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 46899996 55543 478999999999999886543
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0013 Score=59.60 Aligned_cols=79 Identities=23% Similarity=0.340 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe---eeecCCHHHHHH---HHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE---AFNYNDETDLVA---ALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~---~i~~~~~g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+ +.|... ..|..+.++..+ .+.+.. +.
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG-GR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence 46899999999999999999999999999999999887765442 345431 246555423332 333322 46
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 999999987
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0059 Score=50.96 Aligned_cols=100 Identities=18% Similarity=0.289 Sum_probs=69.3
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHH---HcCC-CeeeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKN---KLGF-DEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~---~~g~-~~vi~~~~~~~~~~~i~~~~ 224 (347)
....+.++++||-.|+ |+ |..++++++..+ .+|++++.+++..+.+++ .+|. +.+..... +..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhhc-
Confidence 4467889999999995 65 999999998764 489999999988776652 3563 32221221 222223322
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEE
Q 019012 225 PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAV 255 (347)
Q Consensus 225 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 255 (347)
.+.+|.||...+. ..++.+.+.|+++|+++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 2479999986552 367888889999999985
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0011 Score=58.15 Aligned_cols=80 Identities=21% Similarity=0.243 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+++++||+||+|++|...++.+...|++|++++++.++.+...+++ +.. ..+|..+.+++...+++... +++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999889999999998877654432122 221 12455554344444444322 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998875
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0016 Score=55.49 Aligned_cols=77 Identities=25% Similarity=0.238 Sum_probs=55.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.+++|+||+|++|...+..+...|++|+++++++++.+.++ +++-. ..+|..+.+++.+.+.++..+++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999988888888999999999887766665 44321 2345555424444444444347999998876
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0018 Score=58.47 Aligned_cols=80 Identities=15% Similarity=0.303 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----C-CC---eeeecCCH-HHHHHHHHHHCCC-
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----G-FD---EAFNYNDE-TDLVAALKRCFPQ- 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g-~~---~vi~~~~~-~~~~~~i~~~~~g- 226 (347)
.|+++||+||++++|.+.+..+...|++|+++++++++.+.+.+++ + .. ..+|..+. .+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5889999999999999988888788999999999998876654332 1 11 12454421 1344455554444
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++++.|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 6779999876
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0013 Score=58.26 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=85.4
Q ss_pred CCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 019012 94 PNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQL 173 (347)
Q Consensus 94 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ 173 (347)
..+++|++.+....|.++-..+... .+.+ ... +.+-.+.-+... .+...+.. ...++++||-.|+ |+ |..
T Consensus 104 ~p~~~g~~~~i~p~w~~~~~~~~~~-~i~l-dpg---~aFgtG~h~tt~-l~l~~l~~--~~~~g~~VLDvGc-Gs-G~l 173 (288)
T TIGR00406 104 HPVQFGKRFWICPSWRDVPSDEDAL-IIML-DPG---LAFGTGTHPTTS-LCLEWLED--LDLKDKNVIDVGC-GS-GIL 173 (288)
T ss_pred CCEEEcCeEEEECCCcCCCCCCCcE-EEEE-CCC---CcccCCCCHHHH-HHHHHHHh--hcCCCCEEEEeCC-Ch-hHH
Confidence 3478888888777776654322222 4555 222 232111111111 11222211 2457899999994 55 887
Q ss_pred HHHHHHHCCC-EEEEEECChHhHHHHHHHc---CCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCChh----hHHHHH
Q 019012 174 VGQLAKLHGC-YVVGSAGSSQKVDLLKNKL---GFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGGE----MLDAAL 244 (347)
Q Consensus 174 ai~la~~~G~-~V~~~~~~~~~~~~~~~~~---g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~----~~~~~~ 244 (347)
++.+++ .|+ +|++++.++...+.+++.. +... +..... + ......+.||+|+...... .+....
T Consensus 174 ai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~--~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~ 246 (288)
T TIGR00406 174 SIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI--Y----LEQPIEGKADVIVANILAEVIKELYPQFS 246 (288)
T ss_pred HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec--c----cccccCCCceEEEEecCHHHHHHHHHHHH
Confidence 877765 566 9999999998777776322 2221 111111 1 1112234799999766532 566778
Q ss_pred HhhhcCCeEEEEcc
Q 019012 245 LNMRDHGRIAVCGM 258 (347)
Q Consensus 245 ~~l~~~G~~v~~g~ 258 (347)
+.|+++|.++..|.
T Consensus 247 ~~LkpgG~li~sgi 260 (288)
T TIGR00406 247 RLVKPGGWLILSGI 260 (288)
T ss_pred HHcCCCcEEEEEeC
Confidence 89999999998775
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0014 Score=57.13 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.++++||+||++++|.++++.+...|++|+++++++++.+.+.+++ +.. ...|..+++++...+.+.. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999899999999999887665544233 211 1235554423333333322 13
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 86 ~id~li~~ag 95 (260)
T PRK07063 86 PLDVLVNNAG 95 (260)
T ss_pred CCcEEEECCC
Confidence 6999999887
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0017 Score=56.83 Aligned_cols=80 Identities=21% Similarity=0.283 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.++..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999887665543222 111 1235555423333333322 24
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++.+.|
T Consensus 87 ~id~li~~Ag 96 (265)
T PRK07062 87 GVDMLVNNAG 96 (265)
T ss_pred CCCEEEECCC
Confidence 6999999987
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.002 Score=58.06 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-CC-eeeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-FD-EAFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
.+.++||+||+|++|.+++..+...|++|++++++.++.+.+.+++. +. ...|..+.+++...+.+... +++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999999888899999999998877655442332 21 22455554244444443322 4799999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
.+.|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9887
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0017 Score=56.77 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-e--eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-E--AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++.++||+||+|++|...++.+...|++|++++++.++.+.+.+.+ +.. . .+|..+.+.+.+.+.+.. .+.+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999889999999999887665544222 221 1 245555423333333321 1369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0051 Score=53.20 Aligned_cols=77 Identities=19% Similarity=0.365 Sum_probs=54.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEEEeC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIYFDN 234 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~vid~ 234 (347)
++||+||+|++|.+.+..+...|++|+++++++++.+.+.+.++.. ...|-.+.+++.+.+.+... +++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999999999999999889999999999988777665344432 12355444244443433322 368999988
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 82 ag 83 (248)
T PRK10538 82 AG 83 (248)
T ss_pred CC
Confidence 76
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0021 Score=56.16 Aligned_cols=82 Identities=23% Similarity=0.348 Sum_probs=56.3
Q ss_pred CCCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCCee----eecCCHHHHHHHHHHHC-
Q 019012 155 PKSGEYVFVSAASG-AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFDEA----FNYNDETDLVAALKRCF- 224 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g-~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~~v----i~~~~~~~~~~~i~~~~- 224 (347)
+.+++++||+||+| ++|.++++.+...|++|+++++++++.+...++ ++...+ .|..+.+++...+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44578999999986 899999999999999999999887766554322 343222 35555423333333321
Q ss_pred -CCCccEEEeCCC
Q 019012 225 -PQGIDIYFDNVG 236 (347)
Q Consensus 225 -~g~~d~vid~~g 236 (347)
.+.+|++|.+.|
T Consensus 94 ~~g~id~li~~ag 106 (262)
T PRK07831 94 RLGRLDVLVNNAG 106 (262)
T ss_pred HcCCCCEEEECCC
Confidence 146899999998
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0016 Score=56.60 Aligned_cols=80 Identities=21% Similarity=0.285 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+++++.+.+.+.. .+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999999887766554333 221 1245555423433333322 1469
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 88 d~lv~~ag 95 (253)
T PRK05867 88 DIAVCNAG 95 (253)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.002 Score=55.62 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
++.++||+||+|++|...++.+...|++|+++++++++.+.+.++++... ..|..+.++....+.+.. .+.+|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999998776665554566431 134443312222222221 1368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 85 i~~ag 89 (249)
T PRK06500 85 FINAG 89 (249)
T ss_pred EECCC
Confidence 99887
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0016 Score=56.76 Aligned_cols=81 Identities=22% Similarity=0.366 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCchHHHH-HHHHHHHCCCEEEEEECChHhHHHHHHH----cCC---CeeeecCCHHHHHHHHHHHCCC-
Q 019012 156 KSGEYVFVSAASGAVGQL-VGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGF---DEAFNYNDETDLVAALKRCFPQ- 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~-ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~---~~vi~~~~~~~~~~~i~~~~~g- 226 (347)
+-|++.+|+||+.++|.+ |-++|+ .|.+|+.+.|+++|++..+++ .++ ..++|+.+++...+.+++.+.+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 456899999999999966 667777 899999999999998876543 343 2467888762235666666666
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
.+-++++++|-
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 88999999984
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0058 Score=53.18 Aligned_cols=79 Identities=25% Similarity=0.296 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|+++++++...+... ++ +.. ...|..+.++....+.+... +.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998889999999998754322222 32 332 22455554233333433321 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999886
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0017 Score=57.82 Aligned_cols=81 Identities=22% Similarity=0.362 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-e--eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-E--AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.+++.+.+.+.. .+.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999988888999999999987765554222 321 1 234444423333333221 2368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++.+.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999873
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0023 Score=57.53 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.+++++|+||++++|.+++..+...|++|++++++.++.+.+.+++ +.. ..+|..+.++....+.++. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999888889999999999887665443222 111 1245555423333333322 13
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 93 ~iD~li~nAG 102 (313)
T PRK05854 93 PIHLLINNAG 102 (313)
T ss_pred CccEEEECCc
Confidence 6899999887
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0024 Score=58.92 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=73.3
Q ss_pred hhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH
Q 019012 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 143 ~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
...+..+.+..+++++++||-+|+ +.|..+..+++..|++|++++.+++..+.+++.. ....++.... ++. .
T Consensus 153 ~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~----~ 224 (383)
T PRK11705 153 EAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR----D 224 (383)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh----h
Confidence 344455556677899999999994 5788888999988999999999999999988333 2111221111 221 1
Q ss_pred HCCCCccEEEeC-----CCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 223 CFPQGIDIYFDN-----VGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 223 ~~~g~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
+ .+.||.|+.. ++. ..++.+.+.|+++|+++...
T Consensus 225 l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 225 L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 3469988753 332 35788888999999998754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0018 Score=56.26 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
-++.++||+||+|++|...+..+...|++|+++++++++.+.+.+++ +.. ..+|..+.+++...+.+... +.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999899999999999887665554232 221 23455544244433333211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 83 ~d~vi~~ag 91 (258)
T PRK07890 83 VDALVNNAF 91 (258)
T ss_pred ccEEEECCc
Confidence 899999886
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0023 Score=52.44 Aligned_cols=116 Identities=20% Similarity=0.159 Sum_probs=80.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
--.|.+|.|+|. |.+|+.+++.++.+|++|++.+++........ ..+.. +. ++.+.+++ .|+|+.+
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLH 98 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhh
Confidence 356899999994 99999999999999999999999888655344 45542 11 34444554 8999988
Q ss_pred CCh-h-----hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHC
Q 019012 235 VGG-E-----MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 235 ~g~-~-----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (347)
... + .-...+..|+++..+|.++-... . +-+.+++++++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~~---------v--------------------------de~aL~~aL~~ 143 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPGAVLVNVARGEL---------V--------------------------DEDALLDALES 143 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGGG---------B---------------------------HHHHHHHHHT
T ss_pred hccccccceeeeeeeeeccccceEEEeccchhh---------h--------------------------hhhHHHHHHhh
Confidence 763 1 23677889999998888764211 0 14678889999
Q ss_pred Cceeeeeeccc
Q 019012 309 GKIVYVEDMNE 319 (347)
Q Consensus 309 g~i~~~~~~~~ 319 (347)
|.+..-...++
T Consensus 144 g~i~ga~lDV~ 154 (178)
T PF02826_consen 144 GKIAGAALDVF 154 (178)
T ss_dssp TSEEEEEESS-
T ss_pred ccCceEEEECC
Confidence 99996655555
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0048 Score=54.38 Aligned_cols=78 Identities=19% Similarity=0.336 Sum_probs=54.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCC----C-eeeecCCHHHHHHHHHHHCC--CC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGF----D-EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~----~-~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+.++||+||+|++|...+..+...|++|++++++.++.+.+.+. .+. . ...|..+.+++.. +.+... +.
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 56899999999999999998888899999999887765544312 221 1 1245555434444 444321 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++.+.|
T Consensus 82 id~vv~~ag 90 (280)
T PRK06914 82 IDLLVNNAG 90 (280)
T ss_pred eeEEEECCc
Confidence 899999887
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0065 Score=53.36 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=52.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC----eeeecCCHHHHHHHHHHHC--CCCccE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD----EAFNYNDETDLVAALKRCF--PQGIDI 230 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~----~vi~~~~~~~~~~~i~~~~--~g~~d~ 230 (347)
++||+||+|++|..+++.+...|++|+++.+++++.+.+.++ .+.. ...|..+.+++...+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999888999999999887765444212 2332 1356665423333233321 136899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
+|.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999873
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0024 Score=55.37 Aligned_cols=80 Identities=20% Similarity=0.244 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC----eeeecCCHHHHHHHHHHHC--CCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD----EAFNYNDETDLVAALKRCF--PQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~--~g~~d~ 230 (347)
++.++||+||+|++|...++.+...|++|+.++++.+..+... ++... ...|..+.+++...+.+.. .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999999999999999888889999999998876544444 33221 1245444323333333221 136899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
++.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0021 Score=55.79 Aligned_cols=80 Identities=28% Similarity=0.382 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|...+..+...|++|+.+++++++.+.+.+++ +.. ...|..+.++....+++... +.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999988889999999999887766554232 321 12355444233333333221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 85 d~li~~ag 92 (254)
T PRK07478 85 DIAFNNAG 92 (254)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0023 Score=55.35 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC--C---CeeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--F---DEAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g--~---~~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
.+.++||+||+|++|...++.+...|++|++++++.++.+.+.+.+. . ....|..+.+++...+.+.. .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999888889999999999877665542333 1 12234444423433333321 13689
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998873
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0075 Score=53.08 Aligned_cols=80 Identities=25% Similarity=0.283 Sum_probs=55.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHC--CCCccEEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-E--AFNYNDETDLVAALKRCF--PQGIDIYF 232 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~g~~d~vi 232 (347)
+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.++.. . -.|..+.+++...+.+.. .+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999888888999999999888776665333321 1 235444323333333321 13689999
Q ss_pred eCCCh
Q 019012 233 DNVGG 237 (347)
Q Consensus 233 d~~g~ 237 (347)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99873
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0026 Score=56.03 Aligned_cols=81 Identities=20% Similarity=0.175 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+...+++... +.+|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999999999999999998889999999999988776665222221 12355554233333333221 368999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
+.+.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999874
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0027 Score=55.13 Aligned_cols=81 Identities=23% Similarity=0.341 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC-Ce--eeecCCHHHHHHHHHHHC--CCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF-DE--AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~--vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
..++++||+||+|++|..++..+...|++|+++++++++.+.+.+.+ +. .. ..|..+.+++.+.+.+.. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999999999999999999989999999999988766554222 21 11 234444323433333321 236
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 87 ~d~li~~ag 95 (258)
T PRK06949 87 IDILVNNSG 95 (258)
T ss_pred CCEEEECCC
Confidence 899999988
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0027 Score=55.07 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---e-eeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---E-AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~-vi~~~~~~~~~~~i~~~~~--g 226 (347)
++.++||+||+|++|...+..+...|++|++++++.++.+.+.+++ +.. . ..|..+++++...+.+... +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999889999999998887765543233 211 1 3355554234343443221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999875
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0058 Score=54.60 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=64.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH--hH----HHHHHHcCCCe---eeecCCHHHHHHHHHHHC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ--KV----DLLKNKLGFDE---AFNYNDETDLVAALKRCF--P 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~--~~----~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~--~ 225 (347)
.++++||+||+|++|.+++..+...|++|+++.++.+ +. +.++ ..|... ..|..+.+++.+.+.+.. .
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999889999988776432 11 2222 334321 235554423333333322 1
Q ss_pred CCccEEEeCCChh---------------------------hHHHHHHhhhcCCeEEEEccccc
Q 019012 226 QGIDIYFDNVGGE---------------------------MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 226 g~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+++|++|.+.|.. ..+.+++.+.++|+++.++....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 3699999988731 11223444566789988876443
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.003 Score=54.85 Aligned_cols=80 Identities=19% Similarity=0.242 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.|.++||+||+|++|..++..+...|++|++++++..+.+.+.+.++.. ...|..+.++....+.+... +.+|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999988888999999988776555544244432 23455554233333333322 368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 89 i~~ag 93 (255)
T PRK05717 89 VCNAA 93 (255)
T ss_pred EECCC
Confidence 99887
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00051 Score=65.14 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=64.6
Q ss_pred hhcCCCCCCEEE----EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVF----VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vL----I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
...++++|+++| |+||+|++|.+++|+++..|++|+++...+.+....+ ..+.. .++|.+.. ...+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~- 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY- 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH-
Confidence 346778999988 9998999999999999999999999886665433333 33443 35555543 3333333211
Q ss_pred CCccEEEeCCChhhHHHHHHhhhcCCeEEEEccccc
Q 019012 226 QGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 226 g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
..+...++.|.++|+++.++....
T Consensus 104 ------------~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 104 ------------EFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred ------------HHHHHHHHhccCCCEEEEEccccc
Confidence 245566777777888888776433
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0026 Score=56.05 Aligned_cols=80 Identities=20% Similarity=0.321 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.+..+...|++|++++++.++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999999889999999998877665543232 332 1245554423333333321 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|++.|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0035 Score=56.58 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC---C-e--eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---D-E--AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---~-~--vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++.. . . .+|..+.+++...+.+.. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999998888899999999988876655434421 1 1 235554423333333321 2369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0029 Score=54.11 Aligned_cols=80 Identities=13% Similarity=0.132 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCe-eeecCCHHHHHHHHHHHCC--CCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDE-AFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~-vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
+++++||+||+|.+|..+++.+...|++|++++++.++.....++ .+... ..|..+.+++...+.+... +++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 478999999999999999999888899999999977653332212 23321 2344443233333333221 36899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
+|.+.|
T Consensus 86 vi~~ag 91 (239)
T PRK12828 86 LVNIAG 91 (239)
T ss_pred EEECCc
Confidence 999876
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.012 Score=48.81 Aligned_cols=78 Identities=26% Similarity=0.334 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC-eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD-EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
++.+++|+||+|++|..++..+...|++|+++.++.++.+.+.+++ +.. ...+..+.+++.+.++ ++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence 5789999999999999988888888999999999888776655333 222 1223333213333332 48999
Q ss_pred EeCCChhh
Q 019012 232 FDNVGGEM 239 (347)
Q Consensus 232 id~~g~~~ 239 (347)
|.++....
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99887543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0037 Score=57.03 Aligned_cols=94 Identities=19% Similarity=0.135 Sum_probs=68.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcC---C-CeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLG---F-DEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g---~-~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.+|||+|+ |.+|+.+++.+-..| .+|++.+++.++.+.+. ... . ...+|-.+.+.+.+.|++ +|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-----~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIKD-----FDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHhc-----CCEEEE
Confidence 47999997 999999999988888 69999999999888887 443 2 345666654234444442 699999
Q ss_pred CCChhhHHHHHHhh-hcCCeEEEEccc
Q 019012 234 NVGGEMLDAALLNM-RDHGRIAVCGMV 259 (347)
Q Consensus 234 ~~g~~~~~~~~~~l-~~~G~~v~~g~~ 259 (347)
+.....-..+++++ +.+=.++.+...
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcccC
Confidence 99987555666554 445566666543
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0033 Score=54.63 Aligned_cols=81 Identities=23% Similarity=0.312 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+.+ |.. ...|..+.+++...+.+.. .+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999988888999999999887655433222 321 1235554423333333322 2368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.004 Score=53.79 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+++++||+|++|++|+.+++.+...|++|++++++.++.+.+.++ .+.. ..+|..+.+++.+.++.... +.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999988999999999988765544322 2332 22344443233333333221 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0035 Score=55.50 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-e--eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-E--AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++.++||+||+|++|...+..+...|++|++++++.++.+...+++ +.. . ..|..+.+++...+.+.. .+.+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999988889999999998876555443232 322 1 234444323333333221 2368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0039 Score=54.66 Aligned_cols=82 Identities=26% Similarity=0.389 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC---CC------eeeecCCHHH---HHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FD------EAFNYNDETD---LVAALKRC 223 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g---~~------~vi~~~~~~~---~~~~i~~~ 223 (347)
-.|+.+||+|++.++|.+.+..+...|++|+.+.+++++.+...+++. .. .+.|.+..++ +.+...+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999987766553322 21 2345554312 22333333
Q ss_pred CCCCccEEEeCCCh
Q 019012 224 FPQGIDIYFDNVGG 237 (347)
Q Consensus 224 ~~g~~d~vid~~g~ 237 (347)
..|..|+++++.|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 34679999998873
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0029 Score=54.91 Aligned_cols=79 Identities=15% Similarity=0.212 Sum_probs=54.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-ee--eecCCHHHHHHHHHHHCC--CCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-EA--FNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~v--i~~~~~~~~~~~i~~~~~--g~~d 229 (347)
|+++||+||+|++|...++.+...|++|++++++.++.+.+.+.+ +.. .. .|..+++++...+.+... +.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999999999999999887665544222 211 12 354444244443333321 3689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 81 ~lI~~ag 87 (252)
T PRK07677 81 ALINNAA 87 (252)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0031 Score=60.95 Aligned_cols=80 Identities=24% Similarity=0.326 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
+++++||+||++++|.+.++.+...|++|+.++++.++.+.+.++++.. ..+|..+++++...+.+.. .+.+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999999999999999999988877665466542 2356555434444443332 1469999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 84 i~nag 88 (520)
T PRK06484 84 VNNAG 88 (520)
T ss_pred EECCC
Confidence 99876
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0049 Score=52.31 Aligned_cols=78 Identities=18% Similarity=0.223 Sum_probs=56.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+++||+||+|++|...++.+...|++|++++++.++.+.++ ..+.. ...|..+.+.+...+.+...+.+|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47999999999999999888788999999999888777776 55543 23455554234433333333379999998763
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0049 Score=53.65 Aligned_cols=79 Identities=22% Similarity=0.214 Sum_probs=55.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----C-eeeecCCHHHHHHHHHHHCC--CCccE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----D-EAFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
+.++||+||+|++|...+..+...|++|++++++.++.+.+.+++.. . ..+|..+.+++.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999988888899999999988876665533321 1 12455554244443333322 35899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++.+.|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999887
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0042 Score=53.99 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHh-HHHHHH---HcCC-C-ee--eecCCHHHHHHHHHHHCC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQK-VDLLKN---KLGF-D-EA--FNYNDETDLVAALKRCFP 225 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~-~~~~~~---~~g~-~-~v--i~~~~~~~~~~~i~~~~~ 225 (347)
+..+.++||+||+|++|.+.++-+... |++|+++++++++ .+.+.+ ..+. . ++ +|..+.+++.+.+++...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999999999999988877666 5899999998765 443321 2232 1 22 354443233333443322
Q ss_pred -CCccEEEeCCCh
Q 019012 226 -QGIDIYFDNVGG 237 (347)
Q Consensus 226 -g~~d~vid~~g~ 237 (347)
+.+|+++.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 479999987763
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0044 Score=54.64 Aligned_cols=80 Identities=20% Similarity=0.232 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--C---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--D---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++. . ...|-.+.+.+.+.+.+... +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999988888899999999877655544424432 1 12455554233333332211 4699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 97 ~li~~Ag 103 (280)
T PLN02253 97 IMVNNAG 103 (280)
T ss_pred EEEECCC
Confidence 9999886
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0038 Score=53.94 Aligned_cols=79 Identities=23% Similarity=0.305 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
.++++||+||+|++|.+.+..+...|++|++++++... .+.++ +.+.. ...|..+.+++...+++... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999998899999999986531 22333 44421 12455544344444443321 3699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9999886
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0053 Score=52.44 Aligned_cols=80 Identities=9% Similarity=0.125 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHH---HHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALK---RCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~---~~~~g~ 227 (347)
+++++||+||++++|.+.+..+...|++|+++.++.++.+.+.++ .+.. ..+|..+.+++...+. +..++.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999998888888999999999988876554322 2432 1234444323333333 322326
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0042 Score=54.71 Aligned_cols=104 Identities=12% Similarity=0.128 Sum_probs=68.4
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKLGFD--EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+ +++|+++++.+...|++|++++++++ +.+.+.++++.. ..+|-.+.++....+.+... +.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 47899999996 69999999988889999999988752 334343245532 23465554344444443322 47
Q ss_pred ccEEEeCCChh------------------------------hHHHHHHhhhcCCeEEEEcccc
Q 019012 228 IDIYFDNVGGE------------------------------MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 228 ~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
+|+++++.|.. ..+..+..|.++|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 99999988720 0133455677789998887643
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0053 Score=52.25 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=54.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++||+||+|++|.+.++.+...|++|+.+.++.++.+.+.++++.. ...|..+.+++.+.+++.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 5899999999999999999888999999999888776665355543 2346555434444444432 25899998764
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0062 Score=52.31 Aligned_cols=80 Identities=19% Similarity=0.295 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC-C---eeeecCC---H--HHHHHHHHHHC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF-D---EAFNYND---E--TDLVAALKRCF 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~-~---~vi~~~~---~--~~~~~~i~~~~ 224 (347)
++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++ +. . ..+|..+ . ..+.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999988889999999999987765543232 21 1 1133321 1 12334444444
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
.+.+|++|.+.|
T Consensus 85 ~~~id~vi~~ag 96 (239)
T PRK08703 85 QGKLDGIVHCAG 96 (239)
T ss_pred CCCCCEEEEecc
Confidence 346899999887
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.004 Score=54.74 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
+++++||+||++++|.+.++.+...|++|++++++ ++.+.+.+++ +.. ..+|..+.++....+.+.. .+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999998888889999999988 4433322132 321 2345555423333333322 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 84 d~li~~Ag 91 (272)
T PRK08589 84 DVLFNNAG 91 (272)
T ss_pred CEEEECCC
Confidence 99999886
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0055 Score=53.35 Aligned_cols=78 Identities=23% Similarity=0.383 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC-e--eeecCCHHHHHHHHHHHCCCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD-E--AFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
.+.++||+|+++++|...++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.+++...+++. +.+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4789999999999999999988889999999999887665544222 221 1 23544442444444332 4699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 84 ~lv~~ag 90 (259)
T PRK06125 84 ILVNNAG 90 (259)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0052 Score=52.66 Aligned_cols=78 Identities=14% Similarity=0.194 Sum_probs=53.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH-HHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
++++||+||++++|.+.++.+...|++|+++++++++. +.++ ..++. ...|..+.++....+.+... +++|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 46899999999999999998888999999999876532 3344 45542 12454443234443433322 36899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 81 ~ag 83 (236)
T PRK06483 81 NAS 83 (236)
T ss_pred CCc
Confidence 887
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0042 Score=54.15 Aligned_cols=77 Identities=27% Similarity=0.306 Sum_probs=53.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC--eeeecCCHHHHHHHHHHHC--CCCccEEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD--EAFNYNDETDLVAALKRCF--PQGIDIYF 232 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~--~vi~~~~~~~~~~~i~~~~--~g~~d~vi 232 (347)
++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +-. ...|..+.+++.+.+.+.. .+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999988889999999999887665544233 211 1245554424444444332 24699999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
.+.|
T Consensus 82 ~naG 85 (259)
T PRK08340 82 WNAG 85 (259)
T ss_pred ECCC
Confidence 9887
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0049 Score=53.60 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
.+.++||+||+|++|...++.+...|++|++++++.++.+.+.++++.. ...|-.+.++....+.+.. .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3678999999999999999999889999999999988776665344421 1234444323333333321 1368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 85 i~~ag 89 (257)
T PRK07067 85 FNNAA 89 (257)
T ss_pred EECCC
Confidence 99876
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0038 Score=55.93 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. ..+|..+.++....+.++.. +
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999999999999999988888999999999877654432122 111 12355444233333433322 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6899999887
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0046 Score=53.82 Aligned_cols=80 Identities=26% Similarity=0.367 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++.++||+||+|++|...++.+...|++|++++++.++.+.+.+.+ +.. ..+|..+.+++...+.++.. +.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999889999999999887665554222 221 23455554233333333221 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 91 d~vi~~ag 98 (259)
T PRK08213 91 DILVNNAG 98 (259)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.022 Score=49.85 Aligned_cols=109 Identities=16% Similarity=0.207 Sum_probs=76.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--C-C-CeeeecCCHH---HHHHHHHHHCCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--G-F-DEAFNYNDET---DLVAALKRCFPQ 226 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--g-~-~~vi~~~~~~---~~~~~i~~~~~g 226 (347)
...++..|||+|+.+++|...+.-+...|.+|++.|..++..+.++.+. + . +-.+|..+++ ...+.+++..+.
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 3456778999999999999999999999999999998877666665222 1 1 2245666552 345667777766
Q ss_pred -CccEEEeCCChh------------hH---------------HHHHHhhhc-CCeEEEEcccccc
Q 019012 227 -GIDIYFDNVGGE------------ML---------------DAALLNMRD-HGRIAVCGMVSLH 262 (347)
Q Consensus 227 -~~d~vid~~g~~------------~~---------------~~~~~~l~~-~G~~v~~g~~~~~ 262 (347)
+.--+++++|-. .+ ...+.++++ .||+|.++...+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 788889988711 11 223445554 7999999987764
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0049 Score=53.23 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC---CeeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF---DEAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~---~~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|...++.+...|++|+++++++++.+.+.+.+ +. ....|..+.+++...+.+.. .+.+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999988888999999999876554443222 21 12345554323332222221 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 85 d~vi~~ag 92 (250)
T PRK07774 85 DYLVNNAA 92 (250)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0059 Score=53.29 Aligned_cols=81 Identities=22% Similarity=0.320 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--CC--C-eeeecCCHHHHHHHHHHHC-CCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--GF--D-EAFNYNDETDLVAALKRCF-PQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--g~--~-~vi~~~~~~~~~~~i~~~~-~g~~d~ 230 (347)
++.++||+||+|++|...+..+...|++|+++++++++.+.+.+++ +. . ...|..+.+.+.+.++... .+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999988889999999999988766665332 11 1 1234444322222222221 247899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0047 Score=53.71 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.++++||+||+|++|...+..+...|++|++++++.++.+.+.+++ +.. ..+|..+.++....+.+.. .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999887665544232 221 1235544323333333321 13
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 69999999973
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0027 Score=55.62 Aligned_cols=77 Identities=19% Similarity=0.365 Sum_probs=53.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid~ 234 (347)
+.+++|+||+|++|...++.+...|++|++++++.++.+.. .++. ...|..+.+++.+.+.+.. .+.+|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 56899999999999999998888899999999886654322 1332 2346555434444444332 2368999999
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 983
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0053 Score=53.46 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=74.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC--
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV-- 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~-- 235 (347)
..|.|+|+ |.+|.-++.+|.-+|++|+..+.+.+|+..+.+.++-. ++.-++.. ++.+.+.+ .|++|.++
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~-~iee~v~~-----aDlvIgaVLI 241 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPS-NIEEAVKK-----ADLVIGAVLI 241 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHH-HHHHHhhh-----ccEEEEEEEe
Confidence 45677776 99999999999999999999999999999998666664 33434433 55555543 89998865
Q ss_pred -Chh----hHHHHHHhhhcCCeEEEEccccccc
Q 019012 236 -GGE----MLDAALLNMRDHGRIAVCGMVSLHS 263 (347)
Q Consensus 236 -g~~----~~~~~~~~l~~~G~~v~~g~~~~~~ 263 (347)
|.. ..++..+.|++++.++.+..-.+..
T Consensus 242 pgakaPkLvt~e~vk~MkpGsVivDVAiDqGGc 274 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPGSVIVDVAIDQGGC 274 (371)
T ss_pred cCCCCceehhHHHHHhcCCCcEEEEEEEcCCCc
Confidence 221 5788899999999999987655443
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0063 Score=49.35 Aligned_cols=80 Identities=16% Similarity=0.280 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++..++|.||++++|...+..+...|++|++++++.++.+.+.+++ +.. ...|..+.+++.+.+.+.. .|.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999888888999999998876554332132 322 1234433323333332211 1468
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 95 DilVnnAG 102 (169)
T PRK06720 95 DMLFQNAG 102 (169)
T ss_pred CEEEECCC
Confidence 88988877
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.006 Score=52.42 Aligned_cols=82 Identities=16% Similarity=0.235 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
..+.++||+||+|++|..++..+...|++|+++++++++.+.+.+.+ +.. ...|..+.+++...+++... +.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999889999999999887665544222 221 12354443233333333221 36
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999998873
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0046 Score=53.69 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=54.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
++++||+||+|++|...++.+...|++|++++++.++.+.+.+++ +.. ...|..+++.+.+.+.+.. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999889999999999877655544232 221 1235555423333333322 13689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 82 ~vi~~ag 88 (256)
T PRK08643 82 VVVNNAG 88 (256)
T ss_pred EEEECCC
Confidence 9999886
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0048 Score=53.58 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=52.5
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC----eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD----EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+ +++|.+.++.+...|++|++++++++..+.++ ++... ..+|-.+.++..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999998 69999999888889999999988744333343 33211 12455544233333333221 469
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99999887
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0019 Score=53.94 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=70.7
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC---
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF--- 224 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~--- 224 (347)
.+..+.++||-+| +.+|+.++.+|+.+ +.+|+.++.++++.+.+++ +.|...-++.... +..+.+.++.
T Consensus 41 ~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~~ 117 (205)
T PF01596_consen 41 VRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELANDG 117 (205)
T ss_dssp HHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHTT
T ss_pred HHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhcc
Confidence 4445678999999 78899999999987 5699999999988877753 3455332332222 4444444432
Q ss_pred -CCCccEEE-eCCCh---hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 -PQGIDIYF-DNVGG---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 -~g~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|| |+.-. ..++.++++|+++|.++.=..
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN~ 156 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADNV 156 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEETT
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEccc
Confidence 23699996 66543 367889999999999886543
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.016 Score=50.53 Aligned_cols=80 Identities=13% Similarity=0.133 Sum_probs=52.5
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECCh---HhHHHHHHHc-CCC---eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSS---QKVDLLKNKL-GFD---EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~---~~~~~~~~~~-g~~---~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||+ +++|.++++.+...|++|++++++. ++.+.+.+++ +.. ..+|-.+.++....+++...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999986 7999998888888999999887543 3444444344 211 22455554344444443322
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
|.+|+++.+.|
T Consensus 86 g~ld~lv~nag 96 (257)
T PRK08594 86 GVIHGVAHCIA 96 (257)
T ss_pred CCccEEEECcc
Confidence 46999998876
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0057 Score=52.81 Aligned_cols=79 Identities=20% Similarity=0.321 Sum_probs=54.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC-e--eeecCCHHHHHHHHHHHCC--CC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD-E--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~-~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
++++||+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. + .+|..+.+++.+.++++.. ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999988888888999999999887665543221 211 1 2455554344443443322 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 899999887
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0025 Score=55.84 Aligned_cols=102 Identities=19% Similarity=0.241 Sum_probs=62.3
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
.+.+.+++++|++||-+|+ +-|-.++.+|+..|++|++++.|+++.+++++ +.|...-+..... ++ +++.
T Consensus 53 ~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~~~ 125 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RDLP 125 (273)
T ss_dssp HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG--
T ss_pred HHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----cccC
Confidence 3446688999999999993 47888999999999999999999998888763 3454211111110 21 1111
Q ss_pred CCCccEEEe-----CCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFD-----NVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
+.||.|+. ..|. ..++.+.+.|+|+|+++.-.
T Consensus 126 -~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 126 -GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred -CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 26888764 3442 25788889999999997543
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.005 Score=53.44 Aligned_cols=75 Identities=17% Similarity=0.323 Sum_probs=52.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
+.++||+||+|++|..+++.+...|++|+++++++.+.+.+.+ ..+.. ...|..+. . .+.+...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-I---DRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-H---HHHHHhcCCCCEE
Confidence 4689999999999999999999999999999998776555441 22221 12355543 1 2333333479999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99887
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0064 Score=53.51 Aligned_cols=78 Identities=23% Similarity=0.322 Sum_probs=55.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
.++||+||+|++|...++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+.+.+.+.. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999999999999888888999999999988777665333321 1245554423444343322 136899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 83 ~ag 85 (276)
T PRK06482 83 NAG 85 (276)
T ss_pred CCC
Confidence 887
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0066 Score=52.99 Aligned_cols=80 Identities=15% Similarity=0.251 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKLGFDE--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.|+.+||+||++ ++|.+.++.+...|++|+.+++++. ..+.+.++.|... .+|-.++++....+.+... |.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999986 8999998888888999999887642 2233332334322 2465554344444433322 46
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999876
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0047 Score=53.39 Aligned_cols=81 Identities=16% Similarity=0.216 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--CCC-e--eeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--GFD-E--AFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--g~~-~--vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
++.++||+||+|++|...++.+...|++|++++++.++.+...+.+ +.. . ..|..++++..+.+.+... +.+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999999888888999999999877655444233 221 1 2354444233333333221 3689
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99998883
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0055 Score=53.15 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|.+.++.+...|++|+.++++.++.+.+.+++ +.. ...|-.+.+++...+.+.. .+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4779999999999999999999889999999999877655443232 221 1234444423333333221 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 88 d~vi~~ag 95 (254)
T PRK08085 88 DVLINNAG 95 (254)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0066 Score=52.68 Aligned_cols=79 Identities=18% Similarity=0.263 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
.++++||+||++++|.+.++.+...|++|+++++++.. .+.++ +.+.. ..+|..+.+++...+.+.. .+.+|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999998999999988775432 12233 44432 1245555434444444332 23699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=47.67 Aligned_cols=98 Identities=21% Similarity=0.332 Sum_probs=68.9
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHHCC
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~~ 225 (347)
..++++|+.++=.|+ +.|..+++++...- .+|+++++++++.+..++ +||.+. ++....+ +.+....
T Consensus 29 ~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap----~~L~~~~- 101 (187)
T COG2242 29 KLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP----EALPDLP- 101 (187)
T ss_pred hhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch----HhhcCCC-
Confidence 457899998888885 45777888885553 499999999988777642 578763 4444333 3333221
Q ss_pred CCccEEEeCCCh---hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFDNVGG---EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g 257 (347)
.+|.+|=.-|. ..++.+|..|+++|++|.-.
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 58998865543 37899999999999998653
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0095 Score=53.67 Aligned_cols=94 Identities=18% Similarity=0.190 Sum_probs=63.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+|||+||+|-+|...+..+...|.+|++.+++.++...+. ..++..+ .|..+++++.+.++ ++|+||.+.+..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al~-----g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSFK-----GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHHC-----CCCEEEECCCCC
Confidence 6999999999999999999889999999999877655555 5565322 24444323333332 489999987531
Q ss_pred -------------hHHHHHHhhhcCC--eEEEEccc
Q 019012 239 -------------MLDAALLNMRDHG--RIAVCGMV 259 (347)
Q Consensus 239 -------------~~~~~~~~l~~~G--~~v~~g~~ 259 (347)
.....+++++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1134455565554 78887763
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0058 Score=53.28 Aligned_cols=80 Identities=21% Similarity=0.303 Sum_probs=53.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+.++||+||+|++|..+++.+...|++|+++++++++.+.+.+. .+.. ...|..+.+.+...+.+... +++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999999999888999999999987765544322 2321 12344443233333333321 3689
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999873
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0054 Score=53.94 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChHhH---HHHHHHcCCCe--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKV---DLLKNKLGFDE--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~~~---~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+++++||+||++ ++|.++++.+...|++|++++++++.. +.+.+++|... ..|-.+.++....+.+... |.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999986 999999999888999999988765322 22322345322 2455554334333333322 47
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999887
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0059 Score=52.86 Aligned_cols=80 Identities=20% Similarity=0.316 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-e--eeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-E--AFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++.++||+||+|++|.+.++.+...|++|+.++++.++.+.+.+++ +.. . .+|..+.++....+.+... +.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999877655544232 221 1 1344443233333333221 358
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 87 d~li~~ag 94 (252)
T PRK07035 87 DILVNNAA 94 (252)
T ss_pred CEEEECCC
Confidence 99998887
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.006 Score=52.85 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|...++.+...|++|+.+++++++.+.+.+ +.+.. ...|..+.+++...+.+.. .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999998888889999999998876544331 23321 1234444323333333221 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 86 d~li~~ag 93 (253)
T PRK06172 86 DYAFNNAG 93 (253)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0057 Score=53.16 Aligned_cols=79 Identities=22% Similarity=0.340 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH----HHHHHHcC-C-CeeeecCCHHHH---HHHHHHHCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV----DLLKNKLG-F-DEAFNYNDETDL---VAALKRCFPQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~----~~~~~~~g-~-~~vi~~~~~~~~---~~~i~~~~~g 226 (347)
-.|+.|||+||.+++|++.++=.-.+|++++..+.+.+-. +.++ +.| + ..++|-++.++. .+++++.. |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEV-G 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence 4789999999999999886666666799888888877533 3333 334 2 245665554343 34444433 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++++.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 6999999888
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.016 Score=49.74 Aligned_cols=80 Identities=20% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHH---HcCCC-e--eeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKN---KLGFD-E--AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++.++||+||+|++|...++.+...|++|+.+.++.. +.+.+.+ ..+.. . .+|..+.+++.+.+++.. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999888776533 2222211 22321 1 234444323333333321 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 84 id~vi~~ag 92 (245)
T PRK12937 84 IDVLVNNAG 92 (245)
T ss_pred CCEEEECCC
Confidence 899999887
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.008 Score=52.86 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-----CC-ee--eecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-----FD-EA--FNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-----~~-~v--i~~~~~~~~~~~i~~~~~--g 226 (347)
++.++||+|++|++|..+++.+...|++|+.++++.++.+...+++. .. .+ .|..+++++...+++... +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36799999999999999999999999999999998766544432321 11 11 354443233333433321 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999887
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.013 Score=52.27 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.+.++||+||++++|.+.++.+...|++|+++.++. ++.+.+.+ +.+.. ...|..+.++....+.+... +
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 567999999999999999999988999999877543 22333321 22321 22455554234444443322 3
Q ss_pred CccEEEeCCChh---------------------------hHHHHHHhhhcCCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE---------------------------MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
++|+++.+.|.. ..+.++..+.++|+++.++....
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 689999887621 11233444556789998876543
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.01 Score=55.57 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=85.3
Q ss_pred CCCCceecceEEEEeccCCCCCCCCCEEE-E-----e--------------cCcceeEEeeccccceecCCCCCCChhhh
Q 019012 75 VPGQPVEGFGVSKVVDSDNPNFKPGDLVA-G-----L--------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 75 i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~-~-----~--------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
.-|.|+++ .+.+|+++.+..-+|+.=+ + + +.|++++.++. . +..- .. ++
T Consensus 89 ~~~~~a~~--hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~-vr~~--t~---i~-- 157 (417)
T TIGR01035 89 LTGESAVE--HLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-R-VRTE--TD---IS-- 157 (417)
T ss_pred cCchHHHH--HHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-h-hhhh--cC---CC--
Confidence 45677666 7778888776655555332 0 0 36777777765 2 3220 00 10
Q ss_pred hhhcCChhhhHHHHH---HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 135 IGLLGMPGFTAYAGF---HEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 135 ~a~l~~~~~ta~~al---~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
..+...++.++ .+..+..++++++|+|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .++.
T Consensus 158 ----~~~vSv~~~Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~ 231 (417)
T TIGR01035 158 ----AGAVSISSAAVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF 231 (417)
T ss_pred ----CCCcCHHHHHHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH
Confidence 11112222221 12233467899999996 9999999999999995 8999999988765444377763 3332
Q ss_pred CCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 211 NDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
. ++.+.+. ++|+||+|++..
T Consensus 232 ~---~l~~~l~-----~aDvVi~aT~s~ 251 (417)
T TIGR01035 232 E---DLEEYLA-----EADIVISSTGAP 251 (417)
T ss_pred H---HHHHHHh-----hCCEEEECCCCC
Confidence 1 3333333 499999999863
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0087 Score=51.36 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe-e--eecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE-A--FNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~-v--i~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++.++||+||+|.+|...++.+...|.+|+++++++++.+.+.+ ..+... . .|..++..+.+.+.+... +.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35789999999999999999988899999999998876544332 233321 1 455554234443433221 358
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998864
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0067 Score=52.07 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.+.++||+|++|++|...+..+...|++|++++++.++.+.+.++ .+.. ...|..+.+++...+++... +++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 357899999999999999998888999999999987765443312 2221 12344443244444443321 368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999998863
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0076 Score=53.03 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=54.0
Q ss_pred CCCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECCh---HhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHC--C
Q 019012 155 PKSGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSS---QKVDLLKNKLGFD--EAFNYNDETDLVAALKRCF--P 225 (347)
Q Consensus 155 ~~~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~ 225 (347)
+-.++++||+||+ +++|++.++.+...|++|+.+.+++ ++.+.+.++++.. ...|-.+.++....+.+.. .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 3457899999996 7999999999888999999887764 3334443345532 2245554423443333332 2
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|+++.+.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 46899999886
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0073 Score=52.55 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe---eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE---AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+ +.+... ..|..+.+.+.+.+.+.. .+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999998866544432 234321 135444423333333221 1368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998873
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0066 Score=52.77 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH--HcCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--KLGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
++.++||+||+|++|...++.+...|++|+++++++++.+..++ +.+.. ...|..+.+++...+.+... +++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 46799999999999999998888899999999988776533331 22321 22455544234433433322 3689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 86 ~vi~~ag 92 (258)
T PRK08628 86 GLVNNAG 92 (258)
T ss_pred EEEECCc
Confidence 9999988
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.01 Score=51.54 Aligned_cols=80 Identities=24% Similarity=0.336 Sum_probs=54.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC---CC-eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FD-EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g---~~-~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
++++||+||+|++|...+..+...|++|++++++.++.+.+.+.+. +. ...|..+.+++...+.+... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999999999999988888889999999998877665542332 11 12455544233333333221 368999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999873
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0071 Score=52.59 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++++++|+||+|++|...++.+...|++ |++++++.++.....+ ..+.. ..+|..+.+.+.+.+.... .++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5689999999999999999999999997 9999988765443221 23332 2245555423333333221 136
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999873
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0099 Score=51.53 Aligned_cols=80 Identities=23% Similarity=0.314 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
++.++||+||+|.+|...++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+.. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3579999999999999999988888999999999887665543232 321 2245555423333333221 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.+
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99999886
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0029 Score=55.11 Aligned_cols=75 Identities=16% Similarity=0.233 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCC--CCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP--QGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--g~~d~vid~ 234 (347)
.|+++||+||++++|.+.+..+...|++|+++++++.+...+. ...+|..+++++.+.+.+... +.+|+++.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999999999999999999999999999998765321110 122455554233333333321 368999998
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 87
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0089 Score=53.77 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=54.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC--C--e--eeecCCHHHHHHHHHHHC--CCCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF--D--E--AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~--~--~--vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
+.++||+||++++|.+.++.+...| ++|+++++++++.+.+.++++. . . .+|..+.++....+.++. .+.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999999999999888888889 8999999988776655434432 1 1 245554423333333322 2368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 83 D~lI~nAG 90 (314)
T TIGR01289 83 DALVCNAA 90 (314)
T ss_pred CEEEECCC
Confidence 99999876
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.013 Score=52.66 Aligned_cols=100 Identities=20% Similarity=0.276 Sum_probs=69.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
+...++++++||..|+ | .|..++.+++..+. +|++++.+++..+.+++ +.|.+.+..... +..+.+.. .
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--c
Confidence 4466889999999995 4 69999999998864 79999999886666552 356654332222 22222211 1
Q ss_pred CCccEEEeCCChh-hHHHHHHhhhcCCeEEEE
Q 019012 226 QGIDIYFDNVGGE-MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 226 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 256 (347)
+.||+|+.+.+.. .....++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 3699999987753 455778899999998774
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.018 Score=47.56 Aligned_cols=97 Identities=19% Similarity=0.172 Sum_probs=62.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC-C-CEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCC-Cc
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH-G-CYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQ-GI 228 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G-~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g-~~ 228 (347)
..+++|++||.+|+ |+-+. +..+++.. + .+|++++.++.+ . ..++..+ .|..+. ...+.+++..++ ++
T Consensus 28 ~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKV 99 (188)
T ss_pred cccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCc
Confidence 45689999999995 54444 44444443 3 489999998754 2 2344321 244443 444556555555 89
Q ss_pred cEEEe-CC----C-------------hhhHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYFD-NV----G-------------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vid-~~----g-------------~~~~~~~~~~l~~~G~~v~~g 257 (347)
|+|+. .. | ...+..+.++|+++|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 99995 21 2 135677889999999998754
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0098 Score=55.36 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.+.++||.|+ |++|.+++..+...|+ +++++.++.++.+.+.++++-..++.+. ++.+.+. .+|+||.|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence 45789999996 9999999999999997 8999999988777666466522233221 2222232 49999999
Q ss_pred CChh
Q 019012 235 VGGE 238 (347)
Q Consensus 235 ~g~~ 238 (347)
++.+
T Consensus 250 T~a~ 253 (414)
T PRK13940 250 VNVL 253 (414)
T ss_pred cCCC
Confidence 9975
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0096 Score=52.42 Aligned_cols=80 Identities=16% Similarity=0.247 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.+.++||+||+|++|++.+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+... +.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999899999999999876654443232 321 12344443233333333221 468
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.014 Score=50.94 Aligned_cols=104 Identities=16% Similarity=0.115 Sum_probs=72.0
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC-
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF- 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~- 224 (347)
...+..+.++||=+| +.+|..++.+|+.++ .+|+.++.+++..+.+++ +.|...-++.... +..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence 445667789999999 678999999998874 489999999987777753 3466433333322 4444444431
Q ss_pred ---CCCccEEE-eCCCh---hhHHHHHHhhhcCCeEEEEc
Q 019012 225 ---PQGIDIYF-DNVGG---EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ---~g~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+|| |+--. ..++.+++.|++||.++.=.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN 228 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN 228 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 23799986 44433 36888999999999987643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0094 Score=51.74 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++.++||+||+|++|...+..+...|++|+.+++++++.+.+.++ .+.. ...|..+.+++...+.+... +.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999988888899999999987665443322 2321 12355544233333333221 368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.011 Score=50.79 Aligned_cols=80 Identities=28% Similarity=0.429 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-E--AFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
++.++||+||+|++|..++..+...|++|+...++.++.+.+.+.++.. . ..|-.+.+.+.+.+.+.. .+++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999999999999999988889999988888777666554344431 1 234444323333333221 1369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 85 i~~ag 89 (245)
T PRK12936 85 VNNAG 89 (245)
T ss_pred EECCC
Confidence 99987
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0062 Score=52.80 Aligned_cols=75 Identities=19% Similarity=0.290 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC--CC-eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--FD-EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g--~~-~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
.++++||+||+|++|...++.+...|++|++++++.++ . ..+ +. ...|..+.+++.+.+.+.. .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999998899999999987654 1 222 21 2345554423333333321 1368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 80 i~~ag 84 (252)
T PRK07856 80 VNNAG 84 (252)
T ss_pred EECCC
Confidence 99887
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0074 Score=52.51 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||++++|.+.++.+...|++|++++++ ++.+.+.+ +.+.. ..+|..+.++....+.+.. .+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999998999999999887 33333321 23321 2245554423333333322 1368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 93 d~li~~ag 100 (258)
T PRK06935 93 DILVNNAG 100 (258)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0076 Score=48.87 Aligned_cols=98 Identities=21% Similarity=0.177 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec------------------CCH--HHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY------------------NDE--TDL 216 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~------------------~~~--~~~ 216 (347)
+..+|+|+|+ |.+|+.|+++++.+|++|++.+...++.+..+ ..+...+... ... ..+
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 3468999996 99999999999999999999999988888887 7766432221 010 133
Q ss_pred HHHHHHHCCCCccEEEeCCC--h---h--hHHHHHHhhhcCCeEEEEccccc
Q 019012 217 VAALKRCFPQGIDIYFDNVG--G---E--MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 217 ~~~i~~~~~g~~d~vid~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
.+.+.. +|++|-+.- + + .-++.++.|+++..++.+..-.+
T Consensus 97 ~~~i~~-----~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 97 AEFIAP-----ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHHHHH------SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHHHhh-----CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 344443 799885331 2 1 34677888998888888865433
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.01 Score=51.54 Aligned_cols=80 Identities=20% Similarity=0.200 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.+.++||+||++++|.++++.+...|++|++++++++ ..+.+.+ ..+.. ...|..++++..+.+.+.. .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4779999999999999999999999999999987653 2222211 22321 1234444423333333322 246
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 87 id~li~~ag 95 (254)
T PRK06114 87 LTLAVNAAG 95 (254)
T ss_pred CCEEEECCC
Confidence 899999987
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.014 Score=50.21 Aligned_cols=81 Identities=28% Similarity=0.375 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhH-HHHHH--HcCCCe---eeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKV-DLLKN--KLGFDE---AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~-~~~~~--~~g~~~---vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++.++||+|++|++|...++.+...|++|++... +..+. +.+.+ ..+... ..|..+.+++.+.+.+.. .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999999887543 22222 22220 234322 245554323333333321 136
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999873
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.011 Score=51.33 Aligned_cols=80 Identities=13% Similarity=0.186 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vi 232 (347)
.+.++||+||+|++|.+.++.+...|++|+++.++. +..+.++ ..++. ..+|..++++..+.+.+.. .+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999888999998876543 3344444 33432 2345555424444343332 13689999
Q ss_pred eCCCh
Q 019012 233 DNVGG 237 (347)
Q Consensus 233 d~~g~ 237 (347)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98863
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0089 Score=51.91 Aligned_cols=80 Identities=20% Similarity=0.296 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.+.++||+||++++|...+..+...|++|+.++++.++.+.+.++ .+.. ...|..+.++..+.+.+... +.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998888999999999887765544312 2321 12455554233333333221 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 90 d~li~~ag 97 (255)
T PRK06113 90 DILVNNAG 97 (255)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.011 Score=51.43 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=52.3
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChHh---HHHHHHHcCCCe--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQK---VDLLKNKLGFDE--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~~---~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.|+++||+||+ +++|.++++.+...|++|++++++++. .+.+.++++... .+|-.+.++....+.+... |.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 47899999997 489999999888899999999887543 233332444322 2354443233333333221 46
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++.+.|
T Consensus 89 ld~lv~nAg 97 (258)
T PRK07533 89 LDFLLHSIA 97 (258)
T ss_pred CCEEEEcCc
Confidence 899999876
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0089 Score=52.99 Aligned_cols=82 Identities=18% Similarity=0.244 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh---------HhHHHHHHHc---CCC---eeeecCCHHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS---------QKVDLLKNKL---GFD---EAFNYNDETDLVAAL 220 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~---------~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i 220 (347)
-++.++||+||++++|.+.++.+...|++|++++++. ++.+.+.+++ +.. ..+|..+.++....+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4578999999999999999988888999999887654 3333332122 322 123555442344334
Q ss_pred HHHC--CCCccEEEeCCCh
Q 019012 221 KRCF--PQGIDIYFDNVGG 237 (347)
Q Consensus 221 ~~~~--~g~~d~vid~~g~ 237 (347)
++.. .+.+|+++.+.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 3332 1469999998873
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.021 Score=49.58 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH-cCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK-LGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~-~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+.+|||+||+|.+|..++..+...|.+|+++.++.++....... .++.. ..|..+. ...+.+....++|++|.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEEC
Confidence 357899999999999999988888899999999887765433201 12221 2344431 112222221258999988
Q ss_pred CChh--------------hHHHHHHhhhcC--CeEEEEccc
Q 019012 235 VGGE--------------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 235 ~g~~--------------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
.|.. .....++.+... ++++.++..
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 7631 123455555543 588887764
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.01 Score=51.62 Aligned_cols=80 Identities=18% Similarity=0.273 Sum_probs=53.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAA--SGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga--~g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.++++||+|| ++++|++.++.+...|++|++++++. +..+.+.++++.. ..+|..+.++....+.+.. .+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 79999999988888999999988653 3334444244421 2345555423333333322 247
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 86 iD~li~nAG 94 (256)
T PRK07889 86 LDGVVHSIG 94 (256)
T ss_pred CcEEEEccc
Confidence 999999886
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.025 Score=48.79 Aligned_cols=76 Identities=20% Similarity=0.353 Sum_probs=50.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHHHc----CCC----eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKNKL----GFD----EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+||+||+|++|...++.+...|++|++++++ .++.+.+.+++ +.. ...|..+.+.+...+.+.. .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999998888889999999987 55544443232 211 1235555424433333322 13689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 82 ~vi~~ag 88 (251)
T PRK07069 82 VLVNNAG 88 (251)
T ss_pred EEEECCC
Confidence 9999987
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.014 Score=50.98 Aligned_cols=81 Identities=21% Similarity=0.229 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.+.++||+||++++|...+..+...|++|+++.+++++.+.+.+.+ +.. ...|-.+.++....+.+... +.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5679999999999999988888888999999998887655443222 332 12455544233333333221 368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0071 Score=48.64 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=51.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC--hHhHHHHHHH---cCCC-ee--eecCCHHHHHHHHHHHC--CCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS--SQKVDLLKNK---LGFD-EA--FNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~--~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~i~~~~--~g~ 227 (347)
+++||+||++++|+..++.+...|. +|+.+.++ .++.+.+.++ .+.. .+ .|..+.+++...+++.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999998888877777 78888888 4444433213 3431 11 34444424444444433 236
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998873
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0093 Score=52.09 Aligned_cols=80 Identities=8% Similarity=0.169 Sum_probs=51.2
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEECChHhHHHHH---HHcCCC--eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAA--SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK---NKLGFD--EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga--~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~---~~~g~~--~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+++++||+|| ++++|++.++.+...|++|+.+.+.+...+.++ ++.+.. ..+|-.+.++..+.+.+... ++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 569999999888889999998866543222232 123322 23455554344434433322 46
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 85 iD~lVnnAG 93 (261)
T PRK08690 85 LDGLVHSIG 93 (261)
T ss_pred CcEEEECCc
Confidence 999999886
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.013 Score=51.14 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH--HcCCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--KLGFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
.+.++||+||+|++|...++.+...|++|++++++++..+.+++ ..+.. ...|..+..+....+.+.. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999998899999999988753333321 22321 1245554323333333221 13689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.036 Score=47.55 Aligned_cols=81 Identities=26% Similarity=0.335 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHH---HcCCC-ee--eecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKN---KLGFD-EA--FNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~---~~g~~-~v--i~~~~~~~~~~~i~~~~~--g~ 227 (347)
.+.++||+|++|.+|...+..+...|++|+++.++..+ .+...+ ..+.. .. .|..+.+++.+.+++... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999998899999777765442 222221 22322 12 255544234333333322 26
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|.++.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998873
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.01 Score=51.79 Aligned_cols=80 Identities=11% Similarity=0.193 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHH----cCCC---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNK----LGFD---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
+++++||+||++++|.+.+..+...|++|+.+.+ ++++.+.+.++ .+.. ..+|..+++++.+.+.+.. .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999988889999988765 34443332212 2321 2245555434444443332 24
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++.+.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999875
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.035 Score=50.61 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=67.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEE--CChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH------------
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLH--GCYVVGSA--GSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR------------ 222 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~--~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~------------ 222 (347)
++|.|+|++|++|..++...+.. .++|++.+ ++.+++....++++...++-.++ .....+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 57999999999999999998776 56888776 33344444443788866554443 22222322
Q ss_pred ------HCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 223 ------CFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 223 ------~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+... .+|+|+.++++ ..+...+.+++.|-++.+...
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANK 123 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANK 123 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCH
Confidence 2222 58999999987 467888889988877776543
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.015 Score=44.80 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeee-cCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFN-YNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~-~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.++.++++.|. | .|...++.+...|.+|++++.++...+.++ +.+...+.+ --++ ++ .+- +++|++...
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEEEe
Confidence 45678999995 7 887666666678999999999999988888 777643321 1111 10 111 257777776
Q ss_pred CCh-hhHHHHHHhhhc
Q 019012 235 VGG-EMLDAALLNMRD 249 (347)
Q Consensus 235 ~g~-~~~~~~~~~l~~ 249 (347)
-.. +.....++..++
T Consensus 85 rpp~el~~~~~~la~~ 100 (134)
T PRK04148 85 RPPRDLQPFILELAKK 100 (134)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 654 344444444444
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.013 Score=52.41 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----------HhHHHHHH---HcCCC---eeeecCCHHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----------QKVDLLKN---KLGFD---EAFNYNDETDLVAAL 220 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----------~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i 220 (347)
.+.++||+||++++|+++++.+...|++|++++++. ++.+.+.+ ..|.. ...|..+.++....+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 478999999999999999999988999999998863 23322221 33321 123544442333333
Q ss_pred HHHCC--CCccEEEeCC-C
Q 019012 221 KRCFP--QGIDIYFDNV-G 236 (347)
Q Consensus 221 ~~~~~--g~~d~vid~~-g 236 (347)
.+... +.+|+++++. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 33221 4689999987 5
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.03 Score=48.44 Aligned_cols=105 Identities=20% Similarity=0.234 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHHHH---cCCC-e--eeecCCHHH---HHHHHHH----
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLKNK---LGFD-E--AFNYNDETD---LVAALKR---- 222 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~~~---~g~~-~--vi~~~~~~~---~~~~i~~---- 222 (347)
.+.++||+||++++|.++++.+...|++|+++. ++.++.+.+.++ .+.. . ..|..+.++ +.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999999999998864 444443332212 2221 1 123333212 2223322
Q ss_pred HCC-CCccEEEeCCChh-----------hH---------------HHHHHhhhcCCeEEEEccccc
Q 019012 223 CFP-QGIDIYFDNVGGE-----------ML---------------DAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 223 ~~~-g~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 261 (347)
..+ +.+|+++.+.|.. .+ +.+++.+++.|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 112 2699999988721 01 224555666799999886544
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.013 Score=50.68 Aligned_cols=75 Identities=20% Similarity=0.280 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcCC-CeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGF-DEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.++++||+||+|++|.+.++.+...|++|++++++.. +.+... .... ....|..+. + .+.+.. +.+|++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~-~---~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKE-E---SLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCH-H---HHHHhc-CCCCEEEEC
Confidence 3689999999999999999999899999999998762 222211 1111 122455443 2 223322 369999999
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
.|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 873
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.024 Score=48.77 Aligned_cols=76 Identities=20% Similarity=0.230 Sum_probs=52.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC--CC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--FD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g--~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.++||+||+|++|...+..+...|++|+++++++++.+.+. ..+ +. ...|..+.+++.+.+++.. ...|.++.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~a 79 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNA 79 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcC
Confidence 57999999999999988888888999999999988777665 332 21 2346555434444444432 2356666555
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
|
T Consensus 80 g 80 (240)
T PRK06101 80 G 80 (240)
T ss_pred c
Confidence 4
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0098 Score=50.79 Aligned_cols=75 Identities=25% Similarity=0.210 Sum_probs=51.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
++++||+||+|++|...++.+...|.+|++++++.++ . ...-....|..+.+.+.+.+.+.... +.|++|.+.|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 5789999999999999999998899999999987654 1 11111234555542444444443333 6899999887
Q ss_pred h
Q 019012 237 G 237 (347)
Q Consensus 237 ~ 237 (347)
.
T Consensus 78 ~ 78 (234)
T PRK07577 78 I 78 (234)
T ss_pred C
Confidence 3
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=50.28 Aligned_cols=81 Identities=19% Similarity=0.223 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC-e--eeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD-E--AFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.+.++||+||+|.+|...+..+...|++|++++++.++...+.+ ..+.. . ..|..+.+++.+.+.+... +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999998888889999999998665443321 22321 1 2344443234443333221 368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998863
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=50.60 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH--hHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ--KVDLLKNKLGFD-E--AFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~--~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
.|.++||+|++|++|.++++.+...|++|+.++++.. ..+.++ ..+.. . .+|-.+.+++.+.+.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999899999998876542 223333 33421 1 2344443234333333221 3689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=56.15 Aligned_cols=73 Identities=16% Similarity=0.163 Sum_probs=54.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.+.++++|+|+|. |.+|++++.+++..|++|++++..+.+.+.++ ++|+. ++.... ..+.++ .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~~---~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTSD---AVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCcc---hHhHhh-----cCCEEEE
Confidence 3567899999995 99999999999999999999997766666666 67874 332221 112232 3799999
Q ss_pred CCCh
Q 019012 234 NVGG 237 (347)
Q Consensus 234 ~~g~ 237 (347)
+.|-
T Consensus 77 SpGi 80 (488)
T PRK03369 77 SPGF 80 (488)
T ss_pred CCCC
Confidence 9985
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.048 Score=47.03 Aligned_cols=103 Identities=18% Similarity=0.209 Sum_probs=63.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhH----HHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKV----DLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~----~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+.++||+||+|.+|...++.+...|++|+.+.++. ++. ..++ +.+.. ...|..+.+++...+.+... +.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 67999999999999999988888999987776432 222 2222 33322 12354443233333332211 36
Q ss_pred ccEEEeCCCh----h-------h---------------HHHHHHhhhcCCeEEEEccccc
Q 019012 228 IDIYFDNVGG----E-------M---------------LDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 228 ~d~vid~~g~----~-------~---------------~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+|++|.+.|. . . .+.+.+.+++.|+++.++....
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 8999999873 0 0 1233445567789999887543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.047 Score=48.07 Aligned_cols=100 Identities=18% Similarity=0.179 Sum_probs=63.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC-CCCccE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF-PQGIDI 230 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~-~g~~d~ 230 (347)
++++||+|+ |++|.+++..+. .|++|+.+++++++.+.+.+++ |.. ..+|..+.+++...+.+.. .+.+|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467899997 899999888875 7999999999877655443232 321 1245555424444443331 247999
Q ss_pred EEeCCChh----h---------------HHHHHHhhhcCCeEEEEccc
Q 019012 231 YFDNVGGE----M---------------LDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 231 vid~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~ 259 (347)
++.+.|.. . ++..+..+.++|+++.+...
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 99998831 1 23344455666777766654
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.03 Score=47.74 Aligned_cols=102 Identities=23% Similarity=0.231 Sum_probs=71.9
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcC---CCeeeecCCHHHHHHHHHHHCCCCc
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG---FDEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
....+|++||=.+ +++|-.++.+++..|- +|++++.|++-++.++++.. ... +.+-.. + .+.+- +.+..|
T Consensus 47 ~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-d-Ae~LP-f~D~sF 120 (238)
T COG2226 47 LGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-D-AENLP-FPDNSF 120 (238)
T ss_pred hCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-c-hhhCC-CCCCcc
Confidence 4456899999887 6789999999999976 99999999998888875433 221 221111 1 01111 223379
Q ss_pred cEEEeCCCh-------hhHHHHHHhhhcCCeEEEEcccc
Q 019012 229 DIYFDNVGG-------EMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 229 d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
|+|.-+.|- ..+++..+.|+|+|+++++....
T Consensus 121 D~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 121 DAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred CEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 999877662 37899999999999999987643
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.016 Score=50.64 Aligned_cols=80 Identities=15% Similarity=0.260 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKLGFD--EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||++ ++|.++++.+...|++|+.+++++. ..+.+.++.+.. ..+|-.+.+++...+.+... +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 478999999975 8999988888889999998887632 223332122321 22455554344444443322 46
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999987
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.028 Score=48.24 Aligned_cols=104 Identities=14% Similarity=0.100 Sum_probs=70.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC-
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF- 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~- 224 (347)
...+..++++||=.| +++|..++.+++..+ .+|+.++.+++..+.+++ +.|...-+..... +..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence 345667788999998 677888888888763 499999999987777763 3455322332222 4444444432
Q ss_pred ---CCCccEEEeCCC-h---hhHHHHHHhhhcCCeEEEEc
Q 019012 225 ---PQGIDIYFDNVG-G---EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ---~g~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+||--.. . ..++.+++.+++||.++.-.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 237999985433 2 46788899999999887644
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.033 Score=47.97 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=71.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC-
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF- 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~- 224 (347)
...+....++||=+| +.+|+.++.+|+.+ +.+|+.++.+++..+.+++ +.|...-++.... +..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~ 149 (247)
T PLN02589 73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE 149 (247)
T ss_pred HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence 345556678999999 78999999999887 4599999999887776653 3465433444333 4455555542
Q ss_pred ----CCCccEEE-eCCCh---hhHHHHHHhhhcCCeEEE
Q 019012 225 ----PQGIDIYF-DNVGG---EMLDAALLNMRDHGRIAV 255 (347)
Q Consensus 225 ----~g~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~ 255 (347)
.+.||+|| |+--. ..++.++++|++||.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 24799997 44432 367888999999999775
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.018 Score=50.00 Aligned_cols=79 Identities=18% Similarity=0.258 Sum_probs=50.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHH---HcCCC-e--eeecCCHHHHHHHHHHHCC--CCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKN---KLGFD-E--AFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++++||+||++++|..+++.+...|++|+.+.+ +.++.+.+.+ ..+.. . .+|..+.+++...+.+... +.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999988764 3333333221 33432 1 2455554233333333221 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 82 d~li~~ag 89 (256)
T PRK12743 82 DVLVNNAG 89 (256)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.013 Score=51.17 Aligned_cols=80 Identities=11% Similarity=0.221 Sum_probs=51.9
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEECC---hHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAA--SGAVGQLVGQLAKLHGCYVVGSAGS---SQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga--~g~~G~~ai~la~~~G~~V~~~~~~---~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+|| ++++|++.++.+...|++|+.+.+. +++.+.+.++++.. ..+|..++++....+.+... +.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999996 5799999888888899999887543 33334343244432 22455554344444443322 47
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 85 iD~lvnnAG 93 (260)
T PRK06997 85 LDGLVHSIG 93 (260)
T ss_pred CcEEEEccc
Confidence 999999876
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.015 Score=50.61 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=52.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCC--e--eeecCCHHHHHHHHHHHC--CCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFD--E--AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~--~--vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++++||+||+|++|.+.+..+...|++|+.++++..+.+.+.++ .+.. . ..|..+.++....+.+.. .+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999998888899999999887655443312 2211 1 234444323333333321 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++.+.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999887
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.017 Score=49.46 Aligned_cols=77 Identities=19% Similarity=0.239 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+.++||+||+|++|...++.+...|+ +|+++.++.++.+. . ..++. ...|..+.+++.+.+++. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-GPRVVPLQLDVTDPASVAAAAEAA--SDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-CCceEEEEecCCCHHHHHHHHHhc--CCCCEEEEC
Confidence 467899999999999999999989999 99999988765432 1 11221 124555442333333332 258999998
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 875
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0079 Score=53.15 Aligned_cols=149 Identities=18% Similarity=0.221 Sum_probs=82.8
Q ss_pred CCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 019012 94 PNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQL 173 (347)
Q Consensus 94 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ 173 (347)
+.+++|++.+....|.+| ..+.....+.+ ... +.+-...=+.+ ..+..+|.+. ..+|++||=.| .+.|.+
T Consensus 106 ~P~~vg~~~~I~P~w~~~-~~~~~~~~I~i-dPg---~AFGTG~H~TT-~lcl~~l~~~--~~~g~~vLDvG--~GSGIL 175 (295)
T PF06325_consen 106 KPIRVGDRLVIVPSWEEY-PEPPDEIVIEI-DPG---MAFGTGHHPTT-RLCLELLEKY--VKPGKRVLDVG--CGSGIL 175 (295)
T ss_dssp --EEECTTEEEEETT-----SSTTSEEEEE-STT---SSS-SSHCHHH-HHHHHHHHHH--SSTTSEEEEES---TTSHH
T ss_pred ccEEECCcEEEECCCccc-CCCCCcEEEEE-CCC---CcccCCCCHHH-HHHHHHHHHh--ccCCCEEEEeC--CcHHHH
Confidence 347789988888888888 33333336677 333 34311111111 1122233222 57889999998 456776
Q ss_pred HHHHHHHCCC-EEEEEECChHhHHHHHH---HcCCCeeee-cCCHHHHHHHHHHHCCCCccEEEeCCChh----hHHHHH
Q 019012 174 VGQLAKLHGC-YVVGSAGSSQKVDLLKN---KLGFDEAFN-YNDETDLVAALKRCFPQGIDIYFDNVGGE----MLDAAL 244 (347)
Q Consensus 174 ai~la~~~G~-~V~~~~~~~~~~~~~~~---~~g~~~vi~-~~~~~~~~~~i~~~~~g~~d~vid~~g~~----~~~~~~ 244 (347)
++..++ +|+ +|++++.++...+.+++ ..|...-+. .... + ...+.||+|+-..-.+ ......
T Consensus 176 aiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~-------~~~~~~dlvvANI~~~vL~~l~~~~~ 246 (295)
T PF06325_consen 176 AIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-D-------LVEGKFDLVVANILADVLLELAPDIA 246 (295)
T ss_dssp HHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-C-------TCCS-EEEEEEES-HHHHHHHHHHCH
T ss_pred HHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-c-------cccccCCEEEECCCHHHHHHHHHHHH
Confidence 666665 488 89999999876665552 223321111 1110 1 1114799999888764 344556
Q ss_pred HhhhcCCeEEEEccccc
Q 019012 245 LNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 245 ~~l~~~G~~v~~g~~~~ 261 (347)
+.++++|.++..|....
T Consensus 247 ~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 247 SLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHEEEEEEEEEEEEEGG
T ss_pred HhhCCCCEEEEccccHH
Confidence 67889999999987543
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.016 Score=51.78 Aligned_cols=103 Identities=17% Similarity=0.281 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----Ce----eeecCCHHH---HHHHHHHHC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----DE----AFNYNDETD---LVAALKRCF 224 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~~----vi~~~~~~~---~~~~i~~~~ 224 (347)
-++.+++|+|+++++|..++.-+-..|++|+.++++.++.+.+.+++.. .. .+|-...++ +.+.+++.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~- 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK- 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-
Confidence 4567999999999999999999999999999999998776666544432 12 234443322 33333321
Q ss_pred CCCccEEEeCCCh---------h---------------hHHHHHHhhhcC--CeEEEEccc
Q 019012 225 PQGIDIYFDNVGG---------E---------------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 225 ~g~~d~vid~~g~---------~---------------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
.+..|+.++++|- + ....++..|+.. +|+|.+...
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~ 172 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI 172 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence 1268999987772 1 113445556554 899988764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0099 Score=51.72 Aligned_cols=76 Identities=21% Similarity=0.272 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
+++++||+||+|++|...++.+...|++|++++++.++. .. -.+. ...|..+.++....+.+.. .+.+|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999999999888999999999876531 11 1111 2235554423333222221 136899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 887
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.017 Score=49.78 Aligned_cols=80 Identities=15% Similarity=0.203 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-e--eeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-E--AFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++.++||+||+|++|...+..+...|++|+.++++.++...+.+. .+.. . ..|..+.+.+.+.++++.. +.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999988999999999888765554322 2221 1 2344443233333333221 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999887
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.084 Score=43.90 Aligned_cols=103 Identities=13% Similarity=0.182 Sum_probs=64.5
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHH
Q 019012 150 HEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRC 223 (347)
Q Consensus 150 ~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~ 223 (347)
.....+.++++||=.| .+.|..++.+++.. +.+|++++.+++..+.+++ +++... ++.. +..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~ 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQL 106 (196)
T ss_pred HHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhC
Confidence 3556778889988887 45566677777665 5699999999987777663 345432 2322 222223222
Q ss_pred CCCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 224 FPQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 224 ~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
....-+++++.... ..++.+.+.|+++|+++....
T Consensus 107 ~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 107 APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 22122344554322 467888999999999988753
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.02 Score=49.38 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC--ee--eecC--CHHHHHHHHHHHCC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD--EA--FNYN--DETDLVAALKRCFP 225 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~v--i~~~--~~~~~~~~i~~~~~ 225 (347)
..++.++||+|++|++|...++.+...|++|++++++.++.+.+.++ .+.. .+ .|.. +.+++.+.+..+..
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 45788999999999999999888888899999999987765444322 2321 11 2322 21133333332221
Q ss_pred --CCccEEEeCCC
Q 019012 226 --QGIDIYFDNVG 236 (347)
Q Consensus 226 --g~~d~vid~~g 236 (347)
+.+|++|.+.+
T Consensus 89 ~~~~id~vi~~Ag 101 (247)
T PRK08945 89 QFGRLDGVLHNAG 101 (247)
T ss_pred HhCCCCEEEECCc
Confidence 36899998876
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.047 Score=47.14 Aligned_cols=75 Identities=20% Similarity=0.304 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|...+..+...|++|++++++. .. ..+.. ...|..+.+.+.+.+.+... +.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999998888999999999875 22 22221 12344443233333333221 368999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.02 Score=50.31 Aligned_cols=80 Identities=25% Similarity=0.379 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-------HH----HHHHHcCCC---eeeecCCHHHHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-------VD----LLKNKLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-------~~----~~~~~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
.+.++||+||+|++|...+..+...|++|++++++.+. .+ .++ ..+.. ...|..+.+.+.+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence 46799999999999999999888889999999986532 11 122 23332 12455554233333333
Q ss_pred HCC--CCccEEEeCCCh
Q 019012 223 CFP--QGIDIYFDNVGG 237 (347)
Q Consensus 223 ~~~--g~~d~vid~~g~ 237 (347)
... +.+|++|.+.|.
T Consensus 84 ~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHhCCCCEEEECCCC
Confidence 211 369999998873
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.019 Score=50.37 Aligned_cols=78 Identities=19% Similarity=0.202 Sum_probs=51.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-e--eeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-E--AFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
++||+||+|++|...+..+...|++|++++++.++.+.+.+. .+.. . ..|..+.+++...+.+.. .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999988888899999999988765543312 2322 1 234444323333332221 1369999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
|.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999873
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0095 Score=49.99 Aligned_cols=101 Identities=20% Similarity=0.182 Sum_probs=64.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
+...+++|++||-.| ++.|+.++-+++..|. +|+.+++.+.-.+.+++ +++...+.-... +...-+.+ .
T Consensus 66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g--dg~~g~~~--~ 139 (209)
T PF01135_consen 66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG--DGSEGWPE--E 139 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---GGGTTGG--G
T ss_pred HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc--chhhcccc--C
Confidence 567799999999999 6778888889988875 79999988875555442 345543211111 11111111 1
Q ss_pred CCccEEEeCCChh-hHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g 257 (347)
+.||.++-+.+-+ .-...++.|+++|++|..-
T Consensus 140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi 172 (209)
T PF01135_consen 140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI 172 (209)
T ss_dssp -SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence 2699999877754 4567888999999999843
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.063 Score=41.10 Aligned_cols=95 Identities=19% Similarity=0.281 Sum_probs=59.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCC--CEEEEEECCh--HhH-HHHHHHcCCCeeeecCCH--HHHHHH--------------
Q 019012 161 VFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSS--QKV-DLLKNKLGFDEAFNYNDE--TDLVAA-------------- 219 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~--~~~-~~~~~~~g~~~vi~~~~~--~~~~~~-------------- 219 (347)
|.|+|++|++|..++++.+.+. ++|++.+-.. +++ +.++ +|....++-.++. ..+.+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 5799999999999999999997 5877655433 233 3344 7887766554432 011111
Q ss_pred --HHHHCC-CCccEEEeCCCh-hhHHHHHHhhhcCCeEEEE
Q 019012 220 --LKRCFP-QGIDIYFDNVGG-EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 220 --i~~~~~-g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 256 (347)
+.+... ..+|+++.++.+ ..+.-.+.+++.+=++...
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 222222 368999998865 6788888888877666554
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.041 Score=46.41 Aligned_cols=98 Identities=16% Similarity=0.189 Sum_probs=66.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHH---cCCCe--eeecCCHHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNK---LGFDE--AFNYNDETDLVAALKRC 223 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~--vi~~~~~~~~~~~i~~~ 223 (347)
....++++++||-.| .+.|..+..+++..+ .+|+.++.+++-.+.+++. .|... ++..+.. . ...
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~-~---~~~-- 141 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT-L---GYE-- 141 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc-c---CCC--
Confidence 456789999999999 567888888888875 5999999998877766633 34432 2222211 0 010
Q ss_pred CCCCccEEEeCCC-hhhHHHHHHhhhcCCeEEEE
Q 019012 224 FPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 224 ~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~ 256 (347)
..+.||.++-... .......++.|+++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 1137999875444 34557788899999998875
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.022 Score=52.88 Aligned_cols=75 Identities=28% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC--CC-eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--FD-EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g--~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
++++++|+||+|++|.+.+..+...|++|+++++++++.+...+..+ .. ...|..+.++ +.+.. +++|++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~----v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAA----LAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHH----HHHHh-CCCCEEEE
Confidence 47899999999999999999888889999999987765433221111 11 1235444312 23222 35999998
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 252 nAG 254 (406)
T PRK07424 252 NHG 254 (406)
T ss_pred CCC
Confidence 876
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.017 Score=49.96 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=53.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+.++||+||+|.+|...+..+...|++|++++++.++.+.+.+.+ +.. ...|..+.+++...+.+.. .++.|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999999999999999888888999999999887666554222 221 1235555423333333321 13589
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.+
T Consensus 81 ~vi~~a~ 87 (255)
T TIGR01963 81 ILVNNAG 87 (255)
T ss_pred EEEECCC
Confidence 9998776
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0076 Score=52.45 Aligned_cols=105 Identities=18% Similarity=0.223 Sum_probs=75.3
Q ss_pred hHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC-e--e--eecCCHHH
Q 019012 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD-E--A--FNYNDETD 215 (347)
Q Consensus 144 ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~--v--i~~~~~~~ 215 (347)
.+...+.+..++++|+++|=+| .+-|.+++-.|+..|++|+.++.|+++.+.+++ +.|.. . + -|+++
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd--- 133 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD--- 133 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc---
Confidence 4555566778999999999999 457888999999999999999999998888774 24543 1 1 12222
Q ss_pred HHHHHHHHCCCCccEEE-----eCCCh----hhHHHHHHhhhcCCeEEEEccccc
Q 019012 216 LVAALKRCFPQGIDIYF-----DNVGG----EMLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+. +.||-++ +..|. +.+..+.+.|+++|+++.-.....
T Consensus 134 -------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 134 -------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred -------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 11 1366664 34453 367888999999999988665443
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.035 Score=45.77 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCCCCccE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
+.++.+||-.|+ +.|..++.+++.. +++|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.||+
T Consensus 43 l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCccE
Confidence 456899999984 4566677777654 5699999999887766652 345433 222221 2222 111 237999
Q ss_pred EEeCCCh---hhHHHHHHhhhcCCeEEEEc
Q 019012 231 YFDNVGG---EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 231 vid~~g~---~~~~~~~~~l~~~G~~v~~g 257 (347)
|+-.... ..++.+.+.|+++|+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 9965432 46788899999999999874
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.017 Score=49.87 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHH---HcCCC-e--eeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKN---KLGFD-E--AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++.++||+||+|++|+..+..+...|++|++. .++.++.+.+.+ ..+.. . ..|..+++++...+.+.. .+.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999988764 555554433321 23332 1 234444423433333332 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (250)
T PRK08063 83 LDVFVNNAA 91 (250)
T ss_pred CCEEEECCC
Confidence 899999887
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.15 Score=44.46 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCC------eeeecCCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFD------EAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~------~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.++++||++|+ +.|..+..+++.. +.+|++++.+++-.+.+++.++.. +++.. +..+.+.+. .+.+
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~----Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA----DGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC----CHHHHHHhC-CCCC
Confidence 45678999994 4588888888877 459999999999888888555531 22222 334444432 3479
Q ss_pred cEEE-eCCC----------hhhHHHHHHhhhcCCeEEEE
Q 019012 229 DIYF-DNVG----------GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 229 d~vi-d~~g----------~~~~~~~~~~l~~~G~~v~~ 256 (347)
|+++ |+.. .+.++.+.+.|+++|.++.-
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 9987 3321 14678889999999999873
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.032 Score=49.08 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe---eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE---AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
...++||+||+|++|...++.+...|++|++++++.++.+.+.+ ..+... ..|..+.+++...+.+.. .+.+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999999888899999999987765543331 223321 135554423333333321 1368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999998873
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.041 Score=44.47 Aligned_cols=94 Identities=16% Similarity=0.087 Sum_probs=61.1
Q ss_pred cCChhhhHHHHHHhhcCCCCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHH
Q 019012 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGA-VGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDL 216 (347)
Q Consensus 138 l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~-~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 216 (347)
.|+....+...+.....--.+.++||.|+ |. +|..++.++...|++|+++.+..+ ++
T Consensus 24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l 81 (168)
T cd01080 24 IPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------NL 81 (168)
T ss_pred cCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------hH
Confidence 34444444444433333467899999997 65 699999999999999888886532 22
Q ss_pred HHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 217 VAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 217 ~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.+.++ .+|+||.+++...+ -..+.++++-.++.++.+
T Consensus 82 ~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~p 118 (168)
T cd01080 82 KEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN 118 (168)
T ss_pred HHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence 22333 28999999987542 222346666666667654
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.031 Score=49.91 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC------CeeeecCCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF------DEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.+.++||++|+ +-|..+..++++-+. +|++++.+++-.+.+++.+.. +.-+..... +....+++...+.|
T Consensus 90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence 45789999995 346677788887665 899999988777777632321 100111111 44444554334479
Q ss_pred cEEEeCCCh-----------hhHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYFDNVGG-----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g 257 (347)
|++|--... +.++.+.++|+++|.++.-.
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 999742221 35778899999999997643
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.03 Score=49.50 Aligned_cols=97 Identities=11% Similarity=0.126 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcC-----C--CeeeecCCHHHHHHHHHHHCCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG-----F--DEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g-----~--~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
.++++||++| ++.|..+..+++..+. +|++++.+++-.+.+++.+. . +.-+..... +....+++ ..+.
T Consensus 75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 4567999999 4557778888887665 89999999988787773332 1 100111111 33444444 3447
Q ss_pred ccEEEeCCC-----------hhhHHHHHHhhhcCCeEEEE
Q 019012 228 IDIYFDNVG-----------GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 228 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~ 256 (347)
+|++|--.. .+.++.+.+.|+++|.++.-
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999985331 12457788899999999874
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.017 Score=57.63 Aligned_cols=80 Identities=21% Similarity=0.331 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC----eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD----EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+.. .+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999988889999999999887655543232 321 1245554424444343322 24
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|++|.+.|
T Consensus 493 ~iDilV~nAG 502 (676)
T TIGR02632 493 GVDIVVNNAG 502 (676)
T ss_pred CCcEEEECCC
Confidence 7999999988
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.025 Score=48.68 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH---Hc-C--CC-eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN---KL-G--FD-EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~---~~-g--~~-~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.+.++||+||+|.+|..++..+...|++|++++++. ++.+.+.+ +. + +. ...|..+.+++...+.+.. .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999988888899999999753 33333221 11 1 11 2235555423333333221 13
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999987
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.035 Score=48.66 Aligned_cols=84 Identities=20% Similarity=0.182 Sum_probs=61.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-ee-------ecCCHHHHHHHHHHHCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AF-------NYNDETDLVAALKRCFP 225 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi-------~~~~~~~~~~~i~~~~~ 225 (347)
+.++...++|.|++.++|++.+.-++..|++|+++.++.+++..+..+++... +. |-.+.+.....++++-+
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 34555789999999999999999999999999999999999988876666521 11 11111133444554422
Q ss_pred --CCccEEEeCCCh
Q 019012 226 --QGIDIYFDNVGG 237 (347)
Q Consensus 226 --g~~d~vid~~g~ 237 (347)
+.+|.+|.|.|.
T Consensus 109 ~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGV 122 (331)
T ss_pred ccCCcceEEEecCc
Confidence 368999999984
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.022 Score=48.76 Aligned_cols=78 Identities=21% Similarity=0.313 Sum_probs=49.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+++||+||+|++|...+..+...|++|+++.+ ++++.+...++. +.. ...|..+...+...+.++. .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899999999999999999889999998887 444333222122 211 1235554323333333221 13689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 81 ~vi~~ag 87 (242)
T TIGR01829 81 VLVNNAG 87 (242)
T ss_pred EEEECCC
Confidence 9999987
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.041 Score=47.48 Aligned_cols=80 Identities=21% Similarity=0.245 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHHcCCC---eeeecCCHHHHHHHHH---HHCCCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNKLGFD---EAFNYNDETDLVAALK---RCFPQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~---~~~~g~~d 229 (347)
.+.++||+||+|++|..++..+...|++|+.+.+ +.++.+.+.++++.. ...|..+.+++...+. +..++.+|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3578999999999999999988888999987654 444444444244421 1235444323333333 33322489
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9998875
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.088 Score=45.24 Aligned_cols=168 Identities=18% Similarity=0.156 Sum_probs=93.5
Q ss_pred cCC--chHHHHHHHHHHHCCCEEEEEECChHh----HHHHHHHcCCC-eeeecCCHHH---HHHHHHHHCCCCccEEEeC
Q 019012 165 AAS--GAVGQLVGQLAKLHGCYVVGSAGSSQK----VDLLKNKLGFD-EAFNYNDETD---LVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 165 Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~~----~~~~~~~~g~~-~vi~~~~~~~---~~~~i~~~~~g~~d~vid~ 234 (347)
|++ +++|.+.++.+...|++|++++++.++ .+.+.++.+.. ..+|..++++ +.+.+.+..+|.+|+++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 455 899999999999999999999999987 34444355643 2245544423 3344444444679999986
Q ss_pred CChh------------------------------hHHHHHHhhhcCCeEEEEcccccccCCCCCCc-------------c
Q 019012 235 VGGE------------------------------MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGI-------------H 271 (347)
Q Consensus 235 ~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-------------~ 271 (347)
.+.. ..+.+.+.++++|.++.++............. .
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~ 160 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS 160 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence 6421 01335567888999998876543211111000 0
Q ss_pred chHHHhh-cceEeeccccccccchhHHH---HHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCc
Q 019012 272 NLFTLVT-KRITMKGFLQSDYLHLYPRF---LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGK 335 (347)
Q Consensus 272 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~ 335 (347)
....+-. +++++.....+.......+. .+++.+.+.+ ..+.......+|+.++...|.+..
T Consensus 161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~s~~ 225 (241)
T PF13561_consen 161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLASDA 225 (241)
T ss_dssp HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred HHHHhccccCeeeeeecccceeccchhccccccchhhhhhh---hhccCCCcCHHHHHHHHHHHhCcc
Confidence 1233444 56666555544332111111 1233333321 111122236778888888887755
|
... |
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.059 Score=45.45 Aligned_cols=98 Identities=19% Similarity=0.180 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee--------------eecCCHHHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA--------------FNYNDETDLVAALK 221 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~i~ 221 (347)
.++.+||+.| -|.|.-++.+|. .|.+|++++.|+...+.+.++.+.... ++.... ++.+ +.
T Consensus 33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~-~~ 107 (213)
T TIGR03840 33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFA-LT 107 (213)
T ss_pred CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCC-CC
Confidence 5678999999 457888888885 699999999999988876434443210 000000 1100 00
Q ss_pred HHCCCCccEEEeCCC---------hhhHHHHHHhhhcCCeEEEEcc
Q 019012 222 RCFPQGIDIYFDNVG---------GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 222 ~~~~g~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
....+.||.++|+.. ...++...++|+++|+++..+.
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 000135899999754 1257788999999998776654
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.021 Score=49.31 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=50.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC----eeeecCCHHHHH---HHHHHHCCCCcc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD----EAFNYNDETDLV---AALKRCFPQGID 229 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~---~~i~~~~~g~~d 229 (347)
++||+||++++|.+.+..+. .|++|+++++++++.+.+.+++ |.. ..+|-.+.++.. +.+.+.. +.+|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999998777665 4999999999888776554232 321 123544442333 3333322 4689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 80 ~lv~nag 86 (246)
T PRK05599 80 LAVVAFG 86 (246)
T ss_pred EEEEecC
Confidence 9998877
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0096 Score=52.02 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
.+.++||+||+|++|.+.++.+...|++|+.+++++++.+ ...+. ...|..+++++...+.+.. .+.+|+++.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4679999999999999999999999999999988765432 11111 2245555423433333322 136899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 84 ~Ag 86 (266)
T PRK06171 84 NAG 86 (266)
T ss_pred CCc
Confidence 887
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.023 Score=48.83 Aligned_cols=80 Identities=25% Similarity=0.353 Sum_probs=51.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+.++||+||+|++|...+..+...|++|+++ .++.++.+.+.+.+ +.. ...|..+.+++...+.+... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999888887889999988 87776654443222 211 12355544233333332211 369
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998873
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.021 Score=49.76 Aligned_cols=104 Identities=15% Similarity=0.129 Sum_probs=64.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECCh------HhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCC-
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSS------QKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFP- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~------~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~- 225 (347)
.++++||+||+ +++|.+.+..+...|++|+++.++. +..+.+.++.+.. ..+|-.+.++....+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 47899999985 7999999988888999998876432 2233333122211 12455554333333333221
Q ss_pred -CCccEEEeCCChh-------h-----------------------HHHHHHhhhcCCeEEEEcccc
Q 019012 226 -QGIDIYFDNVGGE-------M-----------------------LDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 226 -g~~d~vid~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~ 260 (347)
+.+|+++++.|.. . .+..+..|+++|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 4699999988721 0 133555677789998887643
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.028 Score=48.29 Aligned_cols=77 Identities=16% Similarity=0.184 Sum_probs=51.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC-e--eeecCCHHHHHHHHHHHCCCCccEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD-E--AFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
.+++|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.++..+.+.+.. ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 57999999999999999988888999999999887655443122 111 1 234444323333333322 247999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 81 v~~ag 85 (243)
T PRK07102 81 LIAVG 85 (243)
T ss_pred EECCc
Confidence 98776
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.027 Score=49.69 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
..+.++||+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++....+.... +..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~--~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL--ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc--cchhcc-----ccCCEEEEC
Confidence 45678999996 9999999999999995 99999999888776663554211011100 111111 258999999
Q ss_pred CChhhH------HHHHHhhhcCCeEEEEcc
Q 019012 235 VGGEML------DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~~~~------~~~~~~l~~~G~~v~~g~ 258 (347)
+..... ......++++..++.+-.
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 874321 122356677766666643
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.024 Score=49.01 Aligned_cols=79 Identities=14% Similarity=0.240 Sum_probs=52.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCccE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
.++||+|++|++|...++.+...|++|+.+++++++.+.+.++ .+.. ...|-.+++++.+.+.+... +.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3789999999999999999888999999999887655443312 2321 12355544233333333221 36899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998873
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.27 Score=40.15 Aligned_cols=91 Identities=18% Similarity=0.159 Sum_probs=57.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-C--e--eeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-D--E--AFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~--~--vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
+++|+||+ ++|...++.+...|++|++++++.++.+.+...++. . . ..|.++.+++...++.... +.+|++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 455556666666799999999988776665523421 1 1 1366665355555544322 3689999
Q ss_pred eCCChhhHHHHHHhhhcCC
Q 019012 233 DNVGGEMLDAALLNMRDHG 251 (347)
Q Consensus 233 d~~g~~~~~~~~~~l~~~G 251 (347)
+.+-.+.-+......+..|
T Consensus 81 ~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 81 AWIHSSAKDALSVVCRELD 99 (177)
T ss_pred EeccccchhhHHHHHHHHc
Confidence 9887654444555555444
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.018 Score=50.89 Aligned_cols=75 Identities=11% Similarity=-0.042 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
++.++||+|+ |+.+.+++..+..+|+ +|+++.++.+|.+.+.++++.. .+..... .+.+.+.. ..+|+||+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----DSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----hhhhhhcc-cCCCEEEEC
Confidence 5789999996 9999999999999998 8999999988877766455431 1111110 01111111 258999999
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 874
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.02 Score=56.00 Aligned_cols=81 Identities=21% Similarity=0.161 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|...++.+...|++|++++++.++.+.+.+. .|.. ..+|..+.+...+.+.+.. .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999988888999999999988776554322 2331 1245555423333333332 2368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++++.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999873
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.04 Score=44.86 Aligned_cols=80 Identities=18% Similarity=0.208 Sum_probs=54.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--Ce---eeecCCHHHHHHHHHHHCC--CCccE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--DE---AFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~~---vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
....+|+||++++|++..|.+-..|++|.+.+.+.+..+.....++. ++ -.|..+..+....+++... |..++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 45679999999999999999999999999999877654444326654 22 2454443133322333322 37899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
+++|.|-
T Consensus 94 lVncAGI 100 (256)
T KOG1200|consen 94 LVNCAGI 100 (256)
T ss_pred EEEcCcc
Confidence 9999993
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.033 Score=46.70 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=65.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
+...++++++||=.| .+.|..++.+++..+ .+|+.++.+++-.+.+++ ..+.. .++..+ ..+.+..
T Consensus 66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d----~~~~~~~ 139 (205)
T PRK13944 66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD----GKRGLEK 139 (205)
T ss_pred HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC----cccCCcc
Confidence 556778999999999 466888888888774 599999999886666653 34432 222222 1111111
Q ss_pred HCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEE
Q 019012 223 CFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 223 ~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 256 (347)
.+.||.++-+... ...+...+.|+++|+++..
T Consensus 140 --~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 140 --HAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred --CCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1379999866554 3456778899999999764
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.027 Score=49.40 Aligned_cols=91 Identities=13% Similarity=0.057 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCe----eeecCCHHHHHHHHHHHCCC-Ccc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDE----AFNYNDETDLVAALKRCFPQ-GID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~~g-~~d 229 (347)
.+++++||+|| |+.+.+++.-+...|+ +++++.|+.+|.+.+.+.++... .....+ +... .+|
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~----------~~~~~~~d 192 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD----------LEGLEEAD 192 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc----------cccccccC
Confidence 35899999996 9999999999999997 89999999998888774555321 111111 1111 389
Q ss_pred EEEeCCChhh-------HHHHHHhhhcCCeEEEEcc
Q 019012 230 IYFDNVGGEM-------LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 230 ~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~ 258 (347)
++++|+.-.. .-. ..++++.-.+..+-.
T Consensus 193 liINaTp~Gm~~~~~~~~~~-~~~l~~~~~v~D~vY 227 (283)
T COG0169 193 LLINATPVGMAGPEGDSPVP-AELLPKGAIVYDVVY 227 (283)
T ss_pred EEEECCCCCCCCCCCCCCCc-HHhcCcCCEEEEecc
Confidence 9999987311 111 455666666655543
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.13 Score=47.48 Aligned_cols=94 Identities=20% Similarity=0.259 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.+.++||+|| |-+|..++..+...|. +|++.-+..+|...+.+++|+ .++..+ +....+. .+|+||.+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-~~~~l~---el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-EAVALE---ELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-eeecHH---HHHHhhh-----hCCEEEEe
Confidence 46889999997 9999999999999997 888888888887776668995 344332 2333333 39999999
Q ss_pred CChh----hHHHHHHhhhcC-C-eEEEEccc
Q 019012 235 VGGE----MLDAALLNMRDH-G-RIAVCGMV 259 (347)
Q Consensus 235 ~g~~----~~~~~~~~l~~~-G-~~v~~g~~ 259 (347)
++.+ ......+.++.. . -++.++.|
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 9975 223444455443 3 34445543
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.092 Score=46.11 Aligned_cols=93 Identities=14% Similarity=0.184 Sum_probs=60.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC---CeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
...+.+++|+|+ |++|.+++..+...|++|+++.++.++.+.+.++++. ..... +.+ .....+|++
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~------~~~----~~~~~~Div 182 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS------MDE----LPLHRVDLI 182 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec------hhh----hcccCccEE
Confidence 345789999997 9999999988888899999999988776655434432 11211 111 111258999
Q ss_pred EeCCChhh---HH---HHHHhhhcCCeEEEEcc
Q 019012 232 FDNVGGEM---LD---AALLNMRDHGRIAVCGM 258 (347)
Q Consensus 232 id~~g~~~---~~---~~~~~l~~~G~~v~~g~ 258 (347)
|+|++... .. .....++++..++.+..
T Consensus 183 Inatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 183 INATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 99998531 11 12345677777776654
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.049 Score=50.57 Aligned_cols=90 Identities=22% Similarity=0.240 Sum_probs=58.2
Q ss_pred EEEEcCCchHHHHHHHHHHHCC-C-EEEEEECChHhHHHHHHHc-CC---CeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 161 VFVSAASGAVGQLVGQLAKLHG-C-YVVGSAGSSQKVDLLKNKL-GF---DEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G-~-~V~~~~~~~~~~~~~~~~~-g~---~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
|+|+|+ |.+|..+++++...+ . +|++.+++.++.+.+.+++ +. ...+|..+.++ +.++.. +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence 789999 999999999988775 4 8999999999988776332 22 23456555422 333332 36999999
Q ss_pred CChh-hHHHHHHhhhcCCeEEEE
Q 019012 235 VGGE-MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 235 ~g~~-~~~~~~~~l~~~G~~v~~ 256 (347)
+|.. ...-+..|+..+-+++..
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CccchhHHHHHHHHHhCCCeecc
Confidence 9975 444455566778888884
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.03 Score=48.74 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
++.++||+||+|++|...++.+...|++|+++.++.. ..+.+.+ ..+.. ...|..+.++..+.+.+... +.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999888877442 2222221 22321 12355554233333333221 36
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|+++.+.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999998873
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.036 Score=48.56 Aligned_cols=69 Identities=14% Similarity=0.103 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+...+++++|+|+ |+.+++++..+..+|+ +|+++.++.++.+.+.+.++.. +...+. ...+|+++
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILV 183 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEE
Confidence 3445679999996 9999999999999998 7999999998877766355421 111111 12589999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9986
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.032 Score=49.33 Aligned_cols=93 Identities=22% Similarity=0.070 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC----CeeeecCCHHHHHHHHHHHCCCCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF----DEAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
..+.+|+|+|+ |+.|.+++..+...|+ +|+++.++.+|.+.+.++++. ..+.... ++.+.+ ..+|+
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDi 195 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADG 195 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCE
Confidence 35689999996 9999999999999999 899999998887766534431 1222211 222122 24899
Q ss_pred EEeCCChh-----hHHHHHHhhhcCCeEEEEc
Q 019012 231 YFDNVGGE-----MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 231 vid~~g~~-----~~~~~~~~l~~~G~~v~~g 257 (347)
||+|+... ........++++..++.+-
T Consensus 196 VInaTp~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 196 LVHATPTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred EEECCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 99996421 1111124466665555544
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.029 Score=50.31 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=51.5
Q ss_pred EEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC--C----eeeecCCHHHHHHHHHHHC--CCCccEEE
Q 019012 162 FVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF--D----EAFNYNDETDLVAALKRCF--PQGIDIYF 232 (347)
Q Consensus 162 LI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~--~----~vi~~~~~~~~~~~i~~~~--~g~~d~vi 232 (347)
||+||++++|.++++.+...| ++|++++++.++.+.+.++++. . ..+|..+.+++...+.++. .+.+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999888888889 8999999988776655434432 1 1245555423433333332 23689999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
++.|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9887
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.054 Score=43.71 Aligned_cols=92 Identities=20% Similarity=0.289 Sum_probs=62.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--CeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--DEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
.|.|+||+|-+|...++=|+..|..|++++++++|....+ ..-+ ..++|.. .+.+.+ .++|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence 5789999999999999999999999999999999865433 1111 1133322 111222 269999998874
Q ss_pred h----------hHHHHHHhhhcC--CeEEEEcccc
Q 019012 238 E----------MLDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 238 ~----------~~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
. ..+..+..|+.- -|+..+|...
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 2 233455666663 4888888754
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.044 Score=47.58 Aligned_cols=80 Identities=19% Similarity=0.235 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.+.++||+||+|++|...++.+...|++|+++++. .++.+.+.+. .+.. ...|..+.+++...+.+.. .+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999998888899998877654 3333333212 2331 1235554423333333321 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 88 iD~vi~~ag 96 (258)
T PRK09134 88 ITLLVNNAS 96 (258)
T ss_pred CCEEEECCc
Confidence 899999987
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.064 Score=40.56 Aligned_cols=100 Identities=21% Similarity=0.279 Sum_probs=66.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~ 224 (347)
....+.+++++|-+|+ | .|..+..+++..+ .+|++++.++...+.+++ .++... ++..+ ....+.. .
T Consensus 13 ~~~~~~~~~~vldlG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~----~~~~~~~-~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA-G-SGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD----APEALED-S 85 (124)
T ss_pred HHcCCCCCCEEEEeCC-C-CCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc----ccccChh-h
Confidence 3345677889999994 4 4999999998875 599999999987777652 234332 22221 1111111 1
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.+|+++-..+. ..++.+.+.|+++|+++...
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 2369999876542 36788999999999998753
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.035 Score=48.35 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=96.9
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCH----------HHHHHHHH
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDE----------TDLVAALK 221 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~----------~~~~~~i~ 221 (347)
+.-.++..+|+.|+ |..|+.++..++..|+-|...+-...+.+..+ ++|+... ++ .++ ++|..+=.
T Consensus 159 agtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~-~ee~~gGYAk~ms~~~~~~q~ 235 (356)
T COG3288 159 AGTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVE-DEESAGGYAKEMSEEFIAKQA 235 (356)
T ss_pred cccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hccccccccc-ccccCCCccccCCHHHHHHHH
Confidence 44467788999996 99999999999999999999988888878877 8887422 11 110 12322212
Q ss_pred HHCC---CCccEEEeCCC--h-h----hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc--
Q 019012 222 RCFP---QGIDIYFDNVG--G-E----MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS-- 289 (347)
Q Consensus 222 ~~~~---g~~d~vid~~g--~-~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (347)
++.. .++|+||-+.= + + ........|++|..+|.+....+.+.... ........++.++.|...-
T Consensus 236 ~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t---~pg~~v~~~gV~iig~~nlp~ 312 (356)
T COG3288 236 ELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELT---EPGKVVTKNGVKIIGYTNLPG 312 (356)
T ss_pred HHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccc---cCCeEEEeCCeEEEeecCcch
Confidence 2211 26999998763 2 2 34678889999999999887666543322 2224455667788776531
Q ss_pred cc----cchhHHHHHHHHHHHHC
Q 019012 290 DY----LHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 290 ~~----~~~~~~~~~~~~~~l~~ 308 (347)
+. ...|...+-.+++++-+
T Consensus 313 r~a~~aS~LYa~Nl~~~l~ll~~ 335 (356)
T COG3288 313 RLAAQASQLYATNLVNLLKLLCK 335 (356)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhc
Confidence 11 22344555666665543
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.065 Score=47.30 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=38.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL 202 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~ 202 (347)
..++++||+|+ |+.+.+++..+..+|+ +++++.++.+|.+.+.+++
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 34789999996 9999999888888998 8999999988877765344
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.049 Score=47.12 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHH---C--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRC---F-- 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~-- 224 (347)
.+.+++|+||+|++|...++.+...|++|++. .++.++.+.+.+++ +.. ...|-++.+++...+++. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 35789999999999999999888889988764 56665543332122 221 123555543444433332 1
Q ss_pred --C-CCccEEEeCCCh
Q 019012 225 --P-QGIDIYFDNVGG 237 (347)
Q Consensus 225 --~-g~~d~vid~~g~ 237 (347)
+ +++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1 368999998873
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.047 Score=48.45 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh---HhHHHHHHHcCC---C---eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS---QKVDLLKNKLGF---D---EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~---~~~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~~~ 225 (347)
..++++||+|+ |++|.+++..+...|+ +|+++.++. ++.+.+.+++.. . ...+..+. +.+.+..
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~----~~~~~~~- 197 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDT----EKLKAEI- 197 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhh----hHHHhhh-
Confidence 35789999997 8999999888888999 599999885 444443324421 1 11233221 1222211
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
..+|++++|+.
T Consensus 198 ~~~DilINaTp 208 (289)
T PRK12548 198 ASSDILVNATL 208 (289)
T ss_pred ccCCEEEEeCC
Confidence 14799999885
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.048 Score=47.98 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=89.6
Q ss_pred CCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 019012 94 PNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQL 173 (347)
Q Consensus 94 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ 173 (347)
.-+++|++.+...+|.+|..-. +...+++ ..+ +.+-...=+.+.+ ...+|.+ -.++|.+||=+| .+.|.+
T Consensus 107 ~P~rig~~f~I~Psw~~~~~~~-~~~~i~l-DPG---lAFGTG~HpTT~l-cL~~Le~--~~~~g~~vlDvG--cGSGIL 176 (300)
T COG2264 107 HPVRIGERFVIVPSWREYPEPS-DELNIEL-DPG---LAFGTGTHPTTSL-CLEALEK--LLKKGKTVLDVG--CGSGIL 176 (300)
T ss_pred CcEEeeeeEEECCCCccCCCCC-CceEEEE-ccc---cccCCCCChhHHH-HHHHHHH--hhcCCCEEEEec--CChhHH
Confidence 3478899888888888875443 3336777 334 3432222121111 1223322 246999999999 456777
Q ss_pred HHHHHHHCCC-EEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh----hHHHHHH
Q 019012 174 VGQLAKLHGC-YVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE----MLDAALL 245 (347)
Q Consensus 174 ai~la~~~G~-~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~----~~~~~~~ 245 (347)
+|..++. |+ +|++++.++...+.+++ ..++...+..... +. ......+.||+|+-++=.+ ......+
T Consensus 177 aIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~-~~---~~~~~~~~~DvIVANILA~vl~~La~~~~~ 251 (300)
T COG2264 177 AIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGF-LL---LEVPENGPFDVIVANILAEVLVELAPDIKR 251 (300)
T ss_pred HHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccc-cc---hhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence 7665554 77 79999999876666552 1233210000000 11 1111224799999877432 4567788
Q ss_pred hhhcCCeEEEEcccc
Q 019012 246 NMRDHGRIAVCGMVS 260 (347)
Q Consensus 246 ~l~~~G~~v~~g~~~ 260 (347)
.++++|+++..|...
T Consensus 252 ~lkpgg~lIlSGIl~ 266 (300)
T COG2264 252 LLKPGGRLILSGILE 266 (300)
T ss_pred HcCCCceEEEEeehH
Confidence 899999999998643
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.045 Score=46.80 Aligned_cols=88 Identities=24% Similarity=0.337 Sum_probs=59.0
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChH--hHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ--KVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~--~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
|+|+||+|.+|...++.+...+.+|.+.+++.. ..+.++ ..|+..+ .|+.+.+.+.+.+ . ++|.||-+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~~~l~~al----~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDPESLVAAL----K-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-HHHHHHHH----T-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCHHHHHHHH----c-CCceEEeecCc
Confidence 799999999999999999998899999999864 355566 7788532 3444332232222 2 59999988882
Q ss_pred ---h---hHHHHHHhhhcCC--eEE
Q 019012 238 ---E---MLDAALLNMRDHG--RIA 254 (347)
Q Consensus 238 ---~---~~~~~~~~l~~~G--~~v 254 (347)
. ......++..+-| +++
T Consensus 75 ~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 75 SHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred chhhhhhhhhhHHHhhhccccceEE
Confidence 2 3345555555544 444
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.033 Score=50.89 Aligned_cols=77 Identities=19% Similarity=0.181 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC----CC-eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG----FD-EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
+|.+|||+||+|.+|..+++.+...|.+|++++++........+.++ .. ...|-.+.+++.+.+++ .++|+|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~v 79 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIV 79 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEE
Confidence 46799999999999999999999999999999877654332211222 11 12344443233333332 158999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.+
T Consensus 80 ih~A~ 84 (349)
T TIGR02622 80 FHLAA 84 (349)
T ss_pred EECCc
Confidence 99887
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.096 Score=47.50 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc-CC---------CeeeecCCHHHHHHHHHHHC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL-GF---------DEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~-g~---------~~vi~~~~~~~~~~~i~~~~ 224 (347)
...++|||+| ||.|.++..+++..+. +|++++.+++-.+.++ ++ .. +.-+...-. +..+.+++ .
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~ 223 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P 223 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence 4457999999 5567777788876654 9999999999888888 42 10 000111111 34444543 3
Q ss_pred CCCccEEEeCCC------------hhhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFDNVG------------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid~~g------------~~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||++|--.. .+.++.+.+.|+++|.++.-.
T Consensus 224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 347999874321 125678889999999988764
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.037 Score=55.17 Aligned_cols=79 Identities=20% Similarity=0.294 Sum_probs=55.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+.++||+||+|++|...+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+.. .+.+|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 678999999999999999888888999999999887765544232 321 1235554423433333322 13699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 451 ~li~~Ag 457 (657)
T PRK07201 451 YLVNNAG 457 (657)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.14 Score=38.40 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=61.2
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh-
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM- 239 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~- 239 (347)
|+|.|+ |.+|+..++.++..+.+|++++.++++.+.++ +.|.. ++..+. .-.+.+++..-..++.++-+++.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~gd~--~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYGDA--TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES-T--TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccccc--hhhhHHhhcCccccCEEEEccCCHHH
Confidence 678896 99999999999997779999999999999998 77753 444332 1122344433337898888887642
Q ss_pred ---HHHHHHhhhcCCeEEEE
Q 019012 240 ---LDAALLNMRDHGRIAVC 256 (347)
Q Consensus 240 ---~~~~~~~l~~~G~~v~~ 256 (347)
.....+.+.+..+++..
T Consensus 76 n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 22334445556666554
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.031 Score=50.53 Aligned_cols=95 Identities=9% Similarity=0.059 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEEECChHhHHHHHHHc----CCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLA-KLHGC-YVVGSAGSSQKVDLLKNKL----GFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la-~~~G~-~V~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
....+++|+|+ |..|.+.+..+ ...++ +|.+..++.++.+.+.+++ +.. +..+. ++.+.++ ..|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 45678999995 99998777554 45687 8889999888776655333 432 22222 2333332 489
Q ss_pred EEEeCCChhhHHHHHHhhhcCCeEEEEccccc
Q 019012 230 IYFDNVGGEMLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 230 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+|+.|+.+...... ..+++|-++..+|....
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p 225 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFMP 225 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCCc
Confidence 99999987533334 88899989999987543
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.11 Score=41.54 Aligned_cols=87 Identities=8% Similarity=0.085 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|||.|| |.+|..-++.+...|++|++++ ++..+.+. +++.-. ++.+ .+. +..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~----~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFS----NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccC----hhcCCCceEEEECCC
Confidence 5789999997 9999988888888899999885 33334455 454211 2221 111 100126899999999
Q ss_pred hhhHHHHHHhhhcCCeEEE
Q 019012 237 GEMLDAALLNMRDHGRIAV 255 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~ 255 (347)
.+..+......++.+.++.
T Consensus 80 d~e~N~~i~~~a~~~~~vn 98 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVN 98 (157)
T ss_pred CHHHHHHHHHHHHHCCcEE
Confidence 8766666665554444444
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.047 Score=45.67 Aligned_cols=91 Identities=9% Similarity=-0.007 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.|.+|||.|| |.+|...+..+...|++|++++.... +...+. ..+.- .+..... . ...+ .++|+||-|+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i-~~~~~~~-~-~~~l-----~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKI-RWKQKEF-E-PSDI-----VDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCE-EEEecCC-C-hhhc-----CCceEEEEcC
Confidence 5789999997 99999999888889999998875432 222222 11211 1111110 0 0011 2589999999
Q ss_pred ChhhHHHHHHhhhcCCeEEEEc
Q 019012 236 GGEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 236 g~~~~~~~~~~l~~~G~~v~~g 257 (347)
+.+..+..+......+.++...
T Consensus 79 ~d~elN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 79 NDPRVNEQVKEDLPENALFNVI 100 (202)
T ss_pred CCHHHHHHHHHHHHhCCcEEEC
Confidence 9876666555555556666554
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.087 Score=43.97 Aligned_cols=48 Identities=19% Similarity=0.186 Sum_probs=41.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
-.|.+++|+|. |.+|..+++.+...|++|++++++.++.+.+.+.+|+
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCC
Confidence 46789999996 9999999999999999999999988887777645565
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.049 Score=48.39 Aligned_cols=81 Identities=17% Similarity=0.208 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
-++.++||+||+|++|...+..+...|++|++++++..+ .+.+.+ ..+.. ...|..+.+.+.+.+.+... +
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 347899999999999999998888889999998876432 222211 22322 12354444233333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 124 ~iD~lI~~Ag 133 (290)
T PRK06701 124 RLDILVNNAA 133 (290)
T ss_pred CCCEEEECCc
Confidence 6899998876
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.43 Score=41.32 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=62.6
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
....++.+||-.|+ |. |..+..+++ .|.+|++++.+++..+.+++.......+..+-. ++ .+..+.||+|+
T Consensus 38 l~~~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~~-----~~~~~~fD~V~ 108 (251)
T PRK10258 38 LPQRKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-SL-----PLATATFDLAW 108 (251)
T ss_pred cCccCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-cC-----cCCCCcEEEEE
Confidence 33456788999995 43 665555554 588999999999988888833222222222111 11 11123699998
Q ss_pred eCCCh-------hhHHHHHHhhhcCCeEEEEcc
Q 019012 233 DNVGG-------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 233 d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
....- ..+.++.+.|+++|.++....
T Consensus 109 s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 109 SNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred ECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 75431 367888999999999987654
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.042 Score=48.53 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=62.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC-CC-ccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP-QG-IDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~-g~-~d~vid~~g 236 (347)
+|||+||+|.+|..+++.+...|.+|.+.+++.++.. ..+.. ...|..+.+.+...++.... .+ +|.++-+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999999888999999999876532 22332 23566655344444432211 25 899987766
Q ss_pred h-----hhHHHHHHhhhcCC--eEEEEcc
Q 019012 237 G-----EMLDAALLNMRDHG--RIAVCGM 258 (347)
Q Consensus 237 ~-----~~~~~~~~~l~~~G--~~v~~g~ 258 (347)
. ......++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 3 13445566665554 6777764
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.054 Score=46.89 Aligned_cols=78 Identities=15% Similarity=0.187 Sum_probs=49.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+++||+||+|++|...+..+...|++|++++++.. +.+...+ ..+.. ...|..+++++.+.+.+... +.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999988888999999886542 2222211 22321 12455554233333333321 3689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 83 ~vi~~ag 89 (256)
T PRK12745 83 CLVNNAG 89 (256)
T ss_pred EEEECCc
Confidence 9999886
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.046 Score=47.81 Aligned_cols=106 Identities=11% Similarity=0.174 Sum_probs=68.4
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCC
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
.+....++.++.+||=+|+ | .|..+..+++..+++|++++.++...+.+++.......+..... ++.. ..+..+.
T Consensus 43 ~~l~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~~ 117 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPENT 117 (263)
T ss_pred HHHHhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCCC
Confidence 3335577899999999984 3 46667777777789999999999888888733332111111111 1110 0011236
Q ss_pred ccEEEeCC-----C--h--hhHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFDNV-----G--G--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
||+|+..- . . ..++++.+.|+|+|+++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99998621 1 1 267888899999999998765
|
|
| >PRK00536 speE spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.019 Score=49.79 Aligned_cols=98 Identities=15% Similarity=0.052 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH-cCC-CeeeecCCHHHHHHHHHHHCCCCccEEE-
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK-LGF-DEAFNYNDETDLVAALKRCFPQGIDIYF- 232 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~-~g~-~~vi~~~~~~~~~~~i~~~~~g~~d~vi- 232 (347)
.+.++|||.| |+=|.++-.++|+-. +|+.++.+++=.+.++ + +.. ...++...- ++...+.+...+.||++|
T Consensus 71 ~~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k-~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIv 145 (262)
T PRK00536 71 KELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFI-SFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIIC 145 (262)
T ss_pred CCCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHH-HHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEE
Confidence 4568999999 666778889998865 9999999998777777 4 321 011111110 111123333334799986
Q ss_pred eCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 233 DNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 233 d~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|++-. +.++.+.++|+++|.++.-..
T Consensus 146 Ds~~~~~fy~~~~~~L~~~Gi~v~Qs~ 172 (262)
T PRK00536 146 LQEPDIHKIDGLKRMLKEDGVFISVAK 172 (262)
T ss_pred cCCCChHHHHHHHHhcCCCcEEEECCC
Confidence 54543 578899999999999988543
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.056 Score=45.29 Aligned_cols=92 Identities=18% Similarity=0.107 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.|.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.|--..+. .+. . ...+ .++++||-++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~~-~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RCF-D-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CCC-C-HHHh-----CCcEEEEECC
Confidence 4779999997 99999999999999999999886543 333333 333211221 111 1 1111 2599999999
Q ss_pred Chh-hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GGE-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.+ .-.......+..|..+....
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEECC
Confidence 976 44556666667788776543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.053 Score=44.43 Aligned_cols=39 Identities=23% Similarity=0.212 Sum_probs=32.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
+|.|.|+ |.+|...++++-..|.+|+..+.+++..+.++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 5789997 99999988888888999999999998776655
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.01 Score=43.74 Aligned_cols=87 Identities=18% Similarity=0.236 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|||.|+ |.+|..-++.+...|++|++++... +..+ +.-... .+ .+... . .++++|+-+++
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~-~~---~~~~~----l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI-RR---EFEED----L-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE-ES---S-GGG----C-TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH-hh---hHHHH----H-hhheEEEecCC
Confidence 4789999997 9999999999999999999999775 2222 211111 11 22111 1 26999999998
Q ss_pred hhhHH-HHHHhhhcCCeEEEEccc
Q 019012 237 GEMLD-AALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 237 ~~~~~-~~~~~l~~~G~~v~~g~~ 259 (347)
...++ ...+..+..|.++.....
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVDD 93 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT-
T ss_pred CHHHHHHHHHHHhhCCEEEEECCC
Confidence 76544 455555668999988653
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.039 Score=46.98 Aligned_cols=101 Identities=15% Similarity=0.201 Sum_probs=72.7
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
...++.+|++|+=.| .+.|.+++-||+..|- +|+.....++..+.+++. +|....+..... |. .+...
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv----~~~~~ 160 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DV----REGID 160 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-cc----ccccc
Confidence 457899999999887 5678889999998875 899999999888887643 344332222222 32 22222
Q ss_pred C-CccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 Q-GIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+ .||.+|==... ..++.+.+.|+++|.++++..
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 3 68887644443 589999999999999999854
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.16 Score=36.58 Aligned_cols=86 Identities=17% Similarity=0.136 Sum_probs=58.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC---CEEEEE-ECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG---CYVVGS-AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G---~~V~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+|.|+|+ |.+|.+.+.-+...| .+|+.+ .+++++.+.+.++++..... . +..+.+++ .|++|-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~----~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-D----DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-E----EHHHHHHH-----TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-C----ChHHhhcc-----CCEEEEEE
Confidence 4677785 999999999999999 789855 99999888887577754222 1 12223433 89999999
Q ss_pred ChhhHHHHHHhh---hcCCeEEEE
Q 019012 236 GGEMLDAALLNM---RDHGRIAVC 256 (347)
Q Consensus 236 g~~~~~~~~~~l---~~~G~~v~~ 256 (347)
-...+...++.+ .++..++++
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 876665555544 445555554
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.024 Score=47.23 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=61.6
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC-CCCc
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF-PQGI 228 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~-~g~~ 228 (347)
....++.+||-.|+ +.|..++.+++. |.+|++++.++.-.+.+++ ..+... ++.... ++ .+.. .+.|
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~----~~~~~~~~f 96 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DL----NNLTFDGEY 96 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-Ch----hhCCcCCCc
Confidence 34556789999994 457788888875 8899999999986666652 223221 111111 21 1111 2369
Q ss_pred cEEEeCCC----h-----hhHHHHHHhhhcCCeEEEEcc
Q 019012 229 DIYFDNVG----G-----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 229 d~vid~~g----~-----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+|+.+.. . ..++...++|+++|.++.+..
T Consensus 97 D~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 97 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred CEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 99987543 1 256778888999999765543
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.076 Score=44.90 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=65.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRC 223 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~ 223 (347)
+...++++++||-.| .+.|..++.+++..+. +|++++.+++..+.+++ ++|.+. ++.. +....+.
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~----d~~~~~~-- 142 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG----DGTQGWE-- 142 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC----CcccCCc--
Confidence 456788999999998 5678888888887654 79999999887766653 345432 2222 1111111
Q ss_pred CCCCccEEEeCCC-hhhHHHHHHhhhcCCeEEEE
Q 019012 224 FPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 224 ~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~ 256 (347)
..+.||+++-... ........+.|+++|+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 1136998875443 34556778899999998874
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.059 Score=45.79 Aligned_cols=74 Identities=18% Similarity=0.199 Sum_probs=51.1
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--CC-Ce--eeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 162 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--GF-DE--AFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 162 LI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--g~-~~--vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
||+||+|++|...++.+...|++|++++++.++.+.+.+.+ +. .+ ..|..+.+++...+.+. +.+|++|.+.|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999888889999999999877665544233 22 11 24555543444444432 36899999887
Q ss_pred h
Q 019012 237 G 237 (347)
Q Consensus 237 ~ 237 (347)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 3
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.067 Score=42.49 Aligned_cols=94 Identities=19% Similarity=0.170 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.++.+++|.|+ |.+|...++.+...| .+|++++++.++.+.+.++++... ..+.. +..+.+ .++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence 45789999996 999999999888886 589999998887766553555421 01111 111111 35999999
Q ss_pred CCChhhH-----HHHHHhhhcCCeEEEEcc
Q 019012 234 NVGGEML-----DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 258 (347)
|+..... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9986431 122344666777776654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.063 Score=46.22 Aligned_cols=81 Identities=20% Similarity=0.261 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHH---cCCC-e--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNK---LGFD-E--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.+.++||+||+|++|...+..+...|++|+++.+ ++++.+.+.++ .+.. . -+|..+.+.+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999988889999887654 33333322212 2321 1 1344443233333333322 35
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.1 Score=45.77 Aligned_cols=95 Identities=19% Similarity=0.145 Sum_probs=64.8
Q ss_pred cCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH
Q 019012 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV 217 (347)
Q Consensus 138 l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 217 (347)
+|++....+..+....---.|.+++|.|.+..+|.-++.++...|++|+++.+... ++.
T Consensus 138 ~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l~ 196 (286)
T PRK14175 138 VPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DMA 196 (286)
T ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence 34433334444422221357999999998666999999999999999998875321 233
Q ss_pred HHHHHHCCCCccEEEeCCChhh-HHHHHHhhhcCCeEEEEcccc
Q 019012 218 AALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 260 (347)
+.++ .+|+||.++|... +.. +.++++-.++.+|...
T Consensus 197 ~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 197 SYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 3343 3899999999763 333 4688888888888743
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.06 Score=47.06 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=48.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHHHcC----CC---eeeecCCHHHH----HHHHHHH--C
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKNKLG----FD---EAFNYNDETDL----VAALKRC--F 224 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~~~g----~~---~vi~~~~~~~~----~~~i~~~--~ 224 (347)
.++||+||++++|+..++.+...|++|+++++. +++.+.+.+++. .. ...|..+.+.. .+.+.+. .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999998999999987653 344433322332 11 12344443122 1222221 1
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
.+++|+++.+.|
T Consensus 82 ~g~iD~lv~nAG 93 (267)
T TIGR02685 82 FGRCDVLVNNAS 93 (267)
T ss_pred cCCceEEEECCc
Confidence 236999999887
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.093 Score=44.37 Aligned_cols=95 Identities=21% Similarity=0.253 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
-+|.+||=.|+.| |+++.-+|+ +|++|++++.+++-.+.++ ..... --+||... ..+.+.... +.||+|+.
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhcC-CCccEEEE
Confidence 4788999999755 455555554 5899999999999888876 32221 12567653 222332211 47999975
Q ss_pred C-----CCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 234 N-----VGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 234 ~-----~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
- +.. ..+..+.++++|+|.++...
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 2 222 36788999999999987754
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.056 Score=48.41 Aligned_cols=80 Identities=20% Similarity=0.198 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC-CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF-PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~-~g~~ 228 (347)
.+.++||+||++++|...++.+...|++|++++++. .+.+.+.+ ..|.. ...|..+.+.....+.+.. .+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 478999999999999999888888899999887643 22222221 23322 1234444322322222211 2579
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 91 D~li~nAG 98 (306)
T PRK07792 91 DIVVNNAG 98 (306)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.069 Score=48.80 Aligned_cols=79 Identities=14% Similarity=0.128 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEECChH--h-------------H-HHHHHHcCCC-e--eeecCCHH
Q 019012 156 KSGEYVFVSAASGAVGQL--VGQLAKLHGCYVVGSAGSSQ--K-------------V-DLLKNKLGFD-E--AFNYNDET 214 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~--ai~la~~~G~~V~~~~~~~~--~-------------~-~~~~~~~g~~-~--vi~~~~~~ 214 (347)
..++++||+|+++++|++ .++.+ ..|++|++++...+ + . +.++ +.|.. . ..|-.+++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 446899999999999999 45555 78999888874221 1 1 2344 55643 2 23444432
Q ss_pred HH---HHHHHHHCCCCccEEEeCCCh
Q 019012 215 DL---VAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 215 ~~---~~~i~~~~~g~~d~vid~~g~ 237 (347)
.. .+.+.+.. |++|+++.+++.
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~ 141 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCcc
Confidence 33 33344333 479999999884
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.054 Score=49.32 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+++++||=+| .+.|..+..+++..|++|++++.++...+.+++ +.|...-+..... +..+ + .+..+.||+|+
T Consensus 117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence 6788999998 456777888898889999999999987776652 2233211111110 1100 0 11224799998
Q ss_pred eCCCh-------hhHHHHHHhhhcCCeEEEEccc
Q 019012 233 DNVGG-------EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 233 d~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
-.... ..++++.+.|++||+++...+.
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~~ 225 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTWC 225 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 64332 2678889999999999987653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.08 Score=49.20 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=65.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHH------HHHHHc-CCC-eeeecCCHHHHHHHHHHHCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD------LLKNKL-GFD-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~------~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
+-..+.+|||+||+|.+|..++..+...|.+|++++++..+.+ ...+.. ++. ...|..+.+.+...++.. +
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~ 134 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-G 134 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-C
Confidence 3456779999999999999999999889999999998775421 111011 232 224555542444444432 1
Q ss_pred CCccEEEeCCChh-------------hHHHHHHhhhcC--CeEEEEccc
Q 019012 226 QGIDIYFDNVGGE-------------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 226 g~~d~vid~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
.++|+||+|.+.. .....++.+... +++|.++..
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 1699999988631 112344555443 478887754
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.074 Score=45.58 Aligned_cols=79 Identities=25% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
..++||+||+|.+|...++.+...|.+|+++.++..+ .+.+.+ ..+.. ...|..+.+++.+.+.+... +++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998899998776665442 222221 22221 12344444234433333211 368
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|.+|.+.|
T Consensus 86 d~vi~~ag 93 (249)
T PRK12825 86 DILVNNAG 93 (249)
T ss_pred CEEEECCc
Confidence 99999887
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.087 Score=47.62 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHHcCCC--e--eeecCCHHHHHHHHHHHCCCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNKLGFD--E--AFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~~g~~--~--vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
.+.++||+||+|.+|...+..+...| .+|++.+++..+...+.+.+... . ..|..+.+.+.+.++ ++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-----~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-----GVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-----cCCE
Confidence 36789999999999999888777665 68998887766544333233211 1 235554323333332 4899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
||.+.|
T Consensus 78 Vih~Ag 83 (324)
T TIGR03589 78 VVHAAA 83 (324)
T ss_pred EEECcc
Confidence 999887
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.064 Score=42.66 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecC---CHHHHHHHHHHHCC--CCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYN---DETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~---~~~~~~~~i~~~~~--g~~d~ 230 (347)
.+|-..||+|+.++.|+++...+...|+.|+..+-..++-+...+++|-..++.+. .+++....+..... |..|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 45667799999999999999999999999998888776654444389976555332 22244444433333 36899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
.++|.|-
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999984
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.06 Score=49.16 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH------------------hHHHHHHHcCCCeeeecCCH----
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ------------------KVDLLKNKLGFDEAFNYNDE---- 213 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~------------------~~~~~~~~~g~~~vi~~~~~---- 213 (347)
-.|.+|.|.| .|.+|+.+++.+...|++|++++.+.. +...+.+.+|+.. +...+.
T Consensus 205 l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~~~v~~~~ga~~-i~~~e~~~~~ 282 (411)
T COG0334 205 LEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERRGSVAEYAGAEY-ITNEELLEVD 282 (411)
T ss_pred cCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhhhhHHhhcCceE-cccccccccc
Confidence 4899999999 699999999999999999999998876 4455553445322 111100
Q ss_pred ------HHHHHHHHHHCCC--CccEEEeCCChhhHHHHHHhhhcCCeEEEEc
Q 019012 214 ------TDLVAALKRCFPQ--GIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 214 ------~~~~~~i~~~~~g--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g 257 (347)
.....+|...+-. .+.+|.+...+++-.++.+.+...|.++.-.
T Consensus 283 cDIl~PcA~~n~I~~~na~~l~ak~V~EgAN~P~t~eA~~i~~erGIl~~PD 334 (411)
T COG0334 283 CDILIPCALENVITEDNADQLKAKIVVEGANGPTTPEADEILLERGILVVPD 334 (411)
T ss_pred CcEEcccccccccchhhHHHhhhcEEEeccCCCCCHHHHHHHHHCCCEEcCh
Confidence 0011111111111 3567777777666677777777777665543
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.14 Score=43.21 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh------Hh-------------HHHHHH---HcCCCeeeecCCH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS------QK-------------VDLLKN---KLGFDEAFNYNDE 213 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~------~~-------------~~~~~~---~~g~~~vi~~~~~ 213 (347)
+...|+|.|. |++|-+++..+-..|+ +++.++-+. +| .+.+++ ..+...-++..+.
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 4578999996 9999999999999999 887776543 11 111111 1111111111111
Q ss_pred HHHHHHHHHHCCCCccEEEeCCCh-h-hHHHHHHhhhcCCeEEEEccccc
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGG-E-MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
.=..+.+.++...++|+|+||... . -...+..|.+.+=.+++.+...+
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 011233455555689999999986 3 23344445555667777665443
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.073 Score=45.79 Aligned_cols=80 Identities=19% Similarity=0.235 Sum_probs=49.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+.++||+||+|++|...++.+...|++|+.+. +++++.+.+.+ ..+.. ...|..+.+.+.+.+.+... +.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999998888888899887765 34443333221 23332 12354444244444433321 368
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.13 Score=43.54 Aligned_cols=99 Identities=16% Similarity=0.102 Sum_probs=62.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee--------------eecCCHHHHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA--------------FNYNDETDLVAA 219 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v--------------i~~~~~~~~~~~ 219 (347)
.+.++.+||+.| .|.|.-++.||. .|++|++++.++...+.+.++.+.... ++.... ++.+.
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence 345678999999 467888888886 699999999999988776434443210 010000 11100
Q ss_pred HHHHCCCCccEEEeCCC---------hhhHHHHHHhhhcCCeEEEEc
Q 019012 220 LKRCFPQGIDIYFDNVG---------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 220 i~~~~~g~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g 257 (347)
-.. ..+.||.++|... ...+....++|+++|++..+.
T Consensus 110 ~~~-~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 110 TAA-DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred Ccc-cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 000 1136899999664 125778888999998755543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.054 Score=47.60 Aligned_cols=73 Identities=23% Similarity=0.241 Sum_probs=47.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcC-------CC-e----eeecCCHHHHHHHHHHHCCC-
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG-------FD-E----AFNYNDETDLVAALKRCFPQ- 226 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g-------~~-~----vi~~~~~~~~~~~i~~~~~g- 226 (347)
|||+||+|++|...+..+...+. +++++++++.++-.+++++. .. . +-|.++ .+.+.+....
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd----~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRD----KERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCH----HHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccC----HHHHHHHHhhc
Confidence 79999999999988888877786 89999999998877765662 11 1 114433 2345555444
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
++|+||.++.-
T Consensus 77 ~pdiVfHaAA~ 87 (293)
T PF02719_consen 77 KPDIVFHAAAL 87 (293)
T ss_dssp T-SEEEE----
T ss_pred CCCEEEEChhc
Confidence 79999999874
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.056 Score=48.78 Aligned_cols=93 Identities=19% Similarity=0.155 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAK-LHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~-~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
-.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.++...+.++++...+. ++.+.+. .+|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence 467899999999999988887775 4576 8999998888777766455421111 2222222 4899999
Q ss_pred CCChh-hHHHHHHhhhcCCeEEEEccc
Q 019012 234 NVGGE-MLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 234 ~~g~~-~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+++.. .+..--..+++.-.++.++.+
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence 98863 221122345666667777765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.19 Score=41.67 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=42.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++||+||++++|...+..+... .+|++++++... ..+|..+.+++.+.+.+. +++|+++.+.|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~--~~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKV--GKVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence 6899999999999877777666 899998876431 123444432344444432 36899998887
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.079 Score=45.98 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----HhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----QKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF-- 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~-- 224 (347)
.+.++||+||+|++|.+.++.+...|++|++++++. ++.+.+.+ ..+.. ..+|..+.++....+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 467999999999999999999988999976665432 22222211 23432 1245554423333333322
Q ss_pred CCCccEEEeCCCh
Q 019012 225 PQGIDIYFDNVGG 237 (347)
Q Consensus 225 ~g~~d~vid~~g~ 237 (347)
.+.+|++|.+.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 1368999998873
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.09 Score=44.46 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=50.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-CCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-GFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
..++||+||+|.+|...+..+... .+|++++++.++.+.+.+.. +.. ...|..+.+++...+.+. +++|++|.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 358999999999999888777666 99999999887766555232 221 123444432333333221 2699999988
Q ss_pred Ch
Q 019012 236 GG 237 (347)
Q Consensus 236 g~ 237 (347)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 73
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.1 Score=46.08 Aligned_cols=98 Identities=12% Similarity=0.091 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHc----CCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKL----GFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
.++++|+-.| +|+.++.++.+++.+ +.+++.++.+++..+.+++.+ |...-+..... +..+.... .+.||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FD 197 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYD 197 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcC
Confidence 3789999999 599999888888655 458999999999888887433 22222332222 22221111 13799
Q ss_pred EEEeCC------Ch--hhHHHHHHhhhcCCeEEEEc
Q 019012 230 IYFDNV------GG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 230 ~vid~~------g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
+||-.+ .. ..++...+.|++||.++.-.
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 998764 11 36889999999999988653
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.24 Score=44.49 Aligned_cols=40 Identities=20% Similarity=0.117 Sum_probs=33.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
.+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~ 47 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALR 47 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 57999996 99999988888889999999999987655443
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.05 Score=45.25 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=61.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
......++.+||-.|+ +.|..++.+++ .|.+|++++.++.-.+.+++ ..+.. +..... +... . . ..+.
T Consensus 24 ~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~ 94 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNED 94 (195)
T ss_pred HHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCC
Confidence 3344555678999984 56777777776 48899999999887666542 22332 111110 1110 0 0 1236
Q ss_pred ccEEEeCCC-----h----hhHHHHHHhhhcCCeEEEEccc
Q 019012 228 IDIYFDNVG-----G----EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 228 ~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+|+|+.+.. . ..++.+.++|+++|.++.+.+.
T Consensus 95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~~ 135 (195)
T TIGR00477 95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAAM 135 (195)
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 999976422 1 3667888899999997666543
|
Part of a tellurite-reducing operon tehA and tehB |
| >COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.14 Score=44.93 Aligned_cols=95 Identities=16% Similarity=0.200 Sum_probs=66.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCee-e-ecCCH---HHHHHHHHHHCCCCccEEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEA-F-NYNDE---TDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~v-i-~~~~~---~~~~~~i~~~~~g~~d~vi 232 (347)
++|||.| |+-|-.+=.++++... +++++..+++=.+.+++-++.... . |.+-. +|..+.+++... .||++|
T Consensus 78 k~VLiiG--gGdG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi 154 (282)
T COG0421 78 KRVLIIG--GGDGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVII 154 (282)
T ss_pred CeEEEEC--CCccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEE
Confidence 5999999 6677777788888876 999999999888888855553221 1 12110 255556665444 799986
Q ss_pred -eCCCh----------hhHHHHHHhhhcCCeEEEE
Q 019012 233 -DNVGG----------EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 233 -d~~g~----------~~~~~~~~~l~~~G~~v~~ 256 (347)
|++.. +.++.+.++|+++|.++.-
T Consensus 155 ~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 155 VDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred EcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 54432 2678899999999999886
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.056 Score=48.28 Aligned_cols=39 Identities=10% Similarity=0.183 Sum_probs=32.4
Q ss_pred CCCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEECChHhH
Q 019012 156 KSGEYVFVSAA--SGAVGQLVGQLAKLHGCYVVGSAGSSQKV 195 (347)
Q Consensus 156 ~~~~~vLI~Ga--~g~~G~~ai~la~~~G~~V~~~~~~~~~~ 195 (347)
-.|+++||+|| ++++|.++++.+...|++|++ ++...++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 35889999999 799999999999999999988 4444433
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.086 Score=45.36 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=48.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+++||+||+|++|...++.+...|++|+++. ++.++.+.+.+ ..+.. ..+|..+.+++.+.+.+.. .+.+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5799999999999999999888899987765 44443332221 22321 1234444323443333332 13689
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9998887
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.12 Score=46.34 Aligned_cols=89 Identities=16% Similarity=0.226 Sum_probs=60.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.+|.|+|+ |.+|.+.+..++..|. +|++.++++++.+.++ +.|....+.. +..+.+ ..+|+||.|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~----~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTT----SAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecC----CHHHHh-----cCCCEEEECCC
Confidence 57999994 9999999998888885 8999999998888888 7775211111 111122 24889999987
Q ss_pred hhh----HHHHHHhhhcCCeEEEEcc
Q 019012 237 GEM----LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~~~----~~~~~~~l~~~G~~v~~g~ 258 (347)
... +......++++..++.++.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 643 3333345566666666654
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.16 Score=48.75 Aligned_cols=72 Identities=22% Similarity=0.359 Sum_probs=52.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcC-CC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG-FD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+.+.++ .. .+.... +..+.+. .+|+||.|
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---dl~~al~-----~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---EMLACAA-----EADVVFTS 336 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---hHHHHHh-----cCCEEEEc
Confidence 689999997 9999999999999998 89999999888777764564 22 111111 2222222 48999999
Q ss_pred CChh
Q 019012 235 VGGE 238 (347)
Q Consensus 235 ~g~~ 238 (347)
++..
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 9863
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.16 Score=43.32 Aligned_cols=90 Identities=17% Similarity=0.236 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEECC----hHh--------HHHHHHHcCCCeeeecCCHHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC---YVVGSAGS----SQK--------VDLLKNKLGFDEAFNYNDETDLVAAL 220 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~---~V~~~~~~----~~~--------~~~~~~~~g~~~vi~~~~~~~~~~~i 220 (347)
-.+.+++|+|+ |+.|.+++..+...|+ ++++++++ .++ .++++ .++... .+ . ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence 45789999997 9999999998888898 48898887 333 22333 433211 11 1 333333
Q ss_pred HHHCCCCccEEEeCCChhhH-HHHHHhhhcCCeEEEEc
Q 019012 221 KRCFPQGIDIYFDNVGGEML-DAALLNMRDHGRIAVCG 257 (347)
Q Consensus 221 ~~~~~g~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 257 (347)
+ ++|++|.+++...+ ...++.|.++..+..+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2 38999999974332 46667777766555443
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.065 Score=48.34 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCC---Cee--eecCCHHHHHHHHHHHCCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGF---DEA--FNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~---~~v--i~~~~~~~~~~~i~~~~~g~ 227 (347)
..+.++||+||+|.+|...+..+...|++|++++++..+.+..... .+. ... .|..+.+.+.+.+. +
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~ 77 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----G 77 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----C
Confidence 3478999999999999999999988999998887776543322201 111 112 24444312322232 4
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+||.+++
T Consensus 78 ~d~vih~A~ 86 (325)
T PLN02989 78 CETVFHTAS 86 (325)
T ss_pred CCEEEEeCC
Confidence 899999887
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.11 Score=45.15 Aligned_cols=40 Identities=30% Similarity=0.335 Sum_probs=32.0
Q ss_pred EEEEEcCCchHHHHHHHHH-HH---CCCEEEEEECChHhHHHHH
Q 019012 160 YVFVSAASGAVGQLVGQLA-KL---HGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la-~~---~G~~V~~~~~~~~~~~~~~ 199 (347)
.+||+||++++|++.+..+ +. .|++|+.+++++++.+.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~ 45 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK 45 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH
Confidence 5899999999998866544 42 6999999999888766654
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.23 Score=45.28 Aligned_cols=97 Identities=20% Similarity=0.266 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHH--HHHHHc-CC-C--ee--eecCCHHHHHHHHHHHCCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD--LLKNKL-GF-D--EA--FNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~--~~~~~~-g~-~--~v--i~~~~~~~~~~~i~~~~~g~ 227 (347)
.++.+|||+||+|.+|...+..+...|.+|++++++.++.. .+. .+ +. . .. .|..+..++.+.++ +
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~ 81 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLR-ELEGGKERLILCKADLQDYEALKAAID-----G 81 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHH-HhhCCCCcEEEEecCcCChHHHHHHHh-----c
Confidence 35679999999999999999999889999999998765321 122 22 11 1 12 24333313333332 4
Q ss_pred ccEEEeCCCh--h-----------hHHHHHHhhhcCC--eEEEEcc
Q 019012 228 IDIYFDNVGG--E-----------MLDAALLNMRDHG--RIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~g~--~-----------~~~~~~~~l~~~G--~~v~~g~ 258 (347)
+|+||.+.+. . .....++++.+.| +++.++.
T Consensus 82 ~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 82 CDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 8999998863 1 1233455555544 7877664
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.099 Score=44.86 Aligned_cols=79 Identities=18% Similarity=0.196 Sum_probs=50.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+++||+||+|++|...++.+...|++|+++ .++.++.+.... ..+.. ...|..+.+++.+.+.+.. .+.+|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 479999999999999999888889998764 455544332221 22321 2245554424444444332 24789
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999873
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.11 Score=47.86 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=36.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
..+++|||+||+|.+|..++..+...|++|+++.++.++.+.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 55789999999999999999999999999998887766554444
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.11 Score=45.19 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECC-----------hHhH----HHHHHHcCCC---eeeecCCHHH
Q 019012 156 KSGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGS-----------SQKV----DLLKNKLGFD---EAFNYNDETD 215 (347)
Q Consensus 156 ~~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~-----------~~~~----~~~~~~~g~~---~vi~~~~~~~ 215 (347)
-+|.++||+||+ +++|...+..+...|++|++++++ ..+. +.++ +.|.. ..+|..+.++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHH
Confidence 357899999997 489999999988899999887532 1111 2223 33442 1234444324
Q ss_pred HHHHHHHHCC--CCccEEEeCCC
Q 019012 216 LVAALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 216 ~~~~i~~~~~--g~~d~vid~~g 236 (347)
..+.+.+... +.+|++|.+.|
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag 105 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAA 105 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCC
Confidence 4444433322 35899999887
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.44 Score=40.48 Aligned_cols=95 Identities=21% Similarity=0.163 Sum_probs=62.8
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH---HcCCC-eeeecCCHHHHHHHHHHHCCCC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN---KLGFD-EAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~---~~g~~-~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
..+.++++||-.|+ |. |..++.+++. ++ +|++++.++...+.+++ ..+.. .+++. ++.+.+ ..+.
T Consensus 32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~~---~~~~ 101 (223)
T PRK14967 32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARAV---EFRP 101 (223)
T ss_pred cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhhc---cCCC
Confidence 45678899999995 54 8888888875 66 99999999987776652 23432 22222 332222 2247
Q ss_pred ccEEEeCCC---------------------h-------hhHHHHHHhhhcCCeEEEEc
Q 019012 228 IDIYFDNVG---------------------G-------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 228 ~d~vid~~g---------------------~-------~~~~~~~~~l~~~G~~v~~g 257 (347)
||+|+.... . ..+..+.+.|+++|+++.+.
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999986521 0 13456788999999998763
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.14 Score=45.40 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh---HhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS---QKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~---~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
.+.++||+|+ |+.+.+++..+...|+ +|+++.++. +|.+.+.++++.. ..+..... +-...+.+. ...+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEA-LASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhh-cccCCE
Confidence 5679999996 8889987777777898 899999984 3544444345321 11111110 101112211 125899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
+++|+.
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999886
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.13 Score=47.65 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=62.6
Q ss_pred CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEECChHhHHH-----------HHHHcCCCeeeecCCHHHHHHHHH
Q 019012 157 SGEYVFVS----AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL-----------LKNKLGFDEAFNYNDETDLVAALK 221 (347)
Q Consensus 157 ~~~~vLI~----Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~-----------~~~~~g~~~vi~~~~~~~~~~~i~ 221 (347)
...+|||+ ||+|-+|...+..+...|.+|++++++...... +. ..|+. .+..+-. + +.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~-~v~~D~~-d----~~ 123 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVK-TVWGDPA-D----VK 123 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCce-EEEecHH-H----HH
Confidence 34689999 999999999999888889999999987654221 12 22332 2222111 2 22
Q ss_pred HHCCC-CccEEEeCCChh--hHHHHHHhhhcCC--eEEEEccc
Q 019012 222 RCFPQ-GIDIYFDNVGGE--MLDAALLNMRDHG--RIAVCGMV 259 (347)
Q Consensus 222 ~~~~g-~~d~vid~~g~~--~~~~~~~~l~~~G--~~v~~g~~ 259 (347)
+.... ++|+|+++.+.+ .....++++...| ++|.++..
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 22223 799999998753 3556667666544 78877654
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.1 Score=44.51 Aligned_cols=102 Identities=23% Similarity=0.246 Sum_probs=67.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHHc--CCCeeeecCCHHHHHHHHHHHCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNKL--GFDEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~~--g~~~vi~~~~~~~~~~~i~~~~~g 226 (347)
+...+.++++||-.|+ | .|..+..+++..+ .++++++.+++..+.++ +. .....+..... +... + .+..+
T Consensus 13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~-~~~~~~~~~~~~~~~-d~~~-~-~~~~~ 86 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAK-ERAAGLGPNVEFVRG-DADG-L-PFPDG 86 (241)
T ss_pred HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HHhhCCCCceEEEec-cccc-C-CCCCC
Confidence 5567889999999995 4 3888889998873 59999999998888887 43 11111111110 1100 0 11224
Q ss_pred CccEEEeCCC-----h--hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVG-----G--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.||+|+-... . ..+..+.++|+++|.++....
T Consensus 87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 87 SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 6898875432 1 367889999999999987653
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.12 Score=44.48 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=48.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHH-----HCC-CCccE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKR-----CFP-QGIDI 230 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~-----~~~-g~~d~ 230 (347)
++||+||+|++|...++.+...|++|++++++.++ +... ..+.. ..+|..+.+++...+.+ +.. +..|+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 69999999999999999888889999999987653 2222 33421 12455544233332322 122 26788
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++.+.|
T Consensus 81 ~v~~ag 86 (243)
T PRK07023 81 LINNAG 86 (243)
T ss_pred EEEcCc
Confidence 888776
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.12 Score=44.36 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=49.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcC---CC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLG---FD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g---~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
+++||+|++|++|..+++.+...|++|++++++.. ......+.+. .. ...|..+.+++.+.+.+.. .+.+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999988888999999998743 1121211222 11 1234444323333333322 13699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++.+.|
T Consensus 83 ~vi~~ag 89 (245)
T PRK12824 83 ILVNNAG 89 (245)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.22 Score=43.26 Aligned_cols=94 Identities=18% Similarity=0.214 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCCCCcc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
.++.+||=.| ++.|..+..+++. |.+|++++.+++..+.+++. .|.. .++...-. + +.....+.||
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~-~----l~~~~~~~fD 114 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQ-D----IAQHLETPVD 114 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHH-H----HhhhcCCCCC
Confidence 4567888888 5677888888875 88999999999888777632 2321 12222211 2 2222334799
Q ss_pred EEEeCCC-----h--hhHHHHHHhhhcCCeEEEEc
Q 019012 230 IYFDNVG-----G--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 230 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g 257 (347)
+|+-... . ..+..+.+.|+++|+++.+-
T Consensus 115 ~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 115 LILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred EEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 9985432 1 35788999999999998653
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.45 Score=39.16 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=63.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~ 224 (347)
....+.++.+||=.|+ +.|..++.+++.. +.+|++++.+++..+.+++ .++... ++.. +... ..
T Consensus 25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~----d~~~----~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG----EAPI----EL 94 (187)
T ss_pred HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec----Cchh----hc
Confidence 4456678899998883 4577777788776 4699999999987777653 234322 2222 2111 11
Q ss_pred CCCccEEEeCCC-h---hhHHHHHHhhhcCCeEEEE
Q 019012 225 PQGIDIYFDNVG-G---EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 225 ~g~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~ 256 (347)
.+.+|+++.... . ..++.+.+.|+++|+++..
T Consensus 95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 236999986442 1 3667888999999998764
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.11 Score=44.17 Aligned_cols=98 Identities=18% Similarity=0.208 Sum_probs=64.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE- 238 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~- 238 (347)
|||+||+|-+|...+..+...|..|+...++...........+.. ...|..+.+.+.+.++.. .+|.||.+.+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~~~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAFSS 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecccc
Confidence 799999999999999999999999998888777655444123332 234555542444444432 589999988741
Q ss_pred -----------------hHHHHHHhhhc-C-CeEEEEccccc
Q 019012 239 -----------------MLDAALLNMRD-H-GRIAVCGMVSL 261 (347)
Q Consensus 239 -----------------~~~~~~~~l~~-~-G~~v~~g~~~~ 261 (347)
.....++.+.. + .+++.++....
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~ 119 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASV 119 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccc
Confidence 11234444443 3 38888886533
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.089 Score=45.18 Aligned_cols=81 Identities=22% Similarity=0.246 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC----ChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG----SSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF-- 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~----~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~-- 224 (347)
.+.++||+||+|++|...+..+...|++|+++++ +.++.+.+.+ ..+.. ...|..+.+.+...+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999888889999988654 2333332221 22321 1234444323333333221
Q ss_pred CCCccEEEeCCCh
Q 019012 225 PQGIDIYFDNVGG 237 (347)
Q Consensus 225 ~g~~d~vid~~g~ 237 (347)
.+++|.+|.+.|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 1368999998873
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.27 Score=42.75 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=66.3
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCC-CCc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGI 228 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~-g~~ 228 (347)
....+.++++||=+|+ +.|..+..+++.. +.+|++++.++...+.+++.+.-..++.. +.. ++.. +.+
T Consensus 25 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~----~~~~~~~f 94 (258)
T PRK01683 25 ARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIA----SWQPPQAL 94 (258)
T ss_pred hhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chh----ccCCCCCc
Confidence 4456678899999994 4677788888776 56999999999888888733322222222 211 1122 379
Q ss_pred cEEEeCCCh-------hhHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYFDNVGG-------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g 257 (347)
|+|+-...- ..+....+.|+++|+++...
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 999865441 26788899999999988753
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.15 Score=43.40 Aligned_cols=84 Identities=17% Similarity=0.174 Sum_probs=59.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH-HHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK-NKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+++|.|+ |.+|...++.+...|.+|++++.++++.++.. ++++. +++..+. .-.+.+++..-..+|+++-+++.+
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~--t~~~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDA--TDEDVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecC--CCHHHHHhcCCCcCCEEEEeeCCC
Confidence 5789996 99999999999999999999999999877744 13554 3443332 123345554444899999999986
Q ss_pred hHHHHHHhh
Q 019012 239 MLDAALLNM 247 (347)
Q Consensus 239 ~~~~~~~~l 247 (347)
..+..+-.+
T Consensus 78 ~~N~i~~~l 86 (225)
T COG0569 78 EVNSVLALL 86 (225)
T ss_pred HHHHHHHHH
Confidence 544444433
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.078 Score=47.76 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~ 196 (347)
.|.+|||+||+|.+|...+..+...|.+|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 4789999999999999999988888999998888765433
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.062 Score=46.23 Aligned_cols=105 Identities=18% Similarity=0.235 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHH-HHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLV-AALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~-~~i~~~~ 224 (347)
...+++||++||=.| .|.|.++..+++..|- +|+..+.++++.+.+++. +|....+..... |.. +-+.+-.
T Consensus 34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~ 110 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL 110 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence 558899999999988 6678888889988864 999999999988877643 455422221111 221 1111111
Q ss_pred CCCccEEE-eCCCh-hhHHHHHHhh-hcCCeEEEEcc
Q 019012 225 PQGIDIYF-DNVGG-EMLDAALLNM-RDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vi-d~~g~-~~~~~~~~~l-~~~G~~v~~g~ 258 (347)
.+.+|.|| |--.. ..+..+.+.| +++|+++++..
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 23688776 44333 5899999999 89999999853
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.085 Score=42.16 Aligned_cols=43 Identities=21% Similarity=0.251 Sum_probs=39.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
.|..||++|+.-++|+..++-+...|++|+++.+.++.+..+-
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV 48 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV 48 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence 5788999999888999999999999999999999999887766
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.074 Score=44.49 Aligned_cols=103 Identities=22% Similarity=0.270 Sum_probs=69.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----Ceee----ecCCHHHHHHHHHHHCC--CC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----DEAF----NYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~~vi----~~~~~~~~~~~i~~~~~--g~ 227 (347)
|+++++.|+.|++|+.....+...|+++.++..+.+..+... +|.+ ..++ |.....+..+..++... |.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 889999999999999998888888999999888888766665 5543 2221 22222245555554433 46
Q ss_pred ccEEEeCCCh--h-hH---------------HHHHHhh-----hcCCeEEEEccccc
Q 019012 228 IDIYFDNVGG--E-ML---------------DAALLNM-----RDHGRIAVCGMVSL 261 (347)
Q Consensus 228 ~d~vid~~g~--~-~~---------------~~~~~~l-----~~~G~~v~~g~~~~ 261 (347)
.|++++..|- + .+ ..++..+ .++|.+|.+++..+
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G 140 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG 140 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence 8999998883 1 11 2234444 35789999987655
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.33 Score=42.20 Aligned_cols=94 Identities=19% Similarity=0.189 Sum_probs=66.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC-CCCc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGI 228 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~-~g~~ 228 (347)
......++++||=+|+ +.|..+..+++.. +.+|++++.++.-.+.++ +.+++ ++.. +. .++. .+.|
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~-~~~~----d~----~~~~~~~~f 90 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVD-ARTG----DV----RDWKPKPDT 90 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCc-EEEc----Ch----hhCCCCCCc
Confidence 4456678899999994 4477778888776 679999999999888887 65543 2222 21 1122 2379
Q ss_pred cEEEeCCC-------hhhHHHHHHhhhcCCeEEEE
Q 019012 229 DIYFDNVG-------GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 229 d~vid~~g-------~~~~~~~~~~l~~~G~~v~~ 256 (347)
|+|+-... ...+..+.+.|+++|+++..
T Consensus 91 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 91 DVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred eEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 99987553 13577888999999999875
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.11 Score=45.03 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECC-----------hHhHHHHHH---HcCCC---eeeecCCHHHHH
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGS-----------SQKVDLLKN---KLGFD---EAFNYNDETDLV 217 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~-----------~~~~~~~~~---~~g~~---~vi~~~~~~~~~ 217 (347)
.+.++||+||++ ++|.+.+..+...|++|++++++ ......+.+ ..+.. ..+|..+..+..
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 467899999974 89999888887889999999876 221111211 22321 123544432333
Q ss_pred HHHHHHCC--CCccEEEeCCC
Q 019012 218 AALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 218 ~~i~~~~~--g~~d~vid~~g 236 (347)
..+.+... +.+|++|.+.|
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag 104 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAA 104 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 33333321 36899999886
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.072 Score=46.19 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=54.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee-ecCCHHHHHHHHHHHCCCCccEEEeCCCh-
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYNDETDLVAALKRCFPQGIDIYFDNVGG- 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~g~~d~vid~~g~- 237 (347)
+|||+||+| -|...+..+...|.+|+++..++.+.+.+. ..|...+. +.-+..++.+.+++ .++|+|+|++..
T Consensus 2 ~ILvlGGT~-egr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l~~~~l~~~l~~---~~i~~VIDAtHPf 76 (256)
T TIGR00715 2 TVLLMGGTV-DSRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGALDPQELREFLKR---HSIDILVDATHPF 76 (256)
T ss_pred eEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCCCHHHHHHHHHh---cCCCEEEEcCCHH
Confidence 699999866 498888777778999999999888767676 55544343 22221132233322 379999999874
Q ss_pred --hhHHHHHHhhhc
Q 019012 238 --EMLDAALLNMRD 249 (347)
Q Consensus 238 --~~~~~~~~~l~~ 249 (347)
..-+.+.+....
T Consensus 77 A~~is~~a~~a~~~ 90 (256)
T TIGR00715 77 AAQITTNATAVCKE 90 (256)
T ss_pred HHHHHHHHHHHHHH
Confidence 233344444444
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.12 Score=47.61 Aligned_cols=36 Identities=19% Similarity=0.085 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.|.+|.|+|. |.+|+..++.++.+|.+|++.+++..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~ 226 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRL 226 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 5679999995 99999999999999999999998753
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.16 Score=43.77 Aligned_cols=40 Identities=18% Similarity=0.362 Sum_probs=33.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLL 198 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~ 198 (347)
+++||+||+|++|.+.++.+...|++|+++++++ ++.+.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~ 42 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL 42 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH
Confidence 4799999999999999988888899999999876 343433
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.19 Score=47.40 Aligned_cols=44 Identities=20% Similarity=0.382 Sum_probs=36.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH-HHHHHHcCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKLGF 204 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~~~g~ 204 (347)
+|.|+||.|.+|.+.+..++..|.+|++.++++++. +.+. ++|+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence 588999789999999999999999999999887764 3444 6665
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.14 Score=46.37 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.|++|.|+|- |.+|...++.++..|.+|++.+++..
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 5789999995 99999999999999999999987654
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.13 Score=47.42 Aligned_cols=46 Identities=24% Similarity=0.286 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
.|.+|.|+| .|.+|...++.++..|.+|++.+++....+... +.|+
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~ 243 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGA 243 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCc
Confidence 578999999 599999999999999999999887643333333 4443
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.24 Score=41.38 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 191 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~ 191 (347)
.+.+|+|.|+ |++|..+++.+...|. ++++++.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 3578999995 9999999999999999 88888876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.25 Score=41.77 Aligned_cols=90 Identities=14% Similarity=0.126 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHH-HHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVA-ALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~-~i~~~~~g~~d~vid~ 234 (347)
++.+|||.|| |.++.-=+..+...|++|++++..-. .+..+. ..|.-..+. + ++.+ .+ .++++||-|
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~-r---~~~~~dl-----~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIK-G---NYDKEFI-----KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe-C---CCChHHh-----CCCcEEEEC
Confidence 5779999997 99998878888889999999886432 222232 223212221 1 1111 11 268999999
Q ss_pred CChhhHHHHHHhh-hcCCeEEEEc
Q 019012 235 VGGEMLDAALLNM-RDHGRIAVCG 257 (347)
Q Consensus 235 ~g~~~~~~~~~~l-~~~G~~v~~g 257 (347)
++...++..+... +..+.++...
T Consensus 93 TdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 93 TDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEc
Confidence 9987666555554 4557666654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.23 Score=40.69 Aligned_cols=76 Identities=18% Similarity=0.216 Sum_probs=42.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh-------HhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCC--C
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS-------QKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~-------~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--g 226 (347)
++||+|+.|++|+..++.+...|+ +++.+.++. +..+.++ +.|..- -+|..+++.+.+.+.++.. +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 689999999999998888888877 999999982 1234444 445521 1243443233333333221 2
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.++.||.+.|
T Consensus 81 ~i~gVih~ag 90 (181)
T PF08659_consen 81 PIDGVIHAAG 90 (181)
T ss_dssp -EEEEEE---
T ss_pred Ccceeeeeee
Confidence 4666666655
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.19 Score=43.23 Aligned_cols=81 Identities=26% Similarity=0.306 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHcC-----CC--eeeecCC-HHHHHHHHHHHC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKLG-----FD--EAFNYND-ETDLVAALKRCF-- 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~g-----~~--~vi~~~~-~~~~~~~i~~~~-- 224 (347)
.++.+||+||++++|++++..+...|++|+++.+..++ .+.+.+... .. ...|..+ .+.....+.+..
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 46889999999999999888888999998888776543 233331222 11 1245554 323332233222
Q ss_pred CCCccEEEeCCCh
Q 019012 225 PQGIDIYFDNVGG 237 (347)
Q Consensus 225 ~g~~d~vid~~g~ 237 (347)
-|++|+++++.|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 2368999998883
|
|
| >KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.36 Score=42.83 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=46.6
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh---HhHHHHHHHcCCCee
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS---QKVDLLKNKLGFDEA 207 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~---~~~~~~~~~~g~~~v 207 (347)
.+.+.||.++||-.-+|.+|...+-.+...|.+++++-.+. +|...++ .+|+.-+
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaeii 154 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEII 154 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEEE
Confidence 36789999999999999999999999999999998887644 6777788 8998533
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.31 Score=42.98 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|++++|.|+++-+|...+.++...|++|+++.+.. . ++.+.+ ..+|+++.++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~-----~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELV-----KQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHh-----ccCCEEEEcc
Confidence 5789999999744599999999999999887776421 1 222222 2489999999
Q ss_pred ChhhHHHHHHhhhcCCeEEEEcccc
Q 019012 236 GGEMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 236 g~~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
|.+.+ -..+.++++-.++.+|...
T Consensus 211 G~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 211 GKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred CCCCc-CCHHHcCCCCEEEEEEEee
Confidence 86432 2235688888888888643
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.19 Score=38.15 Aligned_cols=90 Identities=18% Similarity=0.157 Sum_probs=52.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChH-hHHHHHHHcC----C-CeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQ-KVDLLKNKLG----F-DEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~-~~~~~~~~~g----~-~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+|.|.||+|-+|...++++..+ .++++.+..++. ....+.+.++ . +..+..... ..+ ..+|+||
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADP-------EEL--SDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSG-------HHH--TTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecch-------hHh--hcCCEEE
Confidence 5899999999999999999776 456554443333 3222321222 2 112222111 111 3599999
Q ss_pred eCCChhhHHHHHHhh-hcCCeEEEEcc
Q 019012 233 DNVGGEMLDAALLNM-RDHGRIAVCGM 258 (347)
Q Consensus 233 d~~g~~~~~~~~~~l-~~~G~~v~~g~ 258 (347)
.|++.....+....+ .++-+++....
T Consensus 72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 72 LALPHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence 999987655555555 55556666543
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.16 Score=43.20 Aligned_cols=76 Identities=25% Similarity=0.303 Sum_probs=48.2
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHH----HHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccE
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVD----LLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDI 230 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~----~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~ 230 (347)
+||+|++|.+|...+..+...|++|++++++. ++.+ .++ ..|.. ...|..+...+.+.+.+.. .+.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK-AYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999988899999998764 2222 222 33431 2345555423323232221 136899
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
++.+.|.
T Consensus 80 vi~~ag~ 86 (239)
T TIGR01830 80 LVNNAGI 86 (239)
T ss_pred EEECCCC
Confidence 9998873
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.4 Score=42.06 Aligned_cols=93 Identities=18% Similarity=0.091 Sum_probs=63.6
Q ss_pred CChhhhHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH
Q 019012 139 GMPGFTAYAGFHEVCSP-KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV 217 (347)
Q Consensus 139 ~~~~~ta~~al~~~~~~-~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 217 (347)
|++....+..| +.-++ -.|.+|+|.|.+..+|.-.+.++...|+.|+++.+... ++.
T Consensus 138 PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~l~ 195 (285)
T PRK14191 138 PATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------DLS 195 (285)
T ss_pred CCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------HHH
Confidence 43333333334 33344 46999999998779999999999999999987643221 333
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 218 AALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+.+++ +|+++-++|...+- .-+.++++..++.+|..
T Consensus 196 ~~~~~-----ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 196 FYTQN-----ADIVCVGVGKPDLI-KASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHh-----CCEEEEecCCCCcC-CHHHcCCCcEEEEeecc
Confidence 33443 89999999975432 23567899999999863
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.19 Score=45.09 Aligned_cols=37 Identities=16% Similarity=0.132 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
..|.+|.|+| .|.+|...++.++..|.+|++.+++.+
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3678999999 599999999999999999999887544
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.17 Score=39.94 Aligned_cols=96 Identities=17% Similarity=0.258 Sum_probs=64.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCH-----HHHHHHHHHHCCC-CccEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE-----TDLVAALKRCFPQ-GIDIY 231 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~-----~~~~~~i~~~~~g-~~d~v 231 (347)
..+|+|+|+-|.+|.++++..|..+.-|.-++-++.. +....-+++.++. +...+++.+...+ .+|.|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe------~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE------QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc------cccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 3579999999999999999999999988888877653 2222234444431 1333344444556 89999
Q ss_pred EeCCCh----h-----hH------------------HHHHHhhhcCCeEEEEccc
Q 019012 232 FDNVGG----E-----ML------------------DAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 232 id~~g~----~-----~~------------------~~~~~~l~~~G~~v~~g~~ 259 (347)
|-..|+ . .+ ..+...|+++|-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence 986653 1 11 1234568889988887753
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.073 Score=47.87 Aligned_cols=71 Identities=24% Similarity=0.220 Sum_probs=48.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++||+||+|.+|...++.+...|.+|++++++.++...+. ..+... ..|..+.+.+.+.+. ++|+||.+.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~l~~~~~-----~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDPASLRKAVA-----GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCHHHHHHHHh-----CCCEEEEece
Confidence 6899999999999999999889999999998776543333 334432 235544312322222 4799998875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.076 Score=50.61 Aligned_cols=77 Identities=22% Similarity=0.335 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh---------------------HhHHHHHHHcCCCeeeecCCHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS---------------------QKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~---------------------~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
.++++|+|.|+ |+.|+.++..++..|.+|++.+..+ ...+.++ ++|++..++..-..
T Consensus 139 ~~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~-~~Gv~~~~~~~v~~ 216 (467)
T TIGR01318 139 PTGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFT-AMGIEFHLNCEVGR 216 (467)
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHH-HCCCEEECCCEeCC
Confidence 36789999996 9999999999999999999887653 2346667 78876444332110
Q ss_pred HHHHHHHHHCCCCccEEEeCCCh
Q 019012 215 DLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
++ .+.... .++|.||.++|.
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa 236 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGT 236 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCC
Confidence 11 111111 259999999986
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.25 Score=45.17 Aligned_cols=76 Identities=21% Similarity=0.188 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--CC-Cee--eecCCHHHHHHHHHHHCCCCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--GF-DEA--FNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--g~-~~v--i~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
..+.+|||+||+|.+|...++.+...|.+|++++++.++.+.+...+ +. ..+ .|..+...+.+.+ . ++|+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----~-~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV----K-GCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH----c-CCCE
Confidence 45678999999999999999999889999999888766544433122 11 112 2333321222222 2 4899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
||.+.+
T Consensus 83 Vih~A~ 88 (353)
T PLN02896 83 VFHVAA 88 (353)
T ss_pred EEECCc
Confidence 998876
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.33 Score=42.35 Aligned_cols=100 Identities=17% Similarity=0.172 Sum_probs=65.7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHHcC------CC--eeeecCCHHHHHHHHH
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNKLG------FD--EAFNYNDETDLVAALK 221 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~~g------~~--~vi~~~~~~~~~~~i~ 221 (347)
...+.++++||-.|+ +.|..+..+++..| .+|++++.+++-.+.++++.. .. ..+..+.. + +
T Consensus 68 ~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~-~----l- 139 (261)
T PLN02233 68 WSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDAT-D----L- 139 (261)
T ss_pred HhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccc-c----C-
Confidence 356788999999985 44667777887765 499999999998887763322 11 11211111 1 1
Q ss_pred HHCCCCccEEEeCCC-----h--hhHHHHHHhhhcCCeEEEEccc
Q 019012 222 RCFPQGIDIYFDNVG-----G--EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 222 ~~~~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.+.++.||+|+-+.+ . ..+++..+.|+++|+++.....
T Consensus 140 p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 140 PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 011236999976443 1 3688999999999999888654
|
|
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.41 Score=43.33 Aligned_cols=96 Identities=19% Similarity=0.248 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCC-eee-----ecCCHHHHHHHHHHHCCCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD-EAF-----NYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~-~vi-----~~~~~~~~~~~i~~~~~g~~d 229 (347)
..++|||+|+ +-|..+.++++..+. +|++++.+++-.+.+++-++.. ..+ ...-. |....+++ ..+.+|
T Consensus 103 ~pk~VLiiGg--G~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~-Da~~~L~~-~~~~yD 178 (336)
T PLN02823 103 NPKTVFIMGG--GEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIN-DARAELEK-RDEKFD 178 (336)
T ss_pred CCCEEEEECC--CchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEC-hhHHHHhh-CCCCcc
Confidence 4578999994 556667778887665 8999999999888888444321 011 11111 44445543 344799
Q ss_pred EEE-eCCC----h--------hhHH-HHHHhhhcCCeEEEE
Q 019012 230 IYF-DNVG----G--------EMLD-AALLNMRDHGRIAVC 256 (347)
Q Consensus 230 ~vi-d~~g----~--------~~~~-~~~~~l~~~G~~v~~ 256 (347)
++| |... + +.++ .+.+.|+++|.++.-
T Consensus 179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred EEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 986 4321 1 2455 678899999998764
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.075 Score=48.30 Aligned_cols=77 Identities=14% Similarity=0.153 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-----HHHHHHH---cC--CC-eeeecCCHHHHHHHHHHHCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-----VDLLKNK---LG--FD-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-----~~~~~~~---~g--~~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
++.+|||+||+|.+|...++.+...|.+|++++++... .+.+.+. .+ +. ...|..+...+...++..
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-- 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc--
Confidence 46789999999999999999999999999998875432 2222100 01 11 123554432333334321
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
.+|+||.+.+
T Consensus 83 -~~d~Vih~A~ 92 (340)
T PLN02653 83 -KPDEVYNLAA 92 (340)
T ss_pred -CCCEEEECCc
Confidence 4899999886
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.44 Score=37.89 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
++++|.|+|- |+-|.+..+-+|-.|.+|++..++.+ ..+.++ +-|.. +. +..+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~-~~Gf~-v~------~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAK-ADGFE-VM------SVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHH-HTT-E-CC------EHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHH-HCCCe-ec------cHHHHHh-----hCCEEEEeC
Confidence 4789999995 99999999999999999999988776 677787 88873 33 3344454 389999888
Q ss_pred Chh----hH-HHHHHhhhcCCeEEEEc
Q 019012 236 GGE----ML-DAALLNMRDHGRIAVCG 257 (347)
Q Consensus 236 g~~----~~-~~~~~~l~~~G~~v~~g 257 (347)
..+ .+ +.....|+++-.+++..
T Consensus 69 PD~~q~~vy~~~I~p~l~~G~~L~fah 95 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPGATLVFAH 95 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT-EEEESS
T ss_pred ChHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence 764 33 44455777777766654
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.2 Score=46.43 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcC-------CCe-eeecCCHHHHHHHHHHHCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLG-------FDE-AFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g-------~~~-vi~~~~~~~~~~~i~~~~~g 226 (347)
.+..+|||+||+|-+|...++.+... |.+|++++++.++...+. ..+ +.. ..|..+... +.+...
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~~~----l~~~~~- 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHDSR----LEGLIK- 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCChHH----HHHHhh-
Confidence 34468999999999999988888877 589999998766555443 322 111 123333212 222222
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|+||.+++
T Consensus 86 ~~d~ViHlAa 95 (386)
T PLN02427 86 MADLTINLAA 95 (386)
T ss_pred cCCEEEEccc
Confidence 4899999886
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.22 Score=44.77 Aligned_cols=88 Identities=23% Similarity=0.157 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|+++-|+| .|.+|++.++.++..|.+|+..+++.. .+..+ ..++..+ ++.+.+++ .|++.-..
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHC 208 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeC
Confidence 3588999999 599999999999999999999998765 22223 4444322 22333333 67776554
Q ss_pred Ch--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. + .-...+..|++++.+|.++-
T Consensus 209 Plt~~T~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence 42 1 12466777778877777653
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.19 Score=45.85 Aligned_cols=94 Identities=19% Similarity=0.159 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-----Ceeee--cCCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-----DEAFN--YNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-----~~vi~--~~~~~~~~~~i~~~~~g~~ 228 (347)
-.|+++.|+|- |.+|..+++.++.+|++|++.+++..+.. .. .++. ....+ .... ++.+.+++ .
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~L~ell~~-----a 227 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEP-ED-GLLIPNGDVDDLVDEKGGHE-DIYEFAGE-----A 227 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhh-hh-hhccccccccccccccCccc-CHHHHHhh-----C
Confidence 35789999994 99999999999999999999987633211 11 1110 00000 0111 33333433 7
Q ss_pred cEEEeCCCh--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 229 DIYFDNVGG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 229 d~vid~~g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+|+-+... + .-...+..|+++..+|.++-
T Consensus 228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 888877652 1 22566777888877777753
|
|
| >COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.69 E-value=1.4 Score=38.88 Aligned_cols=57 Identities=25% Similarity=0.318 Sum_probs=45.0
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---ChHhHHHHHHHcCCCeeee
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---SSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~ 209 (347)
..+.+++|. .+|-+-+|.+|.+.+.+|+..|.+++.+.. |.+|.+.++ .+|+..++.
T Consensus 55 ~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVILT 114 (300)
T ss_pred HcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEc
Confidence 446689998 667777899999999999999998777654 557888888 999864443
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.31 Score=42.83 Aligned_cols=77 Identities=22% Similarity=0.205 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|++++|.|.+..+|.-...++...|++|+++.+... ++.+.++ .+|+|+-++
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l~~~~~-----~ADIVV~av 209 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DLAAHTR-----QADIVVAAV 209 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CHHHHhh-----hCCEEEEcC
Confidence 47999999998777899999999999999998643211 2333333 389999999
Q ss_pred ChhhHHHHHHhhhcCCeEEEEccc
Q 019012 236 GGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 236 g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
|...+-. -++++++-.++.+|..
T Consensus 210 G~~~~i~-~~~ik~gavVIDVGin 232 (285)
T PRK14189 210 GKRNVLT-ADMVKPGATVIDVGMN 232 (285)
T ss_pred CCcCccC-HHHcCCCCEEEEcccc
Confidence 9754322 2889999999999864
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.65 E-value=1 Score=39.97 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=34.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
.+|.|+|+ |.+|...++.+...|.+|++.+.++++.+.++
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 47899996 99999988888888999999999988766664
|
|
| >KOG3201 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.12 Score=40.77 Aligned_cols=161 Identities=12% Similarity=-0.013 Sum_probs=88.9
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHH------cCCCeee
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK------LGFDEAF 208 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~------~g~~~vi 208 (347)
+.+|..=+-||+.|.+ .+.-.|.+||=+|| |-+|++-+.+|...-- .|.+|+.+++..+-+++- .+.+.+.
T Consensus 9 ciwpseeala~~~l~~-~n~~rg~~ilelgg-gft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~ 86 (201)
T KOG3201|consen 9 CIWPSEEALAWTILRD-PNKIRGRRILELGG-GFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCC 86 (201)
T ss_pred EecccHHHHHHHHHhc-hhHHhHHHHHHhcC-chhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceeh
Confidence 3444445667778755 33345788999997 9999999999987755 899999988765555411 1111110
Q ss_pred ecCCHHHHHHHHHHHCCCCccEEE--eCCCh-----hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcce
Q 019012 209 NYNDETDLVAALKRCFPQGIDIYF--DNVGG-----EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRI 281 (347)
Q Consensus 209 ~~~~~~~~~~~i~~~~~g~~d~vi--d~~g~-----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 281 (347)
.-+-. .+..+..+. ...||+++ ||+-- +..+..+..|+|.|+-..+...- ......+.+.+
T Consensus 87 vlrw~-~~~aqsq~e-q~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsPRR----------g~sL~kF~de~ 154 (201)
T KOG3201|consen 87 VLRWL-IWGAQSQQE-QHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSPRR----------GQSLQKFLDEV 154 (201)
T ss_pred hhHHH-HhhhHHHHh-hCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecCcc----------cchHHHHHHHH
Confidence 00000 111111111 12699987 55542 24556677899999977664322 22233333444
Q ss_pred EeeccccccccchhHHHHHHHHHHHHCCc
Q 019012 282 TMKGFLQSDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
.-.|+...-.+..-...++...++.+.+.
T Consensus 155 ~~~gf~v~l~enyde~iwqrh~~Lkk~~e 183 (201)
T KOG3201|consen 155 GTVGFTVCLEENYDEAIWQRHGRLKKGDE 183 (201)
T ss_pred HhceeEEEecccHhHHHHHHHHHHhcCCC
Confidence 33343332222222445566666665554
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.2 Score=47.69 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCchHHHH-HHHHHHHCCC-EEEEEECChHhHHHHHHHc----CCC----eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQL-VGQLAKLHGC-YVVGSAGSSQKVDLLKNKL----GFD----EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~-ai~la~~~G~-~V~~~~~~~~~~~~~~~~~----g~~----~vi~~~~~~~~~~~i~~~~~ 225 (347)
-.|++|||+||+|++|.. +-|+++. +. +++..++++.+...+++++ +.. .+-|.++. + .+.+...
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~-~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~-~---~~~~~~~ 322 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKF-NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR-D---RVERAME 322 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhc-CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH-H---HHHHHHh
Confidence 468999999999999965 4455555 66 8999999998765554333 322 12344443 2 2333333
Q ss_pred C-CccEEEeCCCh
Q 019012 226 Q-GIDIYFDNVGG 237 (347)
Q Consensus 226 g-~~d~vid~~g~ 237 (347)
+ ++|+||.++.-
T Consensus 323 ~~kvd~VfHAAA~ 335 (588)
T COG1086 323 GHKVDIVFHAAAL 335 (588)
T ss_pred cCCCceEEEhhhh
Confidence 5 79999998873
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.14 Score=39.25 Aligned_cols=80 Identities=16% Similarity=0.206 Sum_probs=51.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
-+|-|+|+ |.+|......++..|.+|..+. ++.+..+++.+.++...+.+..+ .. ..+|++|=++..
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----------~~-~~aDlv~iavpD 78 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----------IL-RDADLVFIAVPD 78 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----------GG-CC-SEEEE-S-C
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----------cc-ccCCEEEEEech
Confidence 47899996 9999999999999999988775 44445566653444433332221 11 258999999999
Q ss_pred hhHHHHHHhhhcC
Q 019012 238 EMLDAALLNMRDH 250 (347)
Q Consensus 238 ~~~~~~~~~l~~~ 250 (347)
+.+......|...
T Consensus 79 daI~~va~~La~~ 91 (127)
T PF10727_consen 79 DAIAEVAEQLAQY 91 (127)
T ss_dssp CHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHh
Confidence 8888888888765
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.23 Score=42.42 Aligned_cols=76 Identities=17% Similarity=0.152 Sum_probs=46.9
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
+||+||+|++|...++.+...|++|++++++. ++.+.+.+ +.+.. ..+|..+.+++...+.+.. .+..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999988999998888653 33332221 22321 1245444423333333221 1367888
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88776
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.34 Score=42.55 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC------CeeeecCCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF------DEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
..+++||++|+ +.|..+..+++.... ++++++.+++-.+.+++.+.. +.-++.... +..+.+++. .+.+
T Consensus 71 ~~p~~VL~iG~--G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~~-~~~y 146 (270)
T TIGR00417 71 PNPKHVLVIGG--GDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLADT-ENTF 146 (270)
T ss_pred CCCCEEEEEcC--CchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHhC-CCCc
Confidence 34569999995 335566677776644 899999988876777632211 000111111 333334432 3479
Q ss_pred cEEEe-CC---C-------hhhHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYFD-NV---G-------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vid-~~---g-------~~~~~~~~~~l~~~G~~v~~g 257 (347)
|+|+- .. + .+.++.+.+.|+++|.++...
T Consensus 147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 99874 32 1 134678889999999998763
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.094 Score=52.10 Aligned_cols=76 Identities=21% Similarity=0.240 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH---------------------hHHHHHHHcCCCeeeecCCHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ---------------------KVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
.+++|+|+|+ |+.|+.++..++..|.+|++....+. +.+.++ ++|++..++..-..+
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~-~~Gv~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFT-AMGIDFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHH-HCCeEEEcCCccCCc
Confidence 4899999996 99999999999999999999987652 445666 778764444321101
Q ss_pred HHHHHHHHCCCCccEEEeCCCh
Q 019012 216 LVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g~ 237 (347)
. .+.++. .++|.||.++|.
T Consensus 387 ~--~~~~l~-~~~DaV~latGa 405 (639)
T PRK12809 387 I--TFSDLT-SEYDAVFIGVGT 405 (639)
T ss_pred C--CHHHHH-hcCCEEEEeCCC
Confidence 0 111221 258999999985
|
|
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=94.58 E-value=1.4 Score=38.16 Aligned_cols=34 Identities=29% Similarity=0.276 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
-+|.+|+|.| .|.+|+.+++++...|++|++++.
T Consensus 36 l~g~~vaIqG-fGnVG~~~a~~L~e~GakvvaVsD 69 (254)
T cd05313 36 LKGKRVAISG-SGNVAQYAAEKLLELGAKVVTLSD 69 (254)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4688999999 599999999999999999997775
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.41 Score=42.75 Aligned_cols=88 Identities=18% Similarity=0.207 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|++|.|+| .|.+|.+.++.++..|.+|++..++....+.+. ..|+. +. ++.+.++ ..|+|+-+.
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~-~~G~~-v~------sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAK-ADGFE-VM------SVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHH-HcCCE-EC------CHHHHHh-----cCCEEEEeC
Confidence 4688999999 599999999999999999998876655545555 66763 22 2333333 378998877
Q ss_pred Chh----hH-HHHHHhhhcCCeEEEEc
Q 019012 236 GGE----ML-DAALLNMRDHGRIAVCG 257 (347)
Q Consensus 236 g~~----~~-~~~~~~l~~~G~~v~~g 257 (347)
..+ .+ ...+..|+++..+++..
T Consensus 80 Pd~~t~~V~~~eil~~MK~GaiL~f~h 106 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREGQMLLFSH 106 (335)
T ss_pred CChHHHHHHHHHHHhcCCCCCEEEECC
Confidence 642 22 35677788877665544
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.5 Score=43.92 Aligned_cols=96 Identities=14% Similarity=0.138 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe--eee-cC-CHHHHHHHHHHHCCC-CccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE--AFN-YN-DETDLVAALKRCFPQ-GIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~-~~-~~~~~~~~i~~~~~g-~~d~v 231 (347)
...+|||+|+..+.|+..+..++..|.+|++++..+....... ..+++ .+. ++ +++.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s--~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS--RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999999888999999999999999999998765433221 12222 221 11 112466666665555 79999
Q ss_pred EeCCChh-hHHHHHHhhhcCCeEE
Q 019012 232 FDNVGGE-MLDAALLNMRDHGRIA 254 (347)
Q Consensus 232 id~~g~~-~~~~~~~~l~~~G~~v 254 (347)
|-+.... .+....+.++++.++.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~~~v~ 104 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAYCEVL 104 (389)
T ss_pred EECChHHHhHHhhhhhhcCCcEEE
Confidence 9877643 2333344565554443
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.075 Score=45.84 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=46.0
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
|+|+||+|-+|.+.++.++..|.+|++.++++.+.+.-. ..... . .+.+.+....++|+||+-+|.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-~~~v~----~------~~~~~~~~~~~~DavINLAG~ 66 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-HPNVT----L------WEGLADALTLGIDAVINLAGE 66 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-Ccccc----c------cchhhhcccCCCCEEEECCCC
Confidence 689999999999999999999999999999887644332 11111 1 111222222269999998884
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 347 | ||||
| 4hfj_A | 351 | X-ray Crystal Structure Of A Double Bond Reductase | 1e-132 | ||
| 2j3h_A | 345 | Crystal Structure Of Arabidopsis Thaliana Double Bo | 1e-118 | ||
| 4b7c_A | 336 | Crystal Structure Of Hypothetical Protein Pa1648 Fr | 1e-60 | ||
| 1v3t_A | 333 | Crystal Structure Of Leukotriene B4 12- Hydroxydehy | 4e-59 | ||
| 1zsv_A | 349 | Crystal Structure Of Human Nadp-Dependent Leukotrie | 1e-53 | ||
| 2y05_A | 328 | Crystal Structure Of Human Leukotriene B4 12-Hydrox | 1e-53 | ||
| 2w4q_A | 357 | Crystal Structure Of Human Zinc-Binding Alcohol Deh | 3e-44 | ||
| 2zb4_A | 357 | Crystal Structure Of Human 15-Ketoprostaglandin Del | 3e-44 | ||
| 2zb3_A | 353 | Crystal Structure Of Mouse 15-Ketoprostaglandin Del | 3e-42 | ||
| 1vj1_A | 363 | Crystal Structure Of Putative Nadph-Dependent Oxido | 2e-36 | ||
| 2x7h_A | 370 | Crystal Structure Of The Human Mgc45594 Gene Produc | 4e-23 | ||
| 2c0c_A | 362 | Structure Of The Mgc45594 Gene Product Length = 362 | 4e-23 | ||
| 2wek_A | 341 | Crystal Structure Of The Human Mgc45594 Gene Produc | 6e-23 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 9e-12 | ||
| 1yb5_A | 351 | Crystal Structure Of Human Zeta-crystallin With Bou | 3e-11 | ||
| 1wly_A | 333 | Crystal Structure Of 2-haloacrylate Reductase Lengt | 4e-11 | ||
| 1xa0_A | 328 | Crystal Structure Of Mcsg Target Apc35536 From Baci | 3e-08 | ||
| 4dup_A | 353 | Crystal Structure Of A Quinone Oxidoreductase From | 3e-08 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 1e-07 | ||
| 2oby_A | 338 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 2e-07 | ||
| 2j8z_A | 354 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 2e-07 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 1e-06 | ||
| 3tqh_A | 321 | Structure Of The Quinone Oxidoreductase From Coxiel | 2e-06 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 3e-06 | ||
| 1tt7_A | 330 | Crystal Structure Of Bacillus Subtilis Protein Yhfp | 4e-06 | ||
| 4a27_A | 349 | Crystal Structure Of Human Synaptic Vesicle Membran | 7e-06 | ||
| 1qor_A | 327 | Crystal Structure Of Escherichia Coli Quinone Oxido | 2e-05 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 2e-04 | ||
| 1zsy_A | 357 | The Structure Of Human Mitochondrial 2-Enoyl Thioes | 3e-04 | ||
| 2vcy_A | 344 | Crystal Structure Of 2-Enoyl Thioester Reductase Of | 3e-04 | ||
| 3slk_A | 795 | Structure Of Ketoreductase And Enoylreductase Didom | 4e-04 | ||
| 3nx4_A | 324 | Crystal Structure Of The Yhdh Oxidoreductase From S | 6e-04 | ||
| 1pqw_A | 198 | Putative Enoyl Reductase Domain Of Polyketide Synth | 7e-04 |
| >pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351 | Back alignment and structure |
|
| >pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345 | Back alignment and structure |
|
| >pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336 | Back alignment and structure |
|
| >pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333 | Back alignment and structure |
|
| >pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349 | Back alignment and structure |
|
| >pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328 | Back alignment and structure |
|
| >pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357 | Back alignment and structure |
|
| >pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357 | Back alignment and structure |
|
| >pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353 | Back alignment and structure |
|
| >pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363 | Back alignment and structure |
|
| >pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370 | Back alignment and structure |
|
| >pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362 | Back alignment and structure |
|
| >pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
| >pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351 | Back alignment and structure |
|
| >pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333 | Back alignment and structure |
|
| >pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328 | Back alignment and structure |
|
| >pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338 | Back alignment and structure |
|
| >pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330 | Back alignment and structure |
|
| >pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349 | Back alignment and structure |
|
| >pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357 | Back alignment and structure |
|
| >pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344 | Back alignment and structure |
|
| >pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795 | Back alignment and structure |
|
| >pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324 | Back alignment and structure |
|
| >pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345 | Back alignment and structure |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 203/346 (58%), Positives = 263/346 (76%), Gaps = 6/346 (1%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMR- 63
NKQVI + Y+ G P E+D + + ++L+ P+G+ + LVKNLYLSCDPYMR RM
Sbjct: 3 ATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT--NSVLVKNLYLSCDPYMRIRMGK 60
Query: 64 -SSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIR-KTEQLR 121
T++ + PGQP++G+GVS++++S +P++K GDL+ G+ WEEYS+I T
Sbjct: 61 PDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHF 120
Query: 122 KIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH 181
KIQ +PLSY+ GLLGMPG TAYAGF+EVCSPK GE V+VSAASGAVGQLVGQLAK+
Sbjct: 121 KIQHTD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMM 179
Query: 182 GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241
GCYVVGSAGS +KVDLLK K GFD+AFNY +E+DL AALKRCFP GIDIYF+NVGG+MLD
Sbjct: 180 GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLD 239
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDY 301
A L+NM HGRIAVCGM+S ++ + +G+HNL ++ KR ++GF+ SD+ Y +FL++
Sbjct: 240 AVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEF 299
Query: 302 VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347
V+ + ++GKI YVED+ +GLE AP A VGLF GKNVGKQVV VA E
Sbjct: 300 VLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333 | Back alignment and structure |
|---|
Score = 478 bits (1234), Expect = e-171
Identities = 132/345 (38%), Positives = 194/345 (56%), Gaps = 24/345 (6%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + +G P ++D E+K +L K +G L++ L+LS DPYMR
Sbjct: 6 VKAKSWTLKKHFQGKPTQSDFELKTV--ELPPLK---NGEVLLEALFLSVDPYMRIAS-- 58
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
G + G V++VV+S N F G +V +GW + + + L K+
Sbjct: 59 -------KRLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFIS-DGKGLEKLL 110
Query: 125 PDHH--IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
+ +PLS +G +GMPG TAY G EVC K GE V VSAA+GAVG +VGQ+AKL G
Sbjct: 111 TEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKG 170
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
C VVG+AGS +K+ LK ++GFD AFNY L ALK+ P G D YFDNVGGE L+
Sbjct: 171 CKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNT 229
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHD---PQGIHNLFTLVTKRITMKGFLQSDYL-HLYPRF 298
L M+D G+IA+CG +S Y+ + +++ K++ ++GF+ + + +
Sbjct: 230 VLSQMKDFGKIAICGAIS--VYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKA 287
Query: 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
L ++ +GKI Y E + +G EN PAAF+ + +G N+GK VV
Sbjct: 288 LRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 472 bits (1217), Expect = e-168
Identities = 111/352 (31%), Positives = 174/352 (49%), Gaps = 17/352 (4%)
Query: 5 VENKQVIF--RGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM 62
+ ++V+ R G P + ++ ++ P + G V+ LYLS DPYMR RM
Sbjct: 7 MIVQRVVLNSRPGKNGNPVAENFRME----EVYLPDNINEGQVQVRTLYLSVDPYMRCRM 62
Query: 63 RSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT-GWEEYSLIRKTEQLR 121
+ YI P+ Q V+G G+ + +S + N GD V W+ ++ L
Sbjct: 63 NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVIL-DGNSLE 121
Query: 122 KIQPDH-HIPLSYHIGLLGMPGFTAYAGFHEVCSPKSG--EYVFVSAASGAVGQLVGQLA 178
K+ P LSY +G +GMPG T+ G E +G + + VS A+GA G + GQ+
Sbjct: 122 KVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIG 181
Query: 179 KLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237
GC VVG G+ +K LL ++LGFD A NY + ++ L+ P G+D+YFDNVGG
Sbjct: 182 HFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGG 240
Query: 238 EMLDAALLNMRDHGRIAVCGMVSL----HSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293
+ D + M ++ I +CG +S Y P + IT + FL +Y
Sbjct: 241 NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKD 300
Query: 294 LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345
+ + + +K+GK+ E + GLEN AAF + +G N+GKQ+V ++
Sbjct: 301 KFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCIS 352
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 314 bits (807), Expect = e-106
Identities = 88/319 (27%), Positives = 143/319 (44%), Gaps = 27/319 (8%)
Query: 43 GAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV 102
G LV+N ++ + + S PPF G G V + S + + G V
Sbjct: 54 GDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIG-EVVALGLSASARYTVGQAV 112
Query: 103 AGLT--GWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEY 160
A + + EY+++ + P ++ L + G TAY E+ G+
Sbjct: 113 AYMAPGSFAEYTVV-PASIATPV-PSV---KPEYLTL-LVSGTTAYISLKELGGLSEGKK 166
Query: 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220
V V+AA+G GQ QL+K C+V+G+ S +K LK LG D NY E + L
Sbjct: 167 VLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVL 224
Query: 221 KRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH------NLF 274
K+ +P+G+D+ +++VGG M D A+ + GR+ V G +S Y P G+
Sbjct: 225 KQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFIS--GYQTPTGLSPVKAGTLPA 282
Query: 275 TLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMN--------EGLENAPA 326
L+ K +++GF + YL Y + +++ G +V D+ GLE+
Sbjct: 283 KLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFR 342
Query: 327 AFVGLFSGKNVGKQVVRVA 345
A ++ GKN GK VV +
Sbjct: 343 AVNYMYMGKNTGKIVVELP 361
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-35
Identities = 56/285 (19%), Positives = 96/285 (33%), Gaps = 28/285 (9%)
Query: 72 PPFVPGQPVEGFG-VSKVVDSDNPNFKPGDLVAGLT------GWEEYSLIRKTEQLRKIQ 124
G EG G + D G VA T W EY++ + +
Sbjct: 79 KGRPAG--FEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVA-EAAACIPL- 134
Query: 125 PDHHIPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183
D + G + + TA A F V + + ++A + + +L+ LAK G
Sbjct: 135 LDT---VRDEDGAAMIVNPLTAIAMFDIV-KQEGEKAFVMTAGASQLCKLIIGLAKEEGF 190
Query: 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDA 242
+ + +++ LLK +G N D A L+ + I+ D V G + A
Sbjct: 191 RPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKAEQPRIFLDAVTGPLASA 248
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP----RF 298
M R + G + D I L+ + ++GF S+++ +
Sbjct: 249 IFNAMPKRARWIIYGRLDP----DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPA 304
Query: 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
+ + G+ L A A V K GK +R
Sbjct: 305 ILEAQKRFSDGRWSTDVTAVVPLAEAIAW-VPAELTKPNGKVFIR 348
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-35
Identities = 52/288 (18%), Positives = 100/288 (34%), Gaps = 29/288 (10%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT----GWEEYSLIRKTEQLRKIQPDH 127
P V G EG V S+ KPGD V W ++ E L ++ P
Sbjct: 84 LPAVGG--NEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVF-SEEALIQV-PSD 139
Query: 128 HIPLSYHIG-LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVV 186
+ LG+ TAY + + G+ V +A++ VGQ V Q+A G +
Sbjct: 140 ---IPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTI 196
Query: 187 GSAGSSQKVDLLKN---KLGFDEAFNYNDE--TDLVAALKRCFPQGIDIYFDNVGGEMLD 241
+ L + LG + + ++ K + + VGG+
Sbjct: 197 NVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKD--MPQPRLALNCVGGKSST 254
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP----- 296
L + G + G ++ P ++ L+ K + ++GF S + +
Sbjct: 255 ELLRQLARGGTMVTYGGMA----KQPVVA-SVSLLIFKDLKLRGFWLSQWKKDHSPDQFK 309
Query: 297 RFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
+ + ++G++ L++ +A KQ++ +
Sbjct: 310 ELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 8e-33
Identities = 53/308 (17%), Positives = 106/308 (34%), Gaps = 36/308 (11%)
Query: 63 RSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT----GWEEYSLIRKTE 118
+++ + P G EG V S+ + + GD V W ++L +
Sbjct: 63 KTTGFGTTEPAAPCG--NEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD 120
Query: 119 QLRKIQPDHHIPLSYHIGL-------LGMPGFTAYAGFHEVCSPKSGEYVFV-SAASGAV 170
++ P GL + + TAY G+ F+ + + AV
Sbjct: 121 FIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAV 180
Query: 171 GQLVGQLAKLHGCYVVGSAGSS----QKVDLLKNKLGFDEAFNYNDE--TDLVAALK--- 221
G+ Q+ KL + + V LK +LG + + + +K
Sbjct: 181 GKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSREFGPTIKEWI 239
Query: 222 RCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRI 281
+ + + VGG+ + ++G + G +S P I + K
Sbjct: 240 KQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS----FQPVTI-PTSLYIFKNF 294
Query: 282 TMKGFLQSDYLHLYP----RFLDYVISNYKQGKIVYVEDMN---EGLENAPAAFVGLFSG 334
T GF ++ L L+ +I+ Y++GK+ + + +G + + +
Sbjct: 295 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVAN 354
Query: 335 KNVGKQVV 342
GKQ++
Sbjct: 355 SKDGKQLI 362
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 7e-31
Identities = 71/294 (24%), Positives = 107/294 (36%), Gaps = 32/294 (10%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQPDHH 128
P VPG E G+ + + ++ GD V W E E + KI PD
Sbjct: 60 TPLVPG--FECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTP-VEFVYKI-PDD- 114
Query: 129 IPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
+S+ M TAY EV + + G V V +A G VGQ V QL V
Sbjct: 115 --MSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF 172
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNM 247
S+ K + +K+ F+ D V +KR +G+DI D + G+ L +
Sbjct: 173 GTASTFKHEAIKD--SVTHLFDR--NADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLL 228
Query: 248 RDHGRIAVCGMVSLHSYHDPQGIH-----------NLFTLVTKRITMKGF----LQSDYL 292
+ G + G ++ + N L + + GF L
Sbjct: 229 KPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQG 288
Query: 293 --HLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
L ++ +I Y Q KI V D LE A + N+GK ++ V
Sbjct: 289 RAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 342
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-30
Identities = 66/283 (23%), Positives = 114/283 (40%), Gaps = 23/283 (8%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT--GWEEYSLIRKTEQLRKIQPDHHI 129
P+V G E G NF+ GD VA ++ + +YS I + K+ P
Sbjct: 63 KPYVLG--REASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKL-PKG-- 117
Query: 130 PLSYHIGLLG----MPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYV 185
S L + TA + +E K G+YV + AA+G VG ++ QL K+ G +
Sbjct: 118 -TSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHT 176
Query: 186 VGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGGEMLDAAL 244
+ A + +K+ + K + G + N + E D++ + + +G+D FD+VG + + +L
Sbjct: 177 IAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISL 234
Query: 245 LNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDY--- 301
++ G G S ++ L K IT+ Y+ + Y
Sbjct: 235 AALKRKGVFVSFGNAS-----GLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDE 289
Query: 302 VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
K+ L + A + S K VGK V+ +
Sbjct: 290 FFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEI 332
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-30
Identities = 60/280 (21%), Positives = 99/280 (35%), Gaps = 26/280 (9%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQPDHH 128
PPFVPG +E GV + + KPGD V G+ E + + P
Sbjct: 78 PPFVPG--IETAGVVRSAP-EGSGIKPGDRVMAFNFIGGYAERVAV-APSNILPT-PPQ- 131
Query: 129 IPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
L + L T Y + ++GE V V A+G +G Q+AK G V+
Sbjct: 132 --LDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIA 189
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAALLN 246
+ + +K +G D + A++ G+D+ D +GG D A+
Sbjct: 190 VVNRTAATEFVK-SVGADIVLPLEE--GWAKAVREATGGAGVDMVVDPIGGPAFDDAVRT 246
Query: 247 MRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP----RFLDYV 302
+ GR+ V G + + L+ + ++ G ++L + +
Sbjct: 247 LASEGRLLVVGFAA-----GGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGL 301
Query: 303 ISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
+G V L A GK GK V+
Sbjct: 302 EKLVAEGMRPPV-SARIPLSEGRQALQDFADGKVYGKMVL 340
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 5e-30
Identities = 53/288 (18%), Positives = 108/288 (37%), Gaps = 35/288 (12%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLS 132
P +PG EG G+ + V + G V L G + + K D +P+
Sbjct: 63 PNIPG--YEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQ------EYVKTSADFVVPIP 114
Query: 133 YHIGL-----LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
I + + TA+ E + + + + V+A A+G L QL+++ ++
Sbjct: 115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIA 174
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAALLN 246
+++ + L +LG + + L + G D D++GG + +
Sbjct: 175 VTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFS 232
Query: 247 MRDHGRIAVCGMVSLHSYHDPQGIH-NLFTLVTK-RITMKGFLQSDYLHLYPR-----FL 299
+R +G G++S GI N +VTK ++ F +
Sbjct: 233 LRPNGHFLTIGLLS--------GIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETF 284
Query: 300 DYVISNYKQGKIVYVEDMNE--GLENAPAAFVGLFSG-KNVGKQVVRV 344
++I + ++ +++ ++ L + AA + S K GK +
Sbjct: 285 RHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTS 331
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-29
Identities = 69/300 (23%), Positives = 115/300 (38%), Gaps = 50/300 (16%)
Query: 70 YIPP----FVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRK 122
Y PP + G +E G V + GD V GL + EY L+ + L
Sbjct: 79 YPPPKDASPILG--LELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPF 136
Query: 123 IQPDHH-------IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVG 175
P + +P ++ FT +A ++ GE V + + +G
Sbjct: 137 --PKGYDAVKAAALPETF---------FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAI 185
Query: 176 QLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235
QLA+ G V +AGS+ K + + +LG NY E D A +K QG+DI D +
Sbjct: 186 QLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMI 243
Query: 236 GGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLY 295
G + + ++ G +++ + + + NL ++ KR+T+ G +
Sbjct: 244 GAAYFERNIASLAKDGCLSIIAFL---GGAVAEKV-NLSPIMVKRLTVTGS------TMR 293
Query: 296 PR-----------FLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
PR L V + G + V E+ A L G +VGK ++ V
Sbjct: 294 PRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-28
Identities = 61/301 (20%), Positives = 111/301 (36%), Gaps = 57/301 (18%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQPDHH- 128
+ G G V+++ ++K GD L G +Y + + + P+
Sbjct: 80 SNILGLEASG-HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPI--PEGLT 136
Query: 129 ------IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
IP ++ TA+ H V + ++G+YV + A VG QL ++ G
Sbjct: 137 LTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG 187
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGGEMLD 241
+ +AGS +K+ + + KLG FNY E D A + G+++ D +GG +
Sbjct: 188 AIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWE 245
Query: 242 AALLNMRDHGRIAVCGMVSLHSYHDPQG----IHNLFTLVTKRITMKGFLQSDYLHLYPR 297
+ + GR + G++ G L+ KR ++ L R
Sbjct: 246 KNVNCLALDGRWVLYGLMG--------GGDINGPLFSKLLFKRGSLITS------LLRSR 291
Query: 298 FLDY--------------VISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
Y S +++ V D + A + + KN+GK V+
Sbjct: 292 DNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLE 351
Query: 344 V 344
+
Sbjct: 352 L 352
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 7e-28
Identities = 71/301 (23%), Positives = 107/301 (35%), Gaps = 43/301 (14%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLS 132
P V G +G GV V F PGD V G R + P + I
Sbjct: 58 PHVLG--ADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE 115
Query: 133 YHIG------------LLGMP--------------GFTAYAGFHEVCSPKSGEYVFVSAA 166
+ G L P TA+ + + G+ V V AA
Sbjct: 116 HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAA 175
Query: 167 SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP- 225
V Q+AKL G V+ +AGS K+ K LG DE NY D ++R
Sbjct: 176 GSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHP-DWPKEVRRLTGG 233
Query: 226 QGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285
+G D D+ G + + + GRIA+ G S +G + +++++ G
Sbjct: 234 KGADKVVDHTGALYFEGVIKATANGGRIAIAGASS-----GYEGTLPFAHVFYRQLSILG 288
Query: 286 -FLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
+ S L ++ ++GK+ V LE A L + GK V++V
Sbjct: 289 STMAS------KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342
Query: 345 A 345
Sbjct: 343 G 343
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-27
Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 15/194 (7%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA----GLTGWEEYSLIRKTEQLRKIQPDHH 128
P G EG GV + V + FK GD VA L + E ++ L K+ D
Sbjct: 58 PSGLG--AEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVL-PEANLVKL-ADS- 112
Query: 129 IPLSYHIGLLGM-PGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
+S+ M G T + K GE + AA+G VG L Q AK G ++G
Sbjct: 113 --VSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIG 170
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGEMLDAALLN 246
+ S +K K LG E +Y+ E D+ + + + +D VG + +L +
Sbjct: 171 TVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDS 228
Query: 247 MRDHGRIAVCGMVS 260
+ G + G S
Sbjct: 229 VAPRGLVVSFGNAS 242
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-27
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 38/287 (13%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA-GLT---GWEEYSLIRKTEQLRKIQPDHH 128
P+ PG + GV + V + FK GD V T G+ EY+L + K+ P+
Sbjct: 88 PYTPG--SDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALA-ADHTVYKL-PEK- 142
Query: 129 IPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
L + G +G+P FTAY K+GE V V ASG VG Q+A+ +G ++G
Sbjct: 143 --LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILG 200
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAALLN 246
+AG+ + ++ + G E FN+ + + + +K+ +GIDI + + L L
Sbjct: 201 TAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 258
Query: 247 MRDHGRIAVCGMVSLHSYHDPQGIH-NLFTLVTKRITMKGFLQSDYLHLYPR-------F 298
+ GR+ V G I N + K ++ G + L+ +
Sbjct: 259 LSHGGRVIVVGSRG--------TIEINPRDTMAKESSIIG------VTLFSSTKEEFQQY 304
Query: 299 LDYVISNYKQGKIVYVEDMNEGLENAPAAF-VGLFSGKNVGKQVVRV 344
+ + + G + V LE A + GK ++ +
Sbjct: 305 AAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-27
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE----EYSLIRKTEQLRKIQPDH 127
PP V G E V + V +F G+ V + L E+L K+ P
Sbjct: 60 PPIVVG--FEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLY-PAEKLIKV-PKD 115
Query: 128 HIPLSYHIGLLG---MPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY 184
L L + G TA H+ K G+YV + AA+G +G ++ A+ G
Sbjct: 116 ---LDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT 172
Query: 185 VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGEMLDAA 243
V+G+ + +K + + KLG NY+ + D ++ +G+D+ +D++G + L +
Sbjct: 173 VIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKS 230
Query: 244 LLNMRDHGRIAVCGMVS 260
L +R G A G S
Sbjct: 231 LDCLRPRGMCAAYGHAS 247
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 6e-27
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 15/195 (7%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVA----GLTGWEEYSLIRKTEQLRKIQPDH 127
P G E G+ V S + K GD V L + I ++ + P
Sbjct: 57 LPSGLGT--EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNI-IADKAAIL-PAA 112
Query: 128 HIPLSYHIGLLGM-PGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVV 186
+S+ G T Y + K E AA+G VG + Q AK G ++
Sbjct: 113 ---ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLI 169
Query: 187 GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGEMLDAALL 245
G+ G++QK K G + NY +E DLV LK + + + +D+VG + + +L
Sbjct: 170 GTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLD 227
Query: 246 NMRDHGRIAVCGMVS 260
++ G + G S
Sbjct: 228 CLQRRGLMVSFGNSS 242
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 4e-25
Identities = 60/294 (20%), Positives = 109/294 (37%), Gaps = 40/294 (13%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE--------EYSLIRKTEQLRKI 123
P + G ++ G V + +F+ GD V GLTG +++ + K
Sbjct: 63 LPAILG--MDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK- 119
Query: 124 QPDHHIPLSY-HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG 182
P L+ +L + TA+ G + + G+ V + G VG + Q+A G
Sbjct: 120 -PAA---LTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARG 175
Query: 183 CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDA 242
V +A ++ ++ LG + D A QG D+ +D +GG +LDA
Sbjct: 176 ARVFATA-RGSDLEYVR-DLGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDA 231
Query: 243 ALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG------FLQSDYLHLYP 296
+ ++ G + C G H L L K+ T G L ++ L +
Sbjct: 232 SFSAVKRFGHVVSCL---------GWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFG 282
Query: 297 RFLDYVISNYKQGKI-VYVEDMNEGLENAPAAFVGLF----SGKNVGKQVVRVA 345
L + + GK+ ++ + +A+ + + GK + V
Sbjct: 283 EMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-24
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 41/298 (13%)
Query: 55 DPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE----- 109
++ +++++ P G + G + SD N GD V G+ G+
Sbjct: 56 SGFVAKKLKNNL------PSGLG--YDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCC 107
Query: 110 --EYSLIRKTEQLRKIQPDHHIPLSY-HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAA 166
EY ++K + LS+ L G TA ++ K G+ V + A
Sbjct: 108 YAEYVCASPDTIIQK--LEK---LSFLQAASLPTAGLTALQALNQA-EVKQGDVVLIHAG 161
Query: 167 SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ 226
+G VG L QLAK G V+ +A S + LK LG ++ NY++E D + A+
Sbjct: 162 AGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAI----ST 214
Query: 227 GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286
+D D VGG++ ++ +++ G I VS+ + + I + +
Sbjct: 215 PVDAVIDLVGGDVGIQSIDCLKETGCI-----VSVPTITAGRVIEVAKQKHRRAFGL--L 267
Query: 287 LQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
Q + L Y+ + K+ L A A L +G GK V +V
Sbjct: 268 KQFN-----IEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 7e-24
Identities = 68/299 (22%), Positives = 104/299 (34%), Gaps = 46/299 (15%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL--TGWEEYSLIRKTEQLRKIQPDHHI 129
PFVP + GV + V F+PGD V GW +
Sbjct: 83 FPFVPA--SDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAH 140
Query: 130 P--LSYHI-----GLLGMP--------------GFTAYAGFHEVCSPKSGEYVFVSAASG 168
P LS ++ + P G TA+ E ++G+ V V G
Sbjct: 141 PGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG 200
Query: 169 AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QG 227
V Q+AK G V+ ++ S +K+D LG D N +E D V + +G
Sbjct: 201 -VALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE-DWVERVYALTGDRG 257
Query: 228 IDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287
D + GG L +L + GRI+V G++ + + L+ K ++G
Sbjct: 258 ADHILEIAGGAGLGQSLKAVAPDGRISVIGVLE-----GFEVSGPVGPLLLKSPVVQGIS 312
Query: 288 ---QSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343
+ L +D + + V DM P A L G GK V+
Sbjct: 313 VGHRRALEDLV-GAVD-------RLGLKPVIDMRYKFTEVPEALAHLDRG-PFGKVVIE 362
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 3e-23
Identities = 58/341 (17%), Positives = 102/341 (29%), Gaps = 62/341 (18%)
Query: 46 LVKNLYLS---CDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV 102
V+ ++ D MRG+ + P G G V+ V SD + + GD V
Sbjct: 40 YVRVEAVAINPSDTSMRGQFAT-------PWAFLGTDYAGTVVA--VGSDVTHIQVGDRV 90
Query: 103 AGLT-----------GWEEYSLIRKTEQLRKIQPDHHIPLSYHIG-LLGMPGFTAYAGFH 150
G + +Y++ R + P LS+ L TA
Sbjct: 91 YGAQNEMCPRTPDQGAFSQYTVTRGRVWAKI--PKG---LSFEQAAALPAGISTAGLAMK 145
Query: 151 EV------------CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 198
+ + YV V S A + Q+ +L G + + S DL
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA 204
Query: 199 KNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG----EMLDAALLNMRDHGRIA 254
K G +E F+Y +L ++ + D + AA+ R G
Sbjct: 205 K-SRGAEEVFDYRAP-NLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIG--RAGGHYV 260
Query: 255 VCGMVSLHSYHDPQGIHNLFTL--------VTKRITMKGFLQSDYLHLYPRFLDYVISNY 306
H+ + + +TL T +
Sbjct: 261 SLNPFPEHA-ATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLV 319
Query: 307 KQGKI--VYVEDMNEGLENAPAAFVGLFSGKNVG-KQVVRV 344
+ G++ + + G ++ + G+ G K VVR+
Sbjct: 320 EDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRL 360
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 5e-23
Identities = 61/323 (18%), Positives = 98/323 (30%), Gaps = 68/323 (21%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE---------------------- 109
P V G + GV +KPGD V
Sbjct: 109 PYHVLG--SDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGF 166
Query: 110 --------EYSLIRKTEQLRKIQPDHHIPLSY-HIGLLGMPGFTAY-AGFHEVCSP-KSG 158
EY ++R ++ L K P H L++ + + TAY + + K G
Sbjct: 167 ETNFGGLAEYGVVRASQLLPK--PAH---LTWEEAAVSPLCAGTAYRMLVSDRGAQMKQG 221
Query: 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE----- 213
+ V + ASG +G Q K G V S+QK ++ LG D N +
Sbjct: 222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGITDD 280
Query: 214 ------------TDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSL 261
L + + DI F++ G +++ R G + CG S
Sbjct: 281 IADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSS- 339
Query: 262 HSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGL 321
+ L K + G +++ + G +V L
Sbjct: 340 ----GYLHTFDNRYLWMKLKKIVGSHGANHEEQ-QATNRLF----ESGAVVPAMSAVYPL 390
Query: 322 ENAPAAFVGLFSGKNVGKQVVRV 344
A A + + + VGK V
Sbjct: 391 AEAAEACRVVQTSRQVGKVAVLC 413
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 1e-22
Identities = 68/283 (24%), Positives = 104/283 (36%), Gaps = 45/283 (15%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLT---GWEEYSLIRKTEQLRKIQPDHH 128
PPF+PG +E GV V G A L G E + L + P+
Sbjct: 55 PPFIPG--MEVVGV--VE---------GRRYAALVPQGGLAERVAV-PKGALLPL-PEG- 98
Query: 129 IPLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVG 187
LS + TAY + GE V V AA+GA+G Q+A+ G V+
Sbjct: 99 --LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLA 155
Query: 188 SAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNM 247
+A +K+ L LG +EA Y + + A G+D+ + V G+ ++ +L +
Sbjct: 156 AASRPEKLALPL-ALGAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLL 208
Query: 248 RDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYK 307
GR+ G L+ + + + GF +L R V
Sbjct: 209 AHGGRLVYIGAAE-----GEVAPIPPLRLMRRNLAVLGF----WLTPLLREGALVEEALG 259
Query: 308 Q------GKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
++ V A AAF L + GK VVR+
Sbjct: 260 FLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 7e-22
Identities = 61/335 (18%), Positives = 101/335 (30%), Gaps = 68/335 (20%)
Query: 60 GRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE---------- 109
GR+ +P V G + GV ++ GD V
Sbjct: 105 GRVSDLAKRHDLPYHVIG--SDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162
Query: 110 --------------------EYSLIRKTEQLRKIQPDHHIPLSYHI-GLLGMPGFTAYAG 148
E +L++ + + K PDH LS+ G+ TAY
Sbjct: 163 TMLDPEQRIWGFETNFGGLAEIALVKSNQLMPK--PDH---LSWEEAAAPGLVNSTAYRQ 217
Query: 149 FHEVCS--PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE 206
K G+ V + ASG +G Q A G + S QK ++ + +G +
Sbjct: 218 LVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEA 276
Query: 207 AFNYNDETDLV-----------------AALKRCFPQGIDIYFDNVGGEMLDAALLNMRD 249
+ N E + + IDI F++ G E A++ R
Sbjct: 277 IIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRK 336
Query: 250 HGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQG 309
G I C S ++ L + G ++Y + + +G
Sbjct: 337 GGTITTCASTS-----GYMHEYDNRYLWMSLKRIIGSHFANYREAW-EANRLI----AKG 386
Query: 310 KIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
+I LE+ A + + GK V
Sbjct: 387 RIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLC 421
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 2e-21
Identities = 66/314 (21%), Positives = 104/314 (33%), Gaps = 32/314 (10%)
Query: 51 YLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE- 109
Y + M+ P G + GV D FKPGD V
Sbjct: 73 YGATALNMKRDPLHVKIKGEEFPLTLG--RDVSGVVMECGLDVKYFKPGDEVWAAVPPWK 130
Query: 110 -----EYSLIRKTEQLRKIQPDHHIPLSY-HIGLLGMPGFTAYAGFHEV----CSPKSGE 159
E+ ++ E K P L++ L TA++ ++V +G+
Sbjct: 131 QGTLSEFVVVSGNEVSHK--PKS---LTHTQAASLPYVALTAWSAINKVGGLNDKNCTGK 185
Query: 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219
V + ASG VG Q+ K +V S +L++ KLG D+ +Y +
Sbjct: 186 RVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQ 242
Query: 220 LKRCFPQGIDIYFDNVGGEMLDAAL--LNMRDHGR---IAVCGMVSLHSYHDPQGIHNLF 274
LK + D DNVGG A L + ++++ G+
Sbjct: 243 LKS--LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTG 300
Query: 275 TLVTKRITMKGFLQSDYLHLYPRF----LDYVISNYKQGKIVYVEDMNEGLENAPAAFVG 330
V + + Y + LD + GKI V + P AF+
Sbjct: 301 VTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLK 360
Query: 331 LFSGKNVGKQVVRV 344
+ G GK V+ V
Sbjct: 361 VERGHARGKTVINV 374
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 91.5 bits (227), Expect = 8e-21
Identities = 42/211 (19%), Positives = 59/211 (27%), Gaps = 17/211 (8%)
Query: 56 PYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIR 115
+ S G EG GV S G YS
Sbjct: 74 ARVPEGAMRSMAGRLDASMPVG--NEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYS--- 128
Query: 116 KTEQLRKIQPDHHIPLSYHIGL-----LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAV 170
Q R I D + L + TA G E + + +AA+ +
Sbjct: 129 ---QYRCIPADQCLVLPEGATPADGASSFVNPLTAL-GMVETMRLEGHSALVHTAAASNL 184
Query: 171 GQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR-CFPQGID 229
GQ++ Q+ G +V ++ DLLK G N + L G
Sbjct: 185 GQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASP-TFMQDLTEALVSTGAT 242
Query: 230 IYFDNVGGEMLDAALLNMRDHGRIAVCGMVS 260
I FD GG L +L + S
Sbjct: 243 IAFDATGGGKLGGQILTCMEAALNKSAREYS 273
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 7e-19
Identities = 61/307 (19%), Positives = 111/307 (36%), Gaps = 60/307 (19%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLV--AGLTG----WEEYSLI------RKTEQ 119
P V G + GV + V ++ F GD+V +G EY LI + +
Sbjct: 59 APRVLG--FDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKN 116
Query: 120 LRKIQPDHH----IPLSYHIGLLGMPGFTAY------AGFHEVCSPKSGEYVFVSAASGA 169
+ +PL+ G TAY G + G+ + + +G
Sbjct: 117 I-----SAEQAVSLPLT---------GITAYETLFDVFGISRNRNENEGKTLLIINGAGG 162
Query: 170 VGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID 229
VG + Q+AK +G V+ +A ++ ++ K K+G D N+ L+ K + +D
Sbjct: 163 VGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHK--ESLLNQFKTQGIELVD 219
Query: 230 IYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRIT------ 282
F +M D + ++ G IA + +L L K ++
Sbjct: 220 YVFCTFNTDMYYDDMIQLVKPRGHIATIV--------AFENDQDLNALKPKSLSFSHEFM 271
Query: 283 -MKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEG---LENAPAAFVGLFSGKNVG 338
+ Q+D + + +L+ + + +Q EN A L S +G
Sbjct: 272 FARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIG 331
Query: 339 KQVVRVA 345
K V+ +
Sbjct: 332 KLVINLN 338
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 3e-18
Identities = 62/206 (30%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEE-------YSLIRKTEQLRKIQP 125
PFVPG ++ GV VV S +P F+ GD V TG+E YS + ++
Sbjct: 61 PFVPG--IDLAGV--VVSSQHPRFREGDEVI-ATGYEIGVTHFGGYS------EYARLHG 109
Query: 126 DHHIPL-----SYHIGLLGMPGFTAYAGFH---EVCSPKSGEYVFVSAASGAVGQLVGQL 177
+ +PL +G GFTA H E V V+ A+G VG L +
Sbjct: 110 EWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSM 169
Query: 178 AKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP---QGIDIYFDN 234
G V S G + + D L+ LG A D++A R P Q D
Sbjct: 170 LAKRGYTVEASTGKAAEHDYLR-VLG---AKEVLAREDVMAERIR--PLDKQRWAAAVDP 223
Query: 235 VGGEMLDAALLNMRDHGRIAVCGMVS 260
VGG L L MR G +AV G+
Sbjct: 224 VGGRTLATVLSRMRYGGAVAVSGLTG 249
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 64/298 (21%), Positives = 107/298 (35%), Gaps = 58/298 (19%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEE-------YSLIRKTEQLRKIQP 125
P +PG ++ G V S++P F G V LTGW + + +++
Sbjct: 58 PMIPG--IDFAGT--VHASEDPRFHAGQEVL-LTGWGVGENHWGGLA------ERARVKG 106
Query: 126 DHHIPL-----SYHIGLLGMPGFTAYAGFHEVCS---PKSGEYVFVSAASGAVGQLVGQL 177
D + L S + ++G GFTA + V V+ ASG VG L
Sbjct: 107 DWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVAL 166
Query: 178 AKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237
G V +G LK LG + + ++ + K+ + ID VG
Sbjct: 167 LHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAID----TVGD 221
Query: 238 EMLDAALLNMRDHGRIAVCGMV---SLHSYHDP--------QGIHNLFTLVTKRITMKGF 286
++L L M G +A CG+ +L + P QG+ ++ T +R
Sbjct: 222 KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWAR 281
Query: 287 LQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
L D L F + L +AP + + + G+ +V++
Sbjct: 282 LVKD---LPESFYAQAA------TEI-------TLADAPKFADAIINNQVQGRTLVKI 323
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 70/307 (22%), Positives = 111/307 (36%), Gaps = 73/307 (23%)
Query: 73 PFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEE-------YSLIRKTEQLRKIQP 125
P + G ++ G VV S++P F GD V T +E S + +
Sbjct: 62 PLILG--IDAAGT--VVSSNDPRFAEGDEVI-ATSYELGVSRDGGLS------EYASVPG 110
Query: 126 DHHIPL-----SYHIGLLGMPGFTAYAGFHEVCS---PKSGEYVFVSAASGAVGQLVGQL 177
D +PL + G GFTA H + V V+ A+G VG + +
Sbjct: 111 DWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSM 170
Query: 178 AKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP---QGIDIYFDN 234
G VV S G+ + D LK +LG A D+ + Q D
Sbjct: 171 LNKRGYDVVASTGNREAADYLK-QLG---ASEVISREDVYDGTLK--ALSKQQWQGAVDP 224
Query: 235 VGGEMLDAALLNMRDHGRIAVCGM-----------------VSLHSYHDPQGIHNLFTLV 277
VGG+ L + L ++ G +AV G+ VSL GI +++ +
Sbjct: 225 VGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSL------LGIDSVYCPM 278
Query: 278 TKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNV 337
R + + SD L P L ++ + V LE P A + +
Sbjct: 279 DVRAAVWERMSSD---LKPDQLLTIVD-----REV-------SLEETPGALKDILQNRIQ 323
Query: 338 GKQVVRV 344
G+ +V++
Sbjct: 324 GRVIVKL 330
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 2e-15
Identities = 62/310 (20%), Positives = 104/310 (33%), Gaps = 65/310 (20%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------LTGWE---------- 109
P G E G + V + + GDLVA G E
Sbjct: 62 LPVTLGH--EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 110 --------EYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEY 160
EY ++ + L+ L G T Y + S +
Sbjct: 120 INFDGAYAEYVIVP-HYKYMYK-LRR---LNAVEAAPLTCSGITTYRAVRKA-SLDPTKT 173
Query: 161 VFVSAASGAVGQLVGQLAK-LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219
+ V A G +G + Q+AK + G ++G + V+ K + G D N + + D +A
Sbjct: 174 LLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQ-DPLAE 231
Query: 220 LKR-CFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL--FT 275
++R +G+D D E L + G+ + G+ +
Sbjct: 232 IRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGL--------FGADLHYHAPL 283
Query: 276 LVTKRITMKGFL---QSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLF 332
+ I G L QSD+L + + + GK+ + LE A A L
Sbjct: 284 ITLSEIQFVGSLVGNQSDFLGI----MRLA----EAGKVKPMITKTMKLEEANEAIDNLE 335
Query: 333 SGKNVGKQVV 342
+ K +G+QV+
Sbjct: 336 NFKAIGRQVL 345
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 5e-15
Identities = 52/314 (16%), Positives = 100/314 (31%), Gaps = 61/314 (19%)
Query: 62 MRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE------EYSLI- 114
+R S V G + G+ V D F+PGD V E+ L+
Sbjct: 71 VRRSTPPDGTDWKVIGY--DAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVD 128
Query: 115 -----RKTEQLRKIQPDHH----IPLSYHIGLLGMPGFTAYAGFHEV-----CSPKSGEY 160
RK + L D +PL+ TA+ F + P +
Sbjct: 129 ERIVGRKPKTL-----DWAEAAALPLT---------SITAWEAFFDRLDVNKPVPGAAPA 174
Query: 161 VFVSAASGAVGQLVGQLAK-LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219
+ + +G VG + Q+A+ V+ +A + + +K LG +++ L A
Sbjct: 175 ILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHS--KPLAAE 231
Query: 220 LKRCFPQGID-IYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVT 278
+ ++ + + GR + D ++
Sbjct: 232 VAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI---------DDPSAFDIMLFKR 282
Query: 279 KRITMKG---FLQSDYLHLYP----RFLDYVISNYKQGKI-VYVEDMNEGL--ENAPAAF 328
K +++ F + + R L+ V +G++ + + + N A
Sbjct: 283 KAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAH 342
Query: 329 VGLFSGKNVGKQVV 342
+ SG GK V+
Sbjct: 343 ALVESGTARGKVVI 356
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 1e-14
Identities = 50/295 (16%), Positives = 88/295 (29%), Gaps = 43/295 (14%)
Query: 62 MRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWE------EYSLIR 115
+ ++ VPG V+G GV V + + G VA T + E++++
Sbjct: 48 FIKANPINWSNGHVPG--VDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLN 105
Query: 116 KTEQLRKIQPDHHIPLSY-HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLV 174
+ PD+ LS+ L P TA+ F E V + GAV L+
Sbjct: 106 TDRVMTL--PDN---LSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLL 158
Query: 175 GQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234
Q+ G V +S L K G + + Q FD
Sbjct: 159 TQMLNNAGYVVDL-VSASLSQALAA-KRGVRHLYREPSQV----------TQKYFAIFDA 206
Query: 235 VGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQ-------GIHNLFTLVTKRITMKGFL 287
V + A + +++ +G I + H + + F
Sbjct: 207 VNSQNAAALVPSLKANGHII---CIQDRIPAPIDPAFTRTISYHEIALG-----ALHDFG 258
Query: 288 QSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVV 342
+ + + +++ QGK+ E A K +
Sbjct: 259 DRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 4e-14
Identities = 54/283 (19%), Positives = 97/283 (34%), Gaps = 49/283 (17%)
Query: 81 EGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIR-KTEQLRKIQPDHH-------IPLS 132
EG GV PGD V G+ L + +I P +P+
Sbjct: 271 EGAGVVVETGPGVTGLAPGDRVMGMIPKAFGPLAVADHRMVTRI-PAGWSFARAASVPIV 329
Query: 133 YHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192
+ TAY ++ + GE + V +A+G VG QLA+ G V +A
Sbjct: 330 F---------LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380
Query: 193 QKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGEMLDAALLNMRDHG 251
+ + L + + D +G+D+ +++ GE DA+L + G
Sbjct: 381 KWQAVE---LSREHLASSRT-CDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGG 436
Query: 252 RIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP----RFLDYVISNYK 307
R G + + H ++ + F D + P L ++ ++
Sbjct: 437 RFLELGKTDVRDPVEVADAH-------PGVSYQAF---DTVEAGPQRIGEMLHELVELFE 486
Query: 308 QGKI------VYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344
+ + + AP A L ++VGK V+ +
Sbjct: 487 GRVLEPLPVTAW------DVRQAPEALRHLSQARHVGKLVLTM 523
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 4e-13
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 143 FTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202
TA+ EV GE V + +A+G VG +AK+ G + +AGS K ++L +L
Sbjct: 24 LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL 82
Query: 203 GFDEAFNYNDETDLVAALKRCFP-QGIDIYFDNVGGEMLDAALLNMRDHGR 252
G + + D + G+D+ +++ GE + + + GR
Sbjct: 83 GVEYVGDSRS-VDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGR 132
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 55/306 (17%), Positives = 99/306 (32%), Gaps = 56/306 (18%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------LTGWE---------- 109
P+ G E G + V + GD V G +
Sbjct: 73 LPYTLGH--ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPG 130
Query: 110 --------EYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSP-KSGEY 160
E+ + K+ D + L G TAY + G Y
Sbjct: 131 LNIDGGFAEFMRT-SHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAY 189
Query: 161 VFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219
V + G +G + QL K+ V+ +K+ L + +LG D + D V
Sbjct: 190 VAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDARR--DPVKQ 245
Query: 220 LKR-CFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH-NLFTL 276
+ +G+++ D VG +D + GR+ + G + +
Sbjct: 246 VMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY--------GGELRFPTIRV 297
Query: 277 VTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKN 336
++ ++ +G L +Y+ L + QGK+ VE L+ L G+
Sbjct: 298 ISSEVSFEGSLVGNYVEL-HELVTL----ALQGKVR-VEVDIHKLDEINDVLERLEKGEV 351
Query: 337 VGKQVV 342
+G+ V+
Sbjct: 352 LGRAVL 357
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 4e-12
Identities = 61/324 (18%), Positives = 103/324 (31%), Gaps = 69/324 (21%)
Query: 71 IPPFVPGQPVEGFGV-----SKVVDSDNPNFKPGDLVAGLTGWE---------------- 109
P + G EG G + D + KPGDL+ G
Sbjct: 70 PLPIILGH--EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLC 127
Query: 110 -----------------------EYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAY 146
+ ++ + K+ L + + G TAY
Sbjct: 128 PNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEK--DDLD-VLAMAMCSGATAY 184
Query: 147 AGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD 205
F E +G+ V + A G +G +A+ G V+ AGS ++ L + ++G D
Sbjct: 185 HAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGAD 242
Query: 206 EAFNYNDET--DLVAALKR-CFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSL 261
N + + + A+ +G D + G L +R G +V G+
Sbjct: 243 LTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP 302
Query: 262 HSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM---N 318
DP LV K T KG SD H +S + + + +
Sbjct: 303 ---QDPVPFKVYEWLVLKNATFKGIWVSDTSHFV-----KTVSITSRNYQL-LSKLITHR 353
Query: 319 EGLENAPAAFVGLFSGKNVGKQVV 342
L+ A A + S + K ++
Sbjct: 354 LPLKEANKALELMESRE-ALKVIL 376
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 5e-11
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK-L 202
TAY + GE V + + SG VGQ +A GC V + GS++K L+ +
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 203 GFDEAFNYNDETDLVAA---LKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRI 253
DE + + D L+ +G+D+ +++ E L A++ + HGR
Sbjct: 1714 QLDET-CFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRF 1766
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 5e-11
Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 24/192 (12%)
Query: 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213
K+G V + G +G L QLA+L G V+ S + K L + ++G + +
Sbjct: 180 IKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG 237
Query: 214 --TDLVAALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGI 270
+ +A P G+D+ + G + + + G + + G+ + +
Sbjct: 238 DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV-----LPQGEKV 292
Query: 271 H-NLFTLVTKRITMKG-FLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM---NEGLENAP 325
F ++ + + + G F+ ++ R D V G I ++ M L+ AP
Sbjct: 293 EIEPFDILFRELRVLGSFI---NPFVHRRAADLV----ATGAIE-IDRMISRRISLDEAP 344
Query: 326 AAFVGLFSGKNV 337
+ V
Sbjct: 345 DVISNPAAAGEV 356
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 6e-11
Identities = 52/337 (15%), Positives = 98/337 (29%), Gaps = 70/337 (20%)
Query: 57 YMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------ 104
+ G++ S V G E GV V+ F GDLV
Sbjct: 45 IVNGKLTLSTLPKGKDFLVLGH--EAIGV---VEESYHGFSQGDLVMPVNRRGCGICRNC 99
Query: 105 LTGWE---------------------EYSLIRKTEQLRKIQPDHHI--------PLS--Y 133
L G E+ + L KI P I PL+
Sbjct: 100 LVGRPDFCETGEFGEAGIHKMDGFMREWWYDD-PKYLVKI-PK-SIEDIGILAQPLADIE 156
Query: 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193
+ + + V V G +G L L + +G V +
Sbjct: 157 KSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREP 215
Query: 194 KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE--MLDAALLNMRDHG 251
++ + + NY + ++ LK D+ D G + +L + + +G
Sbjct: 216 --TEVEQTVIEETKTNYYNSSNGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNG 272
Query: 252 RIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKI 311
+ + G + S P L +V T+ G + H + + + ++ S K
Sbjct: 273 VLGLFGFSTSGSV--PLDYKTLQEIVHTNKTIIGLVNGQKPH-FQQAVVHLAS----WKT 325
Query: 312 VYVEDMNE------GLENAPAAFVGLFSGKNVGKQVV 342
+Y + + + L ++ ++
Sbjct: 326 LYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIR 362
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 4e-10
Identities = 63/315 (20%), Positives = 110/315 (34%), Gaps = 70/315 (22%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------LTGWE---------- 109
PP + G E G + + GD V+ G
Sbjct: 61 PPQIMGH--EVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG 118
Query: 110 --------EYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYA-GFHEVCS-PKSGE 159
EY+++ + + K P + L P V + P SG+
Sbjct: 119 VDTDGVFAEYAVVPA-QNIWKN-PKS---IPPEYATLQEP----LGNAVDTVLAGPISGK 169
Query: 160 YVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVA 218
V ++ A G +G L +AK G V+ S S + +L K K+G D N +E D+V
Sbjct: 170 SVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFEE-DVVK 226
Query: 219 ALKRCF-PQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTL 276
+ G+D++ + G L+ L + GR+++ G+ Y I +
Sbjct: 227 EVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-----YPGKVTIDFNNLI 281
Query: 277 VTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE-------GLENAPAAFV 329
+ K +T+ G + + S GK+ +++ G + AF
Sbjct: 282 IFKALTIYGITGRHLWETWYTVSRLLQS----GKL----NLDPIITHKYKGFDKYEEAFE 333
Query: 330 GLFSGKNVGKQVVRV 344
+ +GK GK V +
Sbjct: 334 LMRAGK-TGKVVFML 347
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 5e-10
Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 20/205 (9%)
Query: 148 GFHEVCSPKS----GEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL 202
++ V G+ V + G +G + K G V+ S S + +L K +L
Sbjct: 200 AYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-EL 257
Query: 203 GFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVS 260
G D + E + V A+ G ++ + G + + + R + V+
Sbjct: 258 GADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRAR-GINATVA 315
Query: 261 LHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV---YVEDM 317
+ + D + +R + G +PR + + S KI+
Sbjct: 316 IVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKIISKTV---- 371
Query: 318 NEGLENAPAAFVGLFSGKNVGKQVV 342
+E P L + K++ K +
Sbjct: 372 --SMEEIPEYIKRLQTDKSLVKVTM 394
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 9e-10
Identities = 58/316 (18%), Positives = 90/316 (28%), Gaps = 77/316 (24%)
Query: 72 PPFVPGQPVEGFGVSKVVDS-DNPNFKPGDLVAG------------LTGWE--------- 109
P + G E G +V+ + K GD V G
Sbjct: 59 LPIILGH--ENAGT--IVEVGELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP 114
Query: 110 ---------EYSLIRKTEQLRKIQPDHHIPL-----SYHIGLLGMPGFTAYAGFHE---V 152
EY L++ + L G T+ +
Sbjct: 115 GQTTNGGFSEYMLVK---------SSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPF 165
Query: 153 CSPKSGEYVFVSAASGAVGQLVGQLAK--LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210
S + V V+ G + Q+ K + +VG + S + D +LG D
Sbjct: 166 ISKFAEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYVSEM 223
Query: 211 NDETDLVAALKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQG 269
D L+ L G I D VG E + G I + GM
Sbjct: 224 KDAESLINKLTD--GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGM--------EGK 273
Query: 270 IHNL--FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKI-VYVEDMNEGLENAPA 326
+L F + G L + + GKI Y+ + L++
Sbjct: 274 RVSLEAFDTAVWNKKLLGSNYGSLNDL-EDVVRLS----ESGKIKPYIIKV--PLDDINK 326
Query: 327 AFVGLFSGKNVGKQVV 342
AF L G+ G+QV+
Sbjct: 327 AFTNLDEGRVDGRQVI 342
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 2e-09
Identities = 52/255 (20%), Positives = 84/255 (32%), Gaps = 63/255 (24%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG-------------LTGWEEY------- 111
P V G EG GV + + +K GD G E
Sbjct: 60 LPLVGGH--EGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS 117
Query: 112 ----------SLIRKTEQLRKIQPDHHIPLSYHIGLLGMP----------GFTAYAGFHE 151
Q I P G G T Y
Sbjct: 118 GYTHDGSFQQYATADAVQAAHI-PQ------------GTDLAQVAPILCAGITVYKALKS 164
Query: 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYN 211
+ +G +V +S A+G +G L Q AK G V+G G K +L + +G + ++
Sbjct: 165 -ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDFT 222
Query: 212 DETDLVAALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGI 270
E D+V A+ + G + E ++A+ +R +G + GM + +
Sbjct: 223 KEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPA-----GAKCC 277
Query: 271 HNLFTLVTKRITMKG 285
++F V K I++ G
Sbjct: 278 SDVFNQVVKSISIVG 292
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 56/307 (18%), Positives = 88/307 (28%), Gaps = 55/307 (17%)
Query: 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------LTGWEEY--SLIRKT 117
P G EG G + F GD VA G E Y
Sbjct: 56 LPLTLGH--EGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLG 113
Query: 118 EQLRKIQPD------------HHIPL-----SYHIGLLGMPGFTAYAGFHEVCSP-KSGE 159
+ H+ L G T Y V G
Sbjct: 114 ITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGS 173
Query: 160 YVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVA 218
V G +G + Q+ + V+ ++ L + ++G D A
Sbjct: 174 TAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVK--SGAGAAD 229
Query: 219 ALKR-CFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTL 276
A++ QG FD VG +D A + G I+V G+ H F +
Sbjct: 230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGI------HAGAHAKVGFFM 283
Query: 277 VTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKI-VYVEDMNEGLENAPAAFVGLFSGK 335
+ ++ L + + G++ ++ E L+ PAA+ L G
Sbjct: 284 IPFGASVVTPYWGTRSEL-MEVVAL----ARAGRLDIHTETF--TLDEGPAAYRRLREGS 336
Query: 336 NVGKQVV 342
G+ VV
Sbjct: 337 IRGRGVV 343
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 33/196 (16%), Positives = 65/196 (33%), Gaps = 17/196 (8%)
Query: 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213
+ V + A G +G L Q A G V SS+K+ L K G + FN + E
Sbjct: 158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFN-SSE 214
Query: 214 TDLVAALKRCF-PQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH 271
+ + + G ++ A+ H ++A+ G H +
Sbjct: 215 MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGT-----LHQDLHLT 269
Query: 272 --NLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM---NEGLENAPA 326
++ K +T+ G + + + + K+ +E + E+
Sbjct: 270 SATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLS-LEPLIAHRGSFESFAQ 328
Query: 327 AFVGLFSGKNVGKQVV 342
A + GK ++
Sbjct: 329 AVRDIARNAMPGKVLL 344
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 4e-09
Identities = 60/319 (18%), Positives = 106/319 (33%), Gaps = 65/319 (20%)
Query: 71 IPPFVPGQPV----EGFGVSKVVDSDNPNFKPGDLVA----------------------- 103
I F+ P+ E G V + + K GD VA
Sbjct: 53 IADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPD 112
Query: 104 ----GLTGWE----EYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSP 155
+ Y + + K+ PD+ +S G L P
Sbjct: 113 LTFCATPPDDGNLARYYVHA-ADFCHKL-PDN---VSLEEGALLEPLSVGVHACRRA-GV 166
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYN---- 211
+ G V V A G +G + AK +G +VV +A S +++++ K G D +
Sbjct: 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVDPAKE 224
Query: 212 DETDLVAALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGI 270
+E+ ++ ++ ++ D G E + + R G + + GM +
Sbjct: 225 EESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGM-----GSQMVTV 279
Query: 271 HNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM---NEGLENAPAA 327
L + I +K + Y + YP L+ V S G+ V+ + + LE A
Sbjct: 280 -PLVNACAREIDIKSVFR--YCNDYPIALEMVAS----GRCN-VKQLVTHSFKLEQTVDA 331
Query: 328 FVGLFSGK-NVGKQVVRVA 345
F N K ++
Sbjct: 332 FEAARKKADNTIKVMISCR 350
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 6e-09
Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 25/190 (13%)
Query: 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214
SG+ V ++ A G +G + + + G ++ S + ++ + D N +E
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218
Query: 215 DLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL 273
DL+ ++R G+++ + G E + L+ + G + G+ DP
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI-----PSDPIRFDLA 273
Query: 274 FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE------GLENAPAA 327
LV + IT G + + V G++ D++ L A
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTALV----YSGRV----DLSPLLTHRLPLSRYREA 325
Query: 328 FVGLFSGKNV 337
F L SG+ V
Sbjct: 326 FGLLASGQAV 335
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 37/198 (18%), Positives = 76/198 (38%), Gaps = 25/198 (12%)
Query: 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213
G V V A G +G + +AK G VV + S+ ++ K ++G D + E
Sbjct: 169 VTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKE 226
Query: 214 T--DLVAALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGI 270
+ ++ ++ ++ + G E + A + R G + + G+ + +
Sbjct: 227 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGL-----GSEMTTV 281
Query: 271 HNLFTLVTKRITMKG-FLQSDYLHLYPRFLDYVISNYKQGKIVYVEDM---NEGLENAPA 326
L + + +KG F Y + +P + + S + V+ + LE A
Sbjct: 282 -PLLHAAIREVDIKGVFR---YCNTWPVAISMLAS----KSVN-VKPLVTHRFPLEKALE 332
Query: 327 AFVGLFSGKNVGKQVVRV 344
AF G + K +++
Sbjct: 333 AFETFKKGLGL-KIMLKC 349
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 5e-07
Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 93/262 (35%)
Query: 91 SDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGF--TAYAG 148
+DN F ++ + + Y +R+ L +++P ++ + G+ G T A
Sbjct: 121 NDNQVFAKYNV----SRLQPYLKLRQA--LLELRPAKNVLI--D----GVLGSGKTWVAL 168
Query: 149 FHEVCSPKSGEYVFVSAASGAV-----GQ------LVGQLAKLHGCYVVGSAGSSQKVDL 197
+VC Y + ++ L KL Y + +S+
Sbjct: 169 --DVCL----SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL--LYQIDPNWTSRS--- 217
Query: 198 LKNKLGFDEAFNYNDET-DLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVC 256
D + N + A L+R + + LL + + V
Sbjct: 218 -------DHSSNIKLRIHSIQAELRRLLKS-----------KPYENCLLVLLN-----VQ 254
Query: 257 GMVSLHSYHDPQGIHNLF-----TLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKI 311
+ + N F L+T R + + D++ +
Sbjct: 255 ---------NAKAW-NAFNLSCKILLTTR--------------FKQVTDFLSAATT--TH 288
Query: 312 VYVEDMNEGLENAPAAFVGLFS 333
+ ++ + L P L
Sbjct: 289 ISLDHHSMTLT--PDEVKSLLL 308
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 32/204 (15%), Positives = 71/204 (34%), Gaps = 33/204 (16%)
Query: 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFN---Y 210
+ G+ V + A G +G + AK G +V + ++ K ++ + +
Sbjct: 177 VRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EICPEVVTHKVER 234
Query: 211 NDETDLVAALKRCF-PQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQ 268
+ + F + + G E + AA+ ++ G++ V G+ +
Sbjct: 235 LSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGK-----NEI 289
Query: 269 GIHNLFTLVTKRITMKG-FLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNE------GL 321
I + + ++ + Y + +PR + V + G + D+ L
Sbjct: 290 QI-PFMRASVREVDLQFQYR---YCNTWPRAIRLVEN----GLV----DLTRLVTHRFPL 337
Query: 322 ENAPAAFVGLFSGK-NVGKQVVRV 344
E+A AF K K ++
Sbjct: 338 EDALKAFETASDPKTGAIKVQIQS 361
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 6e-06
Identities = 53/248 (21%), Positives = 81/248 (32%), Gaps = 51/248 (20%)
Query: 71 IPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG-------------LTGWEEY------ 111
P +PG EG G+ + V + K GD V L+G E
Sbjct: 54 KLPLIPGH--EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN 111
Query: 112 -----------SLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEY 160
+ + KI PD+ + + G T Y K GE+
Sbjct: 112 AGYSVDGGYAEYCRAAADYVVKI-PDN-LSFE-EAAPIFCAGVTTYKALKV-TGAKPGEW 167
Query: 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220
V + G +G + Q AK G VV +K++L K +LG D N E D +
Sbjct: 168 VAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE-DAAKFM 224
Query: 221 KRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH--NLFTLV 277
K G+ + +A ++R G + G+ P +F V
Sbjct: 225 KEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGL--------PPEEMPIPIFDTV 275
Query: 278 TKRITMKG 285
I + G
Sbjct: 276 LNGIKIIG 283
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 57/258 (22%), Positives = 84/258 (32%), Gaps = 71/258 (27%)
Query: 71 IPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG-------------LTGWEEY------ 111
PF+PG EG G V S K GD V L GWE
Sbjct: 56 TLPFIPGH--EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN 113
Query: 112 -----------SLIRKTEQLRKIQPDHHIPLSYHIGLLGMP----------GFTAYAGFH 150
++ + + PD + G T Y G
Sbjct: 114 TGYSVNGGYGEYVVADPNYVGLL-PD------------KVGFVEIAPILCAGVTVYKGLK 160
Query: 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210
+ G++V +S G +G + Q A+ G V K++L + +LG + A N
Sbjct: 161 V-TDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNA 217
Query: 211 NDETDLVAALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQG 269
D D A L++ G A+ +R G IA+ G+ P G
Sbjct: 218 RDT-DPAAWLQKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGL--------PPG 267
Query: 270 IHNL--FTLVTKRITMKG 285
F +V K IT++G
Sbjct: 268 DFGTPIFDVVLKGITIRG 285
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 347 | |||
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.91 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.95 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.9 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.83 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.79 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.7 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.54 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.5 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 98.28 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.28 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.23 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.22 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.21 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.09 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 98.05 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.04 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 97.95 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.94 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.92 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.89 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.87 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.84 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.83 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.82 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.82 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 97.82 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.82 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.81 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.79 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.79 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.79 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.79 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.79 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.78 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.75 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.75 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.75 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 97.75 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.74 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 97.73 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 97.72 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.72 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.72 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.72 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.72 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.71 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.71 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.7 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 97.7 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 97.7 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.69 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 97.68 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.68 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.68 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.68 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 97.68 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.67 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.66 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.66 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.65 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 97.65 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.64 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 97.63 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.63 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 97.63 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.63 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 97.62 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 97.62 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.62 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 97.62 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 97.61 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.6 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.6 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.59 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 97.59 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 97.59 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.59 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.59 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 97.59 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.58 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 97.58 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 97.58 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 97.58 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 97.58 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.58 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 97.58 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.58 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.58 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.58 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 97.58 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.58 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.57 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 97.57 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 97.57 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.57 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 97.57 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.56 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 97.56 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 97.56 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 97.56 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.55 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 97.55 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.55 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.54 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 97.54 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 97.54 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 97.53 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 97.53 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 97.53 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 97.53 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.53 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.53 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.53 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.51 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 97.51 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 97.51 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.5 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.5 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 97.5 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.5 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 97.5 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.49 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 97.49 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 97.49 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.48 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 97.48 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.48 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 97.47 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.47 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.47 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.47 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.47 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.46 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 97.46 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.46 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 97.45 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.45 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.45 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 97.44 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 97.44 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.43 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 97.43 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 97.43 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.43 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 97.43 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.42 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.42 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 97.41 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.4 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.4 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 97.39 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 97.39 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.38 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.38 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 97.37 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 97.37 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 97.37 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.36 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 97.36 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.36 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.35 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 97.35 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 97.35 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.34 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 97.34 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 97.34 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.34 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.34 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.34 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 97.34 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 97.33 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 97.33 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.33 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.33 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 97.32 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.32 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.31 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 97.31 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.31 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.31 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 97.31 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.31 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 97.3 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 97.3 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 97.3 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.29 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.28 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 97.27 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 97.27 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.27 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 97.27 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.27 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 97.26 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.26 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 97.25 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 97.25 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 97.25 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.25 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.24 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.23 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.23 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 97.23 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 97.23 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.22 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 97.21 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.2 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.19 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.19 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 97.19 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 97.18 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 97.17 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 97.17 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 97.17 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.16 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 97.16 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 97.15 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.14 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 97.14 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.13 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 97.13 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.13 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 97.1 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 97.05 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 97.05 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 97.05 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 97.05 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.03 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.03 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.02 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 97.02 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 97.02 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 97.02 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.01 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.01 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 97.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.99 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 96.98 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.96 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 96.96 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.96 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.94 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.94 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 96.94 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 96.93 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.93 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 96.92 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 96.91 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 96.91 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.9 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 96.9 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.89 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 96.86 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.85 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 96.85 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 96.85 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 96.84 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 96.84 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.82 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 96.82 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 96.81 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.8 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 96.8 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 96.79 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.77 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.76 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.75 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.73 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.73 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.73 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.73 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 96.71 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 96.71 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.71 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 96.7 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.7 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 96.7 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.69 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.68 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.67 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 96.66 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 96.66 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.65 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 96.65 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.64 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.63 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 96.62 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 96.62 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 96.6 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 96.6 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 96.58 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.57 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 96.57 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.57 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 96.56 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.55 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 96.54 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 96.52 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 96.52 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 96.51 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 96.51 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 96.49 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 96.48 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 96.47 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 96.47 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 96.47 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 96.46 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 96.46 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 96.45 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.44 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 96.43 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 96.42 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 96.42 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.41 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 96.39 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.39 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.39 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 96.38 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 96.38 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 96.38 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 96.37 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.37 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 96.36 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.34 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.33 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.32 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 96.32 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 96.3 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 96.29 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 96.26 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.26 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.26 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 96.24 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 96.23 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.22 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 96.22 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 96.21 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.19 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 96.18 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 96.18 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.15 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.15 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 96.14 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.13 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.13 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 96.13 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 96.12 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 96.12 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 96.1 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 96.05 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 96.04 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 96.04 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 96.04 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 96.03 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.03 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.03 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 96.03 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.02 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 96.0 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.0 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 96.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.99 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 95.99 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 95.98 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 95.98 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 95.98 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 95.96 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.95 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.95 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 95.94 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 95.94 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 95.93 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.92 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 95.91 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 95.91 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 95.91 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.91 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 95.91 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.91 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 95.88 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 95.87 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 95.87 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 95.87 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 95.85 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 95.82 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 95.82 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 95.81 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 95.81 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 95.8 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 95.8 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 95.78 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.76 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 95.75 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 95.72 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 95.71 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 95.71 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 95.69 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 95.69 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 95.68 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 95.67 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 95.66 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.65 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 95.64 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.63 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 95.63 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 95.62 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 95.62 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 95.6 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 95.6 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 95.59 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 95.58 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 95.56 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 95.56 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 95.56 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.54 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.54 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 95.53 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 95.53 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 95.52 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 95.52 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 95.52 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 95.49 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 95.48 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 95.47 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 95.47 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 95.46 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 95.45 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 95.44 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 95.44 |
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=401.20 Aligned_cols=321 Identities=23% Similarity=0.325 Sum_probs=283.6
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
|.|+.+|||++++++ |.|+ .+.+ .+.|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||+
T Consensus 23 ~~~p~~MkA~~~~~~--g~~~--~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~ 93 (353)
T 4dup_A 23 MSLPQEMRFVDLKSF--GGPD--VMVI--GKRPLPVAG---EGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLEL 93 (353)
T ss_dssp CCCCSSEEEEEESSS--SSGG--GEEE--EEECCCCCC---TTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEE
T ss_pred CCCChheeEEEEccC--CCcc--ceEE--EeccCCCCC---CCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccccc
Confidence 678899999999998 8774 4455 557778774 999999999999999999999987654455689999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~ 156 (347)
+| +|+++|+++++|++||+|+++ |+|+||+++|++. ++++ |++ ++++ +|+++.+++|||+++.+.++++
T Consensus 94 ~G--~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~ 166 (353)
T 4dup_A 94 SG--EIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQ-ILPF-PKG---YDAVKAAALPETFFTVWANLFQMAGLT 166 (353)
T ss_dssp EE--EEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTT---CCHHHHHTSHHHHHHHHHHHTTTTCCC
T ss_pred EE--EEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHH-cEeC-CCC---CCHHHHhhhhhHHHHHHHHHHHhcCCC
Confidence 88 999999999999999999987 8999999999998 9999 999 8886 7789999999999998889999
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIG 244 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCC
Confidence 9999999999999999999999999999999999999999999 9999999999886 8888999888449999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCc-cchHHHhhcceEeeccccccccc-----hhHHHHHHHHHHHHCCc
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGI-HNLFTLVTKRITMKGFLQSDYLH-----LYPRFLDYVISNYKQGK 310 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~g~ 310 (347)
++.++.++++++++|+++.+|..... ... .+...++.+++++.|+....... ...+.++++++++++|+
T Consensus 245 ~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 319 (353)
T 4dup_A 245 AAYFERNIASLAKDGCLSIIAFLGGA-----VAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGT 319 (353)
T ss_dssp GGGHHHHHHTEEEEEEEEECCCTTCS-----EEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTS
T ss_pred HHHHHHHHHHhccCCEEEEEEecCCC-----cccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999976542 112 55677888999999988765422 22344788999999999
Q ss_pred eeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 311 IVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 311 i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+++.+..+++++++++|++.+.+++..||+||++
T Consensus 320 l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 320 VAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp SCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred ccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999999999999999999999999889999975
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-54 Score=392.65 Aligned_cols=319 Identities=22% Similarity=0.282 Sum_probs=279.8
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
++.+|||++++++ |.++ .+.+ .+.|.|+| + ++||||||.|++||++|++.+.|.+. ..+|.++|||++|
T Consensus 5 ~p~~mka~~~~~~--g~~~--~l~~--~~~~~P~~-~--~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~P~i~G~e~~G 73 (334)
T 3qwb_A 5 IPEQQKVILIDEI--GGYD--VIKY--EDYPVPSI-S--EEELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGREASG 73 (334)
T ss_dssp CCSEEEEEEESSS--SSGG--GEEE--EEEECCCC-C--TTEEEEEEEEEECCTTHHHHHHTSSC--CCSSEECCSEEEE
T ss_pred CchheEEEEEecC--CCCc--eeEE--EeccCCCC-C--CCEEEEEEEEEecCHHHHHHHCCCCC--CCCCCccccceEE
Confidence 4578999999998 7764 4455 45777877 4 99999999999999999999888653 3468999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe--cCcceeEEee-ccccceecCCCCCCChhhh----hhhcCChhhhHHHHHHhhcCC
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL--TGWEEYSLIR-KTEQLRKIQPDHHIPLSYH----IGLLGMPGFTAYAGFHEVCSP 155 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~-~~~~~~~i~p~~~~~~~~~----~a~l~~~~~ta~~al~~~~~~ 155 (347)
+|+++|+++++|++||||+++ |+|+||+.++ ++. ++++ |++ ++++ +|+++..++|||+++.+..++
T Consensus 74 --~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~-~~~~-P~~---~~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 146 (334)
T 3qwb_A 74 --TVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-VMKL-PKG---TSDEELKLYAAGLLQVLTALSFTNEAYHV 146 (334)
T ss_dssp --EEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSS-EEEC-CTT---CCHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred --EEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcce-EEEC-CCC---CCHHHhhhhhhhhhHHHHHHHHHHHhccC
Confidence 999999999999999999976 8999999999 888 9999 999 7774 467889999999999888899
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~ 234 (347)
++|++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEEC
Confidence 99999999999999999999999999999999999999999999 9999999999886 899999999987 89999999
Q ss_pred CChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc---cchhHHHHHHHHHHHHCCce
Q 019012 235 VGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY---LHLYPRFLDYVISNYKQGKI 311 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i 311 (347)
+|+..++.++++++++|+++.+|...+. ....+...+..+++++.++....+ +....+.++++++++++|++
T Consensus 225 ~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l 299 (334)
T 3qwb_A 225 VGKDTFEISLAALKRKGVFVSFGNASGL-----IPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKL 299 (334)
T ss_dssp CGGGGHHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSS
T ss_pred CChHHHHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999976542 224455667788999987665443 33445667899999999999
Q ss_pred eeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 312 VYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 312 ~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
++.+..+++++++++||+.+.+++..||+||++++
T Consensus 300 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q 334 (334)
T 3qwb_A 300 NIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334 (334)
T ss_dssp CCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred cCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 99988999999999999999999999999999864
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-55 Score=397.68 Aligned_cols=312 Identities=23% Similarity=0.287 Sum_probs=277.2
Q ss_pred ccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCcee
Q 019012 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVE 81 (347)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~ 81 (347)
||+.+|||++++++ |. ..+.+. +.|.|+|. ++||||||.|++||++|++.+.|.+.....+|.++|||++
T Consensus 23 ~m~~~mkA~~~~~~--~~---~~l~~~--e~p~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~ 92 (363)
T 3uog_A 23 MMSKWMQEWSTETV--AP---HDLKLA--ERPVPEAG---EHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMS 92 (363)
T ss_dssp CCCSEEEEEEBSCT--TT---TCCEEE--EEECCCCC---TTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEE
T ss_pred cCchhhEEEEEccC--CC---CCcEEE--eeeCCCCC---CCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceE
Confidence 56778999999986 42 245665 47777674 9999999999999999999999876544567999999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe---------------------------cCcceeEEeeccccceecCCCCCCChhhh
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL---------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
| +|+++|+++++|++||||++. |+|+||+++|++. ++++ |++ ++++
T Consensus 93 G--~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~ 165 (363)
T 3uog_A 93 G--VVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGW-FVAA-PKS---LDAA 165 (363)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGG-EEEC-CTT---SCHH
T ss_pred E--EEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHH-eEEC-CCC---CCHH
Confidence 8 999999999999999999976 8999999999998 9999 999 8886
Q ss_pred -hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 -IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 -~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
+|+++.+++|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|++++++++++++++ ++|+++++|....
T Consensus 166 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~ 243 (363)
T 3uog_A 166 EASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE 243 (363)
T ss_dssp HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS
T ss_pred HHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc
Confidence 7789999999999998889999999999999 699999999999999999999999999999999 9999999996545
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
++.+.+++.+++ ++|++|||+|++.++.++++++++|+++.+|..... ....+...++.+++++.|+....
T Consensus 244 -~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-- 315 (363)
T 3uog_A 244 -DWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGISVGH-- 315 (363)
T ss_dssp -CHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECCCCC--
T ss_pred -cHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEecCC--
Confidence 888999999988 999999999988999999999999999999976542 12445567788999999988765
Q ss_pred chhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 293 HLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.++++++++++|.+++.+..+++|+++++|++.+.+++ .||+||++
T Consensus 316 ---~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~ 363 (363)
T 3uog_A 316 ---RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF 363 (363)
T ss_dssp ---HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred ---HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence 6789999999999999999999999999999999999998 89999975
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-54 Score=393.10 Aligned_cols=316 Identities=19% Similarity=0.260 Sum_probs=273.5
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
++.+|||+++.++ |.|. .+.+ .+.|.|++. ++||||||.|++||++|++.+.|.+.....+|.++|||++|
T Consensus 18 ~p~~MkA~~~~~~--g~~~--~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G 88 (342)
T 4eye_A 18 GPGSMKAIQAQSL--SGPE--GLVY--TDVETPGAG---PNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAG 88 (342)
T ss_dssp CCCEEEEEEECSS--SGGG--GEEE--EEEECCCCC---TTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEE
T ss_pred CCcceEEEEEecC--CCCc--eeEE--EeCCCCCCC---CCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEE
Confidence 5678999999998 7775 4455 557778774 99999999999999999999998764445679999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCC
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSG 158 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~ 158 (347)
+|+++|++++ |++||||+++ |+|+||+.++++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++|
T Consensus 89 --~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~~g 160 (342)
T 4eye_A 89 --VVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSN-ILPT-PPQ---LDDAEAVALIANYHTMYFAYARRGQLRAG 160 (342)
T ss_dssp --EEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGG-EEEC-CTT---SCHHHHHHHTTHHHHHHHHHHTTSCCCTT
T ss_pred --EEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHH-eEEC-CCC---CCHHHHHHhhhHHHHHHHHHHHhcCCCCC
Confidence 9999999999 9999999987 7999999999998 9999 999 8886 779999999999999888999999
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 237 (347)
++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|++ . ++.+.+++.+++ ++|++|||+|+
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC-
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCch
Confidence 99999999999999999999999999999999999999999 99999999998 5 899999999988 99999999999
Q ss_pred hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc----cchhHHHHHHHHHHHHCCceee
Q 019012 238 EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY----LHLYPRFLDYVISNYKQGKIVY 313 (347)
Q Consensus 238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~g~i~~ 313 (347)
+.+..++++++++|+++.+|...+. ....+...++.+++++.|+....+ ++...+.++++++++++| +++
T Consensus 238 ~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~ 311 (342)
T 4eye_A 238 PAFDDAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRP 311 (342)
T ss_dssp -CHHHHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCC
T ss_pred hHHHHHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCC
Confidence 9999999999999999999976542 123344457789999999876443 444567899999999999 999
Q ss_pred eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 314 VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 314 ~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+..+++++++++|++.+.+++..||+||++
T Consensus 312 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 312 PVSARIPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp CEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred CcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999999999999999999999999999874
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=385.90 Aligned_cols=320 Identities=18% Similarity=0.242 Sum_probs=271.1
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
+++|||++++++ |+|. .. ++..+.|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||++|
T Consensus 2 ~~~mka~~~~~~--g~p~-~~--l~~~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G- 72 (340)
T 3gms_A 2 SLHGKLIQFHKF--GNPK-DV--LQVEYKNIEPLK---DNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVG- 72 (340)
T ss_dssp CCEEEEEEESSC--SCHH-HH--EEEEEEECCCCC---TTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEE-
T ss_pred CcccEEEEEecC--CCch-he--EEEEecCCCCCC---CCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEE-
Confidence 458999999998 8762 12 444557778774 99999999999999999999999765555779999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCC
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGE 159 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~ 159 (347)
+|+++|+++++|++||+|+++ |+|+||+++|++. ++++ |++ ++++ +|+++..++|||+++.+.+++++|+
T Consensus 73 -~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~v-P~~---l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~ 146 (340)
T 3gms_A 73 -IVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADF-VVPI-PDS---IDDFTAAQMYINPLTAWVTCTETLNLQRND 146 (340)
T ss_dssp -EEEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGG-EEEC-CTT---SCHHHHTTSSHHHHHHHHHHHTTSCCCTTC
T ss_pred -EEEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHH-eEEC-CCC---CCHHHHhhhcchHHHHHHHHHHhcccCCCC
Confidence 999999999999999999976 8999999999998 9999 999 8886 7788999999999998889999999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~ 238 (347)
+|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+.
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~ 224 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGP 224 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCHH
T ss_pred EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCCCh
Confidence 9999999889999999999999999999999999999999 9999999999886 889999999988 999999999998
Q ss_pred hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHh-hcceEeeccccccc-----cchhHHHHHHHHHHHHCCcee
Q 019012 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLV-TKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~ 312 (347)
....++++++++|+++.+|..... ......+. ..++++..+....+ +....+.++++++++++|+++
T Consensus 225 ~~~~~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~ 297 (340)
T 3gms_A 225 DGNELAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLR 297 (340)
T ss_dssp HHHHHHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSC
T ss_pred hHHHHHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCc
Confidence 778888999999999999976542 12222222 23444444332211 233467899999999999999
Q ss_pred e-eeecccccccHHHHHHHhhcCcc-cceEEEEecCC
Q 019012 313 Y-VEDMNEGLENAPAAFVGLFSGKN-VGKQVVRVACE 347 (347)
Q Consensus 313 ~-~~~~~~~l~~~~~a~~~~~~~~~-~gk~vv~~~~~ 347 (347)
+ .+..+|+++++++|++.+.+++. .||++|++.++
T Consensus 298 ~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~ 334 (340)
T 3gms_A 298 FMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEG 334 (340)
T ss_dssp CCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC--
T ss_pred cccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence 8 47788899999999999999874 59999998764
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-53 Score=381.29 Aligned_cols=314 Identities=23% Similarity=0.278 Sum_probs=273.6
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |.|+ .+.+ .+.|.|+|. ++||+|||.+++||++|++.+.|.+.. ..+|.++|||++| +|
T Consensus 2 MkA~~~~~~--g~~~--~l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G--~V 69 (325)
T 3jyn_A 2 AKRIQFSTV--GGPE--VLEY--VDFEPEAPG---PQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAG--VV 69 (325)
T ss_dssp EEEEEBSSC--SSGG--GCEE--EEECCCCCC---TTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEE--EE
T ss_pred cEEEEEecC--CCcc--eeEE--eecCCCCCC---CCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEE--EE
Confidence 799999998 8774 4555 457777774 999999999999999999999886532 3568999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYV 161 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~v 161 (347)
+++|+++++|++||+|++. |+|+||+.+|++. ++++ |++ ++++ +|+++..++|||+++.+.+++++|++|
T Consensus 70 ~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V 144 (325)
T 3jyn_A 70 EAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEAN-LVKL-ADS---VSFEQAAALMLKGLTVQYLLRQTYQVKPGEII 144 (325)
T ss_dssp EEECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGG-EEEC-CTT---SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEE
T ss_pred EEECCCCCCCCCCCEEEEecCCCccccceEEecHHH-eEEC-CCC---CCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEE
Confidence 9999999999999999974 8999999999998 9999 999 8886 788899999999999888899999999
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhH
Q 019012 162 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEML 240 (347)
Q Consensus 162 LI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~ 240 (347)
||+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|++.+
T Consensus 145 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~ 222 (325)
T 3jyn_A 145 LFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTW 222 (325)
T ss_dssp EESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESSCGGGH
T ss_pred EEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECCChHHH
Confidence 99999999999999999999999999999999999999 9999999999886 889999999987 99999999999999
Q ss_pred HHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhc-ceEeeccccccc---cchhHHHHHHHHHHHHCCceeeeee
Q 019012 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTK-RITMKGFLQSDY---LHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
..++++++++|+++.+|..... ....+...+..+ .+++.+.....+ +....+.++++++++++|++++.+.
T Consensus 223 ~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~ 297 (325)
T 3jyn_A 223 LTSLDSVAPRGLVVSFGNASGP-----VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGI 297 (325)
T ss_dssp HHHHTTEEEEEEEEECCCTTCC-----CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred HHHHHHhcCCCEEEEEecCCCC-----CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccc
Confidence 9999999999999999976542 223444555555 566655433222 4455677889999999999999988
Q ss_pred cccccccHHHHHHHhhcCcccceEEEEe
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+++++++++|++.+.+++..||+||.+
T Consensus 298 ~~~~l~~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 298 EQYALKDAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp EEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8999999999999999999999999874
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-52 Score=376.55 Aligned_cols=326 Identities=40% Similarity=0.657 Sum_probs=277.3
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
.+++||||+++.+..|.+.+..+.+.+ +|.|+|. ++||||||.+++||++|+..+.+.. ...+|.++|||+.+
T Consensus 4 ~~~~mka~v~~~~~~g~~~~~~l~~~~--~~~P~~~---~~eVlVkv~a~gi~~~d~~~~~~~~--~~~~p~~~G~e~g~ 76 (336)
T 4b7c_A 4 TSQINRQYQLAQRPSGLPGRDTFSFVE--TPLGEPA---EGQILVKNEYLSLDPAMRGWMNDAR--SYIPPVGIGEVMRA 76 (336)
T ss_dssp --CEEEEEEECSCCSSSCCTTSEEEEE--EECCCCC---TTCEEEEEEEEECCTHHHHHHSCSC--CSSCCCCTTSBCCC
T ss_pred CcccccEEEEEecCCCCCCCCceEEEe--ccCCCCC---CCEEEEEEEEEEeCHHHHhhhhccc--ccCCCCCCCcccCC
Confidence 346799999998655766667777755 6777674 9999999999999999998777632 34568899998543
Q ss_pred --ceEEEEeccCCCCCCCCCEEEEecCcceeEEeeccccceecCCCCCCChhh-hh--hhcCChhhhHHHHHHhhcCCCC
Q 019012 83 --FGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIPLSY-HI--GLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 83 --~g~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~-~~--a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+|+|++ +++++|++||||++.|+|+||+++|++. ++++ |++ +++ ++ |+++++++|||+++.+.+++++
T Consensus 77 ~~~G~V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~~a~a~l~~~~~tA~~al~~~~~~~~ 149 (336)
T 4b7c_A 77 LGVGKVLV--SKHPGFQAGDYVNGALGVQDYFIGEPKG-FYKV-DPS---RAPLPRYLSALGMTGMTAYFALLDVGQPKN 149 (336)
T ss_dssp EEEEEEEE--ECSTTCCTTCEEEEECCSBSEEEECCTT-CEEE-CTT---TSCGGGGGTTTSHHHHHHHHHHHHTTCCCT
T ss_pred ceEEEEEe--cCCCCCCCCCEEeccCCceEEEEechHH-eEEc-CCC---CCchHHHhhhcccHHHHHHHHHHHhcCCCC
Confidence 236666 5689999999999999999999999998 9999 998 644 34 7899999999999988899999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHH-HHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL-KNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
|++|||+|++|++|++++|+++..|++|+++++++++.+.+ + ++|++.++|+++. ++.+.+++.+++++|++|||+|
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCC
Confidence 99999999999999999999999999999999999999999 6 9999999999886 8889999998669999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCC-CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHD-PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVE 315 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~ 315 (347)
++.+..++++++++|+++.+|......... .....+...++.+++++.|+....+.....+.++++++++++|.+++.+
T Consensus 228 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 307 (336)
T 4b7c_A 228 GEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSRE 307 (336)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCE
T ss_pred cchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence 999999999999999999999765321000 1123455678889999999987766555678899999999999999999
Q ss_pred ecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 316 DMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 316 ~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
..+++++++++||+.+.+++..||+||++
T Consensus 308 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 308 DIVEGLETFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp EEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred eeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 88899999999999999999889999975
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=382.01 Aligned_cols=321 Identities=21% Similarity=0.291 Sum_probs=273.2
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
++.+|||+++.++ |.++ .+.+ .++|.|.|. ++||+|||.|++||++|++.+.|.+.....+|.++|||++|
T Consensus 19 ~~~~Mka~~~~~~--g~~~--~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G 89 (354)
T 2j8z_A 19 YFQSMLAVHFDKP--GGPE--NLYV--KEVAKPSPG---EGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASG 89 (354)
T ss_dssp --CEEEEEEESSC--SSGG--GEEE--EEEECCCCC---TTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEE
T ss_pred chhheeEEEEccC--CCcc--ceEE--eecCCCCCC---CCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEE
Confidence 5678999999988 7664 3444 557777774 99999999999999999999888654333468999999888
Q ss_pred ceEEEEeccCC-CCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC
Q 019012 83 FGVSKVVDSDN-PNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 83 ~g~v~~vg~~v-~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+|+++|++| ++|++||+|+++ |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++
T Consensus 90 --~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~---ls~~~aa~l~~~~~tA~~al~~~~~~~~ 162 (354)
T 2j8z_A 90 --HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGL-LMPI-PEG---LTLTQAAAIPEAWLTAFQLLHLVGNVQA 162 (354)
T ss_dssp --EEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTT---CCHHHHTTSHHHHHHHHHHHTTTSCCCT
T ss_pred --EEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHH-cEEC-CCC---CCHHHHHhccchHHHHHHHHHHhcCCCC
Confidence 999999999 999999999987 8999999999998 9999 999 8886 77899999999999988889999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCC
Confidence 999999999999999999999999999999999999999998 9999999999876 788888888876 8999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccch-HHHhhcceEeeccccccccchh-----HHHHHHHHHHHHCC-
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL-FTLVTKRITMKGFLQSDYLHLY-----PRFLDYVISNYKQG- 309 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g- 309 (347)
+..+..++++++++|+++.+|..... ....+. ..++.+++++.|+........+ .+.++++++++++|
T Consensus 241 ~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 315 (354)
T 2j8z_A 241 GSYWEKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEG 315 (354)
T ss_dssp GGGHHHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC--
T ss_pred chHHHHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999975432 123445 6678899999998765432211 22345688999999
Q ss_pred --ceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 310 --KIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 310 --~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
.+++.+..+|+|+++++|++.+.+++..||+||++++
T Consensus 316 ~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 354 (354)
T 2j8z_A 316 PQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ 354 (354)
T ss_dssp -CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred CccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 9999888999999999999999988878999998753
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-52 Score=380.04 Aligned_cols=314 Identities=22% Similarity=0.237 Sum_probs=268.1
Q ss_pred ccceEEEecccCCCC-CCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 6 ENKQVIFRGYIEGAP-KETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
+|||++++++ |.. .+..+.+ .++|.|+|. ++||||||.+++||++|++.+.|. ...+|.++|||++|
T Consensus 2 ~MkA~~~~~~--G~~~~~~~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G-- 69 (346)
T 3fbg_A 2 SLKAIGFEQP--FKLSDGNLFKT--FNLDIPEPK---VHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIG-- 69 (346)
T ss_dssp CEEEEEBSSC--CCGGGCCCCEE--EEECCCCCC---TTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEE--
T ss_pred CcEEEEEEec--cccCCCceeEe--ccccCCCCC---CCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEE--
Confidence 5899999998 732 1235555 457777774 999999999999999999988875 25679999999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC-
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK- 156 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~- 156 (347)
+|+++|+++++|++||+|+++ |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++.+.++++
T Consensus 70 ~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 144 (346)
T 3fbg_A 70 VVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERL-VAKA-PKN---ISAEQAVSLPLTGITAYETLFDVFGISR 144 (346)
T ss_dssp EEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGG-EEEC-CSS---SCHHHHTTSHHHHHHHHHHHHTTSCCCS
T ss_pred EEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHH-eEEC-CCC---CCHHHhhhcchhHHHHHHHHHHhcCCcc
Confidence 999999999999999999985 8999999999998 9999 999 8886 7888899999999998888998
Q ss_pred -----CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 157 -----SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 157 -----~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
+|++|||+||+|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++ ++.+.+++..++++|++
T Consensus 145 ~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 145 NRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYV 221 (346)
T ss_dssp SHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEE
T ss_pred ccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEE
Confidence 9999999998999999999999999999999999999999999 999999999986 67788888844499999
Q ss_pred EeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-------cchhHHHHHHHH
Q 019012 232 FDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-------LHLYPRFLDYVI 303 (347)
Q Consensus 232 id~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 303 (347)
|||+|+. .++.++++++++|+++.++... ...+...+..+++++.++..... .....+.+++++
T Consensus 222 ~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (346)
T 3fbg_A 222 FCTFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDIT 293 (346)
T ss_dssp EESSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHH
T ss_pred EECCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHH
Confidence 9999985 5799999999999999887522 23445566778888887654321 223467899999
Q ss_pred HHHHCCceeeeeeccc---ccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 304 SNYKQGKIVYVEDMNE---GLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 304 ~~l~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
+++++|++++.+..++ +++++++|++.+.+++..||+||+++++
T Consensus 294 ~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~ 340 (346)
T 3fbg_A 294 NKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEG 340 (346)
T ss_dssp HHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC---
T ss_pred HHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCc
Confidence 9999999999988777 8999999999999999999999998763
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-52 Score=377.54 Aligned_cols=316 Identities=24% Similarity=0.371 Sum_probs=271.4
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
.+|||+++.++ |.+. .+.+. .++|.|.|. ++||+|||.|++||++|++.+.|.+.....+|.++|||++|
T Consensus 28 ~~Mka~~~~~~--g~~~--~l~~~-~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G-- 97 (351)
T 1yb5_A 28 KLMRAVRVFEF--GGPE--VLKLR-SDIAVPIPK---DHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAG-- 97 (351)
T ss_dssp CEEEEEEESSC--SSGG--GEEEE-EEEECCCCC---TTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEE--
T ss_pred ceEEEEEEccC--CCcc--eeEEe-eecCCCCCC---CCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEE--
Confidence 46999999988 7663 34441 457777774 99999999999999999998888653334568999999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGE 159 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~ 159 (347)
+|+++|+++++|++||||++. |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++|+
T Consensus 98 ~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~---l~~~~aA~l~~~~~ta~~al~~~~~~~~g~ 172 (351)
T 1yb5_A 98 VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEK---LDFKQGAAIGIPYFTAYRALIHSACVKAGE 172 (351)
T ss_dssp EEEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTT---SCHHHHTTTHHHHHHHHHHHHTTSCCCTTC
T ss_pred EEEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHH-eEEC-CCC---CCHHHHHhhhhHHHHHHHHHHHhhCCCCcC
Confidence 999999999999999999986 8999999999998 9999 999 8886 7789999999999997788999999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~ 238 (347)
+|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||+|+.
T Consensus 173 ~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G~~ 250 (351)
T 1yb5_A 173 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANV 250 (351)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCChH
Confidence 9999999999999999999999999999999999999998 9999999999876 788888888876 899999999998
Q ss_pred hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeeec
Q 019012 239 MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
.+..++++++++|+++.+|.... ...+...++.+++++.|+..... +....+.++.+.+++.+|.+++.+..
T Consensus 251 ~~~~~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~ 323 (351)
T 1yb5_A 251 NLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGS 323 (351)
T ss_dssp HHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred HHHHHHHhccCCCEEEEEecCCC-------CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccce
Confidence 89999999999999999986321 23344567889999998865332 34456667788889999999999989
Q ss_pred ccccccHHHHHHH-hhcCcccceEEEEe
Q 019012 318 NEGLENAPAAFVG-LFSGKNVGKQVVRV 344 (347)
Q Consensus 318 ~~~l~~~~~a~~~-~~~~~~~gk~vv~~ 344 (347)
+|+|+++++|++. +.+++..||+||++
T Consensus 324 ~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 324 QYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp EEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred EEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 9999999999998 66666778999864
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-52 Score=382.05 Aligned_cols=322 Identities=24% Similarity=0.333 Sum_probs=264.2
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
++|||++++++ |.++ ++.+ .+.|.|+|. ++||+|||.+++||++|++.+.|.+.....+|.++|||++|
T Consensus 2 m~mka~~~~~~--g~~~--~l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G-- 70 (349)
T 4a27_A 2 MEMRAVVLAGF--GGLN--KLRL--FRKAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSG-- 70 (349)
T ss_dssp CCEEEEEECSS--SSGG--GEEE--EEECCCCCC---TTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEE--
T ss_pred ceeEEEEEccC--CCcc--eeEE--EecCCCCCC---CCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEE--
Confidence 46899999998 7764 3444 557778774 99999999999999999999998765456679999999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCE
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEY 160 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~ 160 (347)
+|+++|+++++|++||+|+++ |+|+||+.++++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++|++
T Consensus 71 ~V~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~ 145 (349)
T 4a27_A 71 IVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEF-VYKI-PDD---MSFSEAAAFPMNFVTAYVMLFEVANLREGMS 145 (349)
T ss_dssp EEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTT---SCHHHHHTSHHHHHHHHHHHHTTSCCCTTCE
T ss_pred EEEEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHH-eEEC-CCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCE
Confidence 999999999999999999987 8999999999998 9999 999 8886 77888999999999988899999999
Q ss_pred EEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
|||+|++|++|++++|+|+.+| ++|++++ ++++.+.++ +|+++++| ++. ++.+.+++.+++++|++|||+|++.
T Consensus 146 VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~ 220 (349)
T 4a27_A 146 VLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCGDN 220 (349)
T ss_dssp EEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC---
T ss_pred EEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCchh
Confidence 9999999999999999999996 5999988 566767665 89999999 554 8889999988779999999999988
Q ss_pred HHHHHHhhhcCCeEEEEcccccccCCC-----------CCCccchHHHhhcceEeeccccccc------cchhHHHHHHH
Q 019012 240 LDAALLNMRDHGRIAVCGMVSLHSYHD-----------PQGIHNLFTLVTKRITMKGFLQSDY------LHLYPRFLDYV 302 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 302 (347)
++.++++++++|+++.+|......... .....+...++.++.++.++....+ .....+.++++
T Consensus 221 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 300 (349)
T 4a27_A 221 TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKL 300 (349)
T ss_dssp ----CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHH
Confidence 899999999999999999754211000 0012445667888899988775432 12337789999
Q ss_pred HHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 303 ISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 303 ~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
++++++|++++.+..+++++++++|++.+.+++..||+||+++++
T Consensus 301 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~ 345 (349)
T 4a27_A 301 IGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345 (349)
T ss_dssp HHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred HHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 999999999999999999999999999999999999999998864
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-52 Score=376.78 Aligned_cols=311 Identities=19% Similarity=0.293 Sum_probs=267.9
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC-CCCCCCCCCCceec
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS-SYIPPFVPGQPVEG 82 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~-~~~~p~i~G~e~~G 82 (347)
+.+|||+++.++ |++ +.+ .++|.|+|. ++||||||.+++||++|++.+.|.+.. ...+|.++|||++|
T Consensus 5 ~~~mka~~~~~~--~~~----l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G 73 (343)
T 3gaz_A 5 TPTMIAAVVEEA--NGP----FVL--RKLARPQPA---PGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAG 73 (343)
T ss_dssp -CEEEEEEECST--TCC----EEE--EEEECCCCC---TTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEE
T ss_pred chhheEEEEecC--CCc----eEE--EeccCCCCC---CCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEE
Confidence 578999999997 654 455 457777774 999999999999999999998886422 24579999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe--------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhc
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL--------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVC 153 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~ 153 (347)
+|+++|+++++|++||+|+++ |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++.+.+
T Consensus 74 --~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~aa~l~~~~~ta~~~l~~~~ 146 (343)
T 3gaz_A 74 --TVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARL-LASK-PAA---LTMRQASVLPLVFITAWEGLVDRA 146 (343)
T ss_dssp --EEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGG-EEEC-CTT---SCHHHHHTSHHHHHHHHHHHTTTT
T ss_pred --EEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHH-eeeC-CCC---CCHHHHHHhhhhHHHHHHHHHHhc
Confidence 999999999999999999986 7999999999998 9999 999 8886 7788899999999998889
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEE
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYF 232 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vi 232 (347)
++++|++|||+||+|++|++++|+|+..|++|+++ .+++++++++ ++|++. +| +.. ++.+.+++.+++ ++|++|
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEE
Confidence 99999999999999999999999999999999999 7888999999 999988 78 554 788889988887 999999
Q ss_pred eCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc------ccchhHHHHHHHHHHH
Q 019012 233 DNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD------YLHLYPRFLDYVISNY 306 (347)
Q Consensus 233 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 306 (347)
||+|++.+..++++++++|+++.+|... ..+...+..+++++.++.... .+....+.++++++++
T Consensus 222 d~~g~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 292 (343)
T 3gaz_A 222 DTLGGPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALV 292 (343)
T ss_dssp ESSCTHHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999998643 224456778899998865432 1233457899999999
Q ss_pred HCCceeeeee-cccccccHHHHHHHhhcCcc----cceEEEEecC
Q 019012 307 KQGKIVYVED-MNEGLENAPAAFVGLFSGKN----VGKQVVRVAC 346 (347)
Q Consensus 307 ~~g~i~~~~~-~~~~l~~~~~a~~~~~~~~~----~gk~vv~~~~ 346 (347)
++|.+++.+. .+++|+++++|++.+.+++. .||+|++++.
T Consensus 293 ~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~ 337 (343)
T 3gaz_A 293 QTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG 337 (343)
T ss_dssp HTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred HCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence 9999999888 68999999999999998764 5799998764
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-52 Score=378.69 Aligned_cols=317 Identities=18% Similarity=0.183 Sum_probs=269.7
Q ss_pred cccccceEEEecccCCC-CCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCcee
Q 019012 3 EQVENKQVIFRGYIEGA-PKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVE 81 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~-~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~ 81 (347)
+|++|||++++++ +. ..+..+.+. ++|.|+|. ++||+|||.+++||++|++.+.|.+. ...+|.++|||++
T Consensus 19 ~m~~MkA~~~~~~--~~~~~~~~l~~~--~~p~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~ 90 (363)
T 4dvj_A 19 YFQSMKAVGYNKP--APITDDASLLDI--ELPKPAPA---GHDILVEVKAVSVNPVDYKVRRSTPP-DGTDWKVIGYDAA 90 (363)
T ss_dssp CCCEEEEEEBSSC--CCTTSTTSSEEE--EEECCCCC---TTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEE
T ss_pred hhheeEEEEEecc--CCCCCCceEEEe--ecCCCCCC---CCEEEEEEEEEEeCHHHHHHHcCCCC-CCCCCCcccceeE
Confidence 4567999999987 43 223456664 57777774 99999999999999999999988653 2456899999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcC
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCS 154 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~ 154 (347)
| +|+++|++|++|++||+|+++ |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++.+.++
T Consensus 91 G--~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~al~~~~~ 163 (363)
T 4dvj_A 91 G--IVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERI-VGRK-PKT---LDWAEAAALPLTSITAWEAFFDRLD 163 (363)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGG-CEEC-CTT---SCHHHHHTSHHHHHHHHHHHHTTSC
T ss_pred E--EEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHH-eeEC-CCC---CCHHHHHhhhhHHHHHHHHHHHhhC
Confidence 8 999999999999999999985 7999999999998 9999 999 8886 78888889999999988888
Q ss_pred CC-----CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCc
Q 019012 155 PK-----SGEYVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 155 ~~-----~~~~vLI~Ga~g~~G~~ai~la~~-~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
++ +|++|||+||+|++|++++|+|+. .|++|+++++++++.++++ ++|+++++|+++ ++.+.++++.++++
T Consensus 164 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~ 240 (363)
T 4dvj_A 164 VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAP 240 (363)
T ss_dssp TTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCE
T ss_pred cCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCc
Confidence 88 899999999999999999999998 5889999999999999999 999999999976 67888888855599
Q ss_pred cEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-------cchhHHHHH
Q 019012 229 DIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-------LHLYPRFLD 300 (347)
Q Consensus 229 d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 300 (347)
|++|||+|+. .++.++++++++|+++.+|.. ...+...+..+++++.++..... .....+.++
T Consensus 241 Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---------~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T 4dvj_A 241 AFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---------SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLN 311 (363)
T ss_dssp EEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---------SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHH
T ss_pred eEEEECCCchhhHHHHHHHhcCCCEEEEECCC---------CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHH
Confidence 9999999975 889999999999999999642 13445567788888887654321 122357899
Q ss_pred HHHHHHHCCceeeeeeccc---ccccHHHHHHHhhcCcccceEEEEecC
Q 019012 301 YVISNYKQGKIVYVEDMNE---GLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 301 ~~~~~l~~g~i~~~~~~~~---~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
++++++++|++++.+..++ +++++++|++.+.+++..||+||++..
T Consensus 312 ~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~ 360 (363)
T 4dvj_A 312 DVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG 360 (363)
T ss_dssp HHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred HHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence 9999999999999887765 999999999999999999999998753
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=374.12 Aligned_cols=306 Identities=24% Similarity=0.325 Sum_probs=269.0
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+|||++++++ |.+ +.+ .++|.|+|. ++||||||.+++||++|++.++|.+.....+|.++|||++| +
T Consensus 2 ~MkA~~~~~~--g~~----l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G--~ 68 (340)
T 3s2e_A 2 MMKAAVVRAF--GAP----LTI--DEVPVPQPG---PGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVG--Y 68 (340)
T ss_dssp EEEEEEBCST--TSC----CEE--EEEECCCCC---TTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEE--E
T ss_pred ceEEEEEecC--CCC----CEE--EEccCCCCC---CCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceE--E
Confidence 4899999987 644 455 457777774 99999999999999999999999765445679999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh
Q 019012 86 SKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
|+++|+++++|++||||+. .|+|+||+++|++. ++++ |++ ++++
T Consensus 69 V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~ 143 (340)
T 3s2e_A 69 VSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY-VGLL-PDK---VGFV 143 (340)
T ss_dssp EEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTT---SCHH
T ss_pred EEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHH-EEEC-CCC---CCHH
Confidence 9999999999999999942 28999999999998 9999 999 8886
Q ss_pred -hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 -IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 -~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
+|+++.++.|||+++ +..++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ ++|+++++|+++.
T Consensus 144 ~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~~ 220 (340)
T 3s2e_A 144 EIAPILCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNARDT 220 (340)
T ss_dssp HHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred HhhcccchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEeCCCc
Confidence 788999999999999 6689999999999996 99999999999999999999999999999999 9999999999886
Q ss_pred HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
++.+.+++ +.+++|++||++|+ +.++.++++++++|+++.+|..... ...+...++.+++++.|+....
T Consensus 221 -~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~-- 290 (340)
T 3s2e_A 221 -DPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD------FGTPIFDVVLKGITIRGSIVGT-- 290 (340)
T ss_dssp -CHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSE------EEEEHHHHHHTTCEEEECCSCC--
T ss_pred -CHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCC------CCCCHHHHHhCCeEEEEEecCC--
Confidence 88888888 43489999999985 6899999999999999999875431 2445677888999999988765
Q ss_pred chhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 293 HLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
.+.++++++++++|++++.+. .++|+++++|++.+.+++..||+||++++
T Consensus 291 ---~~~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 291 ---RSDLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp ---HHHHHHHHHHHHTTSCCCCEE-EECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred ---HHHHHHHHHHHHhCCCCceEE-EEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 677999999999999998754 56999999999999999999999999874
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=374.81 Aligned_cols=305 Identities=21% Similarity=0.229 Sum_probs=266.7
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++.. ++ +.+++ .+.|.|+|. |+||||||.|+|||++|+++++|.+. ..+|.++|||++| +|
T Consensus 1 MKA~v~~~~--~~---~~~~l--~e~~~P~~~---p~eVLVkv~a~gic~~D~~~~~G~~~--~~~p~i~GhE~aG--~V 66 (348)
T 4eez_A 1 MKAAVVRHN--PD---GYADL--VEKELRAIK---PNEALLDMEYCGVCHTDLHVAAGDFG--NKAGTVLGHEGIG--IV 66 (348)
T ss_dssp CEEEEECSS--CC---SSEEE--EECCCCCCC---TTEEEEEEEEEECCHHHHHHHTTTTC--CCTTCBCCSEEEE--EE
T ss_pred CeEEEEEcC--CC---CcEEE--EEeECCCCC---CCEEEEEEEEEEECHHHHHHhcCCCC--CCCCcccceeEEE--EE
Confidence 799999764 22 23455 457778775 99999999999999999999998763 4579999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+++|++|++|++||||++. |+|+||+.++++. ++++ |++ ++++
T Consensus 67 ~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~-~~~i-P~~---~~~~~ 141 (348)
T 4eez_A 67 KEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADY-AVKV-PDG---LDPIE 141 (348)
T ss_dssp EEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-SCBC-CTT---SCHHH
T ss_pred EEECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccc-eeec-CCC---CCHHH
Confidence 9999999999999999752 7899999999998 9999 999 8885
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
+|+++.+++|||+++ +.+++++|++|||+|+ |++|.+++|+|+.. |++|++++++++|++.++ ++|+++++|+++.
T Consensus 142 aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~~~~~ 218 (348)
T 4eez_A 142 ASSITCAGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTINSGDV 218 (348)
T ss_dssp HHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEEEC-CC
T ss_pred HhhcccceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEEeCCCC
Confidence 889999999999999 5688999999999997 99999999999877 669999999999999999 9999999999987
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
++.+++++.+++ ++|++++++++ ..+..++++++++|+++.+|.+... ...+...++.+++++.|+...+
T Consensus 219 -~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~gs~~~~- 290 (348)
T 4eez_A 219 -NPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTE------MTLSVPTVVFDGVEVAGSLVGT- 290 (348)
T ss_dssp -CHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCE------EEECHHHHHHSCCEEEECCSCC-
T ss_pred -CHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCC------CccCHHHHHhCCeEEEEEecCC-
Confidence 899999999998 99999999986 5799999999999999999875432 3456678899999999988766
Q ss_pred cchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 292 LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
.+.++++++++++|++++.+ .+++|+++++|++.+++++..||+||+++.
T Consensus 291 ----~~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 291 ----RLDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp ----HHHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred ----HHHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 66789999999999999765 578999999999999999999999999863
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=375.75 Aligned_cols=328 Identities=26% Similarity=0.394 Sum_probs=275.4
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
++.+|||++++++ |.+....+.+. .++|.|+|. ++||||||.|++||++|++.+.|.+.....+|.++|||++|
T Consensus 20 ~~~~MkA~~~~~~--g~~~~~~l~~~-~~~p~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G 93 (362)
T 2c0c_A 20 FQSMMQKLVVTRL--SPNFREAVTLS-RDCPVPLPG---DGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIG 93 (362)
T ss_dssp HCCEEEEEEECSC--CSSHHHHEEEE-EEEECCCCC---TTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEE
T ss_pred chhhceEEEEeec--CCCccceeEEE-eecCCCCCC---CCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEE
Confidence 4567999999998 64311123440 457778774 99999999999999999999988654334579999999888
Q ss_pred ceEEEEeccCCC-CCCCCCEEEEe--cCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCC
Q 019012 83 FGVSKVVDSDNP-NFKPGDLVAGL--TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGE 159 (347)
Q Consensus 83 ~g~v~~vg~~v~-~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~ 159 (347)
+|+++|++|+ +|++||||+++ |+|+||+++|++. ++++ |+. . .++|+++.+++|||+++.+.+++++|+
T Consensus 94 --~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~~-P~~---~-~~aaal~~~~~ta~~al~~~~~~~~g~ 165 (362)
T 2c0c_A 94 --EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI-ATPV-PSV---K-PEYLTLLVSGTTAYISLKELGGLSEGK 165 (362)
T ss_dssp --EEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGG-CEEC-SSS---C-HHHHTTTTHHHHHHHHHHHHTCCCTTC
T ss_pred --EEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHH-eEEC-CCC---c-hHhhcccchHHHHHHHHHHhcCCCCCC
Confidence 9999999999 99999999986 9999999999998 9999 987 4 468899999999999998888999999
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++++|++|||+|+..
T Consensus 166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~ 243 (362)
T 2c0c_A 166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAM 243 (362)
T ss_dssp EEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTHH
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHHH
Confidence 9999999999999999999999999999999999999999 8999999999876 7888888887558999999999989
Q ss_pred HHHHHHhhhcCCeEEEEcccccccCCCC---CC-ccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeee
Q 019012 240 LDAALLNMRDHGRIAVCGMVSLHSYHDP---QG-IHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVE 315 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~ 315 (347)
++.++++++++|+++.+|.......... .. ......++.+++++.|+....+.....+.++++++++++|++++.+
T Consensus 244 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 323 (362)
T 2c0c_A 244 FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 323 (362)
T ss_dssp HHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCE
T ss_pred HHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeee
Confidence 9999999999999999997654211000 00 0113567888999999876554444567899999999999999876
Q ss_pred e--------cccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 316 D--------MNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 316 ~--------~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
. ..++|+++++|++.+.+++..||+||++++
T Consensus 324 ~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 362 (362)
T 2c0c_A 324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH 362 (362)
T ss_dssp ECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred ccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence 5 456999999999999988888999998864
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-51 Score=379.70 Aligned_cols=314 Identities=21% Similarity=0.274 Sum_probs=268.3
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
|+.+|||++++++ +++ +.++ ++|.|+|. ++||||||.+++||++|++.+.|.+. ...+|.++|||++|
T Consensus 5 ~~~tmkA~v~~~~--~~~----l~~~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G 72 (378)
T 3uko_A 5 QVITCKAAVAYEP--NKP----LVIE--DVQVAPPQ---AGEVRIKILYTALCHTDAYTWSGKDP-EGLFPCILGHEAAG 72 (378)
T ss_dssp SCEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEE
T ss_pred cceeeEEEEEecC--CCc----cEEE--EecCCCCC---CCeEEEEEEEeecCHHHHHHhcCCCC-CCCCCccCCccceE
Confidence 5678999999998 654 4564 46777664 99999999999999999999988642 34579999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe----------------------------------------------------cCcce
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL----------------------------------------------------TGWEE 110 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~ 110 (347)
+|+++|++|++|++||||++. |+|+|
T Consensus 73 --~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae 150 (378)
T 3uko_A 73 --IVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQ 150 (378)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBS
T ss_pred --EEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEe
Confidence 999999999999999999853 48999
Q ss_pred eEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q 019012 111 YSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGS 188 (347)
Q Consensus 111 ~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~ 188 (347)
|++++++. ++++ |++ ++++ +|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 151 y~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~ 224 (378)
T 3uko_A 151 YTVVHDVS-VAKI-DPT---APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGI 224 (378)
T ss_dssp EEEEEGGG-EEEC-CTT---SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEE
T ss_pred EEEechhh-eEEC-CCC---CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 99999998 9999 999 8886 78889999999999988899999999999997 9999999999999999 89999
Q ss_pred ECChHhHHHHHHHcCCCeeeecC--CHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccC
Q 019012 189 AGSSQKVDLLKNKLGFDEAFNYN--DETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSY 264 (347)
Q Consensus 189 ~~~~~~~~~~~~~~g~~~vi~~~--~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 264 (347)
+++++|+++++ ++|+++++|++ +. ++.+.+++++++++|++|||+|+ ..++.++++++++ |+++.+|.....
T Consensus 225 ~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~-- 300 (378)
T 3uko_A 225 DIDSKKYETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-- 300 (378)
T ss_dssp CSCTTHHHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT--
T ss_pred cCCHHHHHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCC--
Confidence 99999999999 99999999987 44 78899999998899999999998 5899999999996 999999975431
Q ss_pred CCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEE
Q 019012 265 HDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
.........++. +.++.|+....+. ..+.++++++++.+|++++ .+..+++|+++++||+.+.+++.. |+||
T Consensus 301 --~~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi 374 (378)
T 3uko_A 301 --QEISTRPFQLVT-GRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVL 374 (378)
T ss_dssp --CCEEECTHHHHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEE
T ss_pred --CccccCHHHHhc-CcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEE
Confidence 112233344444 7888887665432 2567899999999999885 477788999999999999988865 9999
Q ss_pred EecC
Q 019012 343 RVAC 346 (347)
Q Consensus 343 ~~~~ 346 (347)
++++
T Consensus 375 ~~~~ 378 (378)
T 3uko_A 375 DTSK 378 (378)
T ss_dssp ETTC
T ss_pred ecCC
Confidence 9864
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-51 Score=375.86 Aligned_cols=321 Identities=17% Similarity=0.168 Sum_probs=263.9
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
|.|+.+|||++++++ + .+.++ .++|.|++. ++||||||.+++||++|++.+.+. ..+|.++|||+
T Consensus 6 m~~p~~mkA~v~~~~--~-----~l~~~-~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~ 70 (371)
T 3gqv_A 6 FIPPPQQTALTVNDH--D-----EVTVW-NAAPCPMLP---RDQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDY 70 (371)
T ss_dssp CCCCSCEEEEEECTT--S-----CEEEE-EEECCCCCC---TTSEEEEEEEEECCGGGGC---------CCTTSCCCSEE
T ss_pred CCCchhceeEEEcCC--C-----ceEEe-ccCCCCCCC---CCEEEEEEEEEEcCHHHHHHhhcC----CCCCccCcccc
Confidence 667889999999986 3 34554 157778774 999999999999999999888762 35699999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEEe-----------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHH
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAGL-----------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAG 148 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~a 148 (347)
+| +|+++|++|++|++||||++. |+|+||++++++. ++++ |++ ++++ +|+++.+++|||++
T Consensus 71 ~G--~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~aa~~~~~~~ta~~~ 143 (371)
T 3gqv_A 71 AG--TVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRV-WAKI-PKG---LSFEQAAALPAGISTAGLA 143 (371)
T ss_dssp EE--EEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTC-EEEC-CTT---CCHHHHHTSHHHHHHHHHH
T ss_pred EE--EEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhh-eEEC-CCC---CCHHHHhhhhhhHHHHHHH
Confidence 88 999999999999999999976 7999999999998 9999 999 8886 77888889999999
Q ss_pred HHhh-cCC-----------CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHH
Q 019012 149 FHEV-CSP-----------KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDL 216 (347)
Q Consensus 149 l~~~-~~~-----------~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~ 216 (347)
+.+. .++ ++|++|||+||+|++|++++|+|+..|++|++++ +++|+++++ ++|+++++|+++. ++
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~ 220 (371)
T 3gqv_A 144 MKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NL 220 (371)
T ss_dssp HHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-TH
T ss_pred HHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hH
Confidence 9776 553 8999999999999999999999999999999997 788999999 9999999999987 89
Q ss_pred HHHHHHHCCCCccEEEeCCCh-hhHHHHHHhh-hcCCeEEEEcccccccCCCCCCc---cchHHHhhcceEeeccccccc
Q 019012 217 VAALKRCFPQGIDIYFDNVGG-EMLDAALLNM-RDHGRIAVCGMVSLHSYHDPQGI---HNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 217 ~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 291 (347)
.+.+++++++++|++|||+|+ ..++.+++++ +++|+++.+|............. .....++.+++++.|++....
T Consensus 221 ~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~ 300 (371)
T 3gqv_A 221 AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPG 300 (371)
T ss_dssp HHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCC
T ss_pred HHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccc
Confidence 999999998889999999998 5799999999 58999999996543110000011 123467788999998865432
Q ss_pred -c---chhHHHHHHHHHHHHCCceeeeeecc--cccccHHHHHHHhhcCcccc-eEEEEecC
Q 019012 292 -L---HLYPRFLDYVISNYKQGKIVYVEDMN--EGLENAPAAFVGLFSGKNVG-KQVVRVAC 346 (347)
Q Consensus 292 -~---~~~~~~~~~~~~~l~~g~i~~~~~~~--~~l~~~~~a~~~~~~~~~~g-k~vv~~~~ 346 (347)
+ +...++++++++++++|++++.+..+ ++|+++++|++.+.+++..| |+||++++
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~ 362 (371)
T 3gqv_A 301 SEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence 1 22345667899999999999986665 69999999999999998877 56777665
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-52 Score=380.02 Aligned_cols=319 Identities=19% Similarity=0.272 Sum_probs=264.5
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
|+.+|||+++.++ |.|. ..+.+ .+.|.|++. ++||+|||.|+|||++|++.+.|.+.....+|.++|||++|
T Consensus 23 m~~~mka~~~~~~--g~~~-~~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G 94 (357)
T 1zsy_A 23 MPARVRALVYGHH--GDPA-KVVEL--KNLELAAVR---GSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVA 94 (357)
T ss_dssp CCCCEEEEEESSS--SCHH-HHEEE--EEECCCCCC---TTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEE
T ss_pred CchhhEEEEEecC--CCcc-ceEEE--eeccCCCCC---CCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEE
Confidence 5567999999998 7641 11344 557778774 99999999999999999999988653333468999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCC
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+|+++|+++++|++||+|++. |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++
T Consensus 95 --~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~---l~~~~Aa~l~~~~~ta~~~l~~~~~~~~ 167 (357)
T 1zsy_A 95 --QVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEA-LIQV-PSD---IPLQSAATLGVNPCTAYRMLMDFEQLQP 167 (357)
T ss_dssp --EEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGG-EEEE-CSS---SCHHHHHHTTSHHHHHHHHHHHSSCCCT
T ss_pred --EEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHH-cEEC-CCC---CCHHHHhhhcccHHHHHHHHHHHhccCC
Confidence 999999999999999999976 8999999999998 9999 999 8886 78888899999999988789999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----HhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC--CccEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----QKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ--GIDIY 231 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g--~~d~v 231 (347)
|++|||+||+|++|++++|+|+.+|++++++++++ ++.++++ ++|+++++|+++ ...+.+++.+.+ ++|++
T Consensus 168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~~~~~Dvv 244 (357)
T 1zsy_A 168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEE--LRRPEMKNFFKDMPQPRLA 244 (357)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHH--HHSGGGGGTTSSSCCCSEE
T ss_pred CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCc--chHHHHHHHHhCCCCceEE
Confidence 99999999999999999999999999888887653 2567888 999999998754 223455666654 59999
Q ss_pred EeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHH
Q 019012 232 FDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNY 306 (347)
Q Consensus 232 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l 306 (347)
|||+|++....++++++++|+++.+|..... ....+...++.+++++.|++...+ +....+.++++++++
T Consensus 245 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (357)
T 1zsy_A 245 LNCVGGKSSTELLRQLARGGTMVTYGGMAKQ-----PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLI 319 (357)
T ss_dssp EESSCHHHHHHHHTTSCTTCEEEECCCCTTC-----CBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHhhCCCCEEEEEecCCCC-----CCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHH
Confidence 9999988777899999999999999864331 123445567789999999876432 223456789999999
Q ss_pred HCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 307 KQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 307 ~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
++|++++.+..+|+|+++++|++.+.+++..||+||++
T Consensus 320 ~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 320 RRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp HTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred HcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 99999998888899999999999999888778999874
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-52 Score=373.54 Aligned_cols=305 Identities=25% Similarity=0.285 Sum_probs=259.5
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC----CCCCCCCCCCCc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT----SSYIPPFVPGQP 79 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~----~~~~~p~i~G~e 79 (347)
|++|||++++++ |.++ .+.+ .+.|.|+|. ++||||||.|++||++|++.+.|... ....+|.++|||
T Consensus 4 m~~Mka~~~~~~--g~~~--~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E 74 (321)
T 3tqh_A 4 MKEMKAIQFDQF--GPPK--VLKL--VDTPTPEYR---KNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYD 74 (321)
T ss_dssp -CEEEEEEESSS--CSGG--GEEE--EEEECCCCC---TTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCE
T ss_pred cccceEEEEccC--CCcc--eeEE--EecCCCCCC---CCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccce
Confidence 357999999998 7774 4445 557777774 99999999999999999998887311 134569999999
Q ss_pred eecceEEEEeccCCCCCCCCCEEEEe-------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHh
Q 019012 80 VEGFGVSKVVDSDNPNFKPGDLVAGL-------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHE 151 (347)
Q Consensus 80 ~~G~g~v~~vg~~v~~~~~Gd~V~~~-------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~ 151 (347)
++| +|+++|+++++|++||||+++ |+|+||++++++. ++++ |++ ++++ +|+++.+++|||+++ +
T Consensus 75 ~~G--~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~al-~ 146 (321)
T 3tqh_A 75 FSG--EVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDT-IIQK-LEK---LSFLQAASLPTAGLTALQAL-N 146 (321)
T ss_dssp EEE--EEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGG-EEEC-CTT---SCHHHHHHSHHHHHHHHHHH-H
T ss_pred eEE--EEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHH-hccC-CCC---CCHHHHhhhhhHHHHHHHHH-H
Confidence 888 999999999999999999976 7999999999998 9999 999 8886 788888999999999 7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH-HHHHHHHHCCCCccE
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD-LVAALKRCFPQGIDI 230 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~-~~~~i~~~~~g~~d~ 230 (347)
.+++++|++|||+||+|++|++++|+|+..|++|++++ ++++.++++ ++|+++++|+++. + +.+.+ .++|+
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~ 218 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDA 218 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEE
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCE
Confidence 89999999999999899999999999999999999998 556688998 9999999999875 4 44333 36999
Q ss_pred EEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCc
Q 019012 231 YFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 231 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
+|||+|++....++++++++|+++.+|..... .....+..+++++.++.... ..+.++++++++++|.
T Consensus 219 v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~ 286 (321)
T 3tqh_A 219 VIDLVGGDVGIQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQF----NIEELHYLGKLVSEDK 286 (321)
T ss_dssp EEESSCHHHHHHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCCC----CHHHHHHHHHHHHTTS
T ss_pred EEECCCcHHHHHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecCC----CHHHHHHHHHHHHCCC
Confidence 99999998789999999999999999864321 12234567888888854322 2577999999999999
Q ss_pred eeeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 311 IVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 311 i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
+++.+..+++++++++||+.+.+++..||+||+++
T Consensus 287 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 287 LRIEISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp SCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cccccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 99999999999999999999999999999999874
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=373.02 Aligned_cols=317 Identities=21% Similarity=0.286 Sum_probs=269.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCC-CCC-CCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF-TSS-YIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~-~~~-~~~p~i~G~e~~G~g 84 (347)
|||++++++ |.+. .+.+ .+.|.|+|. ++||||||.|++||++|++.+.|.+ ... ..+|.++|||++|
T Consensus 2 Mka~~~~~~--g~~~--~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G-- 70 (333)
T 1wly_A 2 VMAAVIHKK--GGPD--NFVW--EEVKVGSPG---PGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAA-- 70 (333)
T ss_dssp CEEEEESSC--SSGG--GEEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEE--
T ss_pred cEEEEEccc--CCcc--eeEE--EeccCCCCC---CCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEE--
Confidence 799999998 7664 4445 567888774 9999999999999999999988854 111 3468999999888
Q ss_pred EEEEeccCCCCCCCCCEEEE----ecCcceeEEeeccccceecCCCCCCChhhh---hhhcCChhhhHHHHHHhhcCCCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAG----LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH---IGLLGMPGFTAYAGFHEVCSPKS 157 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~----~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~---~a~l~~~~~ta~~al~~~~~~~~ 157 (347)
+|+++|+++++|++||||++ .|+|+||+++|++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++
T Consensus 71 ~V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~ 145 (333)
T 1wly_A 71 VVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEK-LIKV-PKD---LDLDDVHLAGLMLKGMTAQYLLHQTHKVKP 145 (333)
T ss_dssp EEEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGG-CEEC-CTT---CCCCHHHHHHHHHHHHHHHHHHHTTSCCCT
T ss_pred EEEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHH-cEeC-CCC---CChHHhCccchhhhHHHHHHHHHHhhCCCC
Confidence 99999999999999999987 48999999999998 9999 999 7774 58999999999999987889999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
|++|||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~~g 223 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIG 223 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEECSC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEECCc
Confidence 999999999999999999999999999999999999999998 8999999998876 778888887766 8999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchH-HHhhcc--eEeecccccc--ccchhHHHHHHHHHHHHCCce
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF-TLVTKR--ITMKGFLQSD--YLHLYPRFLDYVISNYKQGKI 311 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~i 311 (347)
+..++.++++++++|+++.+|...+. ....+.. .++.++ +++.|+.... .+....+.++++++++++|.+
T Consensus 224 ~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l 298 (333)
T 1wly_A 224 KDTLQKSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVL 298 (333)
T ss_dssp TTTHHHHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhhccCCEEEEEecCCCC-----cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCc
Confidence 99999999999999999999976432 1233444 677888 9998875422 133335679999999999999
Q ss_pred eeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 312 VYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 312 ~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
++.+..+|+|+++++|++.+.+++..||+||++++
T Consensus 299 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 333 (333)
T 1wly_A 299 HSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA 333 (333)
T ss_dssp CCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred CCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 99988999999999999999988888999998764
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-53 Score=385.04 Aligned_cols=321 Identities=19% Similarity=0.223 Sum_probs=269.1
Q ss_pred CccccccceEEEe--cccCCCCCCCCeEEEE-------eecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCC
Q 019012 1 MMEQVENKQVIFR--GYIEGAPKETDMEIKI-------SGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYI 71 (347)
Q Consensus 1 ~~~~~~~~a~~~~--~~~~g~~~~~~~~~~~-------~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~ 71 (347)
|.++.+|||++++ ++ +.. +..+.+++ .++|.|+|. ++||||||.+++||++|++.++|.+.....
T Consensus 5 m~~p~~mka~~~~~~~~--~~~-~~~l~~~~~~~~~~~~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~ 78 (349)
T 3pi7_A 5 MTIPSEMKALLLVGDGY--TKT-PSGSALEAMEPYLEQGRIAVPAPG---PSQVLIKVNLASINPSDVAFIKGQYGQPRV 78 (349)
T ss_dssp CCCCSEEEEEEECSCBS--CSS-CCCSCCCCSTTTEEEEEEECCCCC---TTEEEEEEEEEECCHHHHHHHTTCSSSCBC
T ss_pred CCCchhheEEEEEcccc--CCC-cccceEEEeecccccccCCCCCCC---CCeEEEEEEEecCCHHHHHHhcccCCCCCC
Confidence 5677889999999 54 321 12344432 223888774 999999999999999999999987644456
Q ss_pred CCCCCCCceecceEEEEeccCC-CCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhh
Q 019012 72 PPFVPGQPVEGFGVSKVVDSDN-PNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGF 143 (347)
Q Consensus 72 ~p~i~G~e~~G~g~v~~vg~~v-~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ 143 (347)
+|.++|||++| +|+++|++| ++|++||+|++. |+|+||++++++. ++++ |++ ++++ +|+++..++
T Consensus 79 ~p~v~G~E~~G--~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ 151 (349)
T 3pi7_A 79 KGRPAGFEGVG--TIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA-CIPL-LDT---VRDEDGAAMIVNPL 151 (349)
T ss_dssp TTSBCCSEEEE--EEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGG-EEEC-CTT---CCC--GGGSSHHHH
T ss_pred CCCCccceEEE--EEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHH-eEEC-CCC---CCHHHHhhccccHH
Confidence 79999999888 999999999 999999999975 8999999999998 9999 999 8886 788899999
Q ss_pred hHHHHHHhhcCCCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH
Q 019012 144 TAYAGFHEVCSPKSG-EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 144 ta~~al~~~~~~~~~-~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
|||+++ +.++ ++| +++||+||+|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++. ++.+.+++
T Consensus 152 ta~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~ 227 (349)
T 3pi7_A 152 TAIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLRE 227 (349)
T ss_dssp HHHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHH
T ss_pred HHHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHH
Confidence 999766 5556 666 79999999999999999999999999999999999999999 9999999999886 89999999
Q ss_pred HCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccch-HHHhhcceEeeccccccc----cchhH
Q 019012 223 CFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL-FTLVTKRITMKGFLQSDY----LHLYP 296 (347)
Q Consensus 223 ~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~ 296 (347)
.+++ ++|++|||+|+..+..++++++++|+++.+|..... ....+. ..++.+++++.|++...+ +....
T Consensus 228 ~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 302 (349)
T 3pi7_A 228 VMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPD-----ATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRG 302 (349)
T ss_dssp HHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCS-----CCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHH
T ss_pred HhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCC-----CCCCCchhhhhccccEEEEEEehhhhhhCcHHHH
Confidence 9887 899999999998889999999999999999975542 123444 678889999999876543 23346
Q ss_pred HHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 297 RFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 297 ~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.++++++++++|++++.+..+++|+++++|++.+. ++..||+||++
T Consensus 303 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p 349 (349)
T 3pi7_A 303 PAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP 349 (349)
T ss_dssp HHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred HHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence 778999999999999999999999999999999554 45668999874
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=373.98 Aligned_cols=310 Identities=25% Similarity=0.324 Sum_probs=270.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |.++ .+.+ .++|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||++| +|
T Consensus 1 Mka~~~~~~--g~~~--~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G--~V 69 (343)
T 2eih_A 1 MRAVVMRAR--GGPE--VLEV--ADLPVPEPG---PKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSG--VV 69 (343)
T ss_dssp CEEEEECSS--SSGG--GEEE--EECCCCCCC---TTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEE--EE
T ss_pred CeEEEEecC--CCCc--eEEE--EecCCCCCC---CCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEE--EE
Confidence 689999998 7653 3444 567888774 99999999999999999999888653223568999999888 99
Q ss_pred EEeccCCCCCCCCCEEE-------E--------------------e---cCcceeEEeeccccceecCCCCCCChhhh-h
Q 019012 87 KVVDSDNPNFKPGDLVA-------G--------------------L---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-I 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~-------~--------------------~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~ 135 (347)
+++|++|++|++||||+ + + |+|+||+++|++. ++++ |++ ++++ +
T Consensus 70 ~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~a 144 (343)
T 2eih_A 70 DAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEAN-LAPK-PKN---LSFEEA 144 (343)
T ss_dssp EEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGG-EEEC-CTT---SCHHHH
T ss_pred EEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHH-eEEC-CCC---CCHHHH
Confidence 99999999999999999 4 2 8999999999998 9999 999 8886 6
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
|+++.+++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. +
T Consensus 145 a~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~ 222 (343)
T 2eih_A 145 AAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHP-D 222 (343)
T ss_dssp HHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTST-T
T ss_pred hhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcCCcc-c
Confidence 6799999999999977679999999999999999999999999999999999999999999998 8999999999876 7
Q ss_pred HHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccch
Q 019012 216 LVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL 294 (347)
Q Consensus 216 ~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
+.+.+++.+++ ++|++||++|++.++.++++++++|+++.+|..... ....+...++.+++++.|+....
T Consensus 223 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~---- 293 (343)
T 2eih_A 223 WPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS---- 293 (343)
T ss_dssp HHHHHHHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC----
T ss_pred HHHHHHHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc----
Confidence 88888888876 899999999988899999999999999999976542 11244456788999999876433
Q ss_pred hHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 295 YPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 295 ~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.++++++++++|++++.+..+|+|+++++|++.+.+++..+|+||++
T Consensus 294 -~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 294 -KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp -GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred -HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 4568999999999999999988999999999999999888788999975
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-51 Score=374.12 Aligned_cols=314 Identities=20% Similarity=0.276 Sum_probs=267.4
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
|..+++|||++++++ |.+ +.++ ++|.|+|. ++||||||.+++||++|++.+.|.+. ..+|.++|||+
T Consensus 1 ms~~~~mka~~~~~~--g~~----l~~~--~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~ 67 (371)
T 1f8f_A 1 MSELKDIIAAVTPCK--GAD----FELQ--ALKIRQPQ---GDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEG 67 (371)
T ss_dssp ---CEEEEEEEBCST--TCC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEE
T ss_pred CCccccceEEEEcCC--CCC----eEEE--EecCCCCC---CCEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCccc
Confidence 566678999999987 543 4554 47777674 99999999999999999999988542 34699999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEE----------------------------------------------------ecCc
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAG----------------------------------------------------LTGW 108 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~----------------------------------------------------~g~~ 108 (347)
+| +|+++|++|++|++||||++ .|+|
T Consensus 68 ~G--~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~ 145 (371)
T 1f8f_A 68 SG--IIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSF 145 (371)
T ss_dssp EE--EEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCS
T ss_pred ce--EEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccc
Confidence 88 99999999999999999985 1789
Q ss_pred ceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q 019012 109 EEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVV 186 (347)
Q Consensus 109 ~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~ 186 (347)
+||++++++. ++++ |++ ++++ +|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus 146 aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi 219 (371)
T 1f8f_A 146 ATYALSRENN-TVKV-TKD---VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIII 219 (371)
T ss_dssp BSEEEEEGGG-EEEE-CTT---SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEE
T ss_pred cCeEEechhh-eEEC-CCC---CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence 9999999998 9999 999 8886 77888999999999987889999999999995 9999999999999999 799
Q ss_pred EEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCC
Q 019012 187 GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYH 265 (347)
Q Consensus 187 ~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 265 (347)
+++++++++++++ ++|+++++|+++. ++.+.+++.+++++|++||++|. ..++.++++++++|+++.+|.....
T Consensus 220 ~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~--- 294 (371)
T 1f8f_A 220 AVDIVESRLELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG--- 294 (371)
T ss_dssp EEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT---
T ss_pred EECCCHHHHHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC---
Confidence 9999999999999 9999999999876 88888999887789999999997 6889999999999999999976431
Q ss_pred CCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeee--eecccccccHHHHHHHhhcCcccceEEEE
Q 019012 266 DPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.....+...++.+++++.|+...... ..+.++++++++++|++++. +.. ++|+++++|++.+.+++. +|+||+
T Consensus 295 -~~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~ 369 (371)
T 1f8f_A 295 -TTAQFDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIK 369 (371)
T ss_dssp -CCCCCCHHHHHHTTCEEEECSGGGSC--HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEE
T ss_pred -CccccCHHHHHhCCCEEEEeCCCCCc--hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEe
Confidence 11234556778899999998764321 24679999999999999863 566 899999999999988775 699998
Q ss_pred ec
Q 019012 344 VA 345 (347)
Q Consensus 344 ~~ 345 (347)
+.
T Consensus 370 ~~ 371 (371)
T 1f8f_A 370 IA 371 (371)
T ss_dssp CC
T ss_pred eC
Confidence 63
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-51 Score=373.40 Aligned_cols=304 Identities=19% Similarity=0.244 Sum_probs=261.1
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCC-CCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCce
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKA-PKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPV 80 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~-~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~ 80 (347)
+.+|||++++++ |.+ +.+ .++|.|+ |. ++||||||.|++||++|++.+.|.+.. ...+|.++|||+
T Consensus 13 ~~~mka~~~~~~--g~~----l~~--~~~p~P~~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~ 81 (359)
T 1h2b_A 13 VERLKAARLHEY--NKP----LRI--EDVDYPRLEG---RFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHEN 81 (359)
T ss_dssp ----CEEEESST--TSC----CEE--ECCCCCCCBT---TBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCE
T ss_pred hhhceEEEEecC--CCC----cEE--EEccCCCCCC---CCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCc
Confidence 567999999997 533 455 4578887 64 999999999999999999998885420 235689999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCC
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIP 130 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~ 130 (347)
+| +|+++|++|++|++||||+++ |+|+||+++|+++ ++++ |++
T Consensus 82 ~G--~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~i-P~~--- 154 (359)
T 1h2b_A 82 VG--YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKD--- 154 (359)
T ss_dssp EE--EEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTT---
T ss_pred eE--EEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHh-EEEC-CCC---
Confidence 88 999999999999999999863 7999999999998 9999 999
Q ss_pred hhhh-hh---hcCChhhhHHHHHHhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCC
Q 019012 131 LSYH-IG---LLGMPGFTAYAGFHEV-CSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 131 ~~~~-~a---~l~~~~~ta~~al~~~-~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
++++ +| +++++++|||+++.+. +++++|++|||+|+ |++|++++|+|+.+ |++|++++++++++++++ ++|+
T Consensus 155 ~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa 232 (359)
T 1h2b_A 155 ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGA 232 (359)
T ss_dssp CCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTC
T ss_pred CCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCC
Confidence 8886 55 6888899999999665 89999999999998 99999999999999 999999999999999999 9999
Q ss_pred CeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh---hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcc
Q 019012 205 DEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE---MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKR 280 (347)
Q Consensus 205 ~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
++++|+++. +.+.+++++++ ++|++||++|+. .++.++++ ++|+++.+|.... . ..+...++.++
T Consensus 233 ~~vi~~~~~--~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~ 301 (359)
T 1h2b_A 233 DHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSE 301 (359)
T ss_dssp SEEEETTSC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTT
T ss_pred CEEEeccch--HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCC
Confidence 999999873 77788888887 899999999986 78888887 9999999997542 1 34556778899
Q ss_pred eEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 281 ITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+++.|+.... .+.++++++++++|.+++.+ .+++|+++++|++.+.+++..||+||++
T Consensus 302 ~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 302 VSFEGSLVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp CEEEECCSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred cEEEEecCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 9999987654 67799999999999999988 8889999999999999988889999874
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=375.26 Aligned_cols=309 Identities=20% Similarity=0.263 Sum_probs=265.9
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
++.+|||++++++ + .+.+ .++|.|+|. ++||||||.|++||++|++.+.|.+ ...+|.++|||++|
T Consensus 20 ~p~~mkA~v~~~~--~-----~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~G~~--~~~~p~v~G~e~~G 85 (370)
T 4ej6_A 20 FQSMMKAVRLESV--G-----NISV--RNVGIPEPG---PDDLLVKVEACGICGTDRHLLHGEF--PSTPPVTLGHEFCG 85 (370)
T ss_dssp -CCEEEEEEEEET--T-----EEEE--EEEECCCCC---TTEEEEEEEEEECCHHHHHHHTTSS--CCCSSEECCCSEEE
T ss_pred cchheEEEEEecC--C-----ceEE--EEccCCCCC---CCeEEEEEEEEeecHHHHHHHcCCC--CCCCCeecCcceEE
Confidence 5678999999986 4 3344 557778774 9999999999999999999999865 35669999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEE------------------------------ecCcceeEEeeccccceecCCCCCCChh
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAG------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLS 132 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~ 132 (347)
+|+++|+++++|++||+|++ .|+|+||++++++. ++++ |++ ++
T Consensus 86 --~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~---~~ 158 (370)
T 4ej6_A 86 --IVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQ-AFEI-PLT---LD 158 (370)
T ss_dssp --EEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTT---SC
T ss_pred --EEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhh-EEEC-CCC---CC
Confidence 99999999999999999986 38999999999998 9999 999 88
Q ss_pred hhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 133 YHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 133 ~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
++.|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|+++++|++
T Consensus 159 ~~~aal~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~ 235 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPS 235 (370)
T ss_dssp TTGGGGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTT
T ss_pred HHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECCC
Confidence 87666888999999999 7799999999999997 9999999999999999 9999999999999999 99999999998
Q ss_pred CHHHHHHHHHH---HCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 212 DETDLVAALKR---CFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 212 ~~~~~~~~i~~---~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
+. ++.+.+++ ++++++|+||||+|+ ..++.++++++++|+++.+|..... .....+...++.+++++.|+.
T Consensus 236 ~~-~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~ 310 (370)
T 4ej6_A 236 AG-DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSF 310 (370)
T ss_dssp SS-CHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECC
T ss_pred Cc-CHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEec
Confidence 86 88888988 777799999999995 6899999999999999999976542 123456778899999999987
Q ss_pred cccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCc-ccceEEEEecC
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGK-NVGKQVVRVAC 346 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~~~ 346 (347)
... ..++++++++++|++++ .+..+++|+++++|++.+.+++ ..+|+++++++
T Consensus 311 ~~~------~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~ 366 (370)
T 4ej6_A 311 INP------FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER 366 (370)
T ss_dssp SCT------TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred cCh------HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence 643 23789999999999954 4778889999999999998876 45688887653
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-51 Score=370.50 Aligned_cols=311 Identities=17% Similarity=0.157 Sum_probs=262.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ | .+++ ++.|.|++.+ |+||||||.|+|||++|++.+.|.. ...+|+++|||++| +|
T Consensus 1 MkAvv~~~~--g-----~l~v--~e~p~P~~~~--~~eVlVkv~a~gi~~sD~~~~~g~~--~~~~P~i~G~E~~G--~V 65 (346)
T 4a2c_A 1 MKSVVNDTD--G-----IVRV--AESVIPEIKH--QDEVRVKIASSGLCGSDLPRIFKNG--AHYYPITLGHEFSG--YI 65 (346)
T ss_dssp CEEEEECSS--S-----CEEE--EECCCCCCCS--TTEEEEEEEEEECCTTHHHHHHSSC--SSSSSBCCCCEEEE--EE
T ss_pred CCEEEEecC--C-----CEEE--EEEeCCCCCC--cCEEEEEEEEEEECHHHHHHHcCCC--CCCCCccccEEEEE--EE
Confidence 899999987 5 3344 5688887545 9999999999999999998888854 34579999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhhhh
Q 019012 87 KVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIG 136 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a 136 (347)
+++|++|+++++||+|++. |+|+||+++|+++ ++++ |++ ++++.|
T Consensus 66 ~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---l~~~~a 140 (346)
T 4a2c_A 66 DAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKN-VFAL-PTD---MPIEDG 140 (346)
T ss_dssp EEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGG-EEEC-CTT---SCGGGG
T ss_pred EEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchhe-EEEC-CCC---CCHHHH
Confidence 9999999999999999862 7999999999998 9999 999 888755
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHH
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD 215 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 215 (347)
++..++.++++++ ...++++|++|||+|+ |++|++++|+|+++|+ .+++++.+++|+++++ ++|+++++|+++. +
T Consensus 141 a~l~~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~-~ 216 (346)
T 4a2c_A 141 AFIEPITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM-S 216 (346)
T ss_dssp GGHHHHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEETTTS-C
T ss_pred HhchHHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeCCCC-C
Confidence 5544555566655 7789999999999997 9999999999999999 5678888999999999 9999999999987 8
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc
Q 019012 216 LVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293 (347)
Q Consensus 216 ~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
+.+.+++++++ ++|++||++|. ..++.++++++++|+++.+|...... .....+...++.+++++.|++......
T Consensus 217 ~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~k~~~i~G~~~~~~~~ 293 (346)
T 4a2c_A 217 APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL---HLTSATFGKILRKELTVIGSWMNYSSP 293 (346)
T ss_dssp HHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCE---EECHHHHHHHHHHTCEEEECCTTCCSS
T ss_pred HHHHHHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCc---cccccCHHHHhhceeEEEEEeccccCc
Confidence 88888888887 89999999996 58899999999999999999765421 112334567788999999987654333
Q ss_pred hhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 294 LYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 294 ~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
...+.++++++++++|++++ .++.+|+|+++++|++.+.+++..||+||++
T Consensus 294 ~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 294 WPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp TTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred chHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 33567899999999998864 4677889999999999999999889999864
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-51 Score=376.54 Aligned_cols=320 Identities=18% Similarity=0.251 Sum_probs=263.8
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCC---------CC
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPP---------FV 75 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p---------~i 75 (347)
++|||++++++ |.|. ..+.+++.+.|.|.+ + ++||||||.|++||++|++.++|.+.....+| .+
T Consensus 2 ~~mka~~~~~~--g~~~-~~l~~~~~~~P~p~~-~--~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i 75 (364)
T 1gu7_A 2 ITAQAVLYTQH--GEPK-DVLFTQSFEIDDDNL-A--PNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAP 75 (364)
T ss_dssp EEEEEEEESSC--SCHH-HHCEEEEEEECTTSC-C--TTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEE
T ss_pred ceEEEEEeccC--CCch-heeEEeeccCCCCCC-C--CCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccc
Confidence 45899999998 6541 124665544444433 4 89999999999999999999988653222345 89
Q ss_pred CCCceecceEEEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCC-----------CCCChhhh-hhhcC
Q 019012 76 PGQPVEGFGVSKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPD-----------HHIPLSYH-IGLLG 139 (347)
Q Consensus 76 ~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~-----------~~~~~~~~-~a~l~ 139 (347)
+|||++| +|+++|++|++|++||+|++. |+|+||++++++. ++++ |+ + ++++ +|+++
T Consensus 76 ~G~E~~G--~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~~~~~~~~---~~~~~aa~l~ 148 (364)
T 1gu7_A 76 CGNEGLF--EVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNPAQSKANGKPNG---LTINQGATIS 148 (364)
T ss_dssp CCSCCEE--EEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCHHHHHHTTCSCC---CCHHHHHTCT
T ss_pred cCceeEE--EEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHH-eEEc-CCccccccccccCC---CCHHHHhhcc
Confidence 9999888 999999999999999999976 8999999999998 9999 98 7 7775 78888
Q ss_pred ChhhhHHHHHHhhcCCCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh----HHHHHHHcCCCeeeecCC--
Q 019012 140 MPGFTAYAGFHEVCSPKSG-EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK----VDLLKNKLGFDEAFNYND-- 212 (347)
Q Consensus 140 ~~~~ta~~al~~~~~~~~~-~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~----~~~~~~~~g~~~vi~~~~-- 212 (347)
.+++|||+++.+.+++++| ++|||+||+|++|++++|+|+.+|++|++++++.++ .++++ ++|+++++|+++
T Consensus 149 ~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~ 227 (364)
T 1gu7_A 149 VNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNN 227 (364)
T ss_dssp THHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHH
T ss_pred ccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccc
Confidence 8999999999776789999 999999999999999999999999999999866554 57787 999999999874
Q ss_pred -HHHHHHHHHHHC--CC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccc
Q 019012 213 -ETDLVAALKRCF--PQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQ 288 (347)
Q Consensus 213 -~~~~~~~i~~~~--~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
. ++.+.+++.+ ++ ++|++|||+|+.....++++++++|+++.+|..... ....+...++.+++++.|+..
T Consensus 228 ~~-~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~ 301 (364)
T 1gu7_A 228 SR-EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTSAGFWV 301 (364)
T ss_dssp CG-GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEEEECCH
T ss_pred hH-HHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHHhhcCcEEEEEch
Confidence 4 6778888887 44 899999999987766899999999999999975431 123445567789999998765
Q ss_pred ccc----cchhHHHHHHHHHHHHCCceeeeeecccccc---cHHHHHHHhhcCcccceEEEEe
Q 019012 289 SDY----LHLYPRFLDYVISNYKQGKIVYVEDMNEGLE---NAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 289 ~~~----~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~---~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
..+ +....+.++++++++++|.+++.+..+++++ ++++|++.+.+++..||+||++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 302 TELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred hHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence 432 2223567999999999999999877777664 9999999999888889999975
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=371.51 Aligned_cols=310 Identities=20% Similarity=0.243 Sum_probs=261.7
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
.|++|||+++.++ |++ +.++ ++|.|+|. ++||||||.|++||++|++.+.|.+. ..+|.++|||++|
T Consensus 6 ~p~~mka~~~~~~--g~~----l~~~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G 72 (373)
T 1p0f_A 6 KDITCKAAVAWEP--HKP----LSLE--TITVAPPK---AHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVG 72 (373)
T ss_dssp SCEEEEEEEBSST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEE
T ss_pred CcceeEEEEEEcC--CCC----eeEE--EeeCCCCC---CCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceE
Confidence 4567999999987 543 4554 46777674 99999999999999999999888543 4569999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|++|++|++||||++. |+|+||
T Consensus 73 --~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey 150 (373)
T 1p0f_A 73 --VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEY 150 (373)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSE
T ss_pred --EEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeE
Confidence 999999999999999999853 789999
Q ss_pred EEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEC
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 190 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~ 190 (347)
+++|++. ++++ |++ +++++|+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus 151 ~~v~~~~-~~~i-P~~---l~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~ 224 (373)
T 1p0f_A 151 TVVADIA-VAKI-DPK---APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT 224 (373)
T ss_dssp EEEETTS-EEEE-CTT---CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS
T ss_pred EEEchhh-EEEC-CCC---CChhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence 9999998 9999 999 777766778899999999988899999999999996 9999999999999999 8999999
Q ss_pred ChHhHHHHHHHcCCCeeeecCC--HHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCC
Q 019012 191 SSQKVDLLKNKLGFDEAFNYND--ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHD 266 (347)
Q Consensus 191 ~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (347)
+++++++++ ++|+++++|+++ . ++.+.+++.+++++|++||++|+ +.++.++++++++ |+++.+|.....
T Consensus 225 ~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---- 298 (373)
T 1p0f_A 225 HKDKFPKAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN---- 298 (373)
T ss_dssp CGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----
T ss_pred CHHHHHHHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCC----
Confidence 999999999 999999999874 3 68888999887799999999997 6899999999999 999999975431
Q ss_pred CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 267 PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.....+...++.++ ++.|+....+. .+.++++++++++|++++ .+..+++|+++++|++.+.+++. +|+||++
T Consensus 299 ~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 1p0f_A 299 ERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY 373 (373)
T ss_dssp CCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred CccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 11233445566677 88887654321 256889999999999884 56778899999999999988765 6998874
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-51 Score=371.77 Aligned_cols=302 Identities=17% Similarity=0.188 Sum_probs=259.0
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
+++|||+++.++ +++ +.++ ++|.|+|. ++||||||.|++||++|++.+.|.+. ...+|.++|||++|
T Consensus 2 ~m~mka~~~~~~--~~~----l~~~--~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~E~~G- 68 (348)
T 3two_A 2 RVQSKGFAIFSK--DEH----FKPH--DFSRHAVG---PRDVLIDILYAGICHSDIHSAYSEWK-EGIYPMIPGHEIAG- 68 (348)
T ss_dssp CEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEEECHHHHHHHTTSSS-CCCSSBCCCCCEEE-
T ss_pred ceEEEEEEEccC--CCC----CeEE--EeeCCCCC---CCeEEEEEEEeeecccchhhhcCCCC-CCCCCeecCcceeE-
Confidence 357999999987 433 4664 46777664 99999999999999999999988653 24569999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe----------------------------------------cCcceeEEeeccccceec
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL----------------------------------------TGWEEYSLIRKTEQLRKI 123 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~~~~~~i 123 (347)
+|+++|++|++|++||+|++. |+|+||+++|+++ ++++
T Consensus 69 -~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~i 146 (348)
T 3two_A 69 -IIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENY-VISV 146 (348)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGG-CEEC
T ss_pred -EEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhh-EEEC
Confidence 999999999999999999752 9999999999998 9999
Q ss_pred CCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc
Q 019012 124 QPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202 (347)
Q Consensus 124 ~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~ 202 (347)
|++ ++++ +|+++..+.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ ++
T Consensus 147 -P~~---~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l 219 (348)
T 3two_A 147 -DKN---APLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM 219 (348)
T ss_dssp -CTT---SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT
T ss_pred -CCC---CCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc
Confidence 999 8886 7889999999999995 469999999999997 99999999999999999999999999999999 99
Q ss_pred CCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHh-hcc
Q 019012 203 GFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLV-TKR 280 (347)
Q Consensus 203 g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~ 280 (347)
|+++++ .+. + .++ .++|++||++|+. .++.++++++++|+++.+|..... .....+...++ .++
T Consensus 220 Ga~~v~-~~~--~---~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~ 285 (348)
T 3two_A 220 GVKHFY-TDP--K---QCK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFDFIHLGN 285 (348)
T ss_dssp TCSEEE-SSG--G---GCC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHHHHHTCS
T ss_pred CCCeec-CCH--H---HHh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHHHHhhCC
Confidence 999888 332 2 111 1799999999987 899999999999999999976521 11124555666 899
Q ss_pred eEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 281 ITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
+++.|+.... .+.++++++++++|.+++.+ .+++++++++|++.+.+++..||+||+++++
T Consensus 286 ~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~ 346 (348)
T 3two_A 286 RKVYGSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346 (348)
T ss_dssp CEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred eEEEEEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence 9999988766 56799999999999999965 5889999999999999999889999999764
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-52 Score=374.57 Aligned_cols=310 Identities=18% Similarity=0.213 Sum_probs=265.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |+|+ .++..++|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||++| +|
T Consensus 1 MkA~~~~~~--g~~~----~l~~~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G--~V 69 (324)
T 3nx4_A 1 MQALILEQQ--DGKT----LASVQHLEESQLP---AGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAG--TV 69 (324)
T ss_dssp CEEEEEEES--SSSE----EEEEEECCGGGSC---CCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEE--EE
T ss_pred CceEEEecC--CCCc----eeeEeecCCCCCC---CCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEE--EE
Confidence 799999998 8774 4555668888775 99999999999999999999998764445679999999888 99
Q ss_pred EEeccCCCCCCCCCEEEE---------ecCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHh--hcC
Q 019012 87 KVVDSDNPNFKPGDLVAG---------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHE--VCS 154 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~---------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~--~~~ 154 (347)
+++| +++|++||||++ .|+|+||+.+|++. ++++ |++ ++++ +|+++..++|||++++. ..+
T Consensus 70 ~~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~al~~~~~~~ 142 (324)
T 3nx4_A 70 HASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDW-LVAL-PAG---LSSRNAMIIGTAGFTAMLCVMALEDAG 142 (324)
T ss_dssp EEES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTT---CCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHH-cEEC-CCC---CCHHHHHHhhhHHHHHHHHHHHhhhcc
Confidence 9998 578999999995 38999999999998 9999 999 8886 78899999999999863 355
Q ss_pred CCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 155 PKSGE-YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 155 ~~~~~-~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
+++++ +|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|+++++|+++. +. +++++++++|++||
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRPLEKQLWAGAID 217 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCSSCCCCEEEEEE
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHhhcCCCccEEEE
Confidence 66633 4999999999999999999999999999999999999999 9999999998764 32 55566668999999
Q ss_pred CCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCcee
Q 019012 234 NVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~ 312 (347)
|+|++.++.++++++++|+++.+|..... ....+...++.+++++.|+..... +....+.++++++++++|.++
T Consensus 218 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~ 292 (324)
T 3nx4_A 218 TVGDKVLAKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYA 292 (324)
T ss_dssp SSCHHHHHHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCCcHHHHHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999976442 123455678889999999875443 334457789999999999999
Q ss_pred eeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 313 YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 313 ~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
+. ..+++++++++|++.+.+++..||+||+++
T Consensus 293 ~~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 293 QA-ATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp HH-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred CC-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 87 888899999999999999999999999874
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=367.33 Aligned_cols=314 Identities=21% Similarity=0.217 Sum_probs=268.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |.+. .+.+ .+.|.|.|. ++||+|||.+++||++|++.+.|.+. ...+|.++|||++| +|
T Consensus 2 Mka~~~~~~--g~~~--~l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G--~V 69 (327)
T 1qor_A 2 ATRIEFHKH--GGPE--VLQA--VEFTPADPA---ENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAG--IV 69 (327)
T ss_dssp CEEEEBSSC--CSGG--GCEE--EECCCCCCC---TTEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEE--EE
T ss_pred cEEEEEcCC--CChh--heEE--eccCCCCCC---CCEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCCCceeEE--EE
Confidence 799999988 7664 4555 457778774 99999999999999999999888652 23468999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYV 161 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~v 161 (347)
+++|+++++|++||||... |+|+||+.+|++. ++++ |++ ++++ +|+++.+++|||+++.+.+++++|++|
T Consensus 70 ~~vG~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~-~~~i-P~~---l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~v 144 (327)
T 1qor_A 70 SKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAA---ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQF 144 (327)
T ss_dssp EEECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTT---SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEE
T ss_pred EEECCCCCCCCCCCEEEECCCCCceeeeEEEecHHH-cEEC-CCC---CCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEE
Confidence 9999999999999999644 8999999999998 9999 999 8886 678999999999999778899999999
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhH
Q 019012 162 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEML 240 (347)
Q Consensus 162 LI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~ 240 (347)
||+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|.+.+
T Consensus 145 lV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~ 222 (327)
T 1qor_A 145 LFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTW 222 (327)
T ss_dssp EESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGH
T ss_pred EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCchHHH
Confidence 99999999999999999999999999999999999999 8999999998876 788888888876 89999999998899
Q ss_pred HHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhc-ceEeeccccccc---cchhHHHHHHHHHHHHCCceeeeee
Q 019012 241 DAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTK-RITMKGFLQSDY---LHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 241 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
+.++++++++|+++.+|..... ....+...++.+ ++++.+.....+ +....+.++++++++++|++++.+.
T Consensus 223 ~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~ 297 (327)
T 1qor_A 223 ERSLDCLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVA 297 (327)
T ss_dssp HHHHHTEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred HHHHHHhcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccc
Confidence 9999999999999999976432 123444556666 777765433221 2224567899999999999999888
Q ss_pred --cccccccHHHHHHHhhcCcccceEEEEe
Q 019012 317 --MNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 317 --~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+++|+++++|++.+.+++..||+||++
T Consensus 298 ~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 298 EQQKYPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp GGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred cCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8899999999999999888889999864
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-50 Score=364.25 Aligned_cols=306 Identities=22% Similarity=0.286 Sum_probs=265.7
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |.+ +.+ .++|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||++| +|
T Consensus 1 Mka~~~~~~--g~~----l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G--~V 67 (339)
T 1rjw_A 1 MKAAVVEQF--KEP----LKI--KEVEKPTIS---YGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVG--IV 67 (339)
T ss_dssp CEEEEBSST--TSC----CEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEE--EE
T ss_pred CeEEEEcCC--CCC----cEE--EEeeCCCCC---CCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceE--EE
Confidence 689999887 532 455 458888774 99999999999999999998888653234569999999888 99
Q ss_pred EEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 87 KVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
+++|++|++|++||||++ .|+|+||+++|++. ++++ |++ ++++
T Consensus 68 ~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~ 142 (339)
T 1rjw_A 68 EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDN---LSFEE 142 (339)
T ss_dssp EEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTT---SCHHH
T ss_pred EEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHH-EEEC-CCC---CCHHH
Confidence 999999999999999985 27899999999998 9999 999 8886
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
+|+++.++.|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++.
T Consensus 143 aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~~~~- 218 (339)
T 1rjw_A 143 AAPIFCAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE- 218 (339)
T ss_dssp HGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS-
T ss_pred hhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEecCCCc-
Confidence 78899999999999955 58999999999998 88999999999999999999999999999999 9999999998875
Q ss_pred HHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc
Q 019012 215 DLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
++.+.+++.+ +++|++||++|. ..++.++++++++|+++.+|..... ...+...++.+++++.|+....
T Consensus 219 ~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~--- 288 (339)
T 1rjw_A 219 DAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSIVGT--- 288 (339)
T ss_dssp CHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC---
T ss_pred cHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC------CccCHHHHHhCCcEEEEeccCC---
Confidence 7778888777 689999999997 7899999999999999999875431 2345567788999999877654
Q ss_pred hhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 294 LYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 294 ~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
.+.++++++++++|.+++.+ .+++|+++++|++.+.+++..||+||++++.
T Consensus 289 --~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 339 (339)
T 1rjw_A 289 --RKDLQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLEDK 339 (339)
T ss_dssp --HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCCC
T ss_pred --HHHHHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCCC
Confidence 56789999999999999874 5789999999999999888789999998763
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-51 Score=369.74 Aligned_cols=308 Identities=21% Similarity=0.242 Sum_probs=261.1
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhccccccc-CCC-CCCCCCCCCCCcee
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS-SFT-SSYIPPFVPGQPVE 81 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~-~~~-~~~~~p~i~G~e~~ 81 (347)
|++|||++++++ |. .+.++ ++|.|+|. ++||||||.|++||++|++.+.| .+. ....+|.++|||++
T Consensus 2 m~~mka~~~~~~--g~----~l~~~--~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~ 70 (348)
T 2d8a_A 2 SEKMVAIMKTKP--GY----GAELV--EVDVPKPG---PGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVA 70 (348)
T ss_dssp -CEEEEEEECSS--SS----SCEEE--EEECCCCC---TTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEE
T ss_pred CCcceEEEEECC--CC----CEEEE--ECCCCCCC---cCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccce
Confidence 456999999997 53 34554 57777774 99999999999999999998887 331 12356899999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCCh
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPL 131 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~ 131 (347)
| +|+++|++|++|++||||++. |+|+||+++|++. ++++ |++ +
T Consensus 71 G--~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~ 143 (348)
T 2d8a_A 71 G--EVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN-IWKN-PKS---I 143 (348)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGG-EEEC-CTT---S
T ss_pred E--EEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHH-eEEC-CCC---C
Confidence 8 999999999999999999974 8999999999998 9999 999 8
Q ss_pred hhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
+++.|++..+++|||+++ +.+++ +|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|+++++|+
T Consensus 144 ~~~~aa~~~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~ 219 (348)
T 2d8a_A 144 PPEYATLQEPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINP 219 (348)
T ss_dssp CHHHHTTHHHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECT
T ss_pred CHHHHHhhhHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECC
Confidence 887444446899999999 67889 9999999999 9999999999999999 9999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccch-HHHhhcceEeeccc
Q 019012 211 NDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL-FTLVTKRITMKGFL 287 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 287 (347)
++. ++.+.+++.+++ ++|++||++|. ..++.++++++++|+++.+|..... ...+. ..++.+++++.|+.
T Consensus 220 ~~~-~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~i~g~~ 292 (348)
T 2d8a_A 220 FEE-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK------VTIDFNNLIIFKALTIYGIT 292 (348)
T ss_dssp TTS-CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHTTTTTCEEEECC
T ss_pred CCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------cccCchHHHHhCCcEEEEec
Confidence 876 888899999887 89999999997 7889999999999999999975431 23445 66778999999876
Q ss_pred cccccchhHHHHHHHHHHHHCCce--eeeeecccc-cccHHHHHHHhhcCcccceEEEEec
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGKI--VYVEDMNEG-LENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~i--~~~~~~~~~-l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
... ..+.++++++++++|++ ++.+..+|+ |+++++|++.+.+ +..+|+||+++
T Consensus 293 ~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~ 348 (348)
T 2d8a_A 293 GRH----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK 348 (348)
T ss_dssp CCC----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred CCC----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence 532 15678999999999996 455677888 9999999999977 55689999864
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-50 Score=365.80 Aligned_cols=311 Identities=21% Similarity=0.303 Sum_probs=267.9
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
+|.+|||++++++ |.+ +.++ ++|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||++|
T Consensus 2 ~p~~mka~~~~~~--g~~----l~~~--~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G 70 (347)
T 2hcy_A 2 IPETQKGVIFYES--HGK----LEYK--DIPVPKPK---ANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAG 70 (347)
T ss_dssp CCSEEEEEEESST--TCC----CEEE--EEECCCCC---TTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEE
T ss_pred CCcccEEEEEeCC--CCC----CEEE--EeeCCCCC---CCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceE
Confidence 5678999999997 532 4554 57777774 99999999999999999998888653234568999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCCh
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPL 131 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~ 131 (347)
+|+++|++|++|++||||++ .|+|+||+++|++. ++++ |++ +
T Consensus 71 --~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~ 143 (347)
T 2hcy_A 71 --VVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQ-AAHI-PQG---T 143 (347)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTT-SEEE-CTT---C
T ss_pred --EEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEecccc-EEEC-CCC---C
Confidence 99999999999999999985 27899999999998 9999 999 8
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
+++ +|+++.+++|||+++.+ .++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+
T Consensus 144 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~ 221 (347)
T 2hcy_A 144 DLAQVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDF 221 (347)
T ss_dssp CHHHHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEET
T ss_pred CHHHHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEec
Confidence 886 78899999999999954 58999999999999999999999999999999999999999999998 8999989997
Q ss_pred C-CHHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccc
Q 019012 211 N-DETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQ 288 (347)
Q Consensus 211 ~-~~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
+ .. ++.+.+++.+.+++|++||++|. ..++.++++|+++|+++.+|..... ....+...++.+++++.|+..
T Consensus 222 ~~~~-~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~ 295 (347)
T 2hcy_A 222 TKEK-DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVVKSISIVGSYV 295 (347)
T ss_dssp TTCS-CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHHTTCEEEECCC
T ss_pred CccH-hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhhCCcEEEEccC
Confidence 7 33 77778887776689999999997 7889999999999999999975431 123455677889999999876
Q ss_pred ccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 289 SDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
.. .+.++++++++++|.+++.+ .+++|+++++|++.+.+++..||+||+++
T Consensus 296 ~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 346 (347)
T 2hcy_A 296 GN-----RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346 (347)
T ss_dssp CC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred CC-----HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence 54 56789999999999999864 57899999999999998887899999876
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-50 Score=364.39 Aligned_cols=331 Identities=31% Similarity=0.552 Sum_probs=273.2
Q ss_pred cccccceEEEe-ccc-CCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccC----CCCCCCCCCCC
Q 019012 3 EQVENKQVIFR-GYI-EGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSS----FTSSYIPPFVP 76 (347)
Q Consensus 3 ~~~~~~a~~~~-~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~----~~~~~~~p~i~ 76 (347)
+|++|||+++. .+. .|.|.+..+.++ +.|.|+|.+ ++||||||.+++||++|++.+.+. +.....+|.++
T Consensus 5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~--~~~~P~~~~--~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~ 80 (357)
T 2zb4_A 5 AAMIVQRVVLNSRPGKNGNPVAENFRME--EVYLPDNIN--EGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVV 80 (357)
T ss_dssp -CCEEEEEEECCCCCTTSCCCGGGEEEE--EEECCSCCC--TTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBC
T ss_pred ccccceEEEEeccCCCCCCCCcCceEEE--eecCCCCCC--CCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccc
Confidence 45679999994 430 133422455664 577776724 999999999999999998877652 21123458999
Q ss_pred CCceecceEEEEeccCCCCCCCCCEEEEe-cCcceeEEeeccccceecCCCCCCCh-----hhhhhhcCChhhhHHHHHH
Q 019012 77 GQPVEGFGVSKVVDSDNPNFKPGDLVAGL-TGWEEYSLIRKTEQLRKIQPDHHIPL-----SYHIGLLGMPGFTAYAGFH 150 (347)
Q Consensus 77 G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~i~p~~~~~~-----~~~~a~l~~~~~ta~~al~ 150 (347)
|||++| +|++ +++++|++||||+++ |+|+||++++++. ++++ |++ + ++++|+++.+++|||+++.
T Consensus 81 G~E~~G--~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~~~~~~a~l~~~~~ta~~al~ 151 (357)
T 2zb4_A 81 DGGGIG--IIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNS-LEKV-DPQ---LVDGHLSYFLGAIGMPGLTSLIGIQ 151 (357)
T ss_dssp EEEEEE--EEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGG-CEEC-CGG---GGTTCGGGGGTTTSHHHHHHHHHHH
T ss_pred cccEEE--EEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHH-ceec-Ccc---cccCchhHHHHhcccHHHHHHHHHH
Confidence 999888 8888 899999999999997 7999999999998 9999 998 7 6678899999999999998
Q ss_pred hhcCCCCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCC
Q 019012 151 EVCSPKSG--EYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 151 ~~~~~~~~--~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
+.+++++| ++|||+||+|++|++++|+++..|+ +|+++++++++.+.+++++|++.++|+++. ++.+.+++.+.++
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAG 230 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTC
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCC
Confidence 88999999 9999999999999999999999999 999999999999999833999999998876 7888888888768
Q ss_pred ccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCcc----chHHHhhcceEeeccccccccchhHHHHHHHH
Q 019012 228 IDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIH----NLFTLVTKRITMKGFLQSDYLHLYPRFLDYVI 303 (347)
Q Consensus 228 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (347)
+|++|||+|+..++.++++++++|+++.+|.........+.... ....++.+++++.++....++....+.+++++
T Consensus 231 ~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 310 (357)
T 2zb4_A 231 VDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLS 310 (357)
T ss_dssp EEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHH
Confidence 99999999998999999999999999999976542111110000 02467788999999876554445577899999
Q ss_pred HHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 304 SNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 304 ~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
+++++|++++.+..+++|+++++|++.+.+++..||+||+++++
T Consensus 311 ~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 354 (357)
T 2zb4_A 311 QWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354 (357)
T ss_dssp HHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred HHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence 99999999998888899999999999999888789999998764
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-50 Score=368.46 Aligned_cols=308 Identities=19% Similarity=0.263 Sum_probs=262.2
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
|++|||+++.++ |.+ +.++ ++|.|+|. ++||||||.+++||++|++.+.|. +...+|.++|||++|
T Consensus 6 p~~mka~~~~~~--g~~----l~~~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~--~~~~~P~v~GhE~~G- 71 (376)
T 1e3i_A 6 VIKCKAAIAWKT--GSP----LCIE--EIEVSPPK---ACEVRIQVIATCVCPTDINATDPK--KKALFPVVLGHECAG- 71 (376)
T ss_dssp CEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHTTCTT--SCCCSSBCCCCEEEE-
T ss_pred ChheeEEEEecC--CCC----eEEE--EeeCCCCC---CCeEEEEEeEEeEchhhHHHhcCC--CCCCCCcccCccccE-
Confidence 567999999987 543 4554 46677664 999999999999999999988874 234569999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe-------------------------------------------------------cCc
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL-------------------------------------------------------TGW 108 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~-------------------------------------------------------g~~ 108 (347)
+|+++|++|++|++||||++. |+|
T Consensus 72 -~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~ 150 (376)
T 1e3i_A 72 -IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSF 150 (376)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred -EEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccc
Confidence 999999999999999999862 789
Q ss_pred ceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEE
Q 019012 109 EEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVV 186 (347)
Q Consensus 109 ~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~ 186 (347)
+||+++|++. ++++ |++ ++++ +|+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus 151 aey~~v~~~~-~~~i-P~~---l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi 224 (376)
T 1e3i_A 151 SQYTVVSEAN-LARV-DDE---ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRII 224 (376)
T ss_dssp BSEEEEEGGG-EEEC-CTT---CCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEE
T ss_pred eeEEEecccc-EEEC-CCC---CCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Confidence 9999999998 9999 999 8886 78888899999999988899999999999996 9999999999999999 899
Q ss_pred EEECChHhHHHHHHHcCCCeeeecCC--HHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccc
Q 019012 187 GSAGSSQKVDLLKNKLGFDEAFNYND--ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLH 262 (347)
Q Consensus 187 ~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~ 262 (347)
+++++++++++++ ++|+++++|+++ . ++.+.+++.+++++|++||++|+ +.++.++++++++ |+++.+|....
T Consensus 225 ~~~~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~- 301 (376)
T 1e3i_A 225 AIDINGEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD- 301 (376)
T ss_dssp EECSCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS-
T ss_pred EEcCCHHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCC-
Confidence 9999999999999 999999999874 3 68888888887799999999997 6889999999999 99999987321
Q ss_pred cCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceE
Q 019012 263 SYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQ 340 (347)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~ 340 (347)
....+...++.++ ++.|+....+. ..+.++++++++++|++++ .+..+++|+++++|++.+.+++. +|+
T Consensus 302 -----~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kv 372 (376)
T 1e3i_A 302 -----EMTIPTVDVILGR-SINGTFFGGWK--SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRT 372 (376)
T ss_dssp -----EEEEEHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEE
T ss_pred -----ccccCHHHhhccC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceE
Confidence 1234555667777 88887654321 2567899999999999984 56778899999999999988774 699
Q ss_pred EEEe
Q 019012 341 VVRV 344 (347)
Q Consensus 341 vv~~ 344 (347)
||++
T Consensus 373 vi~~ 376 (376)
T 1e3i_A 373 ILTF 376 (376)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9874
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-50 Score=367.51 Aligned_cols=311 Identities=19% Similarity=0.264 Sum_probs=263.0
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
+|++|||+++.++ |.+ +.++ ++|.|+|. ++||||||.+++||++|++.+.|.+. ..+|.++|||++|
T Consensus 5 ~~~~mkA~~~~~~--g~~----l~~~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G 71 (374)
T 2jhf_A 5 KVIKCKAAVLWEE--KKP----FSIE--EVEVAPPK---AHEVRIKMVATGICRSDDHVVSGTLV--TPLPVIAGHEAAG 71 (374)
T ss_dssp SCEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHHHHTSSC--CCSSBCCCCSEEE
T ss_pred CceeEEEEEEecC--CCc----eEEE--EccCCCCC---CCeEEEEEeEEeechhhHHHHcCCCC--CCCCcccCcCceE
Confidence 3567999999987 543 4554 46777664 99999999999999999999888542 2269999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|++|++|++||||++. |+|+||
T Consensus 72 --~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey 149 (374)
T 2jhf_A 72 --IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149 (374)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSE
T ss_pred --EEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeE
Confidence 999999999999999999853 789999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 189 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~ 189 (347)
+++|++. ++++ |++ ++++ +|+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus 150 ~~v~~~~-~~~i-P~~---l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~ 223 (374)
T 2jhf_A 150 TVVDEIS-VAKI-DAA---SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVD 223 (374)
T ss_dssp EEEEGGG-EEEC-CTT---CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEchHH-eEEC-CCC---CCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence 9999998 9999 999 8886 78888999999999988889999999999995 9999999999999999 899999
Q ss_pred CChHhHHHHHHHcCCCeeeecCC--HHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCC
Q 019012 190 GSSQKVDLLKNKLGFDEAFNYND--ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYH 265 (347)
Q Consensus 190 ~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 265 (347)
++++++++++ ++|+++++|+++ . ++.+.+++.+++++|++||++|+ ..++.++++++++ |+++.+|.....
T Consensus 224 ~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~--- 298 (374)
T 2jhf_A 224 INKDKFAKAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS--- 298 (374)
T ss_dssp SCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTT---
T ss_pred CCHHHHHHHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCC---
Confidence 9999999999 999999999874 3 67888988887789999999997 6889999999999 999999975431
Q ss_pred CCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 266 DPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.....+...++.++ ++.|+....+. ..+.++++++++++|++++ .+..+|+|+++++|++.+.+++. +|+||+
T Consensus 299 -~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~ 373 (374)
T 2jhf_A 299 -QNLSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILT 373 (374)
T ss_dssp -CCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEE
T ss_pred -CccccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEe
Confidence 11233445566777 88887654322 2567899999999999984 56778899999999999988775 699987
Q ss_pred e
Q 019012 344 V 344 (347)
Q Consensus 344 ~ 344 (347)
+
T Consensus 374 ~ 374 (374)
T 2jhf_A 374 F 374 (374)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=370.59 Aligned_cols=309 Identities=20% Similarity=0.244 Sum_probs=268.7
Q ss_pred ccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCcee
Q 019012 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVE 81 (347)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~ 81 (347)
||..+|||++++++ |+ .+.++ ++|.|+| + ++||||||.|++||++|++.+.|.+. ...+|.++|||++
T Consensus 13 ~~~~~mka~~~~~~--g~----~l~~~--~~~~P~~-~--~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE~~ 80 (380)
T 1vj0_A 13 MMGLKAHAMVLEKF--NQ----PLVYK--EFEISDI-P--RGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGA 80 (380)
T ss_dssp -CCEEEEEEEBCST--TS----CCEEE--EEEECCC-C--TTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEE
T ss_pred HhhhheEEEEEecC--CC----CeEEE--EccCCCC-C--CCEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcCcE
Confidence 56678999999998 51 34664 4677767 4 99999999999999999999988542 2356899999988
Q ss_pred cceEEEEeccCCC------CCCCCCEEEE---------------------------------------ecCcceeEEe-e
Q 019012 82 GFGVSKVVDSDNP------NFKPGDLVAG---------------------------------------LTGWEEYSLI-R 115 (347)
Q Consensus 82 G~g~v~~vg~~v~------~~~~Gd~V~~---------------------------------------~g~~~~~~~v-~ 115 (347)
| +|+++| +|+ +|++||||++ .|+|+||+++ +
T Consensus 81 G--~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~ 157 (380)
T 1vj0_A 81 G--RVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDP 157 (380)
T ss_dssp E--EEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECT
T ss_pred E--EEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcc
Confidence 8 999999 999 9999999996 3789999999 9
Q ss_pred ccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 116 KTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 116 ~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
++. ++++ |++ ++++ .|++..+++|||+++ +.++ +++|++|||+| +|++|++++|+|+.+|+ +|+++++++
T Consensus 158 ~~~-~~~i-P~~---l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~ 230 (380)
T 1vj0_A 158 ETD-VLKV-SEK---DDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSP 230 (380)
T ss_dssp TCC-EEEE-CTT---SCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred cce-EEEC-CCC---CChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCH
Confidence 988 9999 999 8887 777777999999999 5688 99999999999 69999999999999995 999999999
Q ss_pred HhHHHHHHHcCCCeeeecC---CHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccc-cccCCC
Q 019012 193 QKVDLLKNKLGFDEAFNYN---DETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVS-LHSYHD 266 (347)
Q Consensus 193 ~~~~~~~~~~g~~~vi~~~---~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 266 (347)
+++++++ ++|+++++|++ +. ++.+.+++.+++ ++|++||++|+ ..++.++++++++|+++.+|... ..
T Consensus 231 ~~~~~~~-~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~---- 304 (380)
T 1vj0_A 231 NRLKLAE-EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD---- 304 (380)
T ss_dssp HHHHHHH-HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC----
T ss_pred HHHHHHH-HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC----
Confidence 9999999 99999999988 65 888999999987 89999999997 58999999999999999999764 21
Q ss_pred CCCccchHH-HhhcceEeeccccccccchhHHHHHHHHHHHHC--CceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 267 PQGIHNLFT-LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQ--GKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 267 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
....+... ++.+++++.|+.... .+.++++++++++ |++++.+..+|+|+++++|++.+.+++.. |+||+
T Consensus 305 -~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~ 377 (380)
T 1vj0_A 305 -PVPFKVYEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILY 377 (380)
T ss_dssp -CEEECHHHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEE
T ss_pred -CeeEchHHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEE
Confidence 12344555 788999999987654 6779999999999 99988888889999999999999988877 99998
Q ss_pred ec
Q 019012 344 VA 345 (347)
Q Consensus 344 ~~ 345 (347)
++
T Consensus 378 ~~ 379 (380)
T 1vj0_A 378 PE 379 (380)
T ss_dssp CC
T ss_pred eC
Confidence 75
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-51 Score=383.55 Aligned_cols=322 Identities=20% Similarity=0.210 Sum_probs=269.4
Q ss_pred CccccccceEEEecccC----------CCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCC----
Q 019012 1 MMEQVENKQVIFRGYIE----------GAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSF---- 66 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~----------g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~---- 66 (347)
|.++.+|||++++++.. +.+ .+.+.+ .++|.|+|. ++||||||.|++||++|++...+..
T Consensus 25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~-~~~l~~--~e~p~P~~~---~~eVlVkV~a~gic~sD~~~~~~~~~~~~ 98 (456)
T 3krt_A 25 LPLPESYRAITVHKDETEMFAGLETRDKDP-RKSIHL--DDVPVPELG---PGEALVAVMASSVNYNSVHTSIFEPLSTF 98 (456)
T ss_dssp SCCCSCEEEEEEEGGGTTTTTTCCGGGCCH-HHHCEE--EEECCCCCC---TTEEEEEEEEEEECHHHHHHHTTCSSCSH
T ss_pred CCCCcceEEEEEeccccccccccccccCCC-CCCcEE--EEccCCCCC---CCeEEEEEEEEEecchhhhhhhcCcccch
Confidence 44678999999998610 011 123455 557778774 9999999999999999986543211
Q ss_pred ------------CCCCCCC-CCCCCceecceEEEEeccCCCCCCCCCEEEE-----------------------------
Q 019012 67 ------------TSSYIPP-FVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG----------------------------- 104 (347)
Q Consensus 67 ------------~~~~~~p-~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~----------------------------- 104 (347)
......| .++|||++| +|+++|++|++|++||+|++
T Consensus 99 ~~~~~~g~~~~~~~~~~~P~~v~GhE~~G--~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~ 176 (456)
T 3krt_A 99 GFLERYGRVSDLAKRHDLPYHVIGSDLAG--VVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFET 176 (456)
T ss_dssp HHHHHHHTSCHHHHTTCCSEEECCSCCEE--EEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTS
T ss_pred hhhhhccccccccccCCCCcccccceeEE--EEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCC
Confidence 0012345 699999888 99999999999999999997
Q ss_pred -ecCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHH
Q 019012 105 -LTGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEV--CSPKSGEYVFVSAASGAVGQLVGQLAKL 180 (347)
Q Consensus 105 -~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~--~~~~~~~~vLI~Ga~g~~G~~ai~la~~ 180 (347)
.|+|+||+++|+++ ++++ |++ ++++ +|+++.+++|||+++... +++++|++|||+||+|++|++++|+|+.
T Consensus 177 ~~G~~aey~~v~~~~-~~~~-P~~---l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~ 251 (456)
T 3krt_A 177 NFGGLAEIALVKSNQ-LMPK-PDH---LSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALA 251 (456)
T ss_dssp SSCSSBSEEEEEGGG-EEEC-CTT---SCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHH
T ss_pred CCCcccceEEechHH-eeEC-CCC---CCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 38999999999998 9999 999 8886 677788999999999654 7899999999999999999999999999
Q ss_pred CCCEEEEEECChHhHHHHHHHcCCCeeeecCCH----------------HHHHHHHHHHCCC-CccEEEeCCChhhHHHH
Q 019012 181 HGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE----------------TDLVAALKRCFPQ-GIDIYFDNVGGEMLDAA 243 (347)
Q Consensus 181 ~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~----------------~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~ 243 (347)
.|++|++++++++++++++ ++|++.++|+++. +.+.+.+++++++ ++|++|||+|++.+..+
T Consensus 252 ~Ga~vi~~~~~~~~~~~~~-~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~ 330 (456)
T 3krt_A 252 GGANPICVVSSPQKAEICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGAS 330 (456)
T ss_dssp TTCEEEEEESSHHHHHHHH-HHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHH
T ss_pred cCCeEEEEECCHHHHHHHH-hhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHH
Confidence 9999999999999999999 9999999998763 1245788888887 99999999999999999
Q ss_pred HHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeeccccccc
Q 019012 244 LLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLEN 323 (347)
Q Consensus 244 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~ 323 (347)
+++++++|+++.+|...+. ....+...+..+++++.|+.... .+.+.++++++++|++++.+..+++|++
T Consensus 331 ~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~ 400 (456)
T 3krt_A 331 VFVTRKGGTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLED 400 (456)
T ss_dssp HHHEEEEEEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGG
T ss_pred HHHhhCCcEEEEEecCCCc-----ccccCHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHH
Confidence 9999999999999976442 22445667888889999988765 3456679999999999999989999999
Q ss_pred HHHHHHHhhcCcccceEEEEecC
Q 019012 324 APAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 324 ~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+++|++.+.+++..||+||.+.+
T Consensus 401 ~~eA~~~l~~~~~~GKvvv~~~~ 423 (456)
T 3krt_A 401 TGQAAYDVHRNLHQGKVGVLCLA 423 (456)
T ss_dssp HHHHHHHHHTTCSSSEEEEESSC
T ss_pred HHHHHHHHHhCCCCCcEEEEeCC
Confidence 99999999999999999998754
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-50 Score=367.39 Aligned_cols=312 Identities=23% Similarity=0.292 Sum_probs=263.7
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
.+++|||+++.++ +++ +.++ ++|.|+|. ++||||||.|++||++|++.+.|.+. ...+|.++|||++|
T Consensus 3 ~p~~mkA~~~~~~--~~~----l~~~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G 70 (373)
T 2fzw_A 3 EVIKCKAAVAWEA--GKP----LSIE--EIEVAPPK---AHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAG 70 (373)
T ss_dssp CCEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEE
T ss_pred CccceEEEEEecC--CCC----cEEE--EeeCCCCC---CCEEEEEEEEEEEchhhHHHhcCCCC-CCCCCccccccccE
Confidence 4568999999987 543 4554 46677664 99999999999999999999888542 23569999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|++|++|++||||++. |+|+||
T Consensus 71 --~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey 148 (373)
T 2fzw_A 71 --IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY 148 (373)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred --EEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeE
Confidence 999999999999999999853 789999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 189 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~ 189 (347)
+++|++. ++++ |++ ++++ +|+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus 149 ~~v~~~~-~~~i-P~~---l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~ 222 (373)
T 2fzw_A 149 TVVADIS-VAKI-DPL---APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD 222 (373)
T ss_dssp EEEEGGG-EEEC-CTT---SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred EEEchhh-eEEC-CCC---CCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence 9999998 9999 999 8886 78888999999999988889999999999996 9999999999999999 899999
Q ss_pred CChHhHHHHHHHcCCCeeeecCC--HHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCC
Q 019012 190 GSSQKVDLLKNKLGFDEAFNYND--ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYH 265 (347)
Q Consensus 190 ~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 265 (347)
++++++++++ ++|+++++|+++ . ++.+.+++.+++++|++||++|+ ..++.++++++++ |+++.+|.....
T Consensus 223 ~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~--- 297 (373)
T 2fzw_A 223 INKDKFARAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG--- 297 (373)
T ss_dssp SCGGGHHHHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT---
T ss_pred CCHHHHHHHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCC---
Confidence 9999999999 999999999874 3 68888998887799999999997 6889999999999 999999975431
Q ss_pred CCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 266 DPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.....+...++.++ ++.|+....+. ..+.++++++++++|++++ .+..+++|+++++|++.+.+++. +|+||+
T Consensus 298 -~~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~ 372 (373)
T 2fzw_A 298 -EEIATRPFQLVTGR-TWKGTAFGGWK--SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVK 372 (373)
T ss_dssp -CCEEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEE
T ss_pred -ceeeeCHHHHhcCC-EEEEeccCCCC--cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEe
Confidence 11233445566677 88887654321 2567999999999999984 56778899999999999988775 699887
Q ss_pred e
Q 019012 344 V 344 (347)
Q Consensus 344 ~ 344 (347)
+
T Consensus 373 ~ 373 (373)
T 2fzw_A 373 I 373 (373)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=367.34 Aligned_cols=310 Identities=20% Similarity=0.246 Sum_probs=262.9
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhccc-ccccCCCCCCCCCCCCCCcee
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRG-RMRSSFTSSYIPPFVPGQPVE 81 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~-~~~~~~~~~~~~p~i~G~e~~ 81 (347)
.+++|||+++.++ +++ +.++ ++|.|+|. ++||||||.+++||++|++ .+.|.+. ..+|.++|||++
T Consensus 5 ~~~~mka~~~~~~--~~~----l~~~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~ 71 (374)
T 1cdo_A 5 KVIKCKAAVAWEA--NKP----LVIE--EIEVDVPH---ANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGA 71 (374)
T ss_dssp SCEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEE
T ss_pred CcceeEEEEEecC--CCC----eEEE--EeeCCCCC---CCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccce
Confidence 3567999999987 543 4554 46777664 9999999999999999999 8887543 456899999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCcce
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEE 110 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~ 110 (347)
| +|+++|++|++|++||||++. |+|+|
T Consensus 72 G--~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~ae 149 (374)
T 1cdo_A 72 G--IVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQ 149 (374)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBS
T ss_pred E--EEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCcccee
Confidence 8 999999999999999999853 78999
Q ss_pred eEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEE
Q 019012 111 YSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGS 188 (347)
Q Consensus 111 ~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~ 188 (347)
|+++|++. ++++ |++ ++++ +|+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 150 y~~v~~~~-~~~~-P~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~ 223 (374)
T 1cdo_A 150 YTVVNQIA-VAKI-DPS---APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAV 223 (374)
T ss_dssp EEEEEGGG-EEEC-CTT---CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEchhh-eEEC-CCC---CCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence 99999998 9999 999 8886 78888999999999988899999999999996 9999999999999999 89999
Q ss_pred ECChHhHHHHHHHcCCCeeeecCC--HHHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccC
Q 019012 189 AGSSQKVDLLKNKLGFDEAFNYND--ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSY 264 (347)
Q Consensus 189 ~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~ 264 (347)
+++++++++++ ++|+++++|+++ . ++.+.+++.+++++|++||++|+ ..++.++++++++ |+++.+|.....
T Consensus 224 ~~~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-- 299 (374)
T 1cdo_A 224 DLNPDKFEKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-- 299 (374)
T ss_dssp CSCGGGHHHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS--
T ss_pred cCCHHHHHHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCC--
Confidence 99999999999 999999999874 3 67888888887789999999997 6889999999999 999999975431
Q ss_pred CCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeecccccccHHHHHHHhhcCcccceEEE
Q 019012 265 HDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLENAPAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~~a~~~~~~~~~~gk~vv 342 (347)
....+...++.++ ++.|+....+. ..+.++++++++++|++++ .+..+++|+++++|++.+.+++. +|+||
T Consensus 300 ---~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi 372 (374)
T 1cdo_A 300 ---DVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVL 372 (374)
T ss_dssp ---CEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEE
T ss_pred ---CcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEE
Confidence 1233445666777 88887654321 2567899999999999984 56778899999999999988775 69998
Q ss_pred Ee
Q 019012 343 RV 344 (347)
Q Consensus 343 ~~ 344 (347)
++
T Consensus 373 ~~ 374 (374)
T 1cdo_A 373 SL 374 (374)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=370.04 Aligned_cols=304 Identities=18% Similarity=0.183 Sum_probs=241.9
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
|.+|||+++++. ++.+.+ .+.|.|+|. ++||||||.+++||++|++.+.|.+. ...+|.++|||++|
T Consensus 2 M~tMka~~~~~~------~~~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G- 68 (315)
T 3goh_A 2 MEQHQVWAYQTK------THSVTL--NSVDIPALA---ADDILVQNQAIGINPVDWKFIKANPI-NWSNGHVPGVDGAG- 68 (315)
T ss_dssp CCEEEEEEEETT------TTEEEE--EEEECCCCC---TTEEEEEEEEEEECHHHHHHHHHCTT-CCCTTCCCCSEEEE-
T ss_pred CcceEEEEEeCC------CCeeEE--EecCCCCCC---CCEEEEEEEEEecCHHHHHHHcCCCC-cCCCCCEeeeeeEE-
Confidence 456999999961 123444 557777774 99999999999999999999988653 24679999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~ 156 (347)
+|+++|+++++|++||||+++ |+|+||+++|++. ++++ |++ ++++ +|+++.+++|||+++ +.++++
T Consensus 69 -~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~al-~~~~~~ 141 (315)
T 3goh_A 69 -VIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDR-VMTL-PDN---LSFERAAALPCPLLTAWQAF-EKIPLT 141 (315)
T ss_dssp -EEEEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTS-EEEC-CTT---SCHHHHHTSHHHHHHHHHHH-TTSCCC
T ss_pred -EEEEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHH-hccC-cCC---CCHHHHhhCccHHHHHHHHH-hhcCCC
Confidence 999999999999999999984 8999999999998 9999 999 8886 678999999999999 889999
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|++|||+|+ |++|++++|+|+.+|++|++++ ++++.++++ ++|++++++ + . +.+ ++++|++|||+|
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-d-~----~~v----~~g~Dvv~d~~g 208 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-E-P----SQV----TQKYFAIFDAVN 208 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-S-G----GGC----CSCEEEEECC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-C-H----HHh----CCCccEEEECCC
Confidence 9999999999 9999999999999999999999 889999999 999998884 1 1 122 448999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccc---hhHHHHHHHHHHHHCCceee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH---LYPRFLDYVISNYKQGKIVY 313 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~g~i~~ 313 (347)
++....++++++++|+++.+|..... .........+..+++++.++.....+. ...+.++++++++++|++++
T Consensus 209 ~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~ 284 (315)
T 3goh_A 209 SQNAAALVPSLKANGHIICIQDRIPA----PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEI 284 (315)
T ss_dssp -----TTGGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred chhHHHHHHHhcCCCEEEEEeCCCCc----cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCccc
Confidence 98778899999999999999754321 001111122334455555544322222 33567899999999999999
Q ss_pred eeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 314 VEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 314 ~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
.+..+++|+++++|++.+. +..||+||++++
T Consensus 285 ~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~ 315 (315)
T 3goh_A 285 AAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE 315 (315)
T ss_dssp CCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred ccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence 9999999999999999998 667899999874
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=365.23 Aligned_cols=303 Identities=20% Similarity=0.211 Sum_probs=263.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC-CCCCCCCCCCceecceE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS-SYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~g~ 85 (347)
|||++++++ |++ +.+ .++|.|+|. ++||||||.|++||++|++.++|.+.. ...+|.++|||++| +
T Consensus 1 MkA~~~~~~--g~~----l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G--~ 67 (345)
T 3jv7_A 1 MKAVQYTEI--GSE----PVV--VDIPTPTPG---PGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVG--T 67 (345)
T ss_dssp CEEEEECST--TSC----CEE--EECCCCCCC---TTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEE--E
T ss_pred CeEEEEcCC--CCc----eEE--EEecCCCCC---CCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEE--E
Confidence 799999998 654 455 457778774 999999999999999999999886532 24569999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEE-----------------------------------ecCcceeEEee-ccccceecCCCCCC
Q 019012 86 SKVVDSDNPNFKPGDLVAG-----------------------------------LTGWEEYSLIR-KTEQLRKIQPDHHI 129 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~-~~~~~~~i~p~~~~ 129 (347)
|+++|++|++|++||+|++ .|+|+||+++| ++. ++++ |+-
T Consensus 68 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~-~~~~-p~~-- 143 (345)
T 3jv7_A 68 VAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARH-LVPI-GDL-- 143 (345)
T ss_dssp EEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGG-EEEC-TTC--
T ss_pred EEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhc-eEeC-CCC--
Confidence 9999999999999999986 37999999999 777 9998 763
Q ss_pred Chhhh-hhhcCChhhhHHHHHHh-hcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCe
Q 019012 130 PLSYH-IGLLGMPGFTAYAGFHE-VCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDE 206 (347)
Q Consensus 130 ~~~~~-~a~l~~~~~ta~~al~~-~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~ 206 (347)
+++ +|+++.+++|||+++.+ ...+++|++|||+|+ |++|++++|+|+.+ |++|++++++++|+++++ ++|+++
T Consensus 144 --~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa~~ 219 (345)
T 3jv7_A 144 --DPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADA 219 (345)
T ss_dssp --CHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTCSE
T ss_pred --CHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCE
Confidence 554 78899999999999976 458999999999997 99999999999999 669999999999999999 999999
Q ss_pred eeecCCHHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEee
Q 019012 207 AFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284 (347)
Q Consensus 207 vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
++++++ ++.+.+++.+++ ++|++||++|++ .++.++++++++|+++.+|..... ....+. .++.+++++.
T Consensus 220 ~i~~~~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~~i~ 291 (345)
T 3jv7_A 220 AVKSGA--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGASVV 291 (345)
T ss_dssp EEECST--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTCEEE
T ss_pred EEcCCC--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCCEEE
Confidence 999876 788889999888 999999999986 899999999999999999976542 112233 6778899999
Q ss_pred ccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
++.... .+.++++++++++|.+++. ..+++++++++|++.+.+++..||+||++
T Consensus 292 g~~~~~-----~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 292 TPYWGT-----RSELMEVVALARAGRLDIH-TETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp CCCSCC-----HHHHHHHHHHHHTTCCCCC-EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred EEecCC-----HHHHHHHHHHHHcCCCceE-EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 987765 6789999999999999984 47889999999999999999999999864
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-50 Score=364.72 Aligned_cols=307 Identities=19% Similarity=0.211 Sum_probs=260.2
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceec
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEG 82 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G 82 (347)
++|||++++++ + .+.+ .++|.|+|. ++||||||.++|||++|++.+.+...+ ...+|.++|||++|
T Consensus 6 ~~mka~~~~~~--~-----~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G 73 (356)
T 1pl8_A 6 PNNLSLVVHGP--G-----DLRL--ENYPIPEPG---PNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASG 73 (356)
T ss_dssp CCCEEEEEEET--T-----EEEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEE
T ss_pred cCceEEEEecC--C-----cEEE--EEccCCCCC---CCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEE
Confidence 45899999985 3 3344 557778774 999999999999999999888753211 13468999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCCh
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIPL 131 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~ 131 (347)
+|+++|++|++|++||||++ .|+|+||+++|++. ++++ |++ +
T Consensus 74 --~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~---l 146 (356)
T 1pl8_A 74 --TVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDN---V 146 (356)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT---S
T ss_pred --EEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHH-EEEC-cCC---C
Confidence 99999999999999999986 38999999999998 9999 999 8
Q ss_pred hhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
+++.|++..+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|+++++|+
T Consensus 147 ~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~ 223 (356)
T 1pl8_A 147 TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI 223 (356)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred CHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcC
Confidence 887555557899999999 7789999999999996 9999999999999999 9999999999999999 9999999998
Q ss_pred C---CHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecc
Q 019012 211 N---DETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286 (347)
Q Consensus 211 ~---~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
+ .. ++.+.+++.+++++|++||++|+. .++.++++++++|+++.+|.... ....+...++.+++++.|+
T Consensus 224 ~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~ 296 (356)
T 1pl8_A 224 SKESPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGV 296 (356)
T ss_dssp SSCCHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEEC
T ss_pred cccccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHhcceEEEEe
Confidence 8 34 788888887766899999999975 78999999999999999986322 1234556788899999987
Q ss_pred ccccccchhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 287 LQSDYLHLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
... .+.++++++++++|+++ +.+..+|+|+++++|++.+.++ ..+|+||+++++
T Consensus 297 ~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~ 352 (356)
T 1pl8_A 297 FRY------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS 352 (356)
T ss_dssp CSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred ccc------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence 653 23478899999999975 5567788999999999999988 778999998764
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=365.22 Aligned_cols=308 Identities=19% Similarity=0.196 Sum_probs=258.9
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCcee
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVE 81 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~ 81 (347)
+++|||++++++ + .+.+ .++|.|+|. ++||||||.|++||++|++.+.+...+ ...+|.++|||++
T Consensus 2 ~~~mka~~~~~~--~-----~l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~ 69 (352)
T 1e3j_A 2 ASDNLSAVLYKQ--N-----DLRL--EQRPIPEPK---EDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEAS 69 (352)
T ss_dssp --CCEEEEEEET--T-----EEEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred cccCEEEEEEcC--C-----cEEE--EEecCCCCC---CCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccce
Confidence 456999999985 3 3344 557888774 999999999999999999887743221 1346899999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccceecCCCCCCC
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQLRKIQPDHHIP 130 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~ 130 (347)
| +|+++|++|++|++||||++ .|+|+||+++++++ ++++ |++
T Consensus 70 G--~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~--- 142 (352)
T 1e3j_A 70 G--TVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDN--- 142 (352)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT---
T ss_pred E--EEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHH-eEEC-cCC---
Confidence 8 99999999999999999986 38999999999998 9999 999
Q ss_pred hhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 131 ~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
++++.|++..+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ ++|+++++|+
T Consensus 143 ~~~~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~ 219 (352)
T 1e3j_A 143 VSLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVV 219 (352)
T ss_dssp SCHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred CCHHHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcC
Confidence 8887555667899999999 7789999999999996 99999999999999999999999999999999 9999999998
Q ss_pred CC-HHHHHHHHHHHCC---C-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEee
Q 019012 211 ND-ETDLVAALKRCFP---Q-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284 (347)
Q Consensus 211 ~~-~~~~~~~i~~~~~---g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
++ . ++.+.+++.++ + ++|++||++|+. .++.++++++++|+++.+|.... ....+...++.+++++.
T Consensus 220 ~~~~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~ 292 (352)
T 1e3j_A 220 DPAK-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIK 292 (352)
T ss_dssp CTTT-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEE
T ss_pred cccc-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEE
Confidence 84 4 67777887775 4 899999999975 78999999999999999987432 12345567888999998
Q ss_pred ccccccccchhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhcCc-ccceEEEEecC
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFSGK-NVGKQVVRVAC 346 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~~-~~gk~vv~~~~ 346 (347)
++... .+.++++++++++|+++ +.+..+|+|+++++|++.+.+++ ..+|+||++++
T Consensus 293 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 351 (352)
T 1e3j_A 293 SVFRY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ 351 (352)
T ss_dssp ECCSC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred Eeccc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence 87653 23488999999999875 45677889999999999999887 57899998864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=379.58 Aligned_cols=318 Identities=21% Similarity=0.224 Sum_probs=266.9
Q ss_pred cccccceEEEecccCCC---------CCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhccccc-----------
Q 019012 3 EQVENKQVIFRGYIEGA---------PKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRM----------- 62 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~---------~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~----------- 62 (347)
++.+|||++++.+ +. ...+.+.+ .++|.|+|. ++||||||.|+|||++|++..
T Consensus 21 ~p~tmkA~v~~~~--~~~~~~~~~~~~~~~~l~~--~e~p~P~~~---~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~ 93 (447)
T 4a0s_A 21 VPDTYLALHLRAE--DADMFKGVADKDVRKSLRL--GEVPMPELA---PDEVLVAVMASSINYNTVWSAMFEPIPTFHFL 93 (447)
T ss_dssp CCSEEEEEEEEGG--GTTTTTTCSSCCHHHHCEE--EEEECCCCC---TTEEEEEEEEEECCHHHHHHHTTCSSCHHHHH
T ss_pred CChhheeeeeecc--ccccccccccCCCCCCceE--EeccCCCCC---CCeEEEEEEEEEECcHHhhhhccCcccchhhh
Confidence 5788999999998 51 00123455 557777774 999999999999999997432
Q ss_pred -----ccCCCCCCCCC-CCCCCceecceEEEEeccCCCCCCCCCEEEE------------------------------ec
Q 019012 63 -----RSSFTSSYIPP-FVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------------------------LT 106 (347)
Q Consensus 63 -----~~~~~~~~~~p-~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~------------------------------~g 106 (347)
.+.+......| .++|||++| +|+++|++|++|++||+|++ .|
T Consensus 94 ~~~~~~g~~~~~~~~P~~v~GhE~~G--~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G 171 (447)
T 4a0s_A 94 KQNARQGGWATRHDQPYHVLGSDCSG--VVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFG 171 (447)
T ss_dssp HHHHTTCGGGGGGCCSEEECCSCEEE--EEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSC
T ss_pred hhhcccCccccccCCCCcccccceeE--EEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCC
Confidence 12221122345 699999888 99999999999999999997 38
Q ss_pred CcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 019012 107 GWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEV--CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183 (347)
Q Consensus 107 ~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~--~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~ 183 (347)
+|+||+++|+++ ++++ |++ ++++ +|+++.+++|||+++... +++++|++|||+||+|++|++++|+|+..|+
T Consensus 172 ~~aey~~v~~~~-~~~i-P~~---ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga 246 (447)
T 4a0s_A 172 GLAEYGVVRASQ-LLPK-PAH---LTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG 246 (447)
T ss_dssp SSBSEEEEEGGG-EEEC-CTT---SCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred ceeeeeecCHHH-cEEC-CCC---CCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 999999999998 9999 999 8886 677888999999999643 8899999999999999999999999999999
Q ss_pred EEEEEECChHhHHHHHHHcCCCeeeecCCHHH------------------HHHHHHHHCCCCccEEEeCCChhhHHHHHH
Q 019012 184 YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETD------------------LVAALKRCFPQGIDIYFDNVGGEMLDAALL 245 (347)
Q Consensus 184 ~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~------------------~~~~i~~~~~g~~d~vid~~g~~~~~~~~~ 245 (347)
+|+++++++++++.++ ++|++.++|+.+. + +.+.+++.+++++|++||++|++.++.+++
T Consensus 247 ~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~ 324 (447)
T 4a0s_A 247 IPVAVVSSAQKEAAVR-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVI 324 (447)
T ss_dssp EEEEEESSHHHHHHHH-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHH-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHH
Confidence 9999999999999998 9999999987543 2 367788888448999999999999999999
Q ss_pred hhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHH
Q 019012 246 NMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAP 325 (347)
Q Consensus 246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ 325 (347)
+++++|+++.+|...+. ....+...++.+++++.|+.... .+.+.++++++++|.+++.+..+|+|++++
T Consensus 325 ~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~ 394 (447)
T 4a0s_A 325 VARRGGTVVTCGSSSGY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAA 394 (447)
T ss_dssp HSCTTCEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHH
T ss_pred HHhcCCEEEEEecCCCc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHH
Confidence 99999999999976432 22345667888899999987765 456778999999999999998999999999
Q ss_pred HHHHHhhcCcccceEEEEecC
Q 019012 326 AAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 326 ~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+||+.+.+++..||+||.+.+
T Consensus 395 ~A~~~~~~~~~~GKvvv~~~~ 415 (447)
T 4a0s_A 395 EACRVVQTSRQVGKVAVLCMA 415 (447)
T ss_dssp HHHHHHHTTCCSSEEEEESSC
T ss_pred HHHHHHhcCCCceEEEEEeCC
Confidence 999999999989999998754
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=360.20 Aligned_cols=339 Identities=58% Similarity=1.017 Sum_probs=272.1
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCC---CCCCCCCCCc
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSS---YIPPFVPGQP 79 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~---~~~p~i~G~e 79 (347)
|+.+||+++++....+.|...++.++..++|.|.|.+ ++||||||.|+++|+.|. .+.|.+... ..+|.++|||
T Consensus 1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~--~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e 77 (345)
T 2j3h_A 1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEG--TNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQP 77 (345)
T ss_dssp CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSS--SSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSB
T ss_pred CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCC--CCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCe
Confidence 4567999999987545442115777644566665235 999999999999998885 444533211 2468999999
Q ss_pred eecceEEEE--eccCCCCCCCCCEEEEecCcceeEEeeccc-cceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCC
Q 019012 80 VEGFGVSKV--VDSDNPNFKPGDLVAGLTGWEEYSLIRKTE-QLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 80 ~~G~g~v~~--vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~ 156 (347)
++| ++.+ ||+++++|++||||+++|+|+||++++++. .++++ |+..+++++++|+++.+++|||+++.+.++++
T Consensus 78 ~~G--~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~ 154 (345)
T 2j3h_A 78 IQG--YGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPK 154 (345)
T ss_dssp CEE--EEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCC
T ss_pred eec--ceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCC
Confidence 888 6666 999999999999999999999999998653 27888 86224467678899999999999998888999
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|++|||+|++|++|++++|+++..|++|+++++++++.+.+++++|++.++|+++.+++.+.+++.+++++|++||++|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 99999999999999999999999999999999999999998874699998999875225677788877568999999999
Q ss_pred hhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceeeeee
Q 019012 237 GEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVED 316 (347)
Q Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~ 316 (347)
+..++.++++++++|+++.+|.....+........+...++.+++++.|+....++....+.++++++++++|++++.+.
T Consensus 235 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~ 314 (345)
T 2j3h_A 235 GKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVED 314 (345)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEE
T ss_pred HHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCccc
Confidence 98899999999999999999976542111111233445678889999987665544445677999999999999998887
Q ss_pred cccccccHHHHHHHhhcCcccceEEEEecCC
Q 019012 317 MNEGLENAPAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 317 ~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
.+++|+++++|++.+.+++..||+||++++|
T Consensus 315 ~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~ 345 (345)
T 2j3h_A 315 VADGLEKAPEALVGLFHGKNVGKQVVVVARE 345 (345)
T ss_dssp EEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred ccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence 7889999999999999998889999998765
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=370.23 Aligned_cols=311 Identities=15% Similarity=0.097 Sum_probs=263.1
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
|.++.+|||++++++ |.+ +.+.+.++|.|+|. ++||||||.+++||++|++.+.|.+. ...+|.++|||+
T Consensus 1 M~~p~~mka~~~~~~--~~~----l~~~~~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~GhE~ 70 (360)
T 1piw_A 1 MSYPEKFEGIAIQSH--EDW----KNPKKTKYDPKPFY---DHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEI 70 (360)
T ss_dssp CCTTTCEEEEEECCS--SST----TSCEEEEECCCCCC---TTEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCE
T ss_pred CCCChheEEEEEecC--CCC----eeEEeccccCCCCC---CCeEEEEEEEeccchhhHHHhcCCCC-CCCCCcccCcCc
Confidence 778889999999997 533 34544227777774 99999999999999999999988542 234689999998
Q ss_pred ecceEEEEeccCCC-CCCCCCEEEE--------------------------------------ecCcceeEEeeccccce
Q 019012 81 EGFGVSKVVDSDNP-NFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLR 121 (347)
Q Consensus 81 ~G~g~v~~vg~~v~-~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 121 (347)
+| +|+++|++|+ +|++||||+. .|+|+||+++|++. ++
T Consensus 71 ~G--~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~ 147 (360)
T 1piw_A 71 VG--KVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VV 147 (360)
T ss_dssp EE--EEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EE
T ss_pred eE--EEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhh-eE
Confidence 88 9999999999 9999999942 27899999999998 99
Q ss_pred ecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH
Q 019012 122 KIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN 200 (347)
Q Consensus 122 ~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~ 200 (347)
++ |++ ++++ +|+++.++.|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++
T Consensus 148 ~i-P~~---~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~- 220 (360)
T 1piw_A 148 PI-PEN---IPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM- 220 (360)
T ss_dssp EC-CTT---SCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-
T ss_pred EC-CCC---CCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-
Confidence 99 999 8886 78899999999999965 89999999999998 99999999999999999999999999999999
Q ss_pred HcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh---hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHh
Q 019012 201 KLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG---EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLV 277 (347)
Q Consensus 201 ~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 277 (347)
++|+++++|+++..++.+.+ . +++|++||++|+ ..++.++++++++|+++.+|.... ....+...++
T Consensus 221 ~lGa~~v~~~~~~~~~~~~~---~-~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~ 290 (360)
T 1piw_A 221 KMGADHYIATLEEGDWGEKY---F-DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYG 290 (360)
T ss_dssp HHTCSEEEEGGGTSCHHHHS---C-SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGG
T ss_pred HcCCCEEEcCcCchHHHHHh---h-cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC------ccccCHHHHH
Confidence 89999999986420233333 2 579999999998 678899999999999999987532 0123444677
Q ss_pred hcceEeeccccccccchhHHHHHHHHHHHHCCceeeeeeccccccc--HHHHHHHhhcCcccceEEEEecCC
Q 019012 278 TKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLEN--APAAFVGLFSGKNVGKQVVRVACE 347 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~--~~~a~~~~~~~~~~gk~vv~~~~~ 347 (347)
.+++++.|+.... .+.++++++++++|++++.+ .+++|++ +++|++.+.+++..||+||+++++
T Consensus 291 ~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~ 356 (360)
T 1piw_A 291 LKAVSISYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDK 356 (360)
T ss_dssp CBSCEEEECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCHH
T ss_pred hCCeEEEEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCcc
Confidence 8899999877654 56789999999999999887 7889999 999999999888889999998763
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=363.02 Aligned_cols=306 Identities=17% Similarity=0.140 Sum_probs=259.7
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhccc-ccccCCCCCCCCCCCCCCceecceE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRG-RMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~-~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
|||++++++ ++ +.+ .++|.|+|. ++||||||.+++||++|++ .+.|.+. ..+|.++|||++| +
T Consensus 1 MkA~~~~~~--~~-----~~~--~e~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~p~v~G~E~~G--~ 64 (352)
T 3fpc_A 1 MKGFAMLSI--GK-----VGW--IEKEKPAPG---PFDAIVRPLAVAPCTSDIHTVFEGAIG--ERHNMILGHEAVG--E 64 (352)
T ss_dssp CEEEEEEET--TE-----EEE--EECCCCCCC---TTCEEEEEEEEECCHHHHHHHHSCTTC--CCSSEECCCEEEE--E
T ss_pred CeEEEEccC--CC-----ceE--EeCCCCCCC---CCeEEEEeCEEeEcccchHHHhCCCCC--CCCCcccCCcceE--E
Confidence 799999997 53 344 468888775 9999999999999999998 5577543 3569999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEE---------------------------------ecCcceeEEeecc--ccceecCCCCCCC
Q 019012 86 SKVVDSDNPNFKPGDLVAG---------------------------------LTGWEEYSLIRKT--EQLRKIQPDHHIP 130 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~ 130 (347)
|+++|++|++|++||||++ .|+|+||+.+++. . ++++ |++
T Consensus 65 V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~-~~~i-P~~--- 139 (352)
T 3fpc_A 65 VVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMN-LAHL-PKE--- 139 (352)
T ss_dssp EEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHH-CEEC-CTT---
T ss_pred EEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCe-EEEC-CCC---
Confidence 9999999999999999994 3899999999975 6 9999 999
Q ss_pred hhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeee
Q 019012 131 LSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAF 208 (347)
Q Consensus 131 ~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi 208 (347)
++++ +|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++ ++|+++++
T Consensus 140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi 216 (352)
T 3fpc_A 140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGATDII 216 (352)
T ss_dssp SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTCCEEE
T ss_pred CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEE
Confidence 8886 677789999999999 7799999999999996 9999999999999999 8999999999999999 99999999
Q ss_pred ecCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccc--hHHHhhcceEee
Q 019012 209 NYNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN--LFTLVTKRITMK 284 (347)
Q Consensus 209 ~~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 284 (347)
|+++. ++.+.+++.+++ ++|++||++|+ +.++.++++++++|+++.+|..... ...... ......++.++.
T Consensus 217 ~~~~~-~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~~~~~~~i~ 291 (352)
T 3fpc_A 217 NYKNG-DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG----DNIDIPRSEWGVGMGHKHIH 291 (352)
T ss_dssp CGGGS-CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSC----SEEEEETTTTGGGTBCEEEE
T ss_pred cCCCc-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCC----CceecchhHhhhhccccEEE
Confidence 99886 899999999988 89999999998 6899999999999999999975432 111111 122345778888
Q ss_pred ccccccccchhHHHHHHHHHHHHCCceeee--eecccc-cccHHHHHHHhhcCccc-ceEEEEec
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIVYV--EDMNEG-LENAPAAFVGLFSGKNV-GKQVVRVA 345 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~-l~~~~~a~~~~~~~~~~-gk~vv~~~ 345 (347)
++.... ..+.++++++++++|++++. ++.+++ |+++++|++.+.+++.. +|+||+++
T Consensus 292 g~~~~~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 292 GGLCPG----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp EBCCCC----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred EeeccC----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 876532 14568999999999999975 667888 99999999999987654 79999874
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=364.44 Aligned_cols=309 Identities=17% Similarity=0.109 Sum_probs=257.6
Q ss_pred ccccccceEEEecccCCCCCCCCeEEEEeecccC--------CCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCC
Q 019012 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLK--------APKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYI 71 (347)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p--------~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~ 71 (347)
.++++|||+++..+ +.+.+ .++|.| ++. ++||||||.|++||++|++.+.+...+ ...
T Consensus 4 ~~~~~mka~~~~~~-------~~l~~--~~~~~P~~~~~~~~~~~---~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~ 71 (363)
T 3m6i_A 4 SASKTNIGVFTNPQ-------HDLWI--SEASPSLESVQKGEELK---EGEVTVAVRSTGICGSDVHFWKHGCIGPMIVE 71 (363)
T ss_dssp -CCSCCEEEEECTT-------CCEEE--EECSSCHHHHHHTCSCC---TTEEEEEEEEEECCHHHHHHHHHSBSSSCBCC
T ss_pred CCcccceeEEEeCC-------CcEEE--EEecCCccccccCCCcC---CCeEEEEEeEEeecHhhHHHHcCCCCCCccCC
Confidence 45678999999875 23455 557888 775 999999999999999999888753322 235
Q ss_pred CCCCCCCceecceEEEEeccCCCCCCCCCEEEE-------------------------------ecCcceeEEeeccccc
Q 019012 72 PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG-------------------------------LTGWEEYSLIRKTEQL 120 (347)
Q Consensus 72 ~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~ 120 (347)
+|.++|||++| +|+++|++|++|++||||++ .|+|+||+++|++. +
T Consensus 72 ~p~v~G~E~~G--~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~-~ 148 (363)
T 3m6i_A 72 CDHVLGHESAG--EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVW-C 148 (363)
T ss_dssp SCEECCCEEEE--EEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGG-E
T ss_pred CCcccCcceEE--EEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhh-E
Confidence 69999999888 99999999999999999985 38999999999998 9
Q ss_pred eecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHH
Q 019012 121 RKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLK 199 (347)
Q Consensus 121 ~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~ 199 (347)
+++ |+ ++++.|++..+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |++++.+++++++++
T Consensus 149 ~~i-P~----~s~~~aa~~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 221 (363)
T 3m6i_A 149 HKI-GN----MSYENGAMLEPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK 221 (363)
T ss_dssp EEC-TT----CCHHHHHHHHHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred EEC-CC----CCHHHHHhhhHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 999 86 3665333446899999999 7789999999999997 99999999999999996 999999999999999
Q ss_pred HHcCCCeeeecC----CHHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccch
Q 019012 200 NKLGFDEAFNYN----DETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL 273 (347)
Q Consensus 200 ~~~g~~~vi~~~----~~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 273 (347)
++ ++.+++++ ..+++.+.+++.+++ ++|++||++|++ .++.++++++++|+++.+|..... ...+.
T Consensus 222 -~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~ 293 (363)
T 3m6i_A 222 -EI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE------IQIPF 293 (363)
T ss_dssp -HH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC------CCCCH
T ss_pred -Hh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC------ccccH
Confidence 88 66666654 223889999999987 999999999986 789999999999999999975431 23556
Q ss_pred HHHhhcceEeeccccccccchhHHHHHHHHHHHHCCcee--eeeecccccccHHHHHHHhhcC-cccceEEEEecC
Q 019012 274 FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV--YVEDMNEGLENAPAAFVGLFSG-KNVGKQVVRVAC 346 (347)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~~a~~~~~~~-~~~gk~vv~~~~ 346 (347)
..++.+++++.++... .+.++++++++++|+++ +.++.+|+|+++++||+.+.++ ...+|+||++++
T Consensus 294 ~~~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 294 MRASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp HHHHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred HHHHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 6888899999987654 34578899999999994 4577888999999999999987 567899999864
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-49 Score=359.51 Aligned_cols=308 Identities=18% Similarity=0.184 Sum_probs=256.4
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
|.++++|+++.+.+. + ..+.+ .++|.|+|. ++||||||.+++||++|++.+.|.+. ...+|.++|||+
T Consensus 4 m~~~m~~~a~~~~~~----~--~~l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~ 71 (357)
T 2cf5_A 4 MEAERKTTGWAARDP----S--GILSP--YTYTLRETG---PEDVNIRIICCGICHTDLHQTKNDLG-MSNYPMVPGHEV 71 (357)
T ss_dssp --CCCEEEEEEECST----T--CCEEE--EEEECCCCC---TTEEEEEEEEEEECHHHHHHHTCTTT-CCCSSBCCCCEE
T ss_pred ccCcceeEEEEEccC----C--CCcEE--EEecCCCCC---CCEEEEEEEEEeecchhhhhhcCCCC-CCCCCeecCcce
Confidence 334555666666542 2 24555 457778774 99999999999999999999888543 235689999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEE--------------------------------------ecCcceeEEeecccccee
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLRK 122 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~ 122 (347)
+| +|+++|++|++|++||||++ .|+|+||+++|++. +++
T Consensus 72 ~G--~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~ 148 (357)
T 2cf5_A 72 VG--EVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKF-VVK 148 (357)
T ss_dssp EE--EEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGG-EEE
T ss_pred eE--EEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhh-EEE
Confidence 88 99999999999999999973 37999999999998 999
Q ss_pred cCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH
Q 019012 123 IQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPK-SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN 200 (347)
Q Consensus 123 i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~-~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~ 200 (347)
+ |++ ++++ +|+++..+.|||+++. ..+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++
T Consensus 149 ~-P~~---ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~ 222 (357)
T 2cf5_A 149 I-PEG---MAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ 222 (357)
T ss_dssp C-CSS---CCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT
T ss_pred C-cCC---CCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Confidence 9 999 8886 7889999999999995 47788 9999999996 999999999999999999999999998888776
Q ss_pred HcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhc
Q 019012 201 KLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTK 279 (347)
Q Consensus 201 ~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
++|+++++|+++. + .+++.+ +++|++||++|+. .++.++++++++|+++.+|..... ....+.. ++.+
T Consensus 223 ~lGa~~vi~~~~~-~---~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~~~~ 291 (357)
T 2cf5_A 223 DLGADDYVIGSDQ-A---KMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-LMLG 291 (357)
T ss_dssp TSCCSCEEETTCH-H---HHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-HHHH
T ss_pred HcCCceeeccccH-H---HHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-HHhC
Confidence 8999999998864 3 455555 3799999999975 789999999999999999975431 1113444 8889
Q ss_pred ceEeeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 280 RITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
++++.|+.... .+.++++++++++|++++.+ .+++|+++++|++.+.+++..+|+||++++
T Consensus 292 ~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 292 RKVITGSFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp TCEEEECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred ccEEEEEccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 99999987654 56789999999999999876 578999999999999998888999998864
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-50 Score=364.34 Aligned_cols=305 Identities=18% Similarity=0.198 Sum_probs=260.2
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGFG 84 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~g 84 (347)
|||++++++ |++ +.++ ++|.|+|. ++||||||.|++||++|++.+.|.+.. ...+|.++|||++|
T Consensus 1 Mka~~~~~~--g~~----l~~~--~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-- 67 (343)
T 2dq4_A 1 MRALAKLAP--EEG----LTLV--DRPVPEPG---PGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSG-- 67 (343)
T ss_dssp CEEEEECSS--SSS----CEEE--ECCCCCCC---TTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEE--
T ss_pred CeEEEEeCC--CCc----EEEE--eccCCCCC---CCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceE--
Confidence 689999987 643 4554 57888774 999999999999999999988875320 23568999999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH 134 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~ 134 (347)
+|+++|++|++|++||||++. |+|+||++++++. ++++ |++ ++++
T Consensus 68 ~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~ 142 (343)
T 2dq4_A 68 VVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN-AWVN-PKD---LPFE 142 (343)
T ss_dssp EEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTT---SCHH
T ss_pred EEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHH-eEEC-CCC---CCHH
Confidence 999999999999999999972 7999999999998 9999 999 8887
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
.|++..+++|||+++.+.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++ +++++|+++.
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~~~~ 218 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNPLEE 218 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECTTTS
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCcCcc
Confidence 554557889999999647889 9999999999 9999999999999999 9999999999999998 88 9999999876
Q ss_pred HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccch-HHHhhcceEeeccccccc
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNL-FTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 291 (347)
++.+.+++.+++++|++||++|+ ..++.++++++++|+++.+|.... ....+. ..++.+++++.|+....
T Consensus 219 -~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~- 290 (343)
T 2dq4_A 219 -DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAGRR- 290 (343)
T ss_dssp -CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCSCC-
T ss_pred -CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeecCC-
Confidence 88888988883389999999998 789999999999999999987432 123445 67788999999876541
Q ss_pred cchhHHHHHHHHHHHHCCce--eeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 292 LHLYPRFLDYVISNYKQGKI--VYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i--~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
..+.++++++++++|++ ++.+..+|+|+++++|++.+.+++. +|+||+++
T Consensus 291 ---~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~ 342 (343)
T 2dq4_A 291 ---LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK 342 (343)
T ss_dssp ---TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred ---CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence 14678999999999995 5667788899999999999998877 99999875
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=369.22 Aligned_cols=311 Identities=16% Similarity=0.159 Sum_probs=263.9
Q ss_pred ccceEEEecccCCCCCCCCe---------------------EEEEeecccCC-CCCCCCCcEEEEEEEeecChhcccccc
Q 019012 6 ENKQVIFRGYIEGAPKETDM---------------------EIKISGIQLKA-PKGSDSGAFLVKNLYLSCDPYMRGRMR 63 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~---------------------~~~~~~~~~p~-~~~~~~~~vlV~v~~~~i~~~D~~~~~ 63 (347)
+|||++++++ +.|.+... .++..++|.|+ | + ++||||||.|++||++|++.+.
T Consensus 2 ~m~a~~~~~~--~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~-~--~~eVlVkv~a~gi~~~D~~~~~ 76 (404)
T 3ip1_A 2 SLRAVRLHAK--WDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIE-K--PTEIIIKVKACGICGSDVHMAQ 76 (404)
T ss_dssp CEEEEEEEEE--ECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCC-S--TTEEEEEEEEEECCHHHHHHHC
T ss_pred cceEEEecCC--CCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCC-C--cCEEEEEEeEeeeCHHHHHHhc
Confidence 4799999998 77753322 45666788887 6 4 9999999999999999999887
Q ss_pred cCCC------CCCCCCCCCCCceecceEEEEeccCC------CCCCCCCEEEE---------------------------
Q 019012 64 SSFT------SSYIPPFVPGQPVEGFGVSKVVDSDN------PNFKPGDLVAG--------------------------- 104 (347)
Q Consensus 64 ~~~~------~~~~~p~i~G~e~~G~g~v~~vg~~v------~~~~~Gd~V~~--------------------------- 104 (347)
|... +...+|.++|||++| +|+++|++| ++|++||||++
T Consensus 77 g~~~~~~~~~~~~~~P~i~G~E~~G--~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g 154 (404)
T 3ip1_A 77 TDEEGYILYPGLTGFPVTLGHEFSG--VVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELG 154 (404)
T ss_dssp BCTTSBBSCCSCBCSSEECCCEEEE--EEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBT
T ss_pred CCCCccccccccCCCCcccCccceE--EEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccC
Confidence 6421 223568999999888 999999999 89999999997
Q ss_pred ---ecCcceeEEeeccccceecCCCCCCChh-------hhhhhcCChhhhHHHHHHhh-cCCCCCCEEEEEcCCchHHHH
Q 019012 105 ---LTGWEEYSLIRKTEQLRKIQPDHHIPLS-------YHIGLLGMPGFTAYAGFHEV-CSPKSGEYVFVSAASGAVGQL 173 (347)
Q Consensus 105 ---~g~~~~~~~v~~~~~~~~i~p~~~~~~~-------~~~a~l~~~~~ta~~al~~~-~~~~~~~~vLI~Ga~g~~G~~ 173 (347)
.|+|+||++++++. ++++ |++ ++ .++|+++.+++|||+++... +++++|++|||+|+ |++|++
T Consensus 155 ~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~ 228 (404)
T 3ip1_A 155 FNVDGAFAEYVKVDAKY-AWSL-REL---EGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLA 228 (404)
T ss_dssp TTBCCSSBSEEEEEGGG-EEEC-GGG---BTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHH
T ss_pred CCCCCCCcceEEechHH-eEec-ccc---ccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHH
Confidence 38999999999998 9999 987 42 35889999999999999655 48999999999997 999999
Q ss_pred HHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh--hHHHHHHhh--
Q 019012 174 VGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE--MLDAALLNM-- 247 (347)
Q Consensus 174 ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~--~~~~~~~~l-- 247 (347)
++|+|+.+|+ +|++++.+++++++++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+. .+..++++|
T Consensus 229 aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~ 306 (404)
T 3ip1_A 229 AVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWR 306 (404)
T ss_dssp HHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHh
Confidence 9999999999 9999999999999999 9999999999886 899999999988 999999999986 677788888
Q ss_pred --hcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCceee--eeeccccccc
Q 019012 248 --RDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIVY--VEDMNEGLEN 323 (347)
Q Consensus 248 --~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~ 323 (347)
+++|+++.+|..... ...+...++.+++++.|+..... .+.++++++++++| +++ .+..+|+|++
T Consensus 307 ~~~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~ 375 (404)
T 3ip1_A 307 ARGINATVAIVARADAK------IPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISKTVSMEE 375 (404)
T ss_dssp CSCCCCEEEECSCCCSC------EEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCEEECGGG
T ss_pred ccCCCcEEEEeCCCCCC------CcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEEEeeHHH
Confidence 999999999986542 24567788899999999875331 34588999999999 764 4667889999
Q ss_pred HHHHHHHhhcCcccceEEEEecC
Q 019012 324 APAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 324 ~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+++|++.+. .||+||++++
T Consensus 376 ~~~A~~~~~----~GKvvl~~~~ 394 (404)
T 3ip1_A 376 IPEYIKRLQ----TDKSLVKVTM 394 (404)
T ss_dssp HHHHHHHTT----TCTTCSCEEE
T ss_pred HHHHHHHHh----CCcEEEecCC
Confidence 999999987 4688887764
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=359.79 Aligned_cols=313 Identities=24% Similarity=0.319 Sum_probs=252.4
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
.+|||++++++ |.+. .++..+.|.|+|. ++||+|||.+++||++|++.+.|.+.....+|.++|||++|
T Consensus 2 ~~mka~~~~~~--g~~~----~l~~~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G-- 70 (328)
T 1xa0_A 2 SAFQAFVVNKT--ETEF----TAGVQTISMDDLP---EGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAG-- 70 (328)
T ss_dssp CEEEEEEEEEE--TTEE----EEEEEEEEGGGSC---SCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEE--
T ss_pred CcceEEEEecC--CCcc----eeEEEeccCCCCC---CCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEE--
Confidence 46999999998 6542 3444567777774 99999999999999999998888543223568999999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHH--hh
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFH--EV 152 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~--~~ 152 (347)
+|+++ ++++|++||||++. |+|+||+++|++. ++++ |++ ++++ +|+++..+.|||.+++ ..
T Consensus 71 ~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~---l~~~~aa~~~~~~~ta~~~l~~~~~ 143 (328)
T 1xa0_A 71 VVVSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKG---LTLKEAMAIGTAGFTAALSIHRLEE 143 (328)
T ss_dssp EEEEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTT---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHH-eEEC-CCC---CCHHHhhhhhhhHHHHHHHHHHHhh
Confidence 88885 57889999999964 8999999999998 9999 999 8886 7888888999998875 34
Q ss_pred cCCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 153 CSPKSGE-YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 153 ~~~~~~~-~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
.++++|+ +|||+|++|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++. + .+.+++++++++|++
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLDKQRWAAA 220 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEEEE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhcCCcccEE
Confidence 6789997 9999999999999999999999999999999999999999 9999999998764 3 444566655589999
Q ss_pred EeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCc
Q 019012 232 FDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 232 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~ 310 (347)
|||+|++.++.++++++++|+++.+|...+. ....+...++.+++++.|+..... .....+.++++.+++++|
T Consensus 221 id~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g- 294 (328)
T 1xa0_A 221 VDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD- 294 (328)
T ss_dssp EECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-
T ss_pred EECCcHHHHHHHHHhhccCCEEEEEeecCCC-----CCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-
Confidence 9999998999999999999999999976432 112334567789999998753222 222345678888888888
Q ss_pred eeeeeecccccccHHHHHHHhhcCcccceEEEEec
Q 019012 311 IVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVA 345 (347)
Q Consensus 311 i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~ 345 (347)
+++. ..+++|+++++|++.+.+++..||+||+++
T Consensus 295 l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 295 LERI-AQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp HHHH-EEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred Ccee-eeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 7764 578899999999999998888899999863
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-49 Score=359.50 Aligned_cols=301 Identities=22% Similarity=0.249 Sum_probs=239.3
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC-CCCCCCCCCCceecc
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS-SYIPPFVPGQPVEGF 83 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~ 83 (347)
.+|||++++++ |.+ +.+ .++|.|+|. ++||||||.+++||++|++.+.|.+.. ...+|.++|||++|
T Consensus 2 ~~mka~~~~~~--g~~----l~~--~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G- 69 (344)
T 2h6e_A 2 VKSKAALLKKF--SEP----LSI--EDVNIPEPQ---GEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAG- 69 (344)
T ss_dssp EEEEBCEECSC--CC-----------EEEECCCC---TTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEE-
T ss_pred ceeEEEEEecC--CCC----CeE--EEeeCCCCC---CCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceE-
Confidence 46999999997 532 445 457777774 999999999999999999999886531 23568999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEee-ccccceecCCCCCCChh
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIR-KTEQLRKIQPDHHIPLS 132 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~-~~~~~~~i~p~~~~~~~ 132 (347)
+|+++|++ ++|++||||+++ |+|+||+++| ++. ++++ ++ ++
T Consensus 70 -~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~---l~ 141 (344)
T 2h6e_A 70 -TIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW-LVKL--NS---LS 141 (344)
T ss_dssp -EEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGG-EEEE--SS---SC
T ss_pred -EEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCccc-EEEe--CC---CC
Confidence 99999999 999999999853 7999999999 998 9998 56 67
Q ss_pred hh-hhhcCChhhhHHHHHHhh----cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHcCCC
Q 019012 133 YH-IGLLGMPGFTAYAGFHEV----CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFD 205 (347)
Q Consensus 133 ~~-~a~l~~~~~ta~~al~~~----~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~g~~ 205 (347)
++ +|+++.++.|||+++... +++ +|++|||+|+ |++|++++|+|+.+ |++|++++++++++++++ ++|++
T Consensus 142 ~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~ 218 (344)
T 2h6e_A 142 PVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGAD 218 (344)
T ss_dssp HHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCS
T ss_pred HHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCC
Confidence 75 788999999999999664 288 9999999998 99999999999999 999999999999999999 99999
Q ss_pred eeeecCC-HHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceE
Q 019012 206 EAFNYND-ETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRIT 282 (347)
Q Consensus 206 ~vi~~~~-~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
+++|+++ . ++ +++++.+ ++|++||++|+. .++.++++++++|+++.+|..... ...+...++.++++
T Consensus 219 ~vi~~~~~~-~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~ 288 (344)
T 2h6e_A 219 YVSEMKDAE-SL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR------VSLEAFDTAVWNKK 288 (344)
T ss_dssp EEECHHHHH-HH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHHHTTCE
T ss_pred EEeccccch-HH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC------cccCHHHHhhCCcE
Confidence 9998865 3 43 4455556 899999999986 899999999999999999975431 23455677889999
Q ss_pred eeccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 283 MKGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+.|+.... .+.++++++++++|++++.+ .+++|+++++|++.+.+++..||+||++
T Consensus 289 i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 289 LLGSNYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp EEECCSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred EEEEecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 99987654 67799999999999999988 8899999999999999888788999863
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=367.79 Aligned_cols=316 Identities=21% Similarity=0.290 Sum_probs=257.8
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
||.+|||++++++ |.+. .+.+ .++|.|+|. ++||||||.+++||++|++.+.|.+.....+|.++|||++|
T Consensus 1 m~~~mka~~~~~~--g~~~--~l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G 71 (330)
T 1tt7_A 1 MSTLFQALQAEKN--ADDV--SVHV--KTISTEDLP---KDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG 71 (330)
T ss_dssp -CCEEEEEEECCG--GGSC--CCEE--EEEESSSSC---SSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEE
T ss_pred CCCcceEEEEecC--CCCc--ceeE--eecCCCCCC---CCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEE
Confidence 4567999999998 6442 3455 457777774 99999999999999999999888543233568999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHH--
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFH-- 150 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~-- 150 (347)
+|+++ ++++|++||||++. |+|+||++++++. ++++ |++ ++++ +|+++..+.|||.+++
T Consensus 72 --~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---l~~~~aa~l~~~~~ta~~~l~~~ 142 (330)
T 1tt7_A 72 --TVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQN---LSLKEAMVYGTAGFTAALSVHRL 142 (330)
T ss_dssp --EEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTT---CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --EEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHH-eEEC-CCC---CCHHHHhhccchHHHHHHHHHHH
Confidence 88886 46889999999964 8999999999998 9999 999 8886 7888888999998875
Q ss_pred hhcCCCCCC-EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 151 EVCSPKSGE-YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 151 ~~~~~~~~~-~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
...++++|+ +|||+||+|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++. + .+.+++++++++|
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d 219 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALSKQQWQ 219 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhhcCCcc
Confidence 346789997 9999999999999999999999999999999999999999 9999999987532 1 2223444444899
Q ss_pred EEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHC
Q 019012 230 IYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 230 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 308 (347)
++|||+|++.+..++++++++|+++.+|..... ....+...++.+++++.|++.... .....+.++++.+++++
T Consensus 220 ~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (330)
T 1tt7_A 220 GAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKP 294 (330)
T ss_dssp EEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCC
T ss_pred EEEECCcHHHHHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhc
Confidence 999999998999999999999999999975431 122344567889999998753222 22234567888888889
Q ss_pred CceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 309 GKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 309 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
|.+++.+..+|+|+++++|++.+.+++..||+||++
T Consensus 295 g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 295 DQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp SCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred CCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 999988888999999999999999888889999864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=355.82 Aligned_cols=305 Identities=21% Similarity=0.267 Sum_probs=263.5
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC-------CCCCCCCCCCc
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS-------SYIPPFVPGQP 79 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~-------~~~~p~i~G~e 79 (347)
|||++++++ |.+ +.+ .++|.|+|. ++||||||.+++||++|++.+.|.+.. ...+|.++|||
T Consensus 1 Mka~~~~~~--g~~----l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e 69 (347)
T 1jvb_A 1 MRAVRLVEI--GKP----LSL--QEIGVPKPK---GPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69 (347)
T ss_dssp CEEEEECST--TSC----CEE--EECCCCCCC---TTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCE
T ss_pred CeEEEEecC--CCC----eEE--EEeeCCCCC---CCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCcccccc
Confidence 689999987 543 455 457888774 999999999999999999988875421 23568999999
Q ss_pred eecceEEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeec-cccceecCCCCC
Q 019012 80 VEGFGVSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRK-TEQLRKIQPDHH 128 (347)
Q Consensus 80 ~~G~g~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~-~~~~~~i~p~~~ 128 (347)
++| +|+++|+++++|++||||+++ |+|+||+++|+ +. ++++ ++
T Consensus 70 ~~G--~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~- 143 (347)
T 1jvb_A 70 IAG--KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY-MYKL--RR- 143 (347)
T ss_dssp EEE--EEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGG-EEEC--SS-
T ss_pred ceE--EEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccc-eEEe--CC-
Confidence 888 999999999999999999753 79999999999 88 9988 56
Q ss_pred CChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCe
Q 019012 129 IPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDE 206 (347)
Q Consensus 129 ~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~ 206 (347)
++++ +|+++.++.|||+++. .+++++|++|||+|++|++|++++|+++.. |++|+++++++++.+.++ ++|++.
T Consensus 144 --~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~ 219 (347)
T 1jvb_A 144 --LNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADY 219 (347)
T ss_dssp --SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSE
T ss_pred --CCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCE
Confidence 6775 7889999999999995 589999999999999779999999999999 999999999999999998 999999
Q ss_pred eeecCCHHHHHHHHHHHCC-CCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEee
Q 019012 207 AFNYNDETDLVAALKRCFP-QGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284 (347)
Q Consensus 207 vi~~~~~~~~~~~i~~~~~-g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
++|+++. ++.+.+++.+. +++|++||++|+. .++.++++++++|+++.+|..... . ..+...++.+++++.
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~----~--~~~~~~~~~~~~~i~ 292 (347)
T 1jvb_A 220 VINASMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD----L--HYHAPLITLSEIQFV 292 (347)
T ss_dssp EEETTTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC----C--CCCHHHHHHHTCEEE
T ss_pred EecCCCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC----C--CCCHHHHHhCceEEE
Confidence 9998876 77778888886 5899999999986 889999999999999999975421 1 344556788999999
Q ss_pred ccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
|+.... .+.++++++++++|.+++.++.+++|+++++|++.+.+++..||+||++
T Consensus 293 g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 293 GSLVGN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp ECCSCC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred EEeccC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 987654 6779999999999999998888899999999999999988889999874
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-49 Score=360.12 Aligned_cols=322 Identities=22% Similarity=0.272 Sum_probs=253.6
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC--------------CC
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT--------------SS 69 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~--------------~~ 69 (347)
+.+|||++++++ |.+. .+.+. .++|.|.+.+ ++||||||.|++||++|++.+.|.+. ..
T Consensus 19 ~~~mka~~~~~~--g~~~--~l~~~-~~~p~P~~~~--~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~ 91 (375)
T 2vn8_A 19 YFQSMAWVIDKY--GKNE--VLRFT-QNMMMPIIHY--PNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKG 91 (375)
T ss_dssp CCCEEEEEBSSC--CSGG--GCEEE-EEECCCCCCS--TTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTT
T ss_pred CccceeEEeccC--CCcc--ceEEe-ccccCCCCCC--CCEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccc
Confidence 457999999998 7663 44551 3467776424 99999999999999999998887431 01
Q ss_pred CCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChh
Q 019012 70 YIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPG 142 (347)
Q Consensus 70 ~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~ 142 (347)
..+|.++|||++| +|+++|++|++|++||+|++. |+|+||++++++. ++++ |++ ++++ +|+++.++
T Consensus 92 ~~~P~v~G~E~~G--~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~---ls~~~Aa~l~~~~ 164 (375)
T 2vn8_A 92 EEFPLTLGRDVSG--VVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNE-VSHK-PKS---LTHTQAASLPYVA 164 (375)
T ss_dssp TTCSBCCCCEEEE--EEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGG-EEEC-CTT---SCHHHHTTSHHHH
T ss_pred ccCCcccceeeeE--EEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHH-eeeC-CCC---CCHHHHhhhHHHH
Confidence 2368999999888 999999999999999999984 8999999999998 9999 999 8886 77888889
Q ss_pred hhHHHHHHhhcC----CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHH
Q 019012 143 FTAYAGFHEVCS----PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVA 218 (347)
Q Consensus 143 ~ta~~al~~~~~----~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 218 (347)
+|||+++.+.++ +++|++|||+||+|++|++++|+|+..|++|++++ ++++.++++ ++|++.++|+++. ++.+
T Consensus 165 ~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~ 241 (375)
T 2vn8_A 165 LTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEE 241 (375)
T ss_dssp HHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHH
T ss_pred HHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHH
Confidence 999999977788 99999999999999999999999999999999998 678889998 9999999999876 7777
Q ss_pred HHHHHCCCCccEEEeCCChh--hHHHHHHhhhcCCeEEEEcccccccCCCCCCccc----hHHHhhcce-Ee-eccccc-
Q 019012 219 ALKRCFPQGIDIYFDNVGGE--MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN----LFTLVTKRI-TM-KGFLQS- 289 (347)
Q Consensus 219 ~i~~~~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~-~~-~~~~~~- 289 (347)
.+++. +++|++|||+|+. .+..++++++++|+++.+|............... ...++.+++ ++ .+....
T Consensus 242 ~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 319 (375)
T 2vn8_A 242 QLKSL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRW 319 (375)
T ss_dssp HHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhhc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEE
Confidence 77653 3799999999986 4588899999999999998643210000000000 012223222 11 121110
Q ss_pred cccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEe
Q 019012 290 DYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
.+.....+.++++++++++|++++.+..+++|+++++|++.+.+++..||+||++
T Consensus 320 ~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 320 AFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374 (375)
T ss_dssp CCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred EEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 0111125678999999999999998888999999999999999988788999975
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-48 Score=353.12 Aligned_cols=305 Identities=17% Similarity=0.163 Sum_probs=256.8
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceE
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~ 85 (347)
+||++.+..+ +.+. .+.+ .++|.|+|. ++||||||.+++||++|++.+.|.+. ...+|.++|||++| +
T Consensus 14 ~mk~~~~~~~--~~~~--~l~~--~~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G--~ 81 (366)
T 1yqd_A 14 PVKAFGWAAR--DQSG--HLSP--FNFSRRATG---EEDVRFKVLYCGVCHSDLHSIKNDWG-FSMYPLVPGHEIVG--E 81 (366)
T ss_dssp SEEEEEEEEC--STTC--CEEE--EEEEECCCC---TTEEEEEEEEEEECHHHHHHHHTSSS-CCCSSBCCCCCEEE--E
T ss_pred CeeEEEEEEc--CCCC--CcEE--EEccCCCCC---CCeEEEEEEEEeechhhHHHHcCCCC-CCCCCEecccceEE--E
Confidence 4666666665 4443 4455 457777774 99999999999999999999888542 23568999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEE--------------------------------------ecCcceeEEeeccccceecCCCC
Q 019012 86 SKVVDSDNPNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLRKIQPDH 127 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~ 127 (347)
|+++|++|++|++||||++ .|+|+||+++|++. ++++ |++
T Consensus 82 V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~ 159 (366)
T 1yqd_A 82 VTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERY-IIRF-PDN 159 (366)
T ss_dssp EEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGG-CEEC-CTT
T ss_pred EEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhh-EEEC-CCC
Confidence 9999999999999999973 27899999999998 9999 999
Q ss_pred CCChhhh-hhhcCChhhhHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC
Q 019012 128 HIPLSYH-IGLLGMPGFTAYAGFHEVCSPK-SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD 205 (347)
Q Consensus 128 ~~~~~~~-~a~l~~~~~ta~~al~~~~~~~-~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~ 205 (347)
++++ +|+++.++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++++|++
T Consensus 160 ---ls~~~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~ 234 (366)
T 1yqd_A 160 ---MPLDGGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD 234 (366)
T ss_dssp ---SCTTTTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS
T ss_pred ---CCHHHhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc
Confidence 8886 78899999999999954 6788 9999999996 99999999999999999999999999988876589999
Q ss_pred eeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEee
Q 019012 206 EAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMK 284 (347)
Q Consensus 206 ~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
+++|+++. + .+++.++ ++|++||++|.. .++.++++++++|+++.+|..... ...+...++.+++++.
T Consensus 235 ~v~~~~~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~ 303 (366)
T 1yqd_A 235 SFLVSRDQ-E---QMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP------LELPAFSLIAGRKIVA 303 (366)
T ss_dssp EEEETTCH-H---HHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC------EEECHHHHHTTTCEEE
T ss_pred eEEeccCH-H---HHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC------CCcCHHHHHhCCcEEE
Confidence 99998864 3 4555553 799999999975 789999999999999999875431 2345567888999999
Q ss_pred ccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 285 GFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
|+.... .+.++++++++++|.+++.+ .+|+|+++++|++.+.+++..+|+||++++
T Consensus 304 g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~ 359 (366)
T 1yqd_A 304 GSGIGG-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGN 359 (366)
T ss_dssp ECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred EecCCC-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence 987654 56789999999999999876 578999999999999998888999998754
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=360.66 Aligned_cols=310 Identities=20% Similarity=0.228 Sum_probs=260.1
Q ss_pred ccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCC-----CcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 6 ENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDS-----GAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 6 ~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~-----~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
+|||++++++ + .+.+ .++|.|++.+ + +||||||.+++||++|++.+.|.+ ...+|.++|||+
T Consensus 2 ~MkA~~~~~~--~-----~l~~--~~~p~P~~~~--~~~~~~~eVlVkv~a~gic~~D~~~~~G~~--~~~~p~v~GhE~ 68 (398)
T 2dph_A 2 GNKSVVYHGT--R-----DLRV--ETVPYPKLEH--NNRKLEHAVILKVVSTNICGSDQHIYRGRF--IVPKGHVLGHEI 68 (398)
T ss_dssp CEEEEEEEET--T-----EEEE--EEECCCCSEE--TTEECTTCEEEEEEEEECCHHHHHHHTTSS--CCCTTCBCCCCE
T ss_pred ccEEEEEEcC--C-----CEEE--EEccCCCCCC--CcCCCCCeEEEEEEEEeecHHHHHHhcCCC--CCCCCcccCCce
Confidence 5899999986 3 3444 4577776523 6 999999999999999999998854 245689999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEE-----------------------------------------ecCcceeEEeecc--
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAG-----------------------------------------LTGWEEYSLIRKT-- 117 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~-----------------------------------------~g~~~~~~~v~~~-- 117 (347)
+| +|+++|++|++|++||||++ .|+|+||++++++
T Consensus 69 ~G--~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~ 146 (398)
T 2dph_A 69 TG--EVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADY 146 (398)
T ss_dssp EE--EEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHH
T ss_pred EE--EEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccC
Confidence 88 99999999999999999985 2789999999986
Q ss_pred ccceecCCCCCCChhhh-----hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC
Q 019012 118 EQLRKIQPDHHIPLSYH-----IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 191 (347)
Q Consensus 118 ~~~~~i~p~~~~~~~~~-----~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~ 191 (347)
. ++++ |++ ++++ +|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus 147 ~-~~~i-P~~---~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~ 219 (398)
T 2dph_A 147 M-LLKF-GDK---EQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQN 219 (398)
T ss_dssp H-CEEC-SSH---HHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred e-EEEC-CCC---CChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 6 9999 999 8874 588899999999999 6789999999999996 9999999999999999 99999999
Q ss_pred hHhHHHHHHHcCCCeeeecCCHHHH-HHHHHHHCCC-CccEEEeCCChh---------------hHHHHHHhhhcCCeEE
Q 019012 192 SQKVDLLKNKLGFDEAFNYNDETDL-VAALKRCFPQ-GIDIYFDNVGGE---------------MLDAALLNMRDHGRIA 254 (347)
Q Consensus 192 ~~~~~~~~~~~g~~~vi~~~~~~~~-~~~i~~~~~g-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v 254 (347)
++++++++ ++|++ ++|+++. ++ .+.+++.+++ ++|++||++|+. .++.++++++++|+++
T Consensus 220 ~~~~~~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv 296 (398)
T 2dph_A 220 PERLKLLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG 296 (398)
T ss_dssp HHHHHHHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEE
Confidence 99999999 99995 8998875 65 8889988887 899999999974 5899999999999999
Q ss_pred EEccccc-ccCC------CCCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCcee--e--eeeccccccc
Q 019012 255 VCGMVSL-HSYH------DPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV--Y--VEDMNEGLEN 323 (347)
Q Consensus 255 ~~g~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~--~~~~~~~l~~ 323 (347)
.+|.... .+.. ......+...++.+++++.++.... .+.++++++++++|+++ + .+..+++|++
T Consensus 297 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~ 371 (398)
T 2dph_A 297 IPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQ 371 (398)
T ss_dssp CCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTT
T ss_pred EeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHH
Confidence 9997521 1000 0112344567788999998865433 45588999999999998 6 4677889999
Q ss_pred HHHHHHHhhcCcccceEEEEecC
Q 019012 324 APAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 324 ~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+++|++.+.+++. +|+||+++.
T Consensus 372 ~~~A~~~~~~~~~-gKvvv~~~~ 393 (398)
T 2dph_A 372 APDGYAKFDKGSP-AKFVIDPHG 393 (398)
T ss_dssp HHHHHHHHHTTCS-CEEEECTTS
T ss_pred HHHHHHHHhcCCc-eEEEEecCc
Confidence 9999999998887 999998753
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-48 Score=352.82 Aligned_cols=305 Identities=20% Similarity=0.261 Sum_probs=253.5
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
++|+++.+.++ + +.+.+ .++|.|+|. ++||||||.+++||++|++.+.|.+. ...+|.++|||++|
T Consensus 21 ~~~~a~~~~~~--~----~~l~~--~~~p~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G-- 86 (369)
T 1uuf_A 21 LKIKAVGAYSA--K----QPLEP--MDITRREPG---PNDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVG-- 86 (369)
T ss_dssp --CEEEEBSST--T----SCCEE--EECCCCCCC---TTEEEEEEEEEECCHHHHHHHHCTTS-CCCSSBCCCCCEEE--
T ss_pred ceEEEEEEcCC--C----CCcEE--EEecCCCCC---CCeEEEEEEEEeecHHHHHHhcCCCC-CCCCCeecccCceE--
Confidence 35788877654 2 23455 457888774 99999999999999999999888542 23468999999888
Q ss_pred EEEEeccCCCCCCCCCEEEE---------------------------------------ecCcceeEEeeccccceecCC
Q 019012 85 VSKVVDSDNPNFKPGDLVAG---------------------------------------LTGWEEYSLIRKTEQLRKIQP 125 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~~~~~~~i~p 125 (347)
+|+++|++|++|++||||++ .|+|+||+++|++. ++++ |
T Consensus 87 ~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~-~~~~-P 164 (369)
T 1uuf_A 87 RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-R 164 (369)
T ss_dssp EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-C
T ss_pred EEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchh-EEEC-C
Confidence 99999999999999999984 17899999999998 9999 8
Q ss_pred CCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 126 DHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 126 ~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
++. ++++ +|+++.+++|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++ ++|+
T Consensus 165 ~~~--ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa 239 (369)
T 1uuf_A 165 HPQ--EQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGA 239 (369)
T ss_dssp SCG--GGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTC
T ss_pred CCC--CCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC
Confidence 761 4665 78899999999999965 68999999999997 99999999999999999999999999999999 9999
Q ss_pred CeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEe
Q 019012 205 DEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283 (347)
Q Consensus 205 ~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
++++|+++. ++.+ ++. +++|++||++|+. .++.++++++++|+++.+|..... ....+...++.+++++
T Consensus 240 ~~vi~~~~~-~~~~---~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i 309 (369)
T 1uuf_A 240 DEVVNSRNA-DEMA---AHL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAI 309 (369)
T ss_dssp SEEEETTCH-HHHH---TTT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEE
T ss_pred cEEeccccH-HHHH---Hhh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCC-----ccccCHHHHHhCCcEE
Confidence 999999875 5433 333 4799999999975 789999999999999999975431 1134456778899999
Q ss_pred eccccccccchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 284 KGFLQSDYLHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
.|+.... .+.++++++++++|++++.+. .++|+++++|++.+.+++..+|+||++++
T Consensus 310 ~g~~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 310 AGSMIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp EECCSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred EEeecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 9987654 567899999999999998765 58999999999999988878999998764
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=355.49 Aligned_cols=312 Identities=21% Similarity=0.206 Sum_probs=257.4
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCc------EEEEEEEeecChhcccccccCCCCCCCCCCCCCC
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGA------FLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQ 78 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~------vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~ 78 (347)
++|||++++++ + .+.+ .++|.|+|.. ++| |||||.+++||++|++.++|.+ ...+|.++||
T Consensus 1 ~~Mka~~~~~~--~-----~l~~--~~~p~P~~~~--~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~--~~~~p~v~Gh 67 (398)
T 1kol_A 1 SGNRGVVYLGS--G-----KVEV--QKIDYPKMQD--PRGKKIEHGVILKVVSTNICGSDQHMVRGRT--TAQVGLVLGH 67 (398)
T ss_dssp -CEEEEEEEET--T-----EEEE--EEECCCCSBC--TTSCBCSSCEEEEEEEEECCHHHHHHHTTCS--CCCTTCBCCC
T ss_pred CccEEEEEecC--C-----ceEE--EEecCCCCCC--CCcccccceEEEEEEEEeechhhHHHHcCCC--CCCCCcccCc
Confidence 36899999876 3 3445 4577776643 667 9999999999999999998854 2346899999
Q ss_pred ceecceEEEEeccCCCCCCCCCEEEE----------------------------------------ecCcceeEEeecc-
Q 019012 79 PVEGFGVSKVVDSDNPNFKPGDLVAG----------------------------------------LTGWEEYSLIRKT- 117 (347)
Q Consensus 79 e~~G~g~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~- 117 (347)
|++| +|+++|++|++|++||||++ .|+|+||+++|++
T Consensus 68 E~~G--~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~ 145 (398)
T 1kol_A 68 EITG--EVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYAD 145 (398)
T ss_dssp CEEE--EEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHH
T ss_pred ccEE--EEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchh
Confidence 9888 99999999999999999983 2789999999986
Q ss_pred -ccceecCCCCCCChhhh-----hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEC
Q 019012 118 -EQLRKIQPDHHIPLSYH-----IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 190 (347)
Q Consensus 118 -~~~~~i~p~~~~~~~~~-----~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~ 190 (347)
+ ++++ |++ ++++ +|+++.+++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus 146 ~~-~~~~-P~~---~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~ 218 (398)
T 1kol_A 146 FN-LLKL-PDR---DKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDL 218 (398)
T ss_dssp HH-CEEC-SCH---HHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES
T ss_pred Ce-EEEC-CCC---cchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcC
Confidence 6 9999 998 8774 4789999999999995 689999999999995 9999999999999999 8999999
Q ss_pred ChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChh----------------hHHHHHHhhhcCCeE
Q 019012 191 SSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE----------------MLDAALLNMRDHGRI 253 (347)
Q Consensus 191 ~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~----------------~~~~~~~~l~~~G~~ 253 (347)
+++|+++++ ++|++ ++|+++.+++.+.+++.+++ ++|++||++|++ .++.++++++++|++
T Consensus 219 ~~~~~~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~i 296 (398)
T 1kol_A 219 NPARLAHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKI 296 (398)
T ss_dssp CHHHHHHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEE
T ss_pred CHHHHHHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEE
Confidence 999999999 99997 88887641378889998887 899999999975 689999999999999
Q ss_pred EEEcccc-cccCCC------CCCccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCcee---eeeeccccccc
Q 019012 254 AVCGMVS-LHSYHD------PQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKIV---YVEDMNEGLEN 323 (347)
Q Consensus 254 v~~g~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~---~~~~~~~~l~~ 323 (347)
+.+|... ...... .........++.+++++.+..... .+.++++++++.+|+++ +.+..+|+|++
T Consensus 297 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~ 371 (398)
T 1kol_A 297 GIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV-----MKYNRALMQAIMWDRINIAEVVGVQVISLDD 371 (398)
T ss_dssp EECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCH-----HHHHHHHHHHHHTTSCCHHHHHTEEEECGGG
T ss_pred EEeccccCCcccccccccccccccccHHHHhhcccEEEecccCh-----HHHHHHHHHHHHcCCCCCccceeEEEEcHHH
Confidence 9999752 111000 012344556778888888764322 56788999999999998 45677889999
Q ss_pred HHHHHHHhhcCcccceEEEEecC
Q 019012 324 APAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 324 ~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+++|++.+.+++. +|+||+++.
T Consensus 372 ~~~A~~~~~~~~~-gKvvi~~~~ 393 (398)
T 1kol_A 372 APRGYGEFDAGVP-KKFVIDPHK 393 (398)
T ss_dssp HHHHHHHHHHTCS-CEEEECTTC
T ss_pred HHHHHHHHhCCCc-eEEEEEeCC
Confidence 9999999998887 999998753
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=343.74 Aligned_cols=321 Identities=39% Similarity=0.661 Sum_probs=259.6
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
++||++++.++..|.+.+..+.+. +.|.|++ + ++||||||.+++||+.|... . ....+|.++|||++|
T Consensus 6 ~~mka~~~~~~~~g~~~~~~l~~~--e~~~P~~-~--~~eVlVkv~a~gi~~~~~~~-~----~~~~~p~~~g~e~~G-- 73 (333)
T 1v3u_A 6 VKAKSWTLKKHFQGKPTQSDFELK--TVELPPL-K--NGEVLLEALFLSVDPYMRIA-S----KRLKEGAVMMGQQVA-- 73 (333)
T ss_dssp CEEEEEEECC-----CCGGGEEEE--EEECCCC-C--TTCEEEEEEEEECCTHHHHH-T----TTCCTTSBCCCCEEE--
T ss_pred ccccEEEEeecCCCCCCccceEEE--eCCCCCC-C--CCEEEEEEEEeccCHHHccc-c----CcCCCCcccccceEE--
Confidence 458999999853344434456664 4777767 4 99999999999999998722 1 124568899999887
Q ss_pred EEEEeccCCCCCCCCCEEEEecCcceeEEeeccccceecCCCCCCC--hhhh--hhhcCChhhhHHHHHHhhcCCCCCCE
Q 019012 85 VSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIP--LSYH--IGLLGMPGFTAYAGFHEVCSPKSGEY 160 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~--~~~~--~a~l~~~~~ta~~al~~~~~~~~~~~ 160 (347)
+|++. ++++|++||||++.|+|+||++++++. ++++ |++ ++ ++++ +|+++.+++|||+++.+.+++++|++
T Consensus 74 ~Vv~~--~v~~~~vGdrV~~~g~~aey~~v~~~~-~~~i-P~~-~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~ 148 (333)
T 1v3u_A 74 RVVES--KNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTE-WPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGET 148 (333)
T ss_dssp EEEEE--SCTTSCTTCEEEECCCSBSEEEESSTT-EEEC-C---CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCE
T ss_pred EEEec--CCCCCCCCCEEEecCceEEEEEechHH-eEEc-Ccc-cccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCE
Confidence 77664 678999999999999999999999998 9999 985 11 4443 58999999999999988889999999
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCC-HHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND-ETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++ . ++.+.+++.+.+++|++||++|+..
T Consensus 149 vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~ 226 (333)
T 1v3u_A 149 VLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGGEF 226 (333)
T ss_dssp EEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCHHH
T ss_pred EEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCChHH
Confidence 999999999999999999999999999999999999997 999998999876 5 7788888887678999999999988
Q ss_pred HHHHHHhhhcCCeEEEEcccccccCCC-CCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeeec
Q 019012 240 LDAALLNMRDHGRIAVCGMVSLHSYHD-PQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVEDM 317 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~ 317 (347)
++.++++++++|+++.+|......... .....+...++.+++++.|+....+ +....+.++++++++++|++++.+..
T Consensus 227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~ 306 (333)
T 1v3u_A 227 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHV 306 (333)
T ss_dssp HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcccc
Confidence 999999999999999999764321000 0011245678889999999876543 24456789999999999999998887
Q ss_pred ccccccHHHHHHHhhcCcccceEEEEe
Q 019012 318 NEGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 318 ~~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
+++|+++++|++.+.+++..||+||++
T Consensus 307 ~~~l~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 307 TKGFENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp EECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 889999999999999988889999864
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=342.51 Aligned_cols=294 Identities=24% Similarity=0.331 Sum_probs=248.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |.+. .++ +.|.|++. ++||+|||.+++||++|++.+.|.+.....+|.++|||++| +|
T Consensus 1 Mka~~~~~~--g~~~----~l~--~~~~p~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G--~V 67 (302)
T 1iz0_A 1 MKAWVLKRL--GGPL----ELV--DLPEPEAE---EGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVG--VV 67 (302)
T ss_dssp CEEEEECST--TSCE----EEE--ECCCCCCC---TTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEE--EE
T ss_pred CeEEEEcCC--CCch----heE--ECCCCCCC---CCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEE--EE
Confidence 689999988 7663 454 68888774 99999999999999999999988654333569999999888 77
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+ ||||+++ |+|+||+++|++. ++++ |++ ++++ +|+++.+++|||+++.+.+ +++|++||
T Consensus 68 ~-----------GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vl 130 (302)
T 1iz0_A 68 E-----------GRRYAALVPQGGLAERVAVPKGA-LLPL-PEG---LSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVL 130 (302)
T ss_dssp T-----------TEEEEEECSSCCSBSEEEEEGGG-CEEC-CTT---CCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEE
T ss_pred E-----------CcEEEEecCCcceeeEEEEcHHH-cEeC-CCC---CCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEE
Confidence 4 9999998 9999999999998 9999 999 8886 7899999999999997677 99999999
Q ss_pred EEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCC-HHHHHHHHHHHCCCCccEEEeCCChhhHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND-ETDLVAALKRCFPQGIDIYFDNVGGEMLD 241 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~-~~~~~~~i~~~~~g~~d~vid~~g~~~~~ 241 (347)
|+|++|++|++++|+|+..|++|+++++++++++.++ ++|+++++|+++ . ++.+.+ +++|++|| +|++.++
T Consensus 131 V~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g~~~~~ 202 (302)
T 1iz0_A 131 VQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VRGKEVE 202 (302)
T ss_dssp ESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CSCTTHH
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CCHHHHH
Confidence 9999999999999999999999999999999999998 999999999876 5 655544 47999999 9988999
Q ss_pred HHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccccchhHHHHHHHHH---HHHCCceeeeeecc
Q 019012 242 AALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS---NYKQGKIVYVEDMN 318 (347)
Q Consensus 242 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~g~i~~~~~~~ 318 (347)
.++++++++|+++.+|..... ....+...++.+++++.|+....+ ....+.++++++ ++++|++++.+..+
T Consensus 203 ~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~ 276 (302)
T 1iz0_A 203 ESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVGPV 276 (302)
T ss_dssp HHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEEEE
T ss_pred HHHHhhccCCEEEEEeCCCCC-----CCCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccceE
Confidence 999999999999999976442 112344567889999998875432 223677889999 99999999998889
Q ss_pred cccccHHHHHHHhhcCcccceEEEEe
Q 019012 319 EGLENAPAAFVGLFSGKNVGKQVVRV 344 (347)
Q Consensus 319 ~~l~~~~~a~~~~~~~~~~gk~vv~~ 344 (347)
|+++++++|++.+.+++..||+|+++
T Consensus 277 ~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 277 FPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp EEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred EcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999999999888788999864
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-48 Score=355.90 Aligned_cols=298 Identities=15% Similarity=0.149 Sum_probs=255.0
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCC---CCCCCCceecc
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIP---PFVPGQPVEGF 83 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~---p~i~G~e~~G~ 83 (347)
|||++++++ +.+ +.+ .++|.|+|. ++||||||.|++||++|++.+.|.+.. ..+ |.++||| +.
T Consensus 1 MkA~~~~~~--~~~----l~~--~~~p~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E--~~ 66 (357)
T 2b5w_A 1 MKAIAVKRG--EDR----PVV--IEKPRPEPE---SGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHE--AV 66 (357)
T ss_dssp CEEEEEETT--CSS----CEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSE--EE
T ss_pred CeEEEEeCC--CCc----eEE--EECCCCCCC---cCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCce--eE
Confidence 789999997 542 455 457888774 999999999999999999999885421 345 8999999 55
Q ss_pred eEEEEeccCCCCCCCCCEEEEe-----------------------------------cCcceeEEeeccccceecCCCCC
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL-----------------------------------TGWEEYSLIRKTEQLRKIQPDHH 128 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~i~p~~~ 128 (347)
| |+++|++ ++|++||||++. |+|+||++++++. ++++ |++
T Consensus 67 G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~- 141 (357)
T 2b5w_A 67 G-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKY-LVRI-PRS- 141 (357)
T ss_dssp E-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGG-EEEC-CGG-
T ss_pred E-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHH-eEEC-CCC-
Confidence 6 8999999 999999999863 7899999999998 9999 999
Q ss_pred CChhhhhhhcCChhhhHHHHHHhhcCCCCC------CEEEEEcCCchHHHHH-HHHH-HHCCCE-EEEEECChH---hHH
Q 019012 129 IPLSYHIGLLGMPGFTAYAGFHEVCSPKSG------EYVFVSAASGAVGQLV-GQLA-KLHGCY-VVGSAGSSQ---KVD 196 (347)
Q Consensus 129 ~~~~~~~a~l~~~~~ta~~al~~~~~~~~~------~~vLI~Ga~g~~G~~a-i~la-~~~G~~-V~~~~~~~~---~~~ 196 (347)
++ ++|+++.+++|||+++ +.+++++| ++|||+|+ |++|+++ +|+| +.+|++ |++++++++ +++
T Consensus 142 --~~-~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~ 216 (357)
T 2b5w_A 142 --QA-ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID 216 (357)
T ss_dssp --GS-TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred --cc-hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence 88 8788999999999999 66889999 99999998 9999999 9999 999996 999999998 999
Q ss_pred HHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHH
Q 019012 197 LLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFT 275 (347)
Q Consensus 197 ~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 275 (347)
+++ ++|++++ |+++. ++.+ +++. ++++|++||++|+. .++.++++++++|+++.+|..... ....+...
T Consensus 217 ~~~-~lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~ 286 (357)
T 2b5w_A 217 IIE-ELDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----AFEVDAGA 286 (357)
T ss_dssp HHH-HTTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----CCCCCHHH
T ss_pred HHH-HcCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----CceecHHH
Confidence 999 9999988 98875 7777 7777 55899999999985 889999999999999999976521 12344455
Q ss_pred H----hhcceEeeccccccccchhHHHHHHHHHHHHCC--c-eeeeeecccccccHHHHHHHhhcCcccceEEEEecC
Q 019012 276 L----VTKRITMKGFLQSDYLHLYPRFLDYVISNYKQG--K-IVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 276 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~-i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
+ +.+++++.|+.... .+.++++++++++| + +++.+..+++|+++++|++.+ +..+|+||++++
T Consensus 287 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~ 356 (357)
T 2b5w_A 287 FHREMVLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST 356 (357)
T ss_dssp HHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred HhHHHHhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence 5 78999999987654 67899999999999 8 688888889999999999988 346899999875
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=361.31 Aligned_cols=316 Identities=16% Similarity=0.165 Sum_probs=261.1
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC-------------
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT------------- 67 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~------------- 67 (347)
|....+|||++... +.. .++..+.|.|+|. ++||||||.+++||++|++.+.|.+.
T Consensus 2 m~~~~~mka~v~~~---~~~-----~l~~~~~~~P~~~---~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p 70 (379)
T 3iup_A 2 MHSALQLRSRIKSS---GEL-----ELSLDSIDTPHPG---PDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERP 70 (379)
T ss_dssp -CEEEEEEEEECTT---SEE-----EEEEEEEECCCCC---TTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSE
T ss_pred CCchhhHHHHHhcC---CCC-----ceEEEeccCCCCC---CCEEEEEEEEEecCHHHHHHhcCCccccccccccccccc
Confidence 56667899988765 322 3555667888774 99999999999999999998887521
Q ss_pred ---------------CCCCCCCCCCCceecceEEEEeccCC-CCCCCCCEEEEe--cCcceeEEeeccccceecCCCCCC
Q 019012 68 ---------------SSYIPPFVPGQPVEGFGVSKVVDSDN-PNFKPGDLVAGL--TGWEEYSLIRKTEQLRKIQPDHHI 129 (347)
Q Consensus 68 ---------------~~~~~p~i~G~e~~G~g~v~~vg~~v-~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~ 129 (347)
....+|.++|||++| +|+++|++| ++|++||+|+++ |+|+||+++|++. ++++ |++
T Consensus 71 ~~~~~~p~~~~~~~~~~~~~p~i~G~e~~G--~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~i-P~~-- 144 (379)
T 3iup_A 71 IVTARVPEGAMRSMAGRLDASMPVGNEGAG--VVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQ-CLVL-PEG-- 144 (379)
T ss_dssp EEEEECCHHHHHHHGGGTTEEEECCSCEEE--EEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGG-EEEC-CTT--
T ss_pred cccccCccccccccccccCCCccceeeeEE--EEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHH-eEEC-CCC--
Confidence 023458999999888 999999999 899999999998 9999999999998 9999 999
Q ss_pred Chhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEc-CCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee
Q 019012 130 PLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSA-ASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA 207 (347)
Q Consensus 130 ~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~G-a~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v 207 (347)
++++ +|+++..++|||+++.. .. ++|++|||+| |+|++|++++|+|+..|++|+++++++++.++++ ++|++++
T Consensus 145 -~~~~~aa~l~~~~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~ 220 (379)
T 3iup_A 145 -ATPADGASSFVNPLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHV 220 (379)
T ss_dssp -CCHHHHTTSSHHHHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCE
T ss_pred -CCHHHHHhhhhhHHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEE
Confidence 8886 78899999999988754 44 8999999996 7899999999999999999999999999999999 9999999
Q ss_pred eecCCHHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhh-----cC-----------CeEEEEcccccccCCCCCC
Q 019012 208 FNYNDETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMR-----DH-----------GRIAVCGMVSLHSYHDPQG 269 (347)
Q Consensus 208 i~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~ 269 (347)
+|+++. ++.+.+++.+++ ++|++|||+|+. .++.++++++ ++ |+++.+|.....
T Consensus 221 ~~~~~~-~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~------- 292 (379)
T 3iup_A 221 CNAASP-TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS------- 292 (379)
T ss_dssp EETTST-THHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------
T ss_pred EeCCCh-HHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------
Confidence 999987 899999999987 999999999974 6688888885 44 555555543321
Q ss_pred ccchHHHhhcceEeeccccccc-----cchhHHHHHHHHHHHHCCceeeeeecccccccH--HHHHHHhhcCcccceEEE
Q 019012 270 IHNLFTLVTKRITMKGFLQSDY-----LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENA--PAAFVGLFSGKNVGKQVV 342 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~--~~a~~~~~~~~~~gk~vv 342 (347)
......++.+++++.|+....+ ++...+.++++.+++.+ .+++.+..+++|+++ ++|++.+.+++..||+||
T Consensus 293 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv 371 (379)
T 3iup_A 293 PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLI 371 (379)
T ss_dssp EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEE
T ss_pred ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEE
Confidence 1222345667899998876543 33445667888888888 588888899999999 999999999988999999
Q ss_pred EecC
Q 019012 343 RVAC 346 (347)
Q Consensus 343 ~~~~ 346 (347)
+++.
T Consensus 372 ~~~~ 375 (379)
T 3iup_A 372 NPNK 375 (379)
T ss_dssp ETTT
T ss_pred eCCC
Confidence 9864
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=378.37 Aligned_cols=308 Identities=17% Similarity=0.196 Sum_probs=262.4
Q ss_pred EEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEEEe
Q 019012 10 VIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSKVV 89 (347)
Q Consensus 10 ~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~~v 89 (347)
+.+..+ |.++ .+.+.+.+.|.|.+ + ++||+|||.++|||++|++.+.|.+ ..|.++|||++| +|+++
T Consensus 213 l~~~~~--G~~~--~L~~~~~~~p~~~~-~--~~eVlV~V~a~gin~~D~~~~~G~~----~~~~~lG~E~aG--~V~~v 279 (795)
T 3slk_A 213 LEATRP--GSLD--GLALVDEPTATAPL-G--DGEVRIAMRAAGVNFRDALIALGMY----PGVASLGSEGAG--VVVET 279 (795)
T ss_dssp EEESST--TSST--TEEECCCHHHHSCC-C--SSEEEEEEEEEEECHHHHHHTTTCC----SSCCCSCCCEEE--EEEEE
T ss_pred EecCCC--CCcc--ceEEEeCCccCCCC-C--CCEEEEEEEEEccCHHHHHHHcCCC----CCCccccceeEE--EEEEe
Confidence 344444 7664 56665544445545 4 9999999999999999999988854 346789999888 99999
Q ss_pred ccCCCCCCCCCEEEEe--cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcC
Q 019012 90 DSDNPNFKPGDLVAGL--TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAA 166 (347)
Q Consensus 90 g~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga 166 (347)
|++|++|++||||+++ |+|++|++++++. ++++ |++ ++++ +|+++..++|||+++.+.+++++|++|||+||
T Consensus 280 G~~V~~~~vGDrV~~~~~G~~ae~~~v~~~~-~~~i-P~~---ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~ga 354 (795)
T 3slk_A 280 GPGVTGLAPGDRVMGMIPKAFGPLAVADHRM-VTRI-PAG---WSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSA 354 (795)
T ss_dssp CSSCCSSCTTCEEEECCSSCSSSEEEEETTS-EEEC-CTT---CCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEEST
T ss_pred CCCCCcCCCCCEEEEEecCCCcCEEEeehHH-EEEC-CCC---CCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecC
Confidence 9999999999999987 8999999999998 9999 999 8886 88999999999999988899999999999999
Q ss_pred CchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHH
Q 019012 167 SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALL 245 (347)
Q Consensus 167 ~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~ 245 (347)
+|++|++++|+|+..|++|+++++++ |.+.+ ++|+++++|+++. ++.+.+++.++| ++|+|||++|++.++.+++
T Consensus 355 aGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~ 430 (795)
T 3slk_A 355 AGGVGMAAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFADASLR 430 (795)
T ss_dssp TBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTTHHHHT
T ss_pred CCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHH
Confidence 99999999999999999999999665 54544 3899999999987 999999999998 9999999999999999999
Q ss_pred hhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-cchhHHHHHHHHHHHHCCceeeeeecccccccH
Q 019012 246 NMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY-LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENA 324 (347)
Q Consensus 246 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~ 324 (347)
+++++|+++.+|..... .........+++++.++..... +....+.++++++++++|.+++.+..+|+++++
T Consensus 431 ~l~~~Gr~v~iG~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~ 503 (795)
T 3slk_A 431 MLPRGGRFLELGKTDVR-------DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQA 503 (795)
T ss_dssp SCTTCEEEEECCSTTCC-------CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGH
T ss_pred HhcCCCEEEEecccccc-------CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHH
Confidence 99999999999975431 1112223347777777655322 445578899999999999999999999999999
Q ss_pred HHHHHHhhcCcccceEEEEecC
Q 019012 325 PAAFVGLFSGKNVGKQVVRVAC 346 (347)
Q Consensus 325 ~~a~~~~~~~~~~gk~vv~~~~ 346 (347)
++||+.+++++..||+||++++
T Consensus 504 ~eA~~~l~~g~~~GKvVl~~~~ 525 (795)
T 3slk_A 504 PEALRHLSQARHVGKLVLTMPP 525 (795)
T ss_dssp HHHHHHHHHTCCCBEEEEECCC
T ss_pred HHHHHHHhcCCccceEEEecCc
Confidence 9999999999999999998754
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=337.74 Aligned_cols=298 Identities=17% Similarity=0.159 Sum_probs=246.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCC-CcEEEEEEEeecChhccccccc--CCCCCCCC---CCCCCCce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDS-GAFLVKNLYLSCDPYMRGRMRS--SFTSSYIP---PFVPGQPV 80 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~-~~vlV~v~~~~i~~~D~~~~~~--~~~~~~~~---p~i~G~e~ 80 (347)
|||++++++ |++ +.++ ++|.|+|. + +||||||.|++||++|++.+.| .+. ...+ |.++|||+
T Consensus 1 MkA~~~~~~--g~~----l~~~--~~~~P~~~---~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~~~p~v~G~E~ 68 (366)
T 2cdc_A 1 MKAIIVKPP--NAG----VQVK--DVDEKKLD---SYGKIKIRTIYNGICGADREIVNGKLTLS-TLPKGKDFLVLGHEA 68 (366)
T ss_dssp CEEEEECTT--SCC----CEEE--ECCGGGSC---CCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEE
T ss_pred CeEEEEeCC--CCc----eEEE--ECcCCCCC---CCCEEEEEEEEEeeccccHHHHcCCCCCC-CCCcCCCCCcCCcce
Confidence 689999987 642 4554 57777674 8 9999999999999999999888 442 2345 89999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEE---------------------------------ecCcceeEEeeccccceecCCCC
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAG---------------------------------LTGWEEYSLIRKTEQLRKIQPDH 127 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~~~~~~i~p~~ 127 (347)
+| +|++ ++ ++|++||||++ .|+|+||++++++. ++++ |++
T Consensus 69 ~G--~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~ 141 (366)
T 2cdc_A 69 IG--VVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY-LVKI-PKS 141 (366)
T ss_dssp EE--EECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGG-EEEE-CGG
T ss_pred EE--EEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHH-eEEC-cCC
Confidence 88 8888 77 89999999985 27999999999998 9999 999
Q ss_pred CCChhhhhhhcCChhhhHHHHHH--h--hcCCC--C-------CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--
Q 019012 128 HIPLSYHIGLLGMPGFTAYAGFH--E--VCSPK--S-------GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-- 192 (347)
Q Consensus 128 ~~~~~~~~a~l~~~~~ta~~al~--~--~~~~~--~-------~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-- 192 (347)
++ +.|+++.+++|||+++. + .++++ + |++|||+|+ |++|++++|+|+..|++|+++++++
T Consensus 142 ---l~-~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~ 216 (366)
T 2cdc_A 142 ---IE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT 216 (366)
T ss_dssp ---GT-TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCC
T ss_pred ---cc-hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccc
Confidence 88 87778899999999996 4 68888 8 999999999 9999999999999999999999998
Q ss_pred -HhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hH-HHHHHhhhcCCeEEEEcccccccCCCCCC
Q 019012 193 -QKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-ML-DAALLNMRDHGRIAVCGMVSLHSYHDPQG 269 (347)
Q Consensus 193 -~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 269 (347)
++.++++ ++|++.+ | ++ ++.+.+++ +++++|++||++|+. .+ +.++++|+++|+++.+|..... ..
T Consensus 217 ~~~~~~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~ 285 (366)
T 2cdc_A 217 EVEQTVIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG-----SV 285 (366)
T ss_dssp HHHHHHHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSC-----EE
T ss_pred hHHHHHHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCC-----cc
Confidence 8889998 9999888 7 54 45556666 446899999999985 77 9999999999999999875431 12
Q ss_pred ccchHH---HhhcceEeeccccccccchhHHHHHHHHHHHHCCc------eeeeeecccccccHHHHHHH--hhcCcccc
Q 019012 270 IHNLFT---LVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK------IVYVEDMNEGLENAPAAFVG--LFSGKNVG 338 (347)
Q Consensus 270 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------i~~~~~~~~~l~~~~~a~~~--~~~~~~~g 338 (347)
..+... ++.+++++.|+.... .+.++++++++++|. +++.+..+++|+++++|++. +. ++..+
T Consensus 286 ~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~-~~~~g 359 (366)
T 2cdc_A 286 PLDYKTLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREK-EHGEI 359 (366)
T ss_dssp EEEHHHHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCC-CTTCC
T ss_pred ccChhhhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhh-cCCce
Confidence 344455 788999999876644 677899999999999 55777788999999999999 55 55678
Q ss_pred eEEEEec
Q 019012 339 KQVVRVA 345 (347)
Q Consensus 339 k~vv~~~ 345 (347)
|+||+++
T Consensus 360 Kvvi~~~ 366 (366)
T 2cdc_A 360 KIRILWE 366 (366)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=320.89 Aligned_cols=282 Identities=21% Similarity=0.256 Sum_probs=239.8
Q ss_pred CCcEEEEEEEeecChhcccccccCCCCC------CCCCCCCCCceecceEEEEeccCCCCCCCCCEEEEe---cCcceeE
Q 019012 42 SGAFLVKNLYLSCDPYMRGRMRSSFTSS------YIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL---TGWEEYS 112 (347)
Q Consensus 42 ~~~vlV~v~~~~i~~~D~~~~~~~~~~~------~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~ 112 (347)
++||+|||.|+|+|+.|+.+..|.+... ...|.++|+|++| +| ++||+|+++ |+|++|+
T Consensus 1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG--~V----------~vGdrV~g~~~~G~~Aeyv 1626 (2512)
T 2vz8_A 1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSG--RD----------ASGRRVMGMVPAEGLATSV 1626 (2512)
T ss_dssp HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEE--EE----------TTSCCEEEECSSCCSBSEE
T ss_pred CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEE--EE----------ccCCEEEEeecCCceeeEE
Confidence 6899999999999999999888865321 1235789999888 65 379999987 8999999
Q ss_pred EeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 113 LIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 113 ~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
+++++. ++++ |++ ++++ +|++++.++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|++++.+
T Consensus 1627 ~vp~~~-v~~i-Pd~---ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s 1701 (2512)
T 2vz8_A 1627 LLLQHA-TWEV-PST---WTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGS 1701 (2512)
T ss_dssp ECCGGG-EEEC-CTT---SCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred Ecccce-EEEe-CCC---CCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCC
Confidence 999998 9999 999 8886 788888999999999888999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCC
Q 019012 192 SQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDP 267 (347)
Q Consensus 192 ~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 267 (347)
+++.+++++. +|+++++++++. ++.+.+++.+++ ++|+||||++++.+..++++++++|+++.+|......
T Consensus 1702 ~~k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~---- 1776 (2512)
T 2vz8_A 1702 AEKRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSN---- 1776 (2512)
T ss_dssp HHHHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHT----
T ss_pred hhhhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccc----
Confidence 9999999832 678899999887 899999999988 8999999999999999999999999999999654321
Q ss_pred CCccchHHHhhcceEeeccccccc----cchhHHHHHHHHHHHHCCceeeeeecccccccHHHHHHHhhcCcccceEEEE
Q 019012 268 QGIHNLFTLVTKRITMKGFLQSDY----LHLYPRFLDYVISNYKQGKIVYVEDMNEGLENAPAAFVGLFSGKNVGKQVVR 343 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gk~vv~ 343 (347)
.......++.+++++.++..... +....+.++.+.+++.+|.+++.+..+|+++++++|++.+.+++..||+||+
T Consensus 1777 -~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~ 1855 (2512)
T 2vz8_A 1777 -NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQ 1855 (2512)
T ss_dssp -TCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEE
T ss_pred -cCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEE
Confidence 11223456678899988765432 2334556666666777899999888999999999999999999888999998
Q ss_pred ecC
Q 019012 344 VAC 346 (347)
Q Consensus 344 ~~~ 346 (347)
+++
T Consensus 1856 ~~~ 1858 (2512)
T 2vz8_A 1856 VRE 1858 (2512)
T ss_dssp CSC
T ss_pred CCC
Confidence 864
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.4e-24 Score=176.72 Aligned_cols=188 Identities=21% Similarity=0.328 Sum_probs=144.0
Q ss_pred ceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHH
Q 019012 120 LRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 198 (347)
Q Consensus 120 ~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~ 198 (347)
++++ |++ ++++ +|+++.+++|||+++.+.+++++|++|||+||+|++|++++|+++..|++|+++++++++.+.+
T Consensus 4 ~~~~-P~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 4 VVPI-PDT---LADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79 (198)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred eeEC-CCC---CCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 8889 999 8886 7788899999999997778999999999999999999999999999999999999999998888
Q ss_pred HHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHh
Q 019012 199 KNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLV 277 (347)
Q Consensus 199 ~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 277 (347)
+ ++|++.++|.++. ++.+.+.+.+.+ ++|++||+.|.+.++.++++++++|+++.+|...... ...... ..+
T Consensus 80 ~-~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~-~~~ 152 (198)
T 1pqw_A 80 S-RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGL-AAL 152 (198)
T ss_dssp H-TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEG-GGG
T ss_pred H-HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCCh-hHh
Confidence 8 8999888898876 777788887766 8999999999889999999999999999999765310 111222 234
Q ss_pred hcceEeecccccc----ccchhHHHHHHHHHHHHCCceeeeeecc
Q 019012 278 TKRITMKGFLQSD----YLHLYPRFLDYVISNYKQGKIVYVEDMN 318 (347)
Q Consensus 278 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~g~i~~~~~~~ 318 (347)
.+++++.++.... .+....+.++++++++++|++++.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~ 197 (198)
T 1pqw_A 153 AKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA 197 (198)
T ss_dssp TTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred cCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence 6778877643310 1222357799999999999999876543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.95 E-value=5e-09 Score=94.76 Aligned_cols=145 Identities=17% Similarity=0.068 Sum_probs=100.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE--AFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++ +++... +++.+.. ++.+.++ ++|++|+|+
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~ 238 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV 238 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence 489999998 99999999999999999999999999999988 666543 4444433 5555554 499999999
Q ss_pred Chhh-------HHHHHHhhhcCCeEEEEcccccccCCCC-CCccchHHHhhcceEeeccccc-c-ccc----hh-HHHHH
Q 019012 236 GGEM-------LDAALLNMRDHGRIAVCGMVSLHSYHDP-QGIHNLFTLVTKRITMKGFLQS-D-YLH----LY-PRFLD 300 (347)
Q Consensus 236 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~-~~~~~ 300 (347)
+... .+..++.++++|+++.++...+.++... ....+...+..+++++.+.... . .+. .+ ...+.
T Consensus 239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~ 318 (361)
T 1pjc_A 239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP 318 (361)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence 8532 5778899999999999987554322111 1122223344567777664321 1 111 11 34567
Q ss_pred HHHHHHHCCc
Q 019012 301 YVISNYKQGK 310 (347)
Q Consensus 301 ~~~~~l~~g~ 310 (347)
.+++++.+|.
T Consensus 319 ~l~~l~~~G~ 328 (361)
T 1pjc_A 319 YVVKLANQGL 328 (361)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHhCCc
Confidence 8888888774
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=1e-10 Score=107.42 Aligned_cols=167 Identities=15% Similarity=0.108 Sum_probs=122.9
Q ss_pred CCCceecceEEEEeccCCCCCCCCCEEEE------------ecCcceeEEeeccccceecCCCCCCChhhhhhhcCChhh
Q 019012 76 PGQPVEGFGVSKVVDSDNPNFKPGDLVAG------------LTGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGF 143 (347)
Q Consensus 76 ~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ 143 (347)
.|++..+ .+..+|++++.+.+|+.++. .|++++|+..+... ++.+ |+. ++.+.+....+..
T Consensus 77 ~g~~a~~--~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~-a~~~-~k~---v~~~~~~~~~~~s 149 (404)
T 1gpj_A 77 RGSEAVR--HLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRR-AINL-GKR---AREETRISEGAVS 149 (404)
T ss_dssp EHHHHHH--HHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH-HHHH-HHH---HHHHSSTTCSCCS
T ss_pred cCchHhh--hheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHH-Hhhh-hcc---CcchhhhcCCCcc
Confidence 5667555 88889999999999998731 17888898888777 8888 887 7776555566777
Q ss_pred hHHHHHHhhc---CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhH-HHHHHHcCCCeeeecCCHHHHHH
Q 019012 144 TAYAGFHEVC---SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKV-DLLKNKLGFDEAFNYNDETDLVA 218 (347)
Q Consensus 144 ta~~al~~~~---~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~ 218 (347)
++|+++.... .-.+|++|+|+|+ |++|.++++.++..|+ +|++++++.++. +.++ ++|++ ++++. ++.+
T Consensus 150 ~a~~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~ 223 (404)
T 1gpj_A 150 IGSAAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---ELVD 223 (404)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHH
T ss_pred HHHHHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHH
Confidence 8888774322 1257999999997 9999999999999999 999999998886 5556 88875 44442 3333
Q ss_pred HHHHHCCCCccEEEeCCChh-hH--HHHHHh--h--hcCCeEEEEcccc
Q 019012 219 ALKRCFPQGIDIYFDNVGGE-ML--DAALLN--M--RDHGRIAVCGMVS 260 (347)
Q Consensus 219 ~i~~~~~g~~d~vid~~g~~-~~--~~~~~~--l--~~~G~~v~~g~~~ 260 (347)
.+. ++|+|++|++.. .+ ...+.. + +++|.++.++...
T Consensus 224 ~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 224 HLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp HHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred Hhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 332 499999999863 22 244555 4 5577777777643
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=5.1e-08 Score=88.56 Aligned_cols=98 Identities=17% Similarity=0.114 Sum_probs=77.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++++|+|+|+ |++|+++++.++.+|++|+++++++++.+.+++.+|.....+.....++.+.++ ++|++++|++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~ 240 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL 240 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence 5789999997 999999999999999999999999999888883478753333332225544444 4899999987
Q ss_pred hhh-------HHHHHHhhhcCCeEEEEcccc
Q 019012 237 GEM-------LDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 237 ~~~-------~~~~~~~l~~~G~~v~~g~~~ 260 (347)
.+. .+..++.|+++|.++.++...
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~ 271 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ 271 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence 532 678889999999999998643
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-07 Score=86.22 Aligned_cols=148 Identities=16% Similarity=0.100 Sum_probs=93.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++.+|.....+....+++.+.++ ++|++++|++
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g 238 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL 238 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence 4689999998 999999999999999999999999998888873477764344433325545444 4999999998
Q ss_pred hhh-------HHHHHHhhhcCCeEEEEcccccccCCCC-CCccchHHHhhcceEeeccccc--cccch-----hHHHHHH
Q 019012 237 GEM-------LDAALLNMRDHGRIAVCGMVSLHSYHDP-QGIHNLFTLVTKRITMKGFLQS--DYLHL-----YPRFLDY 301 (347)
Q Consensus 237 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~ 301 (347)
... .+..++.|+++|+++.++...+..+... ....+...+..+++++.+.... ..++. ....++.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~ 318 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY 318 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence 542 5788899999999999986543211000 0111222334566776664321 11221 1345677
Q ss_pred HHHHHHCCc
Q 019012 302 VISNYKQGK 310 (347)
Q Consensus 302 ~~~~l~~g~ 310 (347)
+++++.+|.
T Consensus 319 l~~l~~~g~ 327 (369)
T 2eez_A 319 VLKLAEKGL 327 (369)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhcCh
Confidence 788887764
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-08 Score=90.19 Aligned_cols=126 Identities=14% Similarity=0.102 Sum_probs=86.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCH--------------HH----HH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDE--------------TD----LV 217 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~--------------~~----~~ 217 (347)
++++|+|+|+ |.+|++++++++.+|++|+++++++++.+.++ ++|++.+ ++..+. ++ ..
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 6899999996 99999999999999999999999999989998 8998644 233110 00 11
Q ss_pred HHHHHHCCCCccEEEeCC---Chh---h-HHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccc
Q 019012 218 AALKRCFPQGIDIYFDNV---GGE---M-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQ 288 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
+.+.+... ++|+||+|+ |.. . ....++.|++++.++.++...+..+.. ..+...+..+++++.+...
T Consensus 249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~---~~~~~~~~~~~v~i~g~~~ 322 (384)
T 1l7d_A 249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL---SEPGKIVVKHGVKIVGHTN 322 (384)
T ss_dssp HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT---CCTTCEEEETTEEEECCSS
T ss_pred HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeec---ccCCcEEEECCEEEEEeCC
Confidence 22443333 599999999 532 2 378899999999999998654322111 1122234567788887654
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=3.5e-07 Score=83.60 Aligned_cols=125 Identities=12% Similarity=0.115 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecC-------------CHHHH----HH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYN-------------DETDL----VA 218 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~-------------~~~~~----~~ 218 (347)
++.+|+|+|+ |.+|+.++++|+.+|++|++++++.++.+.++ ++|+..+ ++.. .. ++ ..
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~ 247 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME 247 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence 5889999996 99999999999999999999999999988888 8998643 2221 11 11 11
Q ss_pred HHHHHCCCCccEEEeCC---Ch---hh-HHHHHHhhhcCCeEEEEcccccccCCCCCCccchH-HHhhcceEeecccc
Q 019012 219 ALKRCFPQGIDIYFDNV---GG---EM-LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLF-TLVTKRITMKGFLQ 288 (347)
Q Consensus 219 ~i~~~~~g~~d~vid~~---g~---~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 288 (347)
.+.+... ++|+||+++ |. .. ....++.|++++.++.++...+..+.. ..... .+..+++++.|...
T Consensus 248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~---~~~~~p~~~~~gv~i~g~~~ 321 (401)
T 1x13_A 248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY---TVPGEIFTTENGVKVIGYTD 321 (401)
T ss_dssp HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT---CCTTSEEECTTSCEEECCSC
T ss_pred HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc---ccCCCceEEECCEEEEeeCC
Confidence 2333222 589999995 31 12 368899999999999998753322111 11111 14567788887643
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=5e-07 Score=84.13 Aligned_cols=105 Identities=19% Similarity=0.246 Sum_probs=83.1
Q ss_pred hhhhHHHHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHH
Q 019012 141 PGFTAYAGFHEVC-SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAA 219 (347)
Q Consensus 141 ~~~ta~~al~~~~-~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 219 (347)
...++|+++.+.. ...+|++|+|+|. |.+|+.+++.++.+|++|+++++++.+.+.++ ++|++ +++ +.+.
T Consensus 256 ~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~~------l~e~ 326 (494)
T 3ce6_A 256 TRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VVT------VEEA 326 (494)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECC------HHHH
T ss_pred hhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Eec------HHHH
Confidence 3456777764332 2688999999996 99999999999999999999999999888888 88985 332 2222
Q ss_pred HHHHCCCCccEEEeCCChh-hHH-HHHHhhhcCCeEEEEccc
Q 019012 220 LKRCFPQGIDIYFDNVGGE-MLD-AALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 220 i~~~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~ 259 (347)
+ .++|+|+++++.. .+. ..++.|+++|+++.+|..
T Consensus 327 l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 327 I-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp G-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred H-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 2 2589999999864 344 789999999999999874
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.28 E-value=5e-07 Score=76.98 Aligned_cols=102 Identities=13% Similarity=0.073 Sum_probs=73.7
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCC-CeeeecCCHHHHHHHHHH
Q 019012 147 AGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGF-DEAFNYNDETDLVAALKR 222 (347)
Q Consensus 147 ~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~vi~~~~~~~~~~~i~~ 222 (347)
+.+ ....+.++++||..|+ | .|..++.+++. +.+|++++.+++..+.+++. .+. ..+-.... ++ .+
T Consensus 82 ~~~-~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~----~~ 151 (248)
T 2yvl_A 82 YIA-LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV--DF----KD 151 (248)
T ss_dssp HHH-HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS--CT----TT
T ss_pred HHH-HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc--Ch----hh
Confidence 444 5577889999999995 6 69999999998 88999999999988887732 243 11111111 11 11
Q ss_pred HC-C-CCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 223 CF-P-QGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 223 ~~-~-g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. . +.||+|+...+. ..++.+.+.|+++|+++....
T Consensus 152 ~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 152 AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred cccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 22 2 379999987764 578999999999999988754
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.28 E-value=4.6e-06 Score=71.93 Aligned_cols=106 Identities=15% Similarity=0.196 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCC--CCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
-+|+.+||+||++++|++.++.+...|++|+++++++++.+.+.+++|... ..|-.+++++.+.+.+... |++|+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999999999999999998887765777532 3465555333333333222 46999
Q ss_pred EEeCCChh-----------hH---------------HHHHHhhhcCCeEEEEccccc
Q 019012 231 YFDNVGGE-----------ML---------------DAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 231 vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 261 (347)
++++.|.. .+ +.++..|+++|+++.++....
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~ 163 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG 163 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence 99998731 11 334556778899999886554
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.23 E-value=5.7e-06 Score=74.22 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee-e--------cCC---H---HHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-N--------YND---E---TDLVAALK 221 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~--------~~~---~---~~~~~~i~ 221 (347)
++.+|+|+|+ |.+|+.+++.++.+|++|++.+++.++.+.++ ++|++.+- + +.. . ..-...+.
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 6789999997 99999999999999999999999999999999 88875321 1 000 0 00111222
Q ss_pred HHCCCCccEEEeCCCh-----h--hHHHHHHhhhcCCeEEEEcccccccC
Q 019012 222 RCFPQGIDIYFDNVGG-----E--MLDAALLNMRDHGRIAVCGMVSLHSY 264 (347)
Q Consensus 222 ~~~~g~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~ 264 (347)
+.. ..+|+||.++.. + ..+..++.|++++.++.+....+.++
T Consensus 261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 222 259999998632 1 34789999999999999987666544
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.22 E-value=7.4e-07 Score=69.37 Aligned_cols=108 Identities=9% Similarity=0.079 Sum_probs=76.1
Q ss_pred hhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHH
Q 019012 141 PGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220 (347)
Q Consensus 141 ~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i 220 (347)
+.+++++++. ......+++|+|+|+ |.+|.+.++.++..|++|++.+++.++.+.+.++++.. +.... ++.+.+
T Consensus 5 ~~sv~~~a~~-~~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~ 78 (144)
T 3oj0_A 5 KVSIPSIVYD-IVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLI 78 (144)
T ss_dssp CCSHHHHHHH-HHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHH
T ss_pred cccHHHHHHH-HHHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHh
Confidence 3456666663 333345899999996 99999999999889999999999998877655478853 33333 233334
Q ss_pred HHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 221 KRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 221 ~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
. ++|+|+.|++..........+++++.++.++.+
T Consensus 79 ~-----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 79 K-----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP 112 (144)
T ss_dssp H-----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred c-----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence 3 489999999864211122677888888888764
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.21 E-value=6.9e-06 Score=74.26 Aligned_cols=125 Identities=15% Similarity=0.116 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee-e------------cCCH--HHH----H
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-N------------YNDE--TDL----V 217 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~------------~~~~--~~~----~ 217 (347)
++.+|+|+|+ |.+|+.++++++.+|++|++.+++..+++.++ ++|+..+. + +... ..+ .
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 6789999997 99999999999999999999999999999998 88875221 1 1100 000 1
Q ss_pred HHHHHHCCCCccEEEeCCCh-----h--hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 218 AALKRCFPQGIDIYFDNVGG-----E--MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
..+.+.. .++|+||.|+.. + .-+..++.|++++.++.+....+.++..... ...+..+++++.+..
T Consensus 267 ~~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~---~~~~~~~GV~~~gv~ 339 (405)
T 4dio_A 267 ALVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEA---GKVTEVGGVRIVGHL 339 (405)
T ss_dssp HHHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCT---TEEEEETTEEEEECS
T ss_pred hHHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCC---CCeEEECCEEEEEeC
Confidence 1222211 159999999631 1 3478899999999999998655443322211 111234566666554
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.4e-05 Score=56.58 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+. +.+.+... ++|+||++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~ 76 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISA 76 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEEC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence 3568999998 999999999999999 69999999999888887 667642 3455443 22333332 59999999
Q ss_pred CChhhHHHHHHhhhc-CCeEEEE
Q 019012 235 VGGEMLDAALLNMRD-HGRIAVC 256 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~-~G~~v~~ 256 (347)
++........+...+ +-+++.+
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 77 APFFLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECC
T ss_pred CCchhhHHHHHHHHHhCCCEEEe
Confidence 986544444444444 4444433
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=2.1e-05 Score=68.14 Aligned_cols=99 Identities=13% Similarity=0.061 Sum_probs=73.7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCe--eeecCCHHHHHHHHHHHCCC
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDE--AFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~--vi~~~~~~~~~~~i~~~~~g 226 (347)
.++++++++||.+|+ |+.++.++.+++..|++|++++.+++..+.+++. .|.+. ++..+.. + +.++
T Consensus 117 la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~-~-------l~d~ 187 (298)
T 3fpf_A 117 LGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDET-V-------IDGL 187 (298)
T ss_dssp HTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGG-G-------GGGC
T ss_pred HcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchh-h-------CCCC
Confidence 468899999999995 8777788888888899999999999988888732 35422 2222221 1 2234
Q ss_pred CccEEEeCCCh----hhHHHHHHhhhcCCeEEEEccc
Q 019012 227 GIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.||+|+.+... ..++.+.+.|++||+++.....
T Consensus 188 ~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 188 EFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 79999976543 3788999999999999987643
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.04 E-value=2.4e-05 Score=66.95 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++...+.+.. .+.+|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999999999999999999998887776565542 1245555423333333221 1369999
Q ss_pred EeCCChh-----------hH---------------HHHHHhhhcCCeEEEEccccc
Q 019012 232 FDNVGGE-----------ML---------------DAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 232 id~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+++.|.. .+ +.++..++++|+++.++....
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~ 142 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD 142 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence 9988731 11 223334556799999886544
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=97.95 E-value=7.8e-05 Score=64.16 Aligned_cols=80 Identities=24% Similarity=0.380 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+.+++.+.+.+... +++|++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999999999999999999988777654666532 2355554233333332221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 106 vnnAg 110 (266)
T 3grp_A 106 VNNAG 110 (266)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00012 Score=62.63 Aligned_cols=80 Identities=14% Similarity=0.252 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. ...|..+.+++.+.+.+.. .+++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999999999999999988889999999999988877766466542 1245555423333333321 2369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 87 v~~Ag 91 (259)
T 4e6p_A 87 VNNAA 91 (259)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=3.9e-05 Score=69.59 Aligned_cols=103 Identities=18% Similarity=0.188 Sum_probs=77.3
Q ss_pred hHHHHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH
Q 019012 144 TAYAGFHEVC-SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 144 ta~~al~~~~-~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
..+.++.+.. ..-.|++++|.|. |.+|+.+++.++.+|++|+++++++.+...+. ..|.. +. ++.+.+.
T Consensus 205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal~- 274 (435)
T 3gvp_A 205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVIR- 274 (435)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHTT-
T ss_pred HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHHh-
Confidence 4455554433 3468999999995 99999999999999999999999887766666 66753 22 2222222
Q ss_pred HCCCCccEEEeCCChh-hH-HHHHHhhhcCCeEEEEcccc
Q 019012 223 CFPQGIDIYFDNVGGE-ML-DAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 223 ~~~g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~ 260 (347)
..|+++.|.|.. .+ ...++.|++++.++.++...
T Consensus 275 ----~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 275 ----QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp ----TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred ----cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence 489999998753 34 48899999999999998643
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00014 Score=62.52 Aligned_cols=80 Identities=15% Similarity=0.176 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++...+++... +.+|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 4689999999999999999999899999999999988877665455422 12455554233333333211 368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 85 vnnAg 89 (263)
T 2a4k_A 85 AHFAG 89 (263)
T ss_dssp EEGGG
T ss_pred EECCC
Confidence 99887
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00011 Score=62.86 Aligned_cols=80 Identities=18% Similarity=0.244 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHCCC-C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCFPQ-G 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~g-~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+.... +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999998889999999999987766554233 311 124665543444444433222 3
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 86 id~lv~~Ag 94 (260)
T 2z1n_A 86 ADILVYSTG 94 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00014 Score=62.85 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=71.7
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC
Q 019012 150 HEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 150 ~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
.....+.++++||-.|+ |. |..++.+++.. +.+|++++.+++..+.+++. .+...-+..... ++.+. +.
T Consensus 105 ~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~ 178 (277)
T 1o54_A 105 AMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FD 178 (277)
T ss_dssp HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CS
T ss_pred HHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---cc
Confidence 35567899999999995 55 88899999986 46999999999888877632 254111111111 22111 12
Q ss_pred CCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|+-.... ..+..+.+.|+++|+++....
T Consensus 179 ~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 179 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2379999976653 478899999999999988753
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00011 Score=66.81 Aligned_cols=102 Identities=19% Similarity=0.129 Sum_probs=76.3
Q ss_pred HHHHHHhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 145 AYAGFHEV-CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 145 a~~al~~~-~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.+.++.+. ...-.|++++|.|. |.+|+.+++.++.+|++|+++++++.+...+. ..|.. +. ++.+.++
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~-- 301 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS-- 301 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG--
T ss_pred HHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh--
Confidence 44555433 23468999999995 99999999999999999999998887655555 56653 22 2222232
Q ss_pred CCCCccEEEeCCChh-h-HHHHHHhhhcCCeEEEEcccc
Q 019012 224 FPQGIDIYFDNVGGE-M-LDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 224 ~~g~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~~ 260 (347)
..|+++.+++.. . -...+..|++++.++.+|...
T Consensus 302 ---~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 302 ---TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp ---GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred ---hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 489999998864 3 368899999999999988643
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00011 Score=64.20 Aligned_cols=79 Identities=14% Similarity=0.243 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
-.|+++||+||+|++|.++++.+...|++|++++++.++.+.+.++++.. ...|..+.+++.+.+++. +.+|+++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv 91 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI 91 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence 35789999999999999999999899999999999998887776455432 124555543444444443 4699999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
.+.|
T Consensus 92 ~nAg 95 (291)
T 3rd5_A 92 NNAG 95 (291)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9988
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0001 Score=62.62 Aligned_cols=80 Identities=13% Similarity=0.188 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++|+. ...|..+.+++.+.+.+... +.+|++++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4679999999999999999999899999999999988777665455642 22465554233333333211 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 84 ~Ag 86 (245)
T 1uls_A 84 YAG 86 (245)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00015 Score=62.04 Aligned_cols=80 Identities=16% Similarity=0.212 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. ...|..+.+++.+.+++... +++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999999999999999998889999999999988776655344321 12455554333333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|++.|
T Consensus 86 v~~Ag 90 (260)
T 1nff_A 86 VNNAG 90 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00027 Score=60.66 Aligned_cols=105 Identities=18% Similarity=0.169 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-----C---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-----D---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-----~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.. . ...|..+.+++...+++... +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999989999999999988766544323321 1 12355554233333333211 3
Q ss_pred CccEEEeCCCh---hhH---------------HHHHHhhhc-----CCeEEEEccccc
Q 019012 227 GIDIYFDNVGG---EML---------------DAALLNMRD-----HGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~---~~~---------------~~~~~~l~~-----~G~~v~~g~~~~ 261 (347)
.+|+++++.|. +.+ +.+++.+.+ .|+++.++....
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 143 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG 143 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence 68999999883 111 234445543 589999886544
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=9.8e-05 Score=62.62 Aligned_cols=103 Identities=15% Similarity=0.063 Sum_probs=71.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
+++|||+||++++|++.++.+...|++|+++++++++.+.+. +.+.. ...|-.++++....+.+... |++|+++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 478999999999999999999999999999999998888777 43332 22455554333333333222 4699999
Q ss_pred eCCChh-----------hH---------------HHHHHhh-hcCCeEEEEccccc
Q 019012 233 DNVGGE-----------ML---------------DAALLNM-RDHGRIAVCGMVSL 261 (347)
Q Consensus 233 d~~g~~-----------~~---------------~~~~~~l-~~~G~~v~~g~~~~ 261 (347)
++.|.. .+ +.++..| +.+|+++.++....
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~ 136 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA 136 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence 988721 11 2234444 45799999887554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00019 Score=61.14 Aligned_cols=80 Identities=20% Similarity=0.216 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-E--AFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+.+++...+++.. .+.+|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999999999889999999999988777665455532 1 235555423333333321 1368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 85 v~~Ag 89 (253)
T 1hxh_A 85 VNNAG 89 (253)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=8.8e-05 Score=63.06 Aligned_cols=80 Identities=20% Similarity=0.292 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.|+++||+||++++|.+.++.+...|++|++++++.++.+.+.++++... ..|..+.+++.+.+.+... +++|++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 57899999999999999999999999999999999988777664666431 2455554233333332221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 85 v~nAg 89 (247)
T 3rwb_A 85 VNNAS 89 (247)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00012 Score=62.29 Aligned_cols=105 Identities=18% Similarity=0.291 Sum_probs=72.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+|+.+||+||++++|++.++.+...|++|+++++++++.+.+.++ .|.. ...|-.+++++...+++... |.+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999889999999999999877665433 3442 23465555344333333222 469
Q ss_pred cEEEeCCCh--h----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 229 DIYFDNVGG--E----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 229 d~vid~~g~--~----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
|+++++.|. . .+ +.++..|.+ +|++|.++...+
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g 147 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG 147 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhh
Confidence 999998872 1 11 334555533 689999987654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0002 Score=62.05 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC---C---eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF---D---EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +. . ...|-.+.+++.+.+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999899999999999988765544233 32 1 12355554333333333221
Q ss_pred CCccEEEeCCCh
Q 019012 226 QGIDIYFDNVGG 237 (347)
Q Consensus 226 g~~d~vid~~g~ 237 (347)
+.+|+++++.|.
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 369999999884
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00022 Score=61.90 Aligned_cols=104 Identities=22% Similarity=0.306 Sum_probs=68.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHH----HHHHcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDL----LKNKLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~----~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.++++||+||+|++|.++++.+...|++|++++++.++ .+. ++ +.|.. ...|..+.+++...+.+... +
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999987643 222 23 33432 12355554233333332211 3
Q ss_pred CccEEEeCCChh--------------------------hHHHHHHhhhcCCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE--------------------------MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
++|++|++.|.. ..+.+++.|+..|+++.++....
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 167 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG 167 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence 699999998731 11334445556799999987544
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0002 Score=61.98 Aligned_cols=80 Identities=25% Similarity=0.454 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCC-C----eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGF-D----EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~-~----~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++ .+. . ...|..+.+++...+.+... +
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999988999999999998776554322 232 1 12355554233333332221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|++|.+.|
T Consensus 111 ~iD~vi~~Ag 120 (279)
T 1xg5_A 111 GVDICINNAG 120 (279)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00014 Score=62.16 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ..+|..+.+++.+.+++... +.+|++
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 87 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL 87 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999899999999999998887776566643 22455554233333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 88 i~~Ag 92 (261)
T 3n74_A 88 VNNAG 92 (261)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99887
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.75 E-value=3.4e-05 Score=65.13 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-CeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.|+++||+||++++|++.++.+...|++|+++++++++.+... .-.+ ....|-.+++++.+.++++ |++|+++++.
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDiLVNNA 86 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEAL--PRLDVLVNNA 86 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 6999999999999999999999999999999999877654322 1111 1235666653444444442 4799999998
Q ss_pred Ch--h-------hH---------------HHHHHhhh-cCCeEEEEccccc
Q 019012 236 GG--E-------ML---------------DAALLNMR-DHGRIAVCGMVSL 261 (347)
Q Consensus 236 g~--~-------~~---------------~~~~~~l~-~~G~~v~~g~~~~ 261 (347)
|- + .+ +.++..|+ ++|++|.++....
T Consensus 87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~ 137 (242)
T 4b79_A 87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS 137 (242)
T ss_dssp CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence 82 1 11 33455564 4799999987654
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=9.5e-05 Score=58.00 Aligned_cols=95 Identities=18% Similarity=0.221 Sum_probs=62.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
....++.+|+|+|+ |.+|+..++.++..|.+|+++++++++.+.+++..|.. ++..+.. + .+.+.+....++|+||
T Consensus 14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVF 89 (155)
T ss_dssp ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEE
T ss_pred hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEE
Confidence 34567889999996 99999999999999999999999988776554234543 3332211 1 1223332113699999
Q ss_pred eCCChh-hHHHHHHhhhc-CC
Q 019012 233 DNVGGE-MLDAALLNMRD-HG 251 (347)
Q Consensus 233 d~~g~~-~~~~~~~~l~~-~G 251 (347)
.+++.+ ....+...++. .|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~ 110 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARYMFN 110 (155)
T ss_dssp ECSSCHHHHHHHHHHHHHTSC
T ss_pred EEeCCcHHHHHHHHHHHHHCC
Confidence 999974 33444445554 44
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0001 Score=62.67 Aligned_cols=80 Identities=29% Similarity=0.465 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+.++.. ..+|..+.+++.+.+++... +++|++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999999999999999999999999999998877665454432 23466654333333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 88 v~nAg 92 (248)
T 3op4_A 88 VNNAG 92 (248)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0001 Score=62.09 Aligned_cols=79 Identities=14% Similarity=0.083 Sum_probs=57.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
++++||+||+|++|.+.+..+...|++|+++++++++.+.+.++++.. ...|..+.+++...+.+... +.+|+++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 578999999999999999988889999999999998877766455421 22455554233333333221 3699999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
++.|
T Consensus 83 nnAg 86 (235)
T 3l6e_A 83 HCAG 86 (235)
T ss_dssp EECC
T ss_pred ECCC
Confidence 9887
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00015 Score=62.69 Aligned_cols=80 Identities=16% Similarity=0.307 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++.+.+.+... +++|++
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999999999999999899999999999998877766466543 12455554333333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 106 v~nAg 110 (277)
T 4dqx_A 106 VNNAG 110 (277)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00014 Score=62.11 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++...+++... +++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999999999999999999999999999999988777665355432 12455554344433333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|++.|
T Consensus 84 v~nAg 88 (254)
T 1hdc_A 84 VNNAG 88 (254)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00015 Score=62.86 Aligned_cols=80 Identities=20% Similarity=0.271 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.++++.. ...|..+.+++...+.+... +.+|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999999999999999998887776455542 22455554233333333211 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 84 vnnAg 88 (281)
T 3zv4_A 84 IPNAG 88 (281)
T ss_dssp ECCCC
T ss_pred EECCC
Confidence 99987
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00044 Score=58.98 Aligned_cols=79 Identities=16% Similarity=0.258 Sum_probs=55.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 578999999999999999999899999999999987665543232 432 1245555423333333221 24699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|++.|
T Consensus 82 ~lv~nAg 88 (256)
T 1geg_A 82 VIVNNAG 88 (256)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999987
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00019 Score=62.72 Aligned_cols=92 Identities=20% Similarity=0.259 Sum_probs=71.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|++|+|+|+ |.+|..+++.++..|++|++.+++.++.+.+. ++|+. .++.. ++.+.+ ...|+|+.++
T Consensus 153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l-----~~aDvVi~~~ 221 (293)
T 3d4o_A 153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQEL-----RDVDVCINTI 221 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHT-----TTCSEEEECC
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHh-----cCCCEEEECC
Confidence 47899999995 99999999999999999999999988877777 78864 33322 222222 2589999999
Q ss_pred Chhh-HHHHHHhhhcCCeEEEEcc
Q 019012 236 GGEM-LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~~-~~~~~~~l~~~G~~v~~g~ 258 (347)
.... -...+..+++++.++.++.
T Consensus 222 p~~~i~~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 222 PALVVTANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred ChHHhCHHHHHhcCCCCEEEEecC
Confidence 7532 3467788999999999875
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00013 Score=62.97 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++.+.+.+... +.+|++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999999999999999999999999999999988777665466542 23466654333333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 90 v~nAg 94 (271)
T 3tzq_B 90 DNNAA 94 (271)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00014 Score=61.82 Aligned_cols=80 Identities=21% Similarity=0.330 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCCCCccEE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
..+++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.... ..|..+.+.+.+.+++. +++|++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l 88 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL 88 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence 4578899999999999999999998999999999999988777764554322 23555442333334332 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+.|
T Consensus 89 i~~Ag 93 (249)
T 3f9i_A 89 VCNAG 93 (249)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.71 E-value=7.3e-05 Score=63.71 Aligned_cols=105 Identities=21% Similarity=0.252 Sum_probs=72.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.++ .|.. ...|-.++++..+.+++.. .|++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 589999999999999999999999999999999998876554423 3432 1245555534444444332 2479
Q ss_pred cEEEeCCChh-----------h---------------HHHHHHhhh---cCCeEEEEccccc
Q 019012 229 DIYFDNVGGE-----------M---------------LDAALLNMR---DHGRIAVCGMVSL 261 (347)
Q Consensus 229 d~vid~~g~~-----------~---------------~~~~~~~l~---~~G~~v~~g~~~~ 261 (347)
|+++++.|.. . .+.+++.|. .+|++|.++....
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~ 149 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS 149 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence 9999998831 1 133455552 3689999987654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00028 Score=61.86 Aligned_cols=80 Identities=19% Similarity=0.269 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC----eeeecCCH-HHHH---HHHHHHC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD----EAFNYNDE-TDLV---AALKRCF 224 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~-~~~~---~~i~~~~ 224 (347)
..++++||+||+|++|.++++.+...|++|++++++.++.+.+.+++ +.. ..+|..+. +... +.+.+..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 35789999999999999999988889999999999988765544233 211 12354442 2333 3333322
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
+.+|++|++.|
T Consensus 90 -g~iD~lv~nAg 100 (311)
T 3o26_A 90 -GKLDILVNNAG 100 (311)
T ss_dssp -SSCCEEEECCC
T ss_pred -CCCCEEEECCc
Confidence 36999999998
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0002 Score=61.59 Aligned_cols=80 Identities=16% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~-~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+++++||+||+|++|...++.+.. .|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.++.. ++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999998888877 8999999999887655443232 321 22455554233333332211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 83 id~li~~Ag 91 (276)
T 1wma_A 83 LDVLVNNAG 91 (276)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 999999987
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00014 Score=62.91 Aligned_cols=80 Identities=24% Similarity=0.437 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.|+++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++...+.+... +++|++
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999999999999988889999999999988877766466542 22465654333333333211 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 108 vnnAg 112 (277)
T 3gvc_A 108 VANAG 112 (277)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.69 E-value=9.5e-05 Score=64.18 Aligned_cols=80 Identities=19% Similarity=0.278 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.|+++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+.+... +.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999889999999999988766554333 111 22465554333333333211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 112 iD~lvnnAG 120 (281)
T 4dry_A 112 LDLLVNNAG 120 (281)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00016 Score=62.45 Aligned_cols=81 Identities=19% Similarity=0.233 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
..++++||+||++++|.+.++.+...|++|++++++.++.+.+.++++.. ...|..+.+++...+.+... +++|+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999999999999999999899999999999998877766466532 22455554233333333221 36999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++++.|
T Consensus 106 lVnnAg 111 (272)
T 4dyv_A 106 LFNNAG 111 (272)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999987
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00018 Score=66.42 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=74.7
Q ss_pred HHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 145 AYAGFHEVCSP-KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 145 a~~al~~~~~~-~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.+.++.+..+. -.|++++|+|+ |++|+++++.++..|++|+++++++.+...+. ..|++ +.+..+ .
T Consensus 251 l~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~lee----------~ 317 (488)
T 3ond_A 251 LPDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLED----------V 317 (488)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGGG----------T
T ss_pred HHHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHHH----------H
Confidence 34444443333 57999999997 79999999999999999999999988877777 66653 222211 0
Q ss_pred CCCCccEEEeCCCh-hhH-HHHHHhhhcCCeEEEEccc
Q 019012 224 FPQGIDIYFDNVGG-EML-DAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 224 ~~g~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~ 259 (347)
...+|+++++.|. ..+ ...++.+++++.++.+|..
T Consensus 318 -~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 318 -VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp -TTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred -HHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 1258999999986 333 4588899999999998864
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00052 Score=58.15 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----C-eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----D-EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.. . ...|..+.+++.+.+.+... +.+|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999988999999999998776665434431 1 12455554233333332211 3699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|.+.|
T Consensus 85 ~li~~Ag 91 (251)
T 1zk4_A 85 TLVNNAG 91 (251)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999987
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00032 Score=59.73 Aligned_cols=78 Identities=18% Similarity=0.251 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHH---HHHHHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETD---LVAALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~---~~~~i~~~~~g~ 227 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ |.. ...|-.+.++ +.+.+.+. ++
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence 5789999999999999999999999999999999988766554333 432 2245555423 33344444 57
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 84 id~lv~nAg 92 (252)
T 3h7a_A 84 LEVTIFNVG 92 (252)
T ss_dssp EEEEEECCC
T ss_pred ceEEEECCC
Confidence 999999988
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0002 Score=61.19 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC---CC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g---~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++. .. ...|..+.+++...+.+... +++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999988777654442 21 12455554333333333221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 85 d~lv~nAg 92 (257)
T 3imf_A 85 DILINNAA 92 (257)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00022 Score=59.90 Aligned_cols=96 Identities=20% Similarity=0.188 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-Cee-eecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEA-FNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+.+|||+||+|.+|...++.+...|++|+++++++++.+.+. ..++ ..+ .|.. +.+.+.. +++|+||.+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~------~~~~~~~-~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVANLE------EDFSHAF-ASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECCTT------SCCGGGG-TTCSEEEEC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcccH------HHHHHHH-cCCCEEEEC
Confidence 4789999999999999999999999999999999999888777 6666 321 2322 1233322 269999999
Q ss_pred CChh--------------hHHHHHHhhhc--CCeEEEEcccc
Q 019012 235 VGGE--------------MLDAALLNMRD--HGRIAVCGMVS 260 (347)
Q Consensus 235 ~g~~--------------~~~~~~~~l~~--~G~~v~~g~~~ 260 (347)
.|.. .....++.+++ .++++.++...
T Consensus 92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 9842 11234444443 37899888744
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0002 Score=61.54 Aligned_cols=80 Identities=16% Similarity=0.361 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. ..+|..+.+++...+.+... +.+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999899999999999988766654333 432 12465554333333333221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 83 D~lVnnAG 90 (264)
T 3tfo_A 83 DVLVNNAG 90 (264)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00033 Score=60.08 Aligned_cols=80 Identities=6% Similarity=0.040 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEEECChHhHHHHH---HHcCC---C-eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGA--VGQLVGQLAKLHGCYVVGSAGSSQKVDLLK---NKLGF---D-EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~--~G~~ai~la~~~G~~V~~~~~~~~~~~~~~---~~~g~---~-~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||+|. +|.+.++.+...|++|++++++++..+.+. ++.+. . ...|..+.+++.+.+++...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4789999999954 999999888889999999998875444433 12332 1 12455544244433333321
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|+++.+.|
T Consensus 86 g~id~li~~Ag 96 (266)
T 3oig_A 86 GVIHGIAHCIA 96 (266)
T ss_dssp SCCCEEEECCC
T ss_pred CCeeEEEEccc
Confidence 36999999886
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00026 Score=60.89 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
-.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+... +
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999889999999999987765543233 542 12455554233333333211 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|++|++.|
T Consensus 99 ~iD~lvnnAg 108 (267)
T 1vl8_A 99 KLDTVVNAAG 108 (267)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00057 Score=58.89 Aligned_cols=104 Identities=20% Similarity=0.296 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
-.++++||+||++++|.+.++.+...|++|++++++. ++.+.+.+ +.|.. ...|..+.+++.+.+.+... +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999989999999986554 44333321 33432 12455554334333333221 3
Q ss_pred CccEEEeCCChh--------------------------hHHHHHHhhhcCCeEEEEccc
Q 019012 227 GIDIYFDNVGGE--------------------------MLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 259 (347)
++|+++++.|.. ..+.++..++++|+++.++..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 699999998730 113344556678999998764
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00013 Score=62.32 Aligned_cols=80 Identities=20% Similarity=0.214 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+.+++...+++... +++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999999999999999999999999999999887766555355432 12455554233333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 86 v~nAg 90 (257)
T 3tpc_A 86 VNCAG 90 (257)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0003 Score=59.67 Aligned_cols=80 Identities=24% Similarity=0.388 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ |.. ...|..+.+++...+.+... +++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999889999999999988766554233 432 12455554233333332211 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 86 d~lv~nAg 93 (247)
T 2jah_A 86 DILVNNAG 93 (247)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00028 Score=60.61 Aligned_cols=80 Identities=18% Similarity=0.247 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+.+... +
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999998889999999999987765543232 432 12465554334333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|++|++.|
T Consensus 92 ~id~lv~nAg 101 (267)
T 1iy8_A 92 RIDGFFNNAG 101 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0003 Score=58.51 Aligned_cols=97 Identities=10% Similarity=0.094 Sum_probs=66.3
Q ss_pred CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEECChH-hHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 159 EYVFVSAASGAVGQLVGQLAK-LHGCYVVGSAGSSQ-KVDLLKNKLGFD-E--AFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~-~~G~~V~~~~~~~~-~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
++|||+||+|.+|...++.+. ..|++|++++++++ +.+.+. ..+.. . ..|..+.+++.+.++ ++|++|.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVT-----NAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHT-----TCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHc-----CCCEEEE
Confidence 579999999999999888887 89999999999988 665553 22221 2 235555423333332 5899999
Q ss_pred CCChhh--HHHHHHhhhcC--CeEEEEccccc
Q 019012 234 NVGGEM--LDAALLNMRDH--GRIAVCGMVSL 261 (347)
Q Consensus 234 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~ 261 (347)
+.|... ...+++.+... ++++.++....
T Consensus 80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence 998522 45556666543 58988876443
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0003 Score=60.25 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+.+... ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999889999999999987765543233 432 12455554233333332211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 86 id~lv~~Ag 94 (263)
T 3ai3_A 86 ADILVNNAG 94 (263)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00041 Score=60.03 Aligned_cols=78 Identities=21% Similarity=0.214 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC-CCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP-QGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~-g~~d~vi 232 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.++++.. ..+|..+.+++...+.+... +++|+++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 4789999999999999999998889999999999998887776566643 22465555345555555422 3789999
Q ss_pred eC
Q 019012 233 DN 234 (347)
Q Consensus 233 d~ 234 (347)
.+
T Consensus 109 ~~ 110 (281)
T 3ppi_A 109 VA 110 (281)
T ss_dssp EC
T ss_pred Ec
Confidence 88
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00045 Score=60.20 Aligned_cols=104 Identities=16% Similarity=0.225 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHH---HcCCCe---eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKN---KLGFDE---AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.|+++||+||+|++|.+.++.+...|++|++++++.++ .+.+.+ +.+... ..|..+.+++.+.+.+... +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987653 222221 334321 2355554233333333221 36
Q ss_pred ccEEEeCCChh---------------------------hHHHHHHhhhcCCeEEEEcccc
Q 019012 228 IDIYFDNVGGE---------------------------MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 228 ~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
+|+++++.|.. ..+.++..++++|+++.++...
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~ 185 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV 185 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence 99999987621 0122344456688999887643
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00052 Score=59.04 Aligned_cols=105 Identities=18% Similarity=0.261 Sum_probs=68.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
-.++++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..|.. ...|..+.+++.+.+++... +
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999987764 443333321 33432 12455554344333333221 3
Q ss_pred CccEEEeCCChh--------------------------hHHHHHHhhhcCCeEEEEcccc
Q 019012 227 GIDIYFDNVGGE--------------------------MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
.+|+++++.|.. ..+.++..+.++|+++.++...
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 699999988731 1133455667789999988754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00041 Score=59.82 Aligned_cols=80 Identities=16% Similarity=0.250 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHH---HHHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLV---AALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~---~~i~~~~~g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++. +.+.+..++.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999987765543232 432 224555542333 3333333357
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 100 id~lv~nAg 108 (273)
T 1ae1_A 100 LNILVNNAG 108 (273)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 999999987
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00027 Score=61.11 Aligned_cols=80 Identities=23% Similarity=0.298 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+++... +++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999899999999999987765554232 321 22455554334333333221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 111 D~lvnnAg 118 (276)
T 3r1i_A 111 DIAVCNAG 118 (276)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00034 Score=59.51 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----C--CC-eeeec--CCHHHHHHHHHHHC--
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----G--FD-EAFNY--NDETDLVAALKRCF-- 224 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g--~~-~vi~~--~~~~~~~~~i~~~~-- 224 (347)
-.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ + +. ..+|. .+.+++.+.+.+..
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 45789999999999999999998899999999999988766554232 2 11 22344 44323333333221
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
.+.+|+++++.|
T Consensus 90 ~g~id~lv~nAg 101 (252)
T 3f1l_A 90 YPRLDGVLHNAG 101 (252)
T ss_dssp CSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 236999999887
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00035 Score=60.13 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE--AFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++.... ..|..+.+++...+++... +++|++|
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57899999999999999999999999999999999887776653443212 2455554233333332211 3699999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
++.|
T Consensus 88 ~nAg 91 (270)
T 1yde_A 88 NNAG 91 (270)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9887
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00045 Score=59.02 Aligned_cols=80 Identities=15% Similarity=0.249 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHH---HHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAA---LKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~---i~~~~~g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+. +.+..++.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999998889999999999987765543232 432 12455554233333 33333257
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 88 id~lv~~Ag 96 (260)
T 2ae2_A 88 LNILVNNAG 96 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00034 Score=60.45 Aligned_cols=80 Identities=16% Similarity=0.261 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+.. .+++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999899999999999987765543233 432 1245555423333333221 2469
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|++.|
T Consensus 101 D~lv~~Ag 108 (277)
T 2rhc_B 101 DVLVNNAG 108 (277)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0003 Score=59.81 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe----eeecCCHHHHHHHHHHHC-CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE----AFNYNDETDLVAALKRCF-PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~----vi~~~~~~~~~~~i~~~~-~g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++... ..|..+.+++...+++.. .+++|++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 46899999999999999999998899999999999887766553554321 235555423333332211 2469999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 90 i~~Ag 94 (254)
T 2wsb_A 90 VNSAG 94 (254)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99987
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00035 Score=59.85 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC--CC-eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG--FD-EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g--~~-~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.+..+...|++|+++++++++.+.+.+++. +. ...|..+.+++.+.+.+... +++|++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999998999999999999887766653443 21 22455554233333332211 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|++.|
T Consensus 91 v~~Ag 95 (263)
T 3ak4_A 91 CANAG 95 (263)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00062 Score=58.99 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC------------hHhHHHHHH---HcCCC---eeeecCCHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS------------SQKVDLLKN---KLGFD---EAFNYNDETDLVA 218 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~ 218 (347)
.|+++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..+.. ..+|..+.+++.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 57899999999999999999999999999999886 444433321 23432 1245555433333
Q ss_pred HHHHHCC--CCccEEEeCCCh---------hhH---------------HHHHHhhhcCCeEEEEccc
Q 019012 219 ALKRCFP--QGIDIYFDNVGG---------EML---------------DAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 219 ~i~~~~~--g~~d~vid~~g~---------~~~---------------~~~~~~l~~~G~~v~~g~~ 259 (347)
.+.+... +.+|+++++.|. +.+ +.++..+.++|+++.++..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 155 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV 155 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence 3333221 369999999873 111 2233345567899988764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00057 Score=61.10 Aligned_cols=80 Identities=26% Similarity=0.408 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-----------HHHHHHHcCCC---eeeecCCHHHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-----------VDLLKNKLGFD---EAFNYNDETDLVAALK 221 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~---~vi~~~~~~~~~~~i~ 221 (347)
-.|+++||+||++++|.+.+..+...|++|++++++.++ .+.++ ..|.. ..+|..+.+++...+.
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence 357899999999999999999888899999999988753 23333 44532 2246666533333333
Q ss_pred HHCC--CCccEEEeCCC
Q 019012 222 RCFP--QGIDIYFDNVG 236 (347)
Q Consensus 222 ~~~~--g~~d~vid~~g 236 (347)
+... +++|++|++.|
T Consensus 122 ~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNAS 138 (346)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 3221 36999999988
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00027 Score=60.97 Aligned_cols=80 Identities=10% Similarity=0.109 Sum_probs=54.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHcCCC--eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKLGFD--EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.++++||+||+ |++|.+.++.+...|++|++++++++ ..+.+.++.+.. ...|..+.+++...+.+.. .+.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999998 99999999999889999999998865 344444233421 2246555423333333321 246
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 85 id~lv~nAg 93 (275)
T 2pd4_A 85 LDFIVHSVA 93 (275)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 999999987
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00025 Score=61.43 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-E--AFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+.+++...+.+... +++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4689999999999999999999999999999999988877766455432 1 2455554233333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 84 v~~Ag 88 (281)
T 3m1a_A 84 VNNAG 88 (281)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00041 Score=58.97 Aligned_cols=100 Identities=13% Similarity=0.169 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
+.++++||+||+|++|.+.++.+...|++|+++++++++.+. ....+|..+.+++...+.+... +.+|+++.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC 93 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346899999999999999999999999999999988764221 1122334443244444444432 37999999
Q ss_pred CCCh--------h----h---------------HHHHHHhhhcCCeEEEEccccc
Q 019012 234 NVGG--------E----M---------------LDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 234 ~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+.|. + . .+.++..++++|+++.++....
T Consensus 94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (251)
T 3orf_A 94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA 148 (251)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence 9882 0 0 1223445566789999886544
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00041 Score=58.72 Aligned_cols=80 Identities=26% Similarity=0.380 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+.+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999889999999999988766554232 432 1245555434444343332 2369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++.+.|
T Consensus 84 d~li~~Ag 91 (247)
T 3lyl_A 84 DILVNNAG 91 (247)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00029 Score=61.71 Aligned_cols=81 Identities=22% Similarity=0.345 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
-.++++||+||+|++|.+.+..+...|++|++++++.++.+.+.+++ +.. ..+|..+.+++.+.+++... +.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 36789999999999999999999999999999999988776654333 332 23465554234333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 109 id~lvnnAg 117 (301)
T 3tjr_A 109 VDVVFSNAG 117 (301)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00033 Score=60.62 Aligned_cols=81 Identities=22% Similarity=0.341 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
..++++||+||++++|.+.+..+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+... +.
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999988889999999999988766554333 332 12465554333333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 102 id~lv~nAg 110 (279)
T 3sju_A 102 IGILVNSAG 110 (279)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 999999987
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00081 Score=58.61 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCCch--HHHHHHHHHHHCCCEEEEEECChHhHHHHH---HHcCCCe--eeecCCHHHHHHHHHHHC--CC
Q 019012 156 KSGEYVFVSAASGA--VGQLVGQLAKLHGCYVVGSAGSSQKVDLLK---NKLGFDE--AFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~--~G~~ai~la~~~G~~V~~~~~~~~~~~~~~---~~~g~~~--vi~~~~~~~~~~~i~~~~--~g 226 (347)
-.++++||+||+|+ +|.+.++.+...|++|++++++++..+.++ ++.+... ..|..+.+++...+++.. .+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 45789999999855 999999999899999999998865433332 1334222 245555433333333321 13
Q ss_pred CccEEEeCCChh------------------------------hHHHHHHhhhcCCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE------------------------------MLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
.+|++|++.|.. ..+.++..+.++|+++.++....
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~ 173 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA 173 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence 699999998721 11234455667899999886544
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0003 Score=59.81 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----C-C-C--eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----G-F-D--EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g-~-~--~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ + . . ...|..+.+++...+.+...
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999888888999999999988776654332 2 1 1 12455554233333333221
Q ss_pred CCccEEEeCCCh
Q 019012 226 QGIDIYFDNVGG 237 (347)
Q Consensus 226 g~~d~vid~~g~ 237 (347)
+.+|+++++.|.
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 369999999883
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00045 Score=60.36 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChHhHHHHH---HHcCCCe--eeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK---NKLGFDE--AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~---~~~g~~~--vi~~~~~~~~~~~i~~~~~--g 226 (347)
-.++++||+||+| ++|.+.++.+...|++|++++++++..+.+. ++.+... ..|..+.+++...+.+... +
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999987 9999999988889999999999875444333 1334322 2455554333333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++++.|
T Consensus 108 ~iD~lVnnAG 117 (296)
T 3k31_A 108 SLDFVVHAVA 117 (296)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00037 Score=60.49 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+... +.+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999899999999999988776665344 221 12455554233333333221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 107 D~lVnnAg 114 (283)
T 3v8b_A 107 DIVVANAG 114 (283)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00037 Score=59.22 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++.+.+.+... +++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI 87 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999988776654333 321 12455554233333332211 369
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|.+.|.
T Consensus 88 d~li~~Ag~ 96 (253)
T 3qiv_A 88 DYLVNNAAI 96 (253)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999873
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00034 Score=61.25 Aligned_cols=93 Identities=20% Similarity=0.245 Sum_probs=71.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
--.|.+++|+|+ |.+|..+++.++..|++|++.+++.++.+.+. ++|.. +++.. ++. +.. ..+|+|+.+
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~~---~l~----~~l-~~aDvVi~~ 222 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHTD---ELK----EHV-KDIDICINT 222 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEGG---GHH----HHS-TTCSEEEEC
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEchh---hHH----HHh-hCCCEEEEC
Confidence 357899999996 99999999999999999999999988877777 67763 33332 322 222 258999999
Q ss_pred CChhh-HHHHHHhhhcCCeEEEEcc
Q 019012 235 VGGEM-LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~~~-~~~~~~~l~~~G~~v~~g~ 258 (347)
+.... -...+..+++++.++.++.
T Consensus 223 ~p~~~i~~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 223 IPSMILNQTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp CSSCCBCHHHHTTSCTTCEEEECSS
T ss_pred CChhhhCHHHHHhCCCCCEEEEEeC
Confidence 98643 2456778899999999875
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00023 Score=60.99 Aligned_cols=80 Identities=23% Similarity=0.299 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---C-CC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---G-FD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g-~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ + .. ...|-.+.+++...+.+... ++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999899999999999988766554333 2 11 12455554233333332221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 89 id~lvnnAg 97 (262)
T 3pk0_A 89 IDVVCANAG 97 (262)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00035 Score=59.72 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||++++|.+.++.+...|++|+++ .+++++.+.+.+ +.+.. ...|-.+.+++...+++... ++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999998999999988 444444333321 23432 12455554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 87 id~lv~nAg 95 (259)
T 3edm_A 87 IHGLVHVAG 95 (259)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 999999886
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00028 Score=60.39 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-e--eeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-E--AFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+.+++.+.+.+... +++|++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 4789999999999999999999999999999999887766655455542 1 2455554233333332211 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|.+.|
T Consensus 91 i~~Ag 95 (265)
T 2o23_A 91 VNCAG 95 (265)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99887
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00063 Score=59.15 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC---YVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~---~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~ 225 (347)
.++++||+||++++|.+.+..+...|+ +|++++++.++.+.+.+++ +.. ...|..+.+++...+++...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 478999999999999998877766676 9999999988776665333 321 12455554345555554432
Q ss_pred --CCccEEEeCCC
Q 019012 226 --QGIDIYFDNVG 236 (347)
Q Consensus 226 --g~~d~vid~~g 236 (347)
+.+|+++++.|
T Consensus 112 ~~g~iD~lVnnAG 124 (287)
T 3rku_A 112 EFKDIDILVNNAG 124 (287)
T ss_dssp GGCSCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 36999999887
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00087 Score=57.13 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.+.++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.++ .+.. ...|..+.+++.+.+.+... ++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999988889999999998 76655544322 2332 12355554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 86 id~li~~Ag 94 (261)
T 1gee_A 86 LDVMINNAG 94 (261)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00017 Score=60.16 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.++++||+||++++|.+.++.+...|++|++++++.+ .|-.+.+++.+.++++ +.+|+++++.|
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg 68 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG 68 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence 4678999999999999999988888999999987643 3334432444444444 46899999887
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00026 Score=61.84 Aligned_cols=80 Identities=19% Similarity=0.286 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC---C----eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---D----EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---~----~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.. . ...|..+.+++.+.+.+... +.
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999998876665534421 1 12455554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 120 iD~lvnnAg 128 (293)
T 3rih_A 120 LDVVCANAG 128 (293)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0004 Score=58.99 Aligned_cols=78 Identities=21% Similarity=0.339 Sum_probs=57.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
+++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. ...|..+.+++...+.+... +++|++++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 36899999999999999999889999999999988777665455432 22466655344445554433 37999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 81 nAg 83 (248)
T 3asu_A 81 NAG 83 (248)
T ss_dssp CCC
T ss_pred CCC
Confidence 887
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00077 Score=56.85 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-CCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-GFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++.+.+. ..+++|++|++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~ 83 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG--SVGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCCEEEEC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH--HcCCCCEEEEC
Confidence 4789999999999999999999999999999999988776655344 322 1245555423333332 12369999999
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 84 Ag 85 (244)
T 3d3w_A 84 AA 85 (244)
T ss_dssp CC
T ss_pred Cc
Confidence 87
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00083 Score=56.61 Aligned_cols=78 Identities=19% Similarity=0.221 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-CCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-GFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
++.++||+||+|++|...++.+...|++|++++++.++.+.+.++. +.. ...|..+.+++.+.++ ..+.+|++|++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~ 83 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG--GIGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH--HcCCCCEEEEC
Confidence 4679999999999999999999889999999999988776655233 332 1245555423333332 12368999999
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 84 Ag 85 (244)
T 1cyd_A 84 AA 85 (244)
T ss_dssp CC
T ss_pred Cc
Confidence 88
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00037 Score=59.71 Aligned_cols=82 Identities=21% Similarity=0.292 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
-.++++||+||+|++|.+.+..+...|++|++++++.++.+.+.+++ +.. ..+|..+.+++...+.+... +.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35789999999999999999988889999999999988766554332 332 22455554233333333211 36
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|++|.+.|.
T Consensus 107 id~lv~~Ag~ 116 (262)
T 3rkr_A 107 CDVLVNNAGV 116 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999874
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0011 Score=50.83 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=66.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee-ecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.++|+|.|+ |.+|...++.++..|.+|+++++++++.+.++ +.|...+. |..++ + .+++..-..+|+++-+++
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~-~---~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAANE-E---IMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSH-H---HHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCH-H---HHHhcCcccCCEEEEECC
Confidence 467999996 99999999999999999999999999999998 78874322 44443 3 233322237999999998
Q ss_pred hhh----HHHHHHhhhcCCeEEEE
Q 019012 237 GEM----LDAALLNMRDHGRIAVC 256 (347)
Q Consensus 237 ~~~----~~~~~~~l~~~G~~v~~ 256 (347)
.+. .-...+.+.+..+++..
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEE
Confidence 642 22344455566666554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00028 Score=62.42 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC--C---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF--D---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~--~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +. . ..+|..+.+++...+.+.. .+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999998889999999999998776654332 32 1 2346555433333333321 14
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 87 ~id~lv~nAg 96 (319)
T 3ioy_A 87 PVSILCNNAG 96 (319)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999988
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00037 Score=59.76 Aligned_cols=81 Identities=14% Similarity=0.235 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
-.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999899999999999988766654333 332 1246565433333333321 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 89 id~lv~nAg 97 (264)
T 3ucx_A 89 VDVVINNAF 97 (264)
T ss_dssp CSEEEECCC
T ss_pred CcEEEECCC
Confidence 999999885
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00037 Score=60.04 Aligned_cols=80 Identities=20% Similarity=0.372 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|.+.+..+...|++|+++++++++.+.+.++ .+.. ..+|..+.+++...+.+... +.+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999998888999999999998876654422 2332 23466554233333333221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 107 D~lvnnAg 114 (270)
T 3ftp_A 107 NVLVNNAG 114 (270)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00039 Score=60.07 Aligned_cols=81 Identities=20% Similarity=0.321 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
-.++++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+... +
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999899999999999987655443232 432 12465554333333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++++.|
T Consensus 105 ~id~lv~nAg 114 (277)
T 4fc7_A 105 RIDILINCAA 114 (277)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6999999988
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00041 Score=59.64 Aligned_cols=80 Identities=14% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHHHcCCC---eeeecCCHHHHHHHHH---HHCC--
Q 019012 157 SGEYVFVSAA--SGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKNKLGFD---EAFNYNDETDLVAALK---RCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga--~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~~~g~~---~vi~~~~~~~~~~~i~---~~~~-- 225 (347)
.++++||+|| +|++|.+.++.+...|++|++++++.++ .+.+.++++.. ...|..+.+++.+.+. +..+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 8999999999998999999999988765 35554355432 2246655423333333 3222
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|++|++.|
T Consensus 86 ~~iD~lv~nAg 96 (269)
T 2h7i_A 86 NKLDGVVHSIG 96 (269)
T ss_dssp CCEEEEEECCC
T ss_pred CCceEEEECCc
Confidence 16999999887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0002 Score=61.32 Aligned_cols=79 Identities=19% Similarity=0.151 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH-HHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vi 232 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++. +.++ +.++. ...|..+.+++.+.+.+.. .+.+|+++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV 104 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 467899999999999999999888999999999987654 3344 55653 2346555433333333321 24699999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
++.|
T Consensus 105 ~nAg 108 (260)
T 3gem_A 105 HNAS 108 (260)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9988
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00033 Score=60.08 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCC----eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFD----EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~----~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.++ .+.. ...|..+.+++...+++... +
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999989999999999998876655423 2222 12455554233333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++++.|
T Consensus 87 ~id~lvnnAg 96 (265)
T 3lf2_A 87 CASILVNNAG 96 (265)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00064 Score=58.07 Aligned_cols=80 Identities=14% Similarity=0.202 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHH---CCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRC---FPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~---~~g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+. ..+.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999899999999999987765544233 431 124555543444444433 1357
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 84 id~lvnnAg 92 (260)
T 2qq5_A 84 LDVLVNNAY 92 (260)
T ss_dssp CCEEEECCC
T ss_pred ceEEEECCc
Confidence 999999984
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00047 Score=59.02 Aligned_cols=80 Identities=16% Similarity=0.303 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ |.. ...|..+.+++...+.+... +++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999999987766544233 332 12455554333333332221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 86 d~lv~nAg 93 (262)
T 1zem_A 86 DFLFNNAG 93 (262)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999886
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00051 Score=57.50 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=56.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+++||+||+|++|.+.+..+...|++|+++++++++.+.+.++++.. ...|..+.+++.+.+.+. ...+|+++++.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-~~~~d~lv~~A 80 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQL-DSIPSTVVHSA 80 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSC-SSCCSEEEECC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHH-hhcCCEEEEeC
Confidence 36899999999999999999999999999999999888776455432 234666552333333332 23459999988
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
|
T Consensus 81 g 81 (230)
T 3guy_A 81 G 81 (230)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0003 Score=60.92 Aligned_cols=80 Identities=19% Similarity=0.307 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC---C---eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF---D---EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +. . ...|..+.+++...+.+...
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999889999999999988766554232 22 1 12455554233333333211
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|++|++.|
T Consensus 85 g~iD~lv~nAg 95 (280)
T 1xkq_A 85 GKIDVLVNNAG 95 (280)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999887
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00062 Score=57.38 Aligned_cols=75 Identities=13% Similarity=0.241 Sum_probs=52.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCH--HHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDE--TDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~--~~~~~~i~~~~~g~~d~vid~ 234 (347)
++++||+||+|++|.+.++.+...|++|++++++.++ ..+ ++++.. ..|..+. +.+.+.+.+.. +++|+++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~-g~id~lv~~ 77 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKDDPKGLVKRALEAL-GGLHVLVHA 77 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTSCHHHHHHHHHHHH-TSCCEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchHHHHHHHHHHHHHc-CCCCEEEEC
Confidence 5789999999999999999998999999999998775 333 556321 2343332 12223333222 369999998
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 78 Ag 79 (239)
T 2ekp_A 78 AA 79 (239)
T ss_dssp CC
T ss_pred CC
Confidence 87
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00048 Score=58.80 Aligned_cols=80 Identities=9% Similarity=0.140 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC----eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD----EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~----~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.|+++||+||+| ++|++.++.+...|++|++++++++..+.+.+ +++.. ..+|-.++++..+.+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 589999999876 89999999999999999999999876665542 23321 12465554333333332221
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
|.+|+++++.|
T Consensus 85 G~iD~lvnnAg 95 (256)
T 4fs3_A 85 GNIDGVYHSIA 95 (256)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEeccc
Confidence 47999999877
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00053 Score=57.51 Aligned_cols=79 Identities=19% Similarity=0.201 Sum_probs=56.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-CC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-FD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
++++||+||+|++|...++.+...|++|++++++.++.+.+.++++ +. ...|..+.+++.+.+.+... +++|++|+
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999999998899999999999887776653443 21 12455554233333332211 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 85 ~Ag 87 (234)
T 2ehd_A 85 NAG 87 (234)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0003 Score=60.92 Aligned_cols=80 Identities=26% Similarity=0.346 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+... +++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999899999999999988777665444 221 12355554233333332211 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 87 D~lvnnAg 94 (280)
T 3tox_A 87 DTAFNNAG 94 (280)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00038 Score=59.37 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++ +.+.++++.. ...|..+.+++...+++.. .+.+|++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 83 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 83 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999999998899999999998876 4443254321 1245555423433333321 136999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 84 ~Ag 86 (256)
T 2d1y_A 84 NAA 86 (256)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00046 Score=58.43 Aligned_cols=80 Identities=24% Similarity=0.360 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++ ++++.+.+.++ .+.. ...|..+.+++.+.+++... ++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999899999999998 76665544322 2432 12455554233333333211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 83 id~lv~nAg 91 (246)
T 2uvd_A 83 VDILVNNAG 91 (246)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00018 Score=61.92 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+. ...+. ...|..+.+++...+.+... +++|++++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4689999999999999999999899999999999877655433 11111 23455554233333333221 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 94 nAg 96 (266)
T 3p19_A 94 NAG 96 (266)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00027 Score=60.34 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.++ .+.. ...|..+.+++...+++... +++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999888888899999999998876655423 2432 12455554233333332221 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 91 d~lv~nAg 98 (256)
T 3gaf_A 91 TVLVNNAG 98 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00055 Score=58.08 Aligned_cols=79 Identities=14% Similarity=0.253 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHH-HHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVD-LLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~-~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
.++++||+||+|++|.+.++.+...|++|+++++++ ++.+ .++ +.+.. ...|..+.+++...+++... +++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999988999999999987 6544 344 55532 12455554233333333211 3699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|++.|
T Consensus 85 ~lv~nAg 91 (249)
T 2ew8_A 85 ILVNNAG 91 (249)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999987
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00035 Score=60.35 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--C-e--eeecCCHHHHHHHHHHHC--CCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--D-E--AFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~-~--vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++.. . . ..|..+.+++...+++.. .+++|
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 478999999999999999999989999999999998776655434421 1 1 235555423333333221 24699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|++.|
T Consensus 108 ~lvnnAg 114 (276)
T 2b4q_A 108 ILVNNAG 114 (276)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999987
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00038 Score=60.10 Aligned_cols=80 Identities=14% Similarity=0.285 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC---C---eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF---D---EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +. . ...|..+.+++...+.+...
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999988889999999999988776654344 21 1 12455554233333332211
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+++|++|++.|
T Consensus 85 g~id~lv~~Ag 95 (278)
T 1spx_A 85 GKLDILVNNAG 95 (278)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999987
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00024 Score=60.63 Aligned_cols=105 Identities=12% Similarity=0.145 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH--HcCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--KLGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+++ +.+.. ..+|..++++..+.+.+... |.+|
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD 85 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD 85 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999988999999999988765443321 33432 23466655333333333222 4699
Q ss_pred EEEeCCCh----------hhH---------------HHHHHhhh-cCCeEEEEccccc
Q 019012 230 IYFDNVGG----------EML---------------DAALLNMR-DHGRIAVCGMVSL 261 (347)
Q Consensus 230 ~vid~~g~----------~~~---------------~~~~~~l~-~~G~~v~~g~~~~ 261 (347)
+++++.|. +.+ +.++..|+ .+|++|.++....
T Consensus 86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~ 143 (258)
T 4gkb_A 86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA 143 (258)
T ss_dssp EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence 99999873 111 33445554 4799999986544
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0002 Score=61.60 Aligned_cols=80 Identities=19% Similarity=0.347 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||++++|.+.++.+...|++|++++++.++.+.+.++ .+.. ...|..+.+++...+++... ++
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999998876654423 3432 12354443233333332221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 99 id~lv~nAg 107 (266)
T 4egf_A 99 LDVLVNNAG 107 (266)
T ss_dssp CSEEEEECC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00035 Score=61.09 Aligned_cols=80 Identities=18% Similarity=0.314 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC---C---eeeecCCHHHHHHHHHHHC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF---D---EAFNYNDETDLVAALKRCF--P 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~---~---~vi~~~~~~~~~~~i~~~~--~ 225 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +. . ...|..+.+++...+.+.. .
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999889999999999988765543232 32 1 1245555423333333221 1
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+++|++|++.|
T Consensus 105 g~iD~lvnnAG 115 (297)
T 1xhl_A 105 GKIDILVNNAG 115 (297)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999887
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00016 Score=60.83 Aligned_cols=97 Identities=16% Similarity=0.130 Sum_probs=65.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
..+|||+||+|.+|.+.++.+...| ++|+++++++++.+.+. ..++. ...|..+.+++.+.++ ++|+||.+.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a 96 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQ-----GQDIVYANL 96 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHT-----TCSEEEEEC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhc-----CCCEEEEcC
Confidence 3689999999999999999999999 79999999887644322 22221 1235555423333332 589999988
Q ss_pred Chh----hHHHHHHhhhcC--CeEEEEcccc
Q 019012 236 GGE----MLDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 236 g~~----~~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
+.. ..+.+++.++.. +++|.++...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence 863 234556666553 6899887643
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00066 Score=57.24 Aligned_cols=79 Identities=15% Similarity=0.195 Sum_probs=53.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHHH---cCCC----eeeecCCHHHHHHHHHHHC--CCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKNK---LGFD----EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~~---~g~~----~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++++||+||+|++|...++.+...|++|+++ +++.++.+.+.++ .+.. ...|..+.+++.+.+.+.. .++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999998899999998 7777765544322 2332 1235555423333333221 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 81 ~d~li~~Ag 89 (245)
T 2ph3_A 81 LDTLVNNAG 89 (245)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00064 Score=58.50 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.+..+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+.. .+++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999999999999999999889999999999987766543232 432 1245555423333333221 1369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 110 D~li~~Ag 117 (272)
T 1yb1_A 110 SILVNNAG 117 (272)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99999987
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00066 Score=57.83 Aligned_cols=80 Identities=13% Similarity=0.154 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++ .+.. ...|..+.+++.+.+++... +++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999988999999999988765544322 2432 12455554234333333211 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 92 d~vi~~Ag 99 (260)
T 3awd_A 92 DILVACAG 99 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00039 Score=59.76 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
..++++||+||++++|.+.++.+...|++|+++++ ++++.+.+.+ ..+.. ...|..+.+++...+.+... +
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999998888888999988754 4444443331 33432 12455554233333333221 3
Q ss_pred CccEEEeCCChh-----------h---------------HHHHHHhhhcCCeEEEEccc
Q 019012 227 GIDIYFDNVGGE-----------M---------------LDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 227 ~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~ 259 (347)
++|+++++.|.. . .+.++..++++|+++.++..
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 163 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS 163 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence 699999998721 1 12344556668999998754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00059 Score=58.30 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.++ .+.. ...|..+.+++...+.+.. .+++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999988999999999998766544322 2432 1245555423333333221 1369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|++.|
T Consensus 93 D~lv~~Ag 100 (260)
T 2zat_A 93 DILVSNAA 100 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.001 Score=55.76 Aligned_cols=78 Identities=14% Similarity=0.257 Sum_probs=55.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCCe---eeecCCHHHHHHHH---HHHCCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFDE---AFNYNDETDLVAAL---KRCFPQG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~~---vi~~~~~~~~~~~i---~~~~~g~ 227 (347)
++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++ .+... ..|..+.+++.+.+ .+.. +.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-GD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-SS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-CC
Confidence 67899999999999999999999999999999998876655423 23321 23555542333222 2222 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++.+.|
T Consensus 81 id~li~~Ag 89 (235)
T 3l77_A 81 VDVVVANAG 89 (235)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999999987
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0015 Score=52.49 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=65.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeee-ecCCHHHHHHHHHHHCC-CCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAF-NYNDETDLVAALKRCFP-QGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~-g~~d~vid~ 234 (347)
+++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.++ +.|...+. |..+. + .+.+.++ .++|++|.+
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~-~---~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP-D---FWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH-H---HHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH-H---HHHhccCCCCCCEEEEe
Confidence 568999995 99999999999998 999999999999998888 78875332 44443 2 2344312 379999999
Q ss_pred CChh-hHHHHHHh---hhcCCeEEEE
Q 019012 235 VGGE-MLDAALLN---MRDHGRIAVC 256 (347)
Q Consensus 235 ~g~~-~~~~~~~~---l~~~G~~v~~ 256 (347)
++.+ ....+... +.+..+++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 113 MPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 9864 22333333 3444566553
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.001 Score=56.63 Aligned_cols=79 Identities=18% Similarity=0.291 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHcCCC-e--eeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKLGFD-E--AFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++ .+.++ +.+.. . ..|..+.+++...+.+... +++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999999999998899999999987651 12232 23432 1 2355554233333332211 3699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|++.|
T Consensus 82 ~lv~~Ag 88 (255)
T 2q2v_A 82 ILVNNAG 88 (255)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999987
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00033 Score=59.63 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=61.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+++||+||+|++|.++++.+...|++|+++++++++.+ . ....|..+.+++.+.++++ .+.+|++|++.|..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~---~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----A---DLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLG 73 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----c---ccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCC
Confidence 47999999999999999999889999999998765321 1 1112222211222223322 24689999998732
Q ss_pred h-------------------HHHHHHhhhc--CCeEEEEccccc
Q 019012 239 M-------------------LDAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 239 ~-------------------~~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
. .+.++..+.+ .|+++.++....
T Consensus 74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 1 2334555544 389999887544
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00061 Score=57.69 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=55.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
++++||+||+|++|.+.+..+...|++|++++++.++.+.+.+++ +.. ...|..+.+++.+.+.+... +++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999889999999999988766654333 221 12455554233333332211 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 82 d~li~~Ag 89 (250)
T 2cfc_A 82 DVLVNNAG 89 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999886
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00036 Score=60.15 Aligned_cols=80 Identities=21% Similarity=0.400 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCCe---eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE---AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.|+++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ |... ..|..+.+++.+.+.+.. .+++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV 104 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999999999999999999899999999999988766554333 4321 235555423333333221 2369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 105 D~lv~nAg 112 (271)
T 4ibo_A 105 DILVNNAG 112 (271)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0011 Score=56.83 Aligned_cols=80 Identities=14% Similarity=0.221 Sum_probs=55.6
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECCh---HhHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSS---QKVDLLKNKLGFDE--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~---~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+ |++|.+.++.+...|++|+++++++ +..+.+.++.+... ..|..+.+++.+.+++... ++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999998 8999999999988999999999876 33344432334322 2466655344444444332 37
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 88 iD~lv~~Ag 96 (265)
T 1qsg_A 88 FDGFVHSIG 96 (265)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00087 Score=57.16 Aligned_cols=80 Identities=20% Similarity=0.293 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHH--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKL---HGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRC-- 223 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~---~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~-- 223 (347)
.++++||+||+|++|.+.++.+.. .|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 467899999999999998887776 8999999999988766554333 321 124655543444444443
Q ss_pred --CCCCcc--EEEeCCC
Q 019012 224 --FPQGID--IYFDNVG 236 (347)
Q Consensus 224 --~~g~~d--~vid~~g 236 (347)
..+.+| +++++.|
T Consensus 85 ~~~~g~~d~~~lvnnAg 101 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAA 101 (259)
T ss_dssp SCCCTTCCEEEEEECCC
T ss_pred ccccccCCccEEEECCc
Confidence 224677 9999876
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00042 Score=59.24 Aligned_cols=80 Identities=15% Similarity=0.268 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-HHHHHHHc----CCC-e--eeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-VDLLKNKL----GFD-E--AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~~~~~~~~----g~~-~--vi~~~~~~~~~~~i~~~~~--g 226 (347)
+++++||+||+|++|.+.++.+...|++|+++++++++ .+.+.+++ +.. . ..|..+.+++...+.+... +
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999998899999999988766 55443232 432 1 2355554233333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|++|++.|
T Consensus 83 ~iD~lv~~Ag 92 (260)
T 1x1t_A 83 RIDILVNNAG 92 (260)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0012 Score=55.66 Aligned_cols=79 Identities=24% Similarity=0.321 Sum_probs=53.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
|+++||+||+|++|...++.+...|++|+++ .+++++.+.+.++ .+.. ...|..+.+++.+.+.+.. .+++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999985 7777665544322 2431 1245555423433333321 2369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 81 d~li~~Ag 88 (244)
T 1edo_A 81 DVVVNNAG 88 (244)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00088 Score=57.68 Aligned_cols=80 Identities=19% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----C-eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----D-EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++. . ...|..+.+++...+.+... +++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999888999999999988766555434432 1 12455554233333332211 3699
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++|++.|
T Consensus 95 ~li~~Ag 101 (278)
T 2bgk_A 95 IMFGNVG 101 (278)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999887
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0011 Score=55.94 Aligned_cols=81 Identities=20% Similarity=0.278 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.+.++||+||+|++|...++.+...|++|+++ .+++++.+.+.+ ..+.. ...|..+.+++.+.+++... ++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46799999999999999999998999999998 455544443321 23432 12455554233333332211 36
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|++|.+.|.
T Consensus 84 ~d~vi~~Ag~ 93 (247)
T 2hq1_A 84 IDILVNNAGI 93 (247)
T ss_dssp CCEEEECC--
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00099 Score=57.47 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHH---HHHHHHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDET---DLVAALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~---~~~~~i~~~~~g~ 227 (347)
.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+ .+.+.+.+. +.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence 5789999999999999999999899999999999887655544232 432 123444331 233444444 57
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 110 iD~lvnnAg 118 (275)
T 4imr_A 110 VDILVINAS 118 (275)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0011 Score=56.93 Aligned_cols=78 Identities=14% Similarity=0.297 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHCCCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.++++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+.+.+++ . +.+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-Y-PKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-C-CCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-c-CCC
Confidence 5789999999999999999998899999999999987665543232 221 12355554233333333 2 469
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 87 d~lv~nAg 94 (267)
T 3t4x_A 87 DILINNLG 94 (267)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00059 Score=58.47 Aligned_cols=81 Identities=23% Similarity=0.343 Sum_probs=56.6
Q ss_pred CCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---C-CC---eeeecCCHHHHHHHHHHHCC--
Q 019012 156 KSGEYVFVSAASG-AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---G-FD---EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g-~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g-~~---~vi~~~~~~~~~~~i~~~~~-- 225 (347)
-.++++||+||+| ++|.+.+..+...|++|++++++.++.+.+.+++ + .. ...|..+.+++...+++...
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 3578999999986 8999999988889999999999988766654343 2 11 22455554333333333221
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|++|.+.|
T Consensus 100 g~id~li~~Ag 110 (266)
T 3o38_A 100 GRLDVLVNNAG 110 (266)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 36999999988
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00059 Score=58.81 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHHc----CCC-e--eeecCCH----HHHHHHHHHHC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNKL----GFD-E--AFNYNDE----TDLVAALKRCF 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~~----g~~-~--vi~~~~~----~~~~~~i~~~~ 224 (347)
.++++||+||+|++|.+.+..+...|++|+++++ ++++.+.+.+++ +.. . ..|..+. +++...+.+..
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4679999999999999999999889999999999 877665544233 432 1 2344432 24433333221
Q ss_pred C--CCccEEEeCCC
Q 019012 225 P--QGIDIYFDNVG 236 (347)
Q Consensus 225 ~--g~~d~vid~~g 236 (347)
. +++|++|++.|
T Consensus 90 ~~~g~id~lv~nAg 103 (276)
T 1mxh_A 90 RAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1 36999999987
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0023 Score=48.97 Aligned_cols=75 Identities=20% Similarity=0.193 Sum_probs=57.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
..+++|.|+ |.+|...++.+...|.+|+++++++++.+.++ +.|...+ .|..++ + .+++..-.++|++|.+++
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~-~---~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDE-S---FYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCH-H---HHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCH-H---HHHhCCcccCCEEEEecC
Confidence 457999997 99999999999999999999999999988888 6676322 244443 2 344432237999999999
Q ss_pred hh
Q 019012 237 GE 238 (347)
Q Consensus 237 ~~ 238 (347)
.+
T Consensus 80 ~~ 81 (141)
T 3llv_A 80 DD 81 (141)
T ss_dssp CH
T ss_pred CH
Confidence 64
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00015 Score=61.15 Aligned_cols=100 Identities=18% Similarity=0.152 Sum_probs=63.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH---HHHHHHCC-CCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV---AALKRCFP-QGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~i~~~~~-g~~d~vid 233 (347)
++++||+||+|++|.+.++.+...|++|+++++++++.+ . .. .....|..+.+++. +.+.+..+ +++|++++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~-~~-~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--D-SN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--S-EE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--c-cc-EEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 578999999999999999999999999999998866421 0 10 00112333321222 23333332 47999999
Q ss_pred CCCh--------h----h---------------HHHHHHhhhcCCeEEEEccccc
Q 019012 234 NVGG--------E----M---------------LDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 234 ~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+.|. + . .+.++..+.++|+++.++....
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 133 (236)
T 1ooe_A 79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA 133 (236)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9882 1 0 1233444556789999876544
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0013 Score=57.31 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHH---HcCCCe---eeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKN---KLGFDE---AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--g 226 (347)
.++++||+||++++|.+.+..+...|++|++++++. ++.+.+.+ +.|... ..|..+.+++...+.+... +
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999988762 22332221 344321 2355554233333332221 3
Q ss_pred CccEEEeCCChh------------hH---------------HHHHHhhhcCCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE------------ML---------------DAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~------------~~---------------~~~~~~l~~~G~~v~~g~~~~ 261 (347)
++|+++++.|.. .+ +.++..+.++|+++.++....
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~ 189 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence 699999988731 01 223344566899999987544
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0009 Score=58.44 Aligned_cols=80 Identities=13% Similarity=0.192 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.+.++||+||+|++|.+.+..+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+.. .+.
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999889999999999987765544232 432 1245555423333333321 246
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 105 id~li~~Ag 113 (302)
T 1w6u_A 105 PNIVINNAA 113 (302)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899999987
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00099 Score=56.54 Aligned_cols=75 Identities=20% Similarity=0.331 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
.++++||+||+|++|.+.++.+...|++|++++++.+. + +.++. ...|..+.+++.+.+++.. .+++|++|+
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999999999999999999987652 2 34432 2245555433443333322 246999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 81 ~Ag 83 (250)
T 2fwm_X 81 AAG 83 (250)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0024 Score=55.45 Aligned_cols=76 Identities=20% Similarity=0.213 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC-eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD-EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
-+++++||+||+|++|.+++..+...|++|++++++.++.+.+.+++ ++. ...|..+. + .+.+... .+|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~-~~Dv 191 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-A---SRAEAVK-GAHF 191 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-H---HHHHHTT-TCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-H---HHHHHHH-hCCE
Confidence 36789999999999999999999999999999999987766554233 322 23465553 2 2333222 3899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
+++++|
T Consensus 192 lVn~ag 197 (287)
T 1lu9_A 192 VFTAGA 197 (287)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999997
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.001 Score=55.21 Aligned_cols=92 Identities=13% Similarity=0.001 Sum_probs=64.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+|||+||+|.+|...+..+...|.+|+++++++++.+.+. ..++.. ..|..+. +. ..+ +++|+||.+.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE----ADL--DSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH----HHH--TTCSEEEECCCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH----hhc--ccCCEEEECCccC
Confidence 5999999999999999999889999999999988776554 334432 2344433 22 222 3599999999751
Q ss_pred -----------hHHHHHHhhhc-CCeEEEEccc
Q 019012 239 -----------MLDAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 239 -----------~~~~~~~~l~~-~G~~v~~g~~ 259 (347)
.....++.+++ +++++.++..
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 23445555544 5788888653
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00075 Score=58.14 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=57.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----C-eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----D-EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
+++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++.. . ...|..+.+++...+.+... +.+|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 7899999999999999999989999999999998877766534432 1 12465555344444444322 368999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
|++.|
T Consensus 102 vnnAG 106 (272)
T 2nwq_A 102 INNAG 106 (272)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00076 Score=61.37 Aligned_cols=100 Identities=16% Similarity=0.220 Sum_probs=73.2
Q ss_pred HHHHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 145 AYAGFHEVC-SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 145 a~~al~~~~-~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.+.++.+.. ..-.|.+|.|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|... . ++.+.++
T Consensus 197 lldgi~ratg~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~-~------sL~eal~-- 265 (436)
T 3h9u_A 197 LVDGIKRATDVMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQV-L------LVEDVVE-- 265 (436)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHTT--
T ss_pred HHHHHHHhcCCcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCee-c------CHHHHHh--
Confidence 344443332 3357899999995 99999999999999999999999887766666 667632 1 2222232
Q ss_pred CCCCccEEEeCCChh-hH-HHHHHhhhcCCeEEEEcc
Q 019012 224 FPQGIDIYFDNVGGE-ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 224 ~~g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~ 258 (347)
..|+++.+.+.. .+ ...+..|+++..++.++.
T Consensus 266 ---~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 266 ---EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp ---TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred ---hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence 489999988753 33 367788999999998875
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00028 Score=59.91 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC--CCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF--PQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~g~~d~vid~ 234 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+.+. + ...|..+.+++.+.+.+.. .+.+|+++++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999999999999999999889999999998765433211 1 2345555423333333221 1368999998
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 89 Ag 90 (247)
T 1uzm_A 89 AG 90 (247)
T ss_dssp CS
T ss_pred CC
Confidence 87
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00084 Score=56.68 Aligned_cols=80 Identities=20% Similarity=0.408 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCC-e--eeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFD-E--AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~-~--vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
+++++||+||+|++|...++.+...|++|++++++.++.+.+.++ .+.. . ..|..+.+++.+.+++.. .++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999888999999999998776554422 3432 1 235555423333333221 136
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 86 ~d~vi~~Ag 94 (248)
T 2pnf_A 86 IDILVNNAG 94 (248)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00023 Score=60.16 Aligned_cols=77 Identities=14% Similarity=0.089 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH---HHHHHHCC-CCccEE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV---AALKRCFP-QGIDIY 231 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~i~~~~~-g~~d~v 231 (347)
..++++||+||+|++|.+.++.+...|++|+++++++++.+ . .. .....|..+.+++. +.+.+..+ +++|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~-~~-~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--S-AS-VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--S-EE-EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--C-Cc-EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 45789999999999999999999889999999998865421 0 10 00113433332232 23333332 479999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 81 v~~Ag 85 (241)
T 1dhr_A 81 LCVAG 85 (241)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 99987
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00082 Score=58.10 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-------------ChHhHHHHHHH---cCCC---eeeecCCHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-------------SSQKVDLLKNK---LGFD---EAFNYNDETDL 216 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-------------~~~~~~~~~~~---~g~~---~vi~~~~~~~~ 216 (347)
-.|+++||+||++++|.+.++.+...|++|+++++ ++++.+.+.+. .|.. ...|..+.+++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 45789999999999999999999999999999987 45555444322 3332 22465554333
Q ss_pred HHHHHHHCC--CCccEEEeCCC
Q 019012 217 VAALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 217 ~~~i~~~~~--g~~d~vid~~g 236 (347)
.+.+.+... +.+|+++++.|
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 333333211 36999999987
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00075 Score=57.57 Aligned_cols=79 Identities=13% Similarity=0.235 Sum_probs=53.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
++++||+||+|++|.+.++.+...|++|++++++.++ .+.+.+++ +.. ...|..+.+++...+.+... ++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999988888889999999988766 44433232 322 12455554233333332211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 82 iD~lv~nAg 90 (258)
T 3a28_C 82 FDVLVNNAG 90 (258)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0004 Score=58.68 Aligned_cols=75 Identities=28% Similarity=0.422 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHC-CCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKNKLGFDE---AFNYNDETDLVAALKRCF-PQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~-~g~~d~ 230 (347)
.|+++||+||++++|++.++.+...|++|++++++. +..+.++ +.|... ..|..++ . .+++.. .+++|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence 589999999999999999999999999999999874 3345556 666532 2344433 1 122222 247999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++++.|
T Consensus 83 LVNNAG 88 (247)
T 4hp8_A 83 LVNNAG 88 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999988
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0013 Score=55.60 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC--Cee--eec--CCHHHHHHHHHHHCC-
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF--DEA--FNY--NDETDLVAALKRCFP- 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~--~~v--i~~--~~~~~~~~~i~~~~~- 225 (347)
-.++++||+||+|++|.+.+..+...|++|+++++++++.+.+.+++ +. ..+ +|. .+.+++...+.+...
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999988776654332 21 122 233 333233333332211
Q ss_pred -CCccEEEeCCC
Q 019012 226 -QGIDIYFDNVG 236 (347)
Q Consensus 226 -g~~d~vid~~g 236 (347)
+.+|+++.+.|
T Consensus 92 ~g~id~lv~nAg 103 (247)
T 3i1j_A 92 FGRLDGLLHNAS 103 (247)
T ss_dssp HSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 36999999887
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0011 Score=57.58 Aligned_cols=79 Identities=24% Similarity=0.217 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCe----eeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDE----AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~----vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
++.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++ .+... ..|..+.+++...+.+.. .++
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999988999999999998876654422 24321 245555423333333221 136
Q ss_pred ccEEEeCC
Q 019012 228 IDIYFDNV 235 (347)
Q Consensus 228 ~d~vid~~ 235 (347)
+|++|.+.
T Consensus 107 iD~li~na 114 (286)
T 1xu9_A 107 LDMLILNH 114 (286)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99999883
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00071 Score=57.51 Aligned_cols=81 Identities=21% Similarity=0.296 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.+.++||+||+|++|...+..+...|++|++++++ .++.+.+.+++ +.. ...|..+.+++...+.+... ++
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999988899999999998 66554443222 331 12455554234333333221 36
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|++|.+.|.
T Consensus 86 id~vi~~Ag~ 95 (258)
T 3afn_B 86 IDVLINNAGG 95 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998873
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00073 Score=57.71 Aligned_cols=80 Identities=16% Similarity=0.219 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++ .+++++.+.+.++ .+.. ...|..+.+++.+.+++... +.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999887 7777665554423 2332 12455554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 83 id~lv~nAg 91 (258)
T 3oid_A 83 LDVFVNNAA 91 (258)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0011 Score=57.91 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--------CCC---eeeecCCHHHHHHHHHHHCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--------GFD---EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--------g~~---~vi~~~~~~~~~~~i~~~~~ 225 (347)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+.+++...+.+...
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999889999999999987765544232 221 12455554233333333211
Q ss_pred --CCccEEEeCCC
Q 019012 226 --QGIDIYFDNVG 236 (347)
Q Consensus 226 --g~~d~vid~~g 236 (347)
+.+|++|.+.|
T Consensus 97 ~~g~id~li~~Ag 109 (303)
T 1yxm_A 97 TFGKINFLVNNGG 109 (303)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 36999999987
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00086 Score=56.89 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-e--eeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-E--AFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.+.++||+||+|++|...++.+...|++|+++++++++.+.+.++ .+.. . ..|..+.+++.+.+++.. .+++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999888999999999998766544323 2332 1 245555423333333221 1369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 90 d~vi~~Ag 97 (255)
T 1fmc_A 90 DILVNNAG 97 (255)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00091 Score=55.28 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=63.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+|||+||+|.+|...++.+...|.+|+++++++++.+.+. .++.. ..|..+. +. +.+ +++|+||.+.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL----SDL--SDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH----HHH--TTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh----hhh--cCCCEEEECCcCC
Confidence 5999999999999999999999999999999987765442 23321 2344432 22 222 3599999999842
Q ss_pred ---------hHHHHHHhhhcC--CeEEEEccc
Q 019012 239 ---------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 239 ---------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
.....++.+++. ++++.++..
T Consensus 73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred ccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 235666667654 688888654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.001 Score=56.74 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---C---------CC-eeeecCCHHHHHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---G---------FD-EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g---------~~-~vi~~~~~~~~~~~i~~~ 223 (347)
.++++||+||+|++|...+..+...|++|++++++.++.+.+.+++ + +. ...|..+.+++.+.+++.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 4679999999999999999988889999999999988766654233 1 11 123555542333333332
Q ss_pred C--CCCc-cEEEeCCC
Q 019012 224 F--PQGI-DIYFDNVG 236 (347)
Q Consensus 224 ~--~g~~-d~vid~~g 236 (347)
. .+.+ |++|.+.|
T Consensus 86 ~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHSSCCSEEEECCC
T ss_pred HHHhCCCCeEEEECCC
Confidence 1 1356 99999987
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0023 Score=55.13 Aligned_cols=102 Identities=19% Similarity=0.143 Sum_probs=70.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHc----C--CCeeeecCCHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKL----G--FDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~----g--~~~vi~~~~~~~~~~~i~~ 222 (347)
....+.++++||-.|+ | .|..++.+++.. +.+|++++.+++..+.+++.+ | ...+ ..... ++.+. .
T Consensus 93 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~-d~~~~--~ 166 (280)
T 1i9g_A 93 HEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVS-DLADS--E 166 (280)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECS-CGGGC--C
T ss_pred HHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEEC-chHhc--C
Confidence 5567899999999995 5 788888999875 469999999998888777332 4 2221 11111 11110 0
Q ss_pred HCCCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 223 CFPQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 223 ~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+..+.||+|+..... ..+..+.+.|+++|+++.+..
T Consensus 167 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 112379999876553 578999999999999988754
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00071 Score=58.70 Aligned_cols=79 Identities=23% Similarity=0.324 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-----------HHHHHHHcCCC---eeeecCCHHHHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-----------VDLLKNKLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-----------~~~~~~~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
.++++||+||++++|.+.++.+...|++|++++++.++ .+.++ ..+.. ...|..+.+++.+.+.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence 47899999999999999999998899999999998752 22233 34432 12365554333333333
Q ss_pred HCC--CCccEEEeCCC
Q 019012 223 CFP--QGIDIYFDNVG 236 (347)
Q Consensus 223 ~~~--g~~d~vid~~g 236 (347)
... +.+|++|++.|
T Consensus 87 ~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 87 TVEQFGGIDICVNNAS 102 (285)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 221 36999999988
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00093 Score=56.52 Aligned_cols=77 Identities=17% Similarity=0.334 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-CC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-FD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+. ++. +. ...|..+.+++. .+.+.. +++|+++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~-~~id~lv~~ 81 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQID-QFANEV-ERLDVLFNV 81 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHH-HHHHHC-SCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHH-HHHHHh-CCCCEEEEC
Confidence 4789999999999999999999899999999999887665544 332 21 224655542333 333322 369999999
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 82 Ag 83 (246)
T 2ag5_A 82 AG 83 (246)
T ss_dssp CC
T ss_pred Cc
Confidence 87
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00063 Score=57.52 Aligned_cols=77 Identities=19% Similarity=0.105 Sum_probs=54.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-E--CChHhHHHHHHHc-CCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-A--GSSQKVDLLKNKL-GFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~--~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
++++||+||+|++|.+.++.+...|++|+++ + +++++.+.+.+++ +. .+.|...-+.+.+.+.+.. +.+|++|+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 4689999999999999999999999999999 5 8888777665455 32 2334433223334443332 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 79 ~Ag 81 (244)
T 1zmo_A 79 NDY 81 (244)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00094 Score=57.90 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC----------------hHhHHHHHHH---cCCC---eeeecCCHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS----------------SQKVDLLKNK---LGFD---EAFNYNDET 214 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~----------------~~~~~~~~~~---~g~~---~vi~~~~~~ 214 (347)
.++++||+||++++|.+.++.+...|++|++++++ .++.+.+.+. .+.. ..+|..+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 57899999999999999999999999999999876 4444443322 2332 124655543
Q ss_pred HHHHHHHHHCC--CCccEEEeCCC
Q 019012 215 DLVAALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 215 ~~~~~i~~~~~--g~~d~vid~~g 236 (347)
++.+.+++... +.+|+++++.|
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCc
Confidence 34333333221 36999999987
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0011 Score=56.80 Aligned_cols=80 Identities=16% Similarity=0.263 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHH---HHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAAL---KRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i---~~~~~g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++.+.+ .+..+++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999889999999999887665543222 332 123555442333333 2223246
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 93 id~li~~Ag 101 (266)
T 1xq1_A 93 LDILINNLG 101 (266)
T ss_dssp CSEEEEECC
T ss_pred CcEEEECCC
Confidence 999999887
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00061 Score=58.02 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=53.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH--HcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN--KLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~--~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+++||+||+|++|.+.++.+...|++|+++++++++.+.+.+ ..+.. ..+|..+-+.+.+.+.+.. +++|+++++.
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lv~nA 80 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND 80 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCEEEECC
Confidence 479999999999999999999999999999998876655431 22432 2234333223334443332 3699999987
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
|
T Consensus 81 g 81 (254)
T 1zmt_A 81 I 81 (254)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.001 Score=57.64 Aligned_cols=80 Identities=10% Similarity=0.215 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHHc----CCC---eeeecCCHHHHHHHHHHHC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNKL----GFD---EAFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~~----g~~---~vi~~~~~~~~~~~i~~~~--~g 226 (347)
.++++||+||++++|.+.++.+...|++|+++++ +.++.+.+.+++ +.. ...|..+.+++...+.+.. .+
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 4689999999999999999999999999999998 445444433232 221 1235555423333333321 13
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|+++++.|
T Consensus 104 ~iD~lv~nAg 113 (281)
T 3v2h_A 104 GADILVNNAG 113 (281)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0013 Score=56.91 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC------------hHhHHHHHH---HcCCCe---eeecCCHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS------------SQKVDLLKN---KLGFDE---AFNYNDETDLVA 218 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~ 218 (347)
.++++||+||++++|.+.++.+...|++|++++++ .++.+...+ ..+... ..|..+.+++.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 57899999999999999999999999999999986 333333221 334321 245555423333
Q ss_pred HHHHHCC--CCccEEEeCCC
Q 019012 219 ALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 219 ~i~~~~~--g~~d~vid~~g 236 (347)
.+++... +++|+++++.|
T Consensus 89 ~~~~~~~~~g~id~lv~nAg 108 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAG 108 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCC
Confidence 3333211 36999999987
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.001 Score=57.01 Aligned_cols=74 Identities=18% Similarity=0.288 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
.++++||+||+|++|.+.++.+...|++|+++++++++ ...+. ...|..+.+++...+.+... +++|++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999999999999999999987654 11111 22455554233333333221 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 81 ~Ag 83 (264)
T 2dtx_A 81 NAG 83 (264)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00094 Score=57.88 Aligned_cols=80 Identities=14% Similarity=0.344 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++++||+||+|++|.+.++.+...|++|+++.+++++.+.+.+++ +.. ...|..+.+++.+.+.+.. .+++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999988888999999988877665543232 432 1245555423433333321 2369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 123 d~li~~Ag 130 (285)
T 2c07_A 123 DILVNNAG 130 (285)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0013 Score=57.37 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC------------hHhHHHHHH---HcCCC---eeeecCCHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS------------SQKVDLLKN---KLGFD---EAFNYNDETDLV 217 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~ 217 (347)
-.|+++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..|.. ..+|..+.+++.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 357899999999999999999998999999999876 444433321 33432 124655543333
Q ss_pred HHHHHHCC--CCccEEEeCCC
Q 019012 218 AALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 218 ~~i~~~~~--g~~d~vid~~g 236 (347)
..+.+... +.+|++|++.|
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEECCC
Confidence 33333221 36999999887
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00055 Score=59.33 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=65.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|||+||+|.+|...++.+... |.+|++++++.++...+. ..++.. ..|..+. + .+.+... ++|+||.+.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~-~---~l~~~~~-~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ-E---SMVEAFK-GMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH-H---HHHHHTT-TCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH-H---HHHHHHh-CCCEEEEeCCC
Confidence 4899999999999999988887 899999999987655443 344432 2455554 2 2333332 59999999874
Q ss_pred --------hhHHHHHHhhhcC--CeEEEEcccc
Q 019012 238 --------EMLDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 238 --------~~~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
......++.++.. ++++.++...
T Consensus 76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 1234556666554 4888887653
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0014 Score=56.55 Aligned_cols=80 Identities=19% Similarity=0.295 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC------------hHhHHHHHH---HcCCC---eeeecCCHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS------------SQKVDLLKN---KLGFD---EAFNYNDETDLVA 218 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~~ 218 (347)
.|+++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..+.. ...|..+.+++..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 57899999999999999999998999999999976 444433321 33432 1245555433433
Q ss_pred HHHHHCC--CCccEEEeCCC
Q 019012 219 ALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 219 ~i~~~~~--g~~d~vid~~g 236 (347)
.+.+... +.+|++|++.|
T Consensus 92 ~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 3333221 36999999988
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.001 Score=56.97 Aligned_cols=82 Identities=11% Similarity=0.133 Sum_probs=55.7
Q ss_pred CCCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChHhHHHHH---HHcCCC--eeeecCCHHHHHHHHHHHC--C
Q 019012 155 PKSGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK---NKLGFD--EAFNYNDETDLVAALKRCF--P 225 (347)
Q Consensus 155 ~~~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~---~~~g~~--~vi~~~~~~~~~~~i~~~~--~ 225 (347)
..+++++||+||+ +++|.+.++.+...|++|++++++++..+.++ ++.+.. ...|..+.+++...+.+.. .
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4568899999998 99999999998889999999998865433333 133422 2345555423333333321 1
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|++|.+.|
T Consensus 91 g~id~lv~nAg 101 (271)
T 3ek2_A 91 DSLDGLVHSIG 101 (271)
T ss_dssp SCEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999999887
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00078 Score=57.92 Aligned_cols=80 Identities=18% Similarity=0.248 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||++++|.+.++.+...|++|+++++ +.++.+.+.+ ..+.. ...|..+.+++...+.+... +.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR 106 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999899999999888 5544444332 23432 12455554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 107 id~lv~nAg 115 (269)
T 4dmm_A 107 LDVLVNNAG 115 (269)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00089 Score=54.62 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=62.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
.+|||+||+|.+|...++.+...|.+|+++++++++.+... ..++. ...|..+.+++.+.++ ++|+||.+.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-----TCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHc-----CCCEEEECccC
Confidence 68999999999999999999889999999999877543221 11221 1234444323333322 48999999884
Q ss_pred h-----------hHHHHHHhhhc--CCeEEEEcccc
Q 019012 238 E-----------MLDAALLNMRD--HGRIAVCGMVS 260 (347)
Q Consensus 238 ~-----------~~~~~~~~l~~--~G~~v~~g~~~ 260 (347)
. .....++.+.+ -++++.++...
T Consensus 78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~ 113 (206)
T 1hdo_A 78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113 (206)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence 2 13344455544 35888887653
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00046 Score=59.09 Aligned_cols=76 Identities=16% Similarity=0.185 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC--CCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF--PQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~g~~d~vid~ 234 (347)
+|+++||+||++++|++.++.+...|++|+++++++++ .+.+.+ ....|-.++++....+++.. .|++|+++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn 85 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--GLPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHM 85 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--TSCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--CCCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999999999999999999987542 111011 12345555423333333221 2469999998
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 86 AG 87 (261)
T 4h15_A 86 LG 87 (261)
T ss_dssp CC
T ss_pred CC
Confidence 76
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00059 Score=59.28 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHHHc----CCC---eeeecCC----HHHHHHHHHHHC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKNKL----GFD---EAFNYND----ETDLVAALKRCF 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~~~----g~~---~vi~~~~----~~~~~~~i~~~~ 224 (347)
.++++||+||+|++|.+.++.+...|++|++++++. ++.+.+.+++ +.. ...|..+ .+++...+.+..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 468999999999999999998888899999999987 6555443232 321 1245555 423333333221
Q ss_pred --CCCccEEEeCCC
Q 019012 225 --PQGIDIYFDNVG 236 (347)
Q Consensus 225 --~g~~d~vid~~g 236 (347)
.+++|++|++.|
T Consensus 102 ~~~g~iD~lvnnAG 115 (288)
T 2x9g_A 102 RAFGRCDVLVNNAS 115 (288)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 136999999887
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0007 Score=57.65 Aligned_cols=79 Identities=22% Similarity=0.262 Sum_probs=54.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
|+++||+||++++|.+.++.+... |++|+.+++++++.+.+.++++.. ...|..+.+++.+.+.+... +.+|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 578999999999999888766555 579999999998887776455532 12455554233333333221 36999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++++.|
T Consensus 82 lvnnAg 87 (254)
T 3kzv_A 82 LVANAG 87 (254)
T ss_dssp EEEECC
T ss_pred EEECCc
Confidence 999887
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0015 Score=55.87 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=54.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKLGFDE--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+ |++|.+.++.+...|++|++++++++ ..+.+.++.+... ..|..+.+++...+++... ++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999998 89999988888888999999998875 3344432334222 2455554233333333211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 87 iD~lv~~Ag 95 (261)
T 2wyu_A 87 LDYLVHAIA 95 (261)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0011 Score=56.99 Aligned_cols=80 Identities=25% Similarity=0.427 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHH---HcCCC-e--eeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKN---KLGFD-E--AFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|++++++ ++..+.+.+ +.+.. . ..|..+.+++.+.+++... ++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999888899999999984 443333321 33432 1 2355554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 108 id~li~nAg 116 (271)
T 4iin_A 108 LSYLVNNAG 116 (271)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0012 Score=56.66 Aligned_cols=80 Identities=23% Similarity=0.361 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
++.++||+||+|++|...++.+...|++|+++++ +.++.+.+.+ +.+.. ...|..+.+++.+.+++... ++
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999889999999998 6665544332 23432 12455554233333332211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 100 ~d~vi~~Ag 108 (274)
T 1ja9_A 100 LDFVMSNSG 108 (274)
T ss_dssp EEEEECCCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=50.21 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=54.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+++|+|+|+ |.+|...++.+...|.+|+++++++++.+.++ +.+...+ .|..+. +.+.+...+++|+++.+++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~~ 79 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE----NELLSLGIRNFEYVIVAIG 79 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSEEEECCTTCH----HHHHTTTGGGCSEEEECCC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCEEEEeCCCCH----HHHHhcCCCCCCEEEECCC
Confidence 567999997 99999999999999999999999888777666 5555322 233332 2333321236999999998
Q ss_pred hh
Q 019012 237 GE 238 (347)
Q Consensus 237 ~~ 238 (347)
.+
T Consensus 80 ~~ 81 (144)
T 2hmt_A 80 AN 81 (144)
T ss_dssp SC
T ss_pred Cc
Confidence 63
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.001 Score=57.43 Aligned_cols=80 Identities=15% Similarity=0.183 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-------------ChHhHHHHHH---HcCCC---eeeecCCHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-------------SSQKVDLLKN---KLGFD---EAFNYNDETDLV 217 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-------------~~~~~~~~~~---~~g~~---~vi~~~~~~~~~ 217 (347)
.++++||+||++++|.+.++.+...|++|+++++ +.++.+.+.+ ..+.. ...|..+.+++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 5789999999999999999999999999999987 4444443321 23332 124555543343
Q ss_pred HHHHHHCC--CCccEEEeCCC
Q 019012 218 AALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 218 ~~i~~~~~--g~~d~vid~~g 236 (347)
+.+.+... +.+|+++++.|
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 33333221 36999999987
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0016 Score=56.06 Aligned_cols=79 Identities=25% Similarity=0.341 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-------HHH----HHHHcCCC---eeeecCCHHHHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-------VDL----LKNKLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-------~~~----~~~~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
.++++||+||++++|.+.++.+...|++|++++++.++ .+. ++ ..+.. ..+|..+.+++...+++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 47899999999999999999988899999999988643 222 22 33432 23465554333333333
Q ss_pred HCC--CCccEEEeCCC
Q 019012 223 CFP--QGIDIYFDNVG 236 (347)
Q Consensus 223 ~~~--g~~d~vid~~g 236 (347)
... +.+|+++++.|
T Consensus 84 ~~~~~g~iD~lvnnAG 99 (274)
T 3e03_A 84 TVDTFGGIDILVNNAS 99 (274)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 221 36999999988
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0026 Score=52.90 Aligned_cols=102 Identities=13% Similarity=0.118 Sum_probs=69.5
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCC-eeeecCCHHHHHHHHHHHCCC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
.+.+++.+||=+| .+.|..++.+++.+ +.+|++++.+++..+.+++. .|.. .-+..... +..+.+..+..+
T Consensus 52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~ 128 (221)
T 3dr5_A 52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAND 128 (221)
T ss_dssp SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTT
T ss_pred hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCC
Confidence 3444556999998 56899999999987 67999999999887777632 3443 22222222 333333333245
Q ss_pred CccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 227 GIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
.||+||-.... ..++.+.+.|+++|.++.-.
T Consensus 129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 79999854432 36788999999999998744
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0012 Score=55.59 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=54.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-------EEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC-------YVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~-------~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~ 224 (347)
++++||+||+|++|.+.++.+...|+ +|++++++.++.+.+.+++ +.. ...|..+.+++...+.+..
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 56899999999999998888888899 9999999987766554333 321 1235555423333333221
Q ss_pred --CCCccEEEeCCC
Q 019012 225 --PQGIDIYFDNVG 236 (347)
Q Consensus 225 --~g~~d~vid~~g 236 (347)
.+++|++|.+.|
T Consensus 82 ~~~g~id~li~~Ag 95 (244)
T 2bd0_A 82 ERYGHIDCLVNNAG 95 (244)
T ss_dssp HHTSCCSEEEECCC
T ss_pred HhCCCCCEEEEcCC
Confidence 136999999887
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0013 Score=58.13 Aligned_cols=79 Identities=18% Similarity=0.298 Sum_probs=53.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-----hHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC-
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-----SQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP- 225 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-----~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~- 225 (347)
++++||+||+|++|.+.++.+...|++|++++++ .++.+.+.+ ..+.. ..+|..+.+++...+++...
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~ 84 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE 84 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998876 233333321 23432 12455554344444443321
Q ss_pred -CCccEEEeCCC
Q 019012 226 -QGIDIYFDNVG 236 (347)
Q Consensus 226 -g~~d~vid~~g 236 (347)
|++|+++++.|
T Consensus 85 ~g~iD~lVnnAG 96 (324)
T 3u9l_A 85 DGRIDVLIHNAG 96 (324)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 46999999998
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0017 Score=56.19 Aligned_cols=80 Identities=11% Similarity=0.157 Sum_probs=54.3
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHcCCC--eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKLGFD--EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.++++||+||+ |++|.+.++.+...|++|++++++++ ..+.+.+..+.. ...|..+.+++...+.+.. .++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999998 89999999988889999999998874 333343233421 2245555423333333221 146
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|++.|
T Consensus 100 iD~lv~~Ag 108 (285)
T 2p91_A 100 LDIIVHSIA 108 (285)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.001 Score=54.62 Aligned_cols=99 Identities=16% Similarity=0.244 Sum_probs=70.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-e--eeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-E--AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~--vi~~~~~~~~~~~i~~~~ 224 (347)
....+.++++||-+|+ |. |..++.+++. +.+|++++.+++..+.+++. +|.. . ++..+.. + .+..
T Consensus 49 ~~l~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~-~---~~~~-- 119 (204)
T 3njr_A 49 AALAPRRGELLWDIGG-GS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP-A---ALAD-- 119 (204)
T ss_dssp HHHCCCTTCEEEEETC-TT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT-G---GGTT--
T ss_pred HhcCCCCCCEEEEecC-CC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh-h---hccc--
Confidence 4567889999999995 54 8888999988 88999999999988777632 3543 2 2322221 1 1111
Q ss_pred CCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|+...+. ..++.+.+.|+++|+++....
T Consensus 120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence 1269999976543 267889999999999987654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00074 Score=58.80 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLK 199 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~ 199 (347)
.++++||+||++++|.+.++.+...|++|++++ ++.++.+.+.
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~ 51 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 51 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 468999999999999999999999999999999 8887766554
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0032 Score=55.23 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC---hHhHHHHHHHc----CC-CeeeecCCHHHHHHHHHHHCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS---SQKVDLLKNKL----GF-DEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~---~~~~~~~~~~~----g~-~~vi~~~~~~~~~~~i~~~~~g 226 (347)
-.++++||+|+ |++|.+++..+...|+ +|+++.++ .++.+.+.+++ +. ..+++..+.+++.+.+.
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~----- 225 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA----- 225 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence 36889999997 9999999999999999 99999998 66655544233 32 13455554213444443
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+||+|+.
T Consensus 226 ~aDiIINaTp 235 (315)
T 3tnl_A 226 ESVIFTNATG 235 (315)
T ss_dssp TCSEEEECSS
T ss_pred CCCEEEECcc
Confidence 3899999987
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00057 Score=58.79 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
-..++++||+||++++|.+.++.+...|++|+++++++++.. . ... ..+|..+.+++...+.+... +.+|++
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 85 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL 85 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456899999999999999999999889999999998765421 1 111 22455554333333333221 369999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 86 v~nAg 90 (269)
T 3vtz_A 86 VNNAG 90 (269)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99987
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0015 Score=56.34 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHH---HHHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLV---AALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~---~~i~~~~~g~ 227 (347)
.|+++||+||++++|.+.++.+...|++|+++++++...+.++ ++ +.. ...|..+.++.. +.+.+. ++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~--g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADLEGAANVAEELAAT--RR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc--CC
Confidence 5789999999999999999999899999999997654333333 32 321 124555542222 222222 46
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 107 iD~lv~nAg 115 (273)
T 3uf0_A 107 VDVLVNNAG 115 (273)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCC
Confidence 999999987
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0017 Score=56.11 Aligned_cols=81 Identities=7% Similarity=0.116 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHHHcCCCe--eeecCCHHHHHHHHHHHC--CCC
Q 019012 156 KSGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKNKLGFDE--AFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
-.++++||+||+ +++|.+.++.+...|++|++++++. +..+.+.++.+-.. ..|..+.+++...+.+.. .+.
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 457899999988 5699999998888999999999987 55555553444322 245555423333333321 146
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 104 id~li~nAg 112 (280)
T 3nrc_A 104 LDAIVHSIA 112 (280)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 999999987
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00062 Score=56.69 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=62.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
.+|||+||+|.+|...++.+...|.+|+++++++++.+.+. .++. ...|..+.+++.+.++ ++|+||.+.|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCK-----GADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHT-----TCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhc-----CCCEEEEeCcC
Confidence 58999999999999999999999999999999877543221 1111 1234444323333332 49999999874
Q ss_pred h------------hHHHHHHhhhcC--CeEEEEccc
Q 019012 238 E------------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 238 ~------------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
. .....++.+.+. ++++.++..
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 113 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence 2 223455556554 488888754
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0016 Score=55.03 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=59.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+++||+||+|++|...+..+...|++|++++++.++.+ . ....|..+.+++.+.++++ .+++|++|.+.|..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~---~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----A---DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVG 73 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----c---cccCCcccHHHHHHHHHHc-CCCccEEEECCCCC
Confidence 47999999999999999988889999999998765321 0 1112222211333334433 24799999988731
Q ss_pred h-------------------HHHHHHhhhc--CCeEEEEccccc
Q 019012 239 M-------------------LDAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 239 ~-------------------~~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
. ++.+.+.+.+ .++++.++....
T Consensus 74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 1 1223334433 389999876543
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0015 Score=55.86 Aligned_cols=80 Identities=16% Similarity=0.258 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH---hHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ---KVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~---~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~-- 225 (347)
.++++||+||++++|.+.++.+...|++|++++++.. +.+.+.+++ |.. ...|..+.+++...+.+...
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999889999999876543 333332222 332 12455554233333333221
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+++|+++++.|
T Consensus 90 g~iD~lvnnAg 100 (262)
T 3ksu_A 90 GKVDIAINTVG 100 (262)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999988
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0018 Score=57.03 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC------------hHhHHHHHH---HcCCC---eeeecCCHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS------------SQKVDLLKN---KLGFD---EAFNYNDETDLV 217 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~------------~~~~~~~~~---~~g~~---~vi~~~~~~~~~ 217 (347)
-.|+++||+||++++|.++++.+...|++|++++++ .++.+.+.+ +.+.. ...|..+.+++.
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 357899999999999999999999999999999875 444333221 33432 124555543343
Q ss_pred HHHHHHCC--CCccEEEeCCC
Q 019012 218 AALKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 218 ~~i~~~~~--g~~d~vid~~g 236 (347)
..+.+... +.+|++|++.|
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 33333221 36999999987
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0016 Score=53.86 Aligned_cols=93 Identities=12% Similarity=0.165 Sum_probs=62.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCC-HHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYND-ETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~-~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|||+||+|.+|...++.+...|.+|++++++.++.+.+ .++. ...|..+ . +.+.+... ++|+||.+.|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~----~~~~~~~~-~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTP----EEMAKQLH-GMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCH----HHHHTTTT-TCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCH----HHHHHHHc-CCCEEEECCcC
Confidence 699999999999999999999999999999988754321 1221 1234443 2 23444333 59999999984
Q ss_pred h----------hHHHHHHhhhcC--CeEEEEcccc
Q 019012 238 E----------MLDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 238 ~----------~~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
. .....++.+++. ++++.++...
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 2 134455555543 5888887643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00086 Score=59.47 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=38.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLK 199 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~ 199 (347)
.++++||+||+|++|.++++.+...|++|++++ +++++.+.+.
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~ 88 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 88 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 468999999999999999999999999999999 8887766554
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0013 Score=55.53 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=55.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHHc-CCC---eeeecCCHHHHHHHHH---HHCCC-C
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNKL-GFD---EAFNYNDETDLVAALK---RCFPQ-G 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~~-g~~---~vi~~~~~~~~~~~i~---~~~~g-~ 227 (347)
+.++||+||+|++|.+.++.+...| ++|++++++.++.+.+. ++ +.. ...|..+.+++.+.++ +..+. .
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 5789999999999999999998899 99999999988777776 54 221 1245555423333333 32221 6
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 82 id~li~~Ag 90 (250)
T 1yo6_A 82 LSLLINNAG 90 (250)
T ss_dssp CCEEEECCC
T ss_pred CcEEEECCc
Confidence 999999886
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0014 Score=55.40 Aligned_cols=80 Identities=21% Similarity=0.305 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.+ ..+.. ...|-.+.+++...+++... ++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999999999998877 4444443332 23432 12455554233333333221 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 83 id~lv~nAg 91 (246)
T 3osu_A 83 LDVLVNNAG 91 (246)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00099 Score=57.62 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHH---cCCC---eeeecCCHHHHH---HHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNK---LGFD---EAFNYNDETDLV---AALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~---~g~~---~vi~~~~~~~~~---~~i~~~~~ 225 (347)
..++++||+||++++|.+.++.+...|++|+++++ ++++.+.+.++ .|.. ...|..+.+++. +.+.+..
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 105 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF- 105 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH-
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 45789999999999999999999999999999985 55554443322 3432 123555432333 3333322
Q ss_pred CCccEEEeCCCh
Q 019012 226 QGIDIYFDNVGG 237 (347)
Q Consensus 226 g~~d~vid~~g~ 237 (347)
+.+|++|++.|.
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 369999998874
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0012 Score=58.22 Aligned_cols=79 Identities=25% Similarity=0.337 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE---------CChHhHHHHHH---HcCCCeeeecCCHHHH---HHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA---------GSSQKVDLLKN---KLGFDEAFNYNDETDL---VAALK 221 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~---------~~~~~~~~~~~---~~g~~~vi~~~~~~~~---~~~i~ 221 (347)
.|+++||+||+|++|.++++.+...|++|++++ ++.++.+.+.+ ..+...+.|..+.+++ .+.+.
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 478999999999999999999988999999964 34454443321 2343334566554233 23333
Q ss_pred HHCCCCccEEEeCCC
Q 019012 222 RCFPQGIDIYFDNVG 236 (347)
Q Consensus 222 ~~~~g~~d~vid~~g 236 (347)
+.. +.+|++|++.|
T Consensus 88 ~~~-g~iD~lVnnAG 101 (319)
T 1gz6_A 88 DTF-GRIDVVVNNAG 101 (319)
T ss_dssp HHT-SCCCEEEECCC
T ss_pred HHc-CCCCEEEECCC
Confidence 322 46999999987
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0015 Score=55.67 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHH----HHHHcCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL----LKNKLGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~----~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
.++++||+||+|++|.+.+..+...|++|++++++.++... +.++.+.. ...|..+.+++...+++.. .+.
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 46789999999999999999888899999999986543322 22123432 2245555423433333322 246
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 93 id~li~~Ag 101 (265)
T 1h5q_A 93 ISGLIANAG 101 (265)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0045 Score=54.79 Aligned_cols=100 Identities=18% Similarity=0.170 Sum_probs=63.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHH----HHHHHcC--CC-eeeecCCHHHHHHHHHHHCCCCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD----LLKNKLG--FD-EAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~----~~~~~~g--~~-~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
.+.+|||+||+|.+|...++.+...|++|++++++.++.. .+.+..+ +. ...|..+.+++.+.+++ +++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence 4568999999999999999999999999999988654322 2221112 21 12355554234444443 3699
Q ss_pred EEEeCCChh------------------hHHHHHHhhhcC--CeEEEEccc
Q 019012 230 IYFDNVGGE------------------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 230 ~vid~~g~~------------------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
+||.+.+.. .....++.+++. +++|.++..
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~ 130 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSA 130 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 999998731 112344445443 589888764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0032 Score=53.33 Aligned_cols=73 Identities=26% Similarity=0.300 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.++++||+||+|++|.+.++.+...|++|++++++++. ++ +++.... .|. .. +....+.+.. ++|++|++
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~ 88 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN 88 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence 467899999999999999999998899999999998743 33 4442222 343 21 3333344332 59999999
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 89 Ag 90 (249)
T 1o5i_A 89 AG 90 (249)
T ss_dssp CC
T ss_pred CC
Confidence 87
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0025 Score=54.08 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECCh--HhHHHHHHHc-CCC---eeeecCCH-HHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSS--QKVDLLKNKL-GFD---EAFNYNDE-TDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~--~~~~~~~~~~-g~~---~vi~~~~~-~~~~~~i~~~~~--g 226 (347)
.++++||+||+|++|.+.++.+...|++ |++++++. +..+.+.+.. +.. ...|..+. +++.+.+.+... +
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4689999999999999999999899995 99998875 3344444222 221 12354432 244433333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|++|++.|
T Consensus 84 ~id~lv~~Ag 93 (254)
T 1sby_A 84 TVDILINGAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6999999988
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0018 Score=57.23 Aligned_cols=81 Identities=20% Similarity=0.284 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC----------hHhHHHHHH---HcCCCe---eeecCCHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS----------SQKVDLLKN---KLGFDE---AFNYNDETDLVAA 219 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~----------~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~ 219 (347)
-.|+++||+||++++|.+.+..+...|++|++++++ .++.+.+.+ ..+... ..|..+.+++...
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 357899999999999999999888899999999876 333333321 334321 2355544233333
Q ss_pred HHHHCC--CCccEEEeCCC
Q 019012 220 LKRCFP--QGIDIYFDNVG 236 (347)
Q Consensus 220 i~~~~~--g~~d~vid~~g 236 (347)
+.+... +.+|++|++.|
T Consensus 105 ~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp HHHHHHHHSCCCEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 333221 36999999988
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0027 Score=57.76 Aligned_cols=85 Identities=14% Similarity=0.100 Sum_probs=57.4
Q ss_pred hcCC-CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEECChHhH----------------HHHHHHcCCCe---eeec
Q 019012 152 VCSP-KSGEYVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQKV----------------DLLKNKLGFDE---AFNY 210 (347)
Q Consensus 152 ~~~~-~~~~~vLI~Ga~g~~G~~ai~la~~-~G~~V~~~~~~~~~~----------------~~~~~~~g~~~---vi~~ 210 (347)
...+ +.++++||+||++++|++++..+.. .|++|++++++.+.. +.++ +.|... ..|-
T Consensus 54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dv 132 (422)
T 3s8m_A 54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDA 132 (422)
T ss_dssp TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCT
T ss_pred ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecC
Confidence 3455 4678999999999999988777777 899999998765321 3344 566532 2355
Q ss_pred CCHHH---HHHHHHHHCCCCccEEEeCCCh
Q 019012 211 NDETD---LVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 211 ~~~~~---~~~~i~~~~~g~~d~vid~~g~ 237 (347)
.+++. +.+.+.+..+|.+|+++++.|.
T Consensus 133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 55422 3344444443579999998864
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0063 Score=49.15 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=65.8
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCC----------CEEEEEECChHhHHHHHHHcCCCeee---ecCCHHHHHHH
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHG----------CYVVGSAGSSQKVDLLKNKLGFDEAF---NYNDETDLVAA 219 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G----------~~V~~~~~~~~~~~~~~~~~g~~~vi---~~~~~~~~~~~ 219 (347)
..++++++||-+|+ |+ |..++.+++..| .+|++++.++... .-++ ..+ |.... +....
T Consensus 18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~-~~~~~~d~~~~-~~~~~ 88 (196)
T 2nyu_A 18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGA-TFLCPADVTDP-RTSQR 88 (196)
T ss_dssp CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTC-EEECSCCTTSH-HHHHH
T ss_pred CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCC-eEEEeccCCCH-HHHHH
Confidence 34688999999995 66 999999999986 7899999887420 0112 222 23332 44455
Q ss_pred HHHHCCC-CccEEEe-----CCCh-------------hhHHHHHHhhhcCCeEEEEcc
Q 019012 220 LKRCFPQ-GIDIYFD-----NVGG-------------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 220 i~~~~~g-~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.+...+ .||+|+. +++. ..+..+.+.|+++|+++....
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 5555554 7999994 3332 246678889999999987643
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0021 Score=54.98 Aligned_cols=94 Identities=11% Similarity=-0.012 Sum_probs=69.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.++.+||.+|+ |. |..+..+++.. |.+|++++.++...+.++ +.+.. .++..+.. ++ ....+.||+|+.
T Consensus 84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence 67889999995 66 98899999887 779999999999999988 54432 22222211 11 012247999996
Q ss_pred CCChhhHHHHHHhhhcCCeEEEEcc
Q 019012 234 NVGGEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
......+.++.+.|+++|+++....
T Consensus 155 ~~~~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 155 IYAPCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred eCChhhHHHHHHhcCCCcEEEEEEc
Confidence 5555678999999999999988754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0027 Score=53.47 Aligned_cols=73 Identities=25% Similarity=0.176 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.+.+|||+||+|.+|...++.+... |.+|+++++++++.+.+. .++. ...|..+.+++.+.++ ++|+||.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~ 75 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQ-----GIDALVI 75 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHT-----TCSEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHHc-----CCCEEEE
Confidence 4678999999999999999998888 789999999877654321 1222 2245555323333332 4899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 76 ~a~ 78 (253)
T 1xq6_A 76 LTS 78 (253)
T ss_dssp CCC
T ss_pred ecc
Confidence 887
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=55.36 Aligned_cols=102 Identities=10% Similarity=0.073 Sum_probs=69.2
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC---
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF--- 224 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~--- 224 (347)
....++++||-+|+ | .|..+..+++.. +.+|++++.+++..+.+++. .|....+..... +..+.+.+..
T Consensus 56 ~~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 56 TKISGAKRIIEIGT-F-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLIDSK 132 (239)
T ss_dssp HHHHTCSEEEEECC-T-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHCS
T ss_pred HHhhCcCEEEEEeC-C-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHhhc
Confidence 34567889999994 4 689999999988 56999999999887777633 354321111111 2222233221
Q ss_pred -----------C-CCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 -----------P-QGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 -----------~-g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
+ +.||+|+...+. ..++.+.+.|+++|+++...
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 569999977653 35688889999999998754
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0027 Score=54.56 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.+++++||+||+|++|.+.++.+...|++|+++ .++.++.+.+.+. .+.. ...|..+.+++...+++... +
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999777 5666655544322 2332 12355554233333333221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 104 ~id~li~nAg 113 (272)
T 4e3z_A 104 RLDGLVNNAG 113 (272)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999887
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0037 Score=54.01 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC----CeeeecCCHHHHHHHHHHHCCCCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF----DEAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
-.++++||+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++. ..+...... ++.+.+.+ +|+
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~-----~Di 197 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA-----ADG 197 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH-----SSE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc-----CCE
Confidence 46889999997 9999999999999999 899999999887765434431 112112211 34444443 899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
||+|+.
T Consensus 198 VInaTp 203 (283)
T 3jyo_A 198 VVNATP 203 (283)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 999987
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.002 Score=55.11 Aligned_cols=80 Identities=21% Similarity=0.225 Sum_probs=53.3
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChHh-----HHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--
Q 019012 157 SGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQK-----VDLLKNKLGFD---EAFNYNDETDLVAALKRCF-- 224 (347)
Q Consensus 157 ~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~~-----~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~-- 224 (347)
.++++||+||+ +++|.+.++.+...|++|++++++..+ .+.+.+..+.. ...|..+.+++.+.+++..
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 47899999998 899999999888899999999877532 23333233432 1245555423333333321
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
.+.+|++|.+.|
T Consensus 99 ~g~id~li~nAg 110 (267)
T 3gdg_A 99 FGQIDAFIANAG 110 (267)
T ss_dssp TSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136999999987
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0033 Score=51.21 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=47.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++||+||+|++|...++.+. .|++|++++++.+ ....|..+.+++.+.+.+. +.+|++|.+.|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence 79999999999999998888 8999999998753 1234555542444445544 46899999987
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0011 Score=56.66 Aligned_cols=80 Identities=11% Similarity=0.199 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC---CEEEEEECChHhHHHHHHHc---CCC-e--eeecCCHHHH---HHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHG---CYVVGSAGSSQKVDLLKNKL---GFD-E--AFNYNDETDL---VAALKRC 223 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G---~~V~~~~~~~~~~~~~~~~~---g~~-~--vi~~~~~~~~---~~~i~~~ 223 (347)
.++.++||+||+|++|.+.++.+...| ++|++++++.++.+.++ ++ +.. . ..|..+.+++ .+.+.+.
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 456799999999999999999998889 99999999876544433 22 221 1 2344443233 3333333
Q ss_pred CCC-CccEEEeCCC
Q 019012 224 FPQ-GIDIYFDNVG 236 (347)
Q Consensus 224 ~~g-~~d~vid~~g 236 (347)
.+. .+|++|.+.|
T Consensus 98 ~g~~~id~li~~Ag 111 (267)
T 1sny_A 98 TKDQGLNVLFNNAG 111 (267)
T ss_dssp HGGGCCSEEEECCC
T ss_pred cCCCCccEEEECCC
Confidence 332 5999999987
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.011 Score=52.55 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=62.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH----hHHHHHHHc-------CCC-eeeecCCHHHHHHHHHHHCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ----KVDLLKNKL-------GFD-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~----~~~~~~~~~-------g~~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
+.+|||+||+|.+|...++.+...|.+|++++++.. ..+.+. .. ++. ...|..+. + .+.+...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~-~---~~~~~~~ 99 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL-T---TCEQVMK 99 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH-H---HHHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH-H---HHHHHhc
Confidence 579999999999999999999999999999998543 333333 21 222 12344443 2 2333333
Q ss_pred CCccEEEeCCChh------------------hHHHHHHhhhcC--CeEEEEccc
Q 019012 226 QGIDIYFDNVGGE------------------MLDAALLNMRDH--GRIAVCGMV 259 (347)
Q Consensus 226 g~~d~vid~~g~~------------------~~~~~~~~l~~~--G~~v~~g~~ 259 (347)
++|+||.+++.. .....++.+.+. +++|.++..
T Consensus 100 -~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~ 152 (351)
T 3ruf_A 100 -GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASS 152 (351)
T ss_dssp -TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred -CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecH
Confidence 699999999731 012345555554 488888754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0014 Score=55.81 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHH---HHHHHHCCCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLV---AALKRCFPQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~---~~i~~~~~g~~d~ 230 (347)
.++++||+||++++|.+.++.+...|++|++++++.++ ..+ +++.. ...|..+.+++. +.+.+ .+.+|+
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~ 82 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVA-DLGDRARFAAADVTDEAAVASALDLAET--MGTLRI 82 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHH-HTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHH-hcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence 46899999999999999998888889999999986543 333 55542 224555542333 33333 247999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++++.|
T Consensus 83 lv~nAg 88 (257)
T 3tl3_A 83 VVNCAG 88 (257)
T ss_dssp EEECGG
T ss_pred EEECCC
Confidence 999998
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00087 Score=57.30 Aligned_cols=76 Identities=16% Similarity=0.146 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
.++++||+||+|++|.+.+..+...|++|++++++.++.+ ...+. ...|..+.+++.+.+.+... +++|+++.
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4789999999999999999999899999999998765422 11111 12455554233333333211 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 103 nAg 105 (260)
T 3un1_A 103 NAG 105 (260)
T ss_dssp CCC
T ss_pred CCC
Confidence 987
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.002 Score=54.62 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=69.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCC-
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQ- 226 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g- 226 (347)
....++.+||-+|+ +.|..++.+++.. +.+|++++.+++..+.+++. .|...-+..... +..+.+......
T Consensus 59 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~~ 135 (248)
T 3tfw_A 59 VRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGECP 135 (248)
T ss_dssp HHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSCC
T ss_pred HhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCCC
Confidence 34567899999994 4588889999887 46999999999888777633 254321222111 333334444332
Q ss_pred CccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.||+|+-.... ..++.+.+.|+++|.++.-..
T Consensus 136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 79999843332 367888999999999887543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00066 Score=57.82 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHC--CCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCF--PQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~--~g~~d~vid 233 (347)
.++++||+||+|++|.+.++.+...|++|++++++.++.+ + +. ...|..+.+++.+.+++.. .+.+|++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~--~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----G--FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----T--SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----c--ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999899999999998765432 1 11 2245555423333333321 246899999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 94 nAg 96 (253)
T 2nm0_A 94 NAG 96 (253)
T ss_dssp ECS
T ss_pred CCC
Confidence 877
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0016 Score=56.06 Aligned_cols=80 Identities=20% Similarity=0.247 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
.++++||+||+|++|.+.+..+...|++|++++++.++.+.+.+ ..+.. ...|..+.+++.+.+.+... +.+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 112 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI 112 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999888888889999999988765444331 23432 12455554233333333211 369
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|++|.+.|
T Consensus 113 d~li~~Ag 120 (279)
T 3ctm_A 113 DVFVANAG 120 (279)
T ss_dssp SEEEECGG
T ss_pred CEEEECCc
Confidence 99999887
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00088 Score=56.14 Aligned_cols=104 Identities=12% Similarity=0.102 Sum_probs=69.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC-C
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF-P 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~-~ 225 (347)
......++.+||-+|+ | .|..++.+++.. +.+|++++.+++..+.+++. .|...-+..... +..+.+.... .
T Consensus 48 ~~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~ 124 (233)
T 2gpy_A 48 HLLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELY 124 (233)
T ss_dssp HHHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTS
T ss_pred HHHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccC
Confidence 3344567889999994 4 788899999988 57999999999888877733 254211111111 2222222222 2
Q ss_pred CCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
+.||+|+..... ..++.+.+.|+++|+++...
T Consensus 125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 479999876552 36778888999999998764
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0036 Score=55.06 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=70.6
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCCeeeecCCHHHHHHHHHHHCC
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
+.....+.++.+||-+|+ |. |..+..+++..|++|++++.+++..+.+++.+ |...-+..... ++ .++ +
T Consensus 82 ~~~~~~~~~~~~vLDiGc-G~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~ 153 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGC-GW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----EDF-A 153 (318)
T ss_dssp HHTTSCCCTTCEEEEESC-TT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GGC-C
T ss_pred HHHhcCCCCcCEEEEEcc-cc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch----HHC-C
Confidence 335567789999999995 44 88888999887999999999999888887332 33211111111 11 111 2
Q ss_pred CCccEEEeC-----CCh----hhHHHHHHhhhcCCeEEEEccc
Q 019012 226 QGIDIYFDN-----VGG----EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 226 g~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+.||+|+.. .+. ..++.+.+.|+++|+++.....
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 579999875 331 3677888999999999886543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0018 Score=55.85 Aligned_cols=95 Identities=18% Similarity=0.245 Sum_probs=63.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|||+||+|.+|...++.+... |.+|+++++++++.+.+. ..++.. ..|..+. + .+.+... ++|+||.+.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---~~~~~~~-~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE-A---ALTSALQ-GVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH-H---HHHHHTT-TCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH-H---HHHHHHh-CCCEEEEeCC
Confidence 4899999999999999888877 899999999887666555 445532 2355553 2 2333332 5899999987
Q ss_pred hh------hHHHHHHhhhcC--CeEEEEcccc
Q 019012 237 GE------MLDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 237 ~~------~~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
.. .....++.+.+. ++++.++...
T Consensus 75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~ 106 (286)
T 2zcu_A 75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH 106 (286)
T ss_dssp -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 41 334555555442 5888887643
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.003 Score=54.14 Aligned_cols=81 Identities=19% Similarity=0.254 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
..++++||+||++++|.+.++.+...|++|++++ ++.++.+...+ ..+.. ..+|..+.+++.+.+.+... +
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999988999999998 45444333221 22321 12455554233333332221 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|++|.+.|
T Consensus 103 ~id~li~nAg 112 (269)
T 3gk3_A 103 KVDVLINNAG 112 (269)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0018 Score=54.30 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=68.6
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC---
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP--- 225 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~--- 225 (347)
...++.+||-+|+ +.|..++.+++.. +.+|++++.+++..+.+++. .|...-++.... +..+.+.++..
T Consensus 69 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~~ 145 (232)
T 3cbg_A 69 SLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGKP 145 (232)
T ss_dssp HHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSSS
T ss_pred HhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcCC
Confidence 3456789999994 4889999999887 56999999999887777632 355321222111 33333444321
Q ss_pred -CCccEEEeCCC-h---hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 -QGIDIYFDNVG-G---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 -g~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+||-... . ..++.+.+.|+++|.++.-..
T Consensus 146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46999984433 2 367888999999999987543
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00089 Score=56.31 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=62.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.++||+||+|.+|...++.+...|+ +|+++++++++.+... .-++. ...|..+. +.+.+... ++|++|++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~ 91 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFCC 91 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCH----HHHHHHhc-CCCEEEEC
Confidence 57899999999999999998888899 9999998876433222 11221 12343332 12333222 59999999
Q ss_pred CChh---------------hHHHHHHhhhc--CCeEEEEccccc
Q 019012 235 VGGE---------------MLDAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 235 ~g~~---------------~~~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
.|.. .....++.+.+ .++++.++....
T Consensus 92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (242)
T 2bka_A 92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 135 (242)
T ss_dssp CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence 9842 11233444444 368988876544
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0033 Score=52.80 Aligned_cols=101 Identities=11% Similarity=0.032 Sum_probs=67.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC----
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF---- 224 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---- 224 (347)
...++.+||-+| ++.|..++.+++.+ +.+|++++.+++..+.+++. .|...-+..... +..+.+..+.
T Consensus 67 ~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~~ 143 (237)
T 3c3y_A 67 KLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQE 143 (237)
T ss_dssp HHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSTT
T ss_pred HhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhccC
Confidence 345678999998 45788888999887 56999999999887777632 355321221111 2222333321
Q ss_pred -CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 -PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 -~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+||-.... ..++.+.+.|++||.++.-.
T Consensus 144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 3479999854432 35788899999999988754
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.005 Score=52.11 Aligned_cols=101 Identities=10% Similarity=0.046 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC----
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF---- 224 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~---- 224 (347)
...++++||-+| .+.|..++.+++.+ +.+|++++.+++..+.+++. .|...-+..... +..+.+..+.
T Consensus 76 ~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~~ 152 (247)
T 1sui_A 76 KLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDEK 152 (247)
T ss_dssp HHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSGG
T ss_pred HhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhccC
Confidence 345678999999 56788899999987 57999999999887777632 354221221111 2222233221
Q ss_pred -CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 -PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 -~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+||-.... ..++.+.+.|+++|.++.-.
T Consensus 153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 3479999854332 36788999999999998754
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0028 Score=55.33 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=71.6
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
+.....++++.+||-+|+ | .|..+..+++..|++|++++.+++..+.+++. .|...-+..... ++ .++ .
T Consensus 64 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~ 135 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGC-G-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW----EEF-D 135 (302)
T ss_dssp HHHTTCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CG----GGC-C
T ss_pred HHHHcCCCCcCEEEEeec-c-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CH----HHc-C
Confidence 335567899999999994 4 58889999999899999999999988777632 243211111111 21 122 4
Q ss_pred CCccEEEeCCC----------------hhhHHHHHHhhhcCCeEEEEccc
Q 019012 226 QGIDIYFDNVG----------------GEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 226 g~~d~vid~~g----------------~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+.||+|+.... ...++.+.+.|+++|+++.....
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 57999986432 13567888899999999987653
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0089 Score=50.76 Aligned_cols=96 Identities=18% Similarity=0.169 Sum_probs=65.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
+.++++||-.|+ |. |..++.+++ .|++|++++.++...+.+++. .+.. +..... ++.+. +..+.||+|
T Consensus 118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~---~~~~~fD~V 188 (254)
T 2nxc_A 118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAA---LPFGPFDLL 188 (254)
T ss_dssp CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHH---GGGCCEEEE
T ss_pred cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-Chhhc---CcCCCCCEE
Confidence 578999999995 44 777777776 577999999999887777632 3432 222111 22222 223479999
Q ss_pred EeCCCh----hhHHHHHHhhhcCCeEEEEccc
Q 019012 232 FDNVGG----EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 232 id~~g~----~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+.+.-. ..+..+.+.|+++|+++..+..
T Consensus 189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 189 VANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 975532 3567788899999999987653
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0034 Score=53.53 Aligned_cols=80 Identities=16% Similarity=0.210 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|++++++.+ ..+.+.+.+ +.. ...|..+.+++.+.+++... +.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4679999999999999999999899999999876644 334433122 211 12455554344433333321 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 86 id~lv~~Ag 94 (264)
T 3i4f_A 86 IDFLINNAG 94 (264)
T ss_dssp CCEEECCCC
T ss_pred CCEEEECCc
Confidence 999999998
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0026 Score=54.06 Aligned_cols=81 Identities=26% Similarity=0.291 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHH----HHHHHcCCC-e--eeecCCHHHHHHHHHHHC--
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVD----LLKNKLGFD-E--AFNYNDETDLVAALKRCF-- 224 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~----~~~~~~g~~-~--vi~~~~~~~~~~~i~~~~-- 224 (347)
..+++++||+||+|++|.+.+..+...|++|++++ ++.++.+ .++ +.+.. . ..|..+.+++...+++..
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 35678999999999999999998888999999888 4433322 223 33432 1 235555423333333221
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
.+.+|+++.+.|
T Consensus 89 ~g~id~lv~~Ag 100 (256)
T 3ezl_A 89 VGEIDVLVNNAG 100 (256)
T ss_dssp TCCEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136999999987
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.011 Score=48.22 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=70.3
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHH---cCCC--eeeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNK---LGFD--EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~---~g~~--~vi~~~~~~~~~~~i~~~~ 224 (347)
....++++++||-.|+ | .|..++.+++... .+|++++.+++..+.+++. .|.. .++..+. .+.+..
T Consensus 34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~----~~~~~~-- 105 (204)
T 3e05_A 34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA----PEGLDD-- 105 (204)
T ss_dssp HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT----TTTCTT--
T ss_pred HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh----hhhhhc--
Confidence 5567889999999995 5 5888999998863 6999999999988877632 3442 2222221 111111
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.+|+++..... ..++.+.+.|+++|+++....
T Consensus 106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 1369999987652 478889999999999998653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0043 Score=55.25 Aligned_cols=77 Identities=10% Similarity=0.124 Sum_probs=55.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEECChHhHHHHHHHcCC---C-eeeecCCHHHHHHHHHHHCCCCcc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLH-GC-YVVGSAGSSQKVDLLKNKLGF---D-EAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~-G~-~V~~~~~~~~~~~~~~~~~g~---~-~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
-.+.+|||+||+|.+|...++.+... |. +|+++++++.+.+.+.+.+.. . ...|.++. + .+.+... ++|
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~---~l~~~~~-~~D 93 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL-E---RLNYALE-GVD 93 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH-H---HHHHHTT-TCS
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH-H---HHHHHHh-cCC
Confidence 35789999999999999988888777 98 999999998877666534432 1 12355543 2 2333332 599
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
+||.+++.
T Consensus 94 ~Vih~Aa~ 101 (344)
T 2gn4_A 94 ICIHAAAL 101 (344)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999873
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.018 Score=43.44 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=53.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+.+|+|+|+ |.+|...++.+...|.+|+++++++++.+.+++.++...+ .|..+. + .+.+..-.++|++|-+++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~-~---~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI-K---TLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH-H---HHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH-H---HHHHcCcccCCEEEEeeC
Confidence 357999996 9999999999988999999999998888777634565322 233332 2 233322236999999998
Q ss_pred hh
Q 019012 237 GE 238 (347)
Q Consensus 237 ~~ 238 (347)
.+
T Consensus 79 ~~ 80 (140)
T 1lss_A 79 KE 80 (140)
T ss_dssp CH
T ss_pred Cc
Confidence 64
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0071 Score=56.02 Aligned_cols=80 Identities=18% Similarity=0.297 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH--hHHHHHHHcCCC-eeeecCCHHHHH---HHHHHHCCCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ--KVDLLKNKLGFD-EAFNYNDETDLV---AALKRCFPQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~--~~~~~~~~~g~~-~vi~~~~~~~~~---~~i~~~~~g~~d~ 230 (347)
+++++||+||+|++|++.++.+...|++|++++++.. +.+...++.+.. ..+|..+.++.. +.+.+..++.+|+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 5789999999999999988888888999999987643 222222255553 224544432333 3344444335999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
+|++.|
T Consensus 292 lV~nAG 297 (454)
T 3u0b_A 292 LVNNAG 297 (454)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 999987
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0031 Score=54.37 Aligned_cols=95 Identities=22% Similarity=0.300 Sum_probs=64.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|||+||+|.+|...++.+... |.+|++++++.++.+.+. ..++.. ..|..+. + .+.+... ++|+||.+.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~-~---~l~~~~~-~~d~vi~~a~ 75 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP-E---SLQKAFA-GVSKLLFISG 75 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH-H---HHHHHTT-TCSEEEECCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH-H---HHHHHHh-cCCEEEEcCC
Confidence 5899999999999999888877 899999999887766555 445532 2355553 2 2333332 5899999987
Q ss_pred hh--------hHHHHHHhhhcC--CeEEEEcccc
Q 019012 237 GE--------MLDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 237 ~~--------~~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
.. .....++++.+. ++++.++...
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 31 223445555544 4888877643
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0071 Score=51.21 Aligned_cols=100 Identities=14% Similarity=0.065 Sum_probs=70.9
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHc----CCCe--eeecCCHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKL----GFDE--AFNYNDETDLVAALKR 222 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~--vi~~~~~~~~~~~i~~ 222 (347)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++.+ |... ++.. ++.+. .
T Consensus 90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~----d~~~~--~ 161 (258)
T 2pwy_A 90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG----KLEEA--E 161 (258)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES----CGGGC--C
T ss_pred HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC----chhhc--C
Confidence 5567899999999995 5 488899999885 569999999999888887332 5322 2222 11110 0
Q ss_pred HCCCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 223 CFPQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 223 ~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+..+.+|+|+..... ..+..+.+.|+++|+++.+..
T Consensus 162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 162 LEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 122379999876553 478999999999999988753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0062 Score=53.00 Aligned_cols=92 Identities=21% Similarity=0.262 Sum_probs=60.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-------HhHHHHHH--HcCCCe-eeecCCHHHHHHHHHHHCCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-------QKVDLLKN--KLGFDE-AFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-------~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~g~ 227 (347)
+.+|||+||+|.+|...++.+...|.+|++++++. ++.+.+++ ..++.. ..|..+.+++.+.++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-----Q 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----T
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-----C
Confidence 45799999999999999988888899999999886 54443320 345532 245555423333332 4
Q ss_pred ccEEEeCCCh---hhHHHHHHhhhcC---CeEE
Q 019012 228 IDIYFDNVGG---EMLDAALLNMRDH---GRIA 254 (347)
Q Consensus 228 ~d~vid~~g~---~~~~~~~~~l~~~---G~~v 254 (347)
+|+||.+++. ......++++... .+++
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 9999999984 2334555555543 4666
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0032 Score=53.36 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=71.7
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++. .|....++.... ++.+. +..
T Consensus 87 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~ 160 (255)
T 3mb5_A 87 AYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIYEG---IEE 160 (255)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGGGC---CCC
T ss_pred HhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chhhc---cCC
Confidence 5577899999999995 4 488899999885 56999999999888777633 254321221111 22111 222
Q ss_pred CCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
+.+|+|+-.... ..++.+.+.|+++|+++.+.
T Consensus 161 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 161 ENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 379999987764 37899999999999998875
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0044 Score=49.13 Aligned_cols=102 Identities=18% Similarity=0.223 Sum_probs=70.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHH---cCCC-eeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNK---LGFD-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++. .|.. .+ .... +..+.+.. ..
T Consensus 19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~-~~ 92 (178)
T 3hm2_A 19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDD-VP 92 (178)
T ss_dssp HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGG-CC
T ss_pred HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhc-cC
Confidence 4456789999999995 5 488999999887 56999999999888877732 3443 23 2221 11111221 11
Q ss_pred CCccEEEeCCCh---hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 QGIDIYFDNVGG---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+..... ..++.+.+.|+++|+++....
T Consensus 93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 479999976653 368999999999999987653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0034 Score=51.26 Aligned_cols=74 Identities=22% Similarity=0.292 Sum_probs=52.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.++||+||+|++|...++.+... +|+++++++++.+.+.++++.. ...|..+.+++.+.+.+ .+++|++|.+.|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag 75 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE--AGPLDLLVHAVG 75 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence 36899999999999887776655 9999999988777665344431 12355554244444444 247999999987
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00059 Score=58.60 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH---HHHHHHCCCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV---AALKRCFPQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~i~~~~~g~~d~vid 233 (347)
.|+++||+||+|++|.+.++.+...|++|++++++.++.+... . ...|..+.+... +.+.+.. +++|++++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~----~~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-H----LPGDLREAAYADGLPGAVAAGL-GRLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-E----CCCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-c----cCcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence 5789999999999999999999889999999998765432111 1 123444432222 2222222 36999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 101 nAg 103 (266)
T 3uxy_A 101 NAG 103 (266)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0024 Score=53.19 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=68.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC--
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~-- 225 (347)
....++.+||-.|+ | .|..++.+++.. +.+|++++.+++..+.+++. .|...-+..... +..+.+.++..
T Consensus 65 ~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~~~ 141 (229)
T 2avd_A 65 ARLIQAKKALDLGT-F-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLAAG 141 (229)
T ss_dssp HHHTTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEEcC-C-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHhcC
Confidence 34567889999994 4 888899999876 56999999999887777633 254211221111 22233333221
Q ss_pred --CCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 --QGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 --g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+-.... ..++.+.+.|+++|.++....
T Consensus 142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 469998754432 368889999999999987643
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0041 Score=54.17 Aligned_cols=93 Identities=13% Similarity=0.059 Sum_probs=63.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.+.+++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.. .+++. . + +.+.. ..+|++|+
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~-~----~~~~~-~~aDivIn 210 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL--A-E----AETRL-AEYDIIIN 210 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--H-H----HHHTG-GGCSEEEE
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--H-H----HHhhh-ccCCEEEE
Confidence 5789999996 9999999999999998 9999999988876665466652 23322 1 2 22211 25999999
Q ss_pred CCChhhH------HHHHHhhhcCCeEEEEcc
Q 019012 234 NVGGEML------DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g~~~~------~~~~~~l~~~G~~v~~g~ 258 (347)
|++.... ......++++..++.+..
T Consensus 211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 9985321 011234556666666654
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.004 Score=51.55 Aligned_cols=103 Identities=15% Similarity=0.060 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCe---eeecCCHHHHHHHHHHHC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDE---AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~~~~~i~~~~ 224 (347)
....++.+||-+| .+.|..++.+++.. +.+|++++.+++..+.+++. .|... ++..+.. +....+....
T Consensus 54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~ 130 (223)
T 3duw_A 54 VQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL-DSLQQIENEK 130 (223)
T ss_dssp HHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH-HHHHHHHHTT
T ss_pred HHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH-HHHHHHHhcC
Confidence 3456788999999 45788888999887 57999999999887777632 35432 2222211 2222222211
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+||-.... ..++.+.+.|+++|.++.-..
T Consensus 131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 1369999854432 367888999999998876543
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0012 Score=54.02 Aligned_cols=144 Identities=17% Similarity=0.236 Sum_probs=86.3
Q ss_pred CCCCCEEEEecCcceeEE-eeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 019012 96 FKPGDLVAGLTGWEEYSL-IRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLV 174 (347)
Q Consensus 96 ~~~Gd~V~~~g~~~~~~~-v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~a 174 (347)
+++|+.+.....|.+|.. .+... .+.+ +.. +++..+..+ ........+.. .+.++.+||-.|+ |. |..+
T Consensus 6 ~~~~~~~~~~p~w~~~~~~~~~~~-~~~~-~~~---~~f~~~~~~-~~~~~~~~l~~--~~~~~~~vLDiG~-G~-G~~~ 75 (205)
T 3grz_A 6 INLSRHLAIVPEWEDYQPVFKDQE-IIRL-DPG---LAFGTGNHQ-TTQLAMLGIER--AMVKPLTVADVGT-GS-GILA 75 (205)
T ss_dssp EEEETTEEEEETTCCCCCSSTTCE-EEEE-SCC--------CCHH-HHHHHHHHHHH--HCSSCCEEEEETC-TT-SHHH
T ss_pred EEECCcEEEeccccccccCCCCce-eEEe-cCC---cccCCCCCc-cHHHHHHHHHH--hccCCCEEEEECC-CC-CHHH
Confidence 456777777778888877 66555 7777 555 444222111 01111122211 2568899999995 43 7777
Q ss_pred HHHHHHCCC-EEEEEECChHhHHHHHHH---cCCC--eeeecCCHHHHHHHHHHHCCCCccEEEeCCChh----hHHHHH
Q 019012 175 GQLAKLHGC-YVVGSAGSSQKVDLLKNK---LGFD--EAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE----MLDAAL 244 (347)
Q Consensus 175 i~la~~~G~-~V~~~~~~~~~~~~~~~~---~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~----~~~~~~ 244 (347)
..+++. +. +|++++.++...+.+++. .+.. .++..+ + .+...+.||+|+....-. .++.+.
T Consensus 76 ~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~----~~~~~~~fD~i~~~~~~~~~~~~l~~~~ 146 (205)
T 3grz_A 76 IAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTS----L----LADVDGKFDLIVANILAEILLDLIPQLD 146 (205)
T ss_dssp HHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESS----T----TTTCCSCEEEEEEESCHHHHHHHGGGSG
T ss_pred HHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecc----c----cccCCCCceEEEECCcHHHHHHHHHHHH
Confidence 777764 66 999999999887777632 2432 222222 1 112234799999765543 356666
Q ss_pred HhhhcCCeEEEEcc
Q 019012 245 LNMRDHGRIAVCGM 258 (347)
Q Consensus 245 ~~l~~~G~~v~~g~ 258 (347)
+.|+++|+++..+.
T Consensus 147 ~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 147 SHLNEDGQVIFSGI 160 (205)
T ss_dssp GGEEEEEEEEEEEE
T ss_pred HhcCCCCEEEEEec
Confidence 78899999988654
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0097 Score=53.47 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=65.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE- 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~- 238 (347)
+|+|+|| |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+.+.+.+.++ ++|+|++|++..
T Consensus 18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~-----~~DvVi~~~p~~~ 89 (365)
T 3abi_A 18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMK-----EFELVIGALPGFL 89 (365)
T ss_dssp EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHT-----TCSEEEECCCGGG
T ss_pred EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHh-----CCCEEEEecCCcc
Confidence 6999997 9999998887753 568999999998888777 443333456665423333332 489999999864
Q ss_pred hHHHHHHhhhcCCeEEEEcc
Q 019012 239 MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~ 258 (347)
+...+-.|+..+-+++.+..
T Consensus 90 ~~~v~~~~~~~g~~yvD~s~ 109 (365)
T 3abi_A 90 GFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHHHTCEEEECCC
T ss_pred cchHHHHHHhcCcceEeeec
Confidence 45556667788888888754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0051 Score=52.60 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEE-CChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSA-GSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~-~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
.++++||+||+|++|.+.++.+...|++|++++ ++.++.+.+.++ .+.. ..+|..+.+++.+.+.+... +.
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 467999999999999999999999999987655 555444433212 2322 12455554333333333211 36
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|++|.+.|
T Consensus 105 id~li~nAg 113 (267)
T 4iiu_A 105 WYGVVSNAG 113 (267)
T ss_dssp CSEEEECCC
T ss_pred ccEEEECCC
Confidence 999999987
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0058 Score=52.50 Aligned_cols=74 Identities=12% Similarity=0.150 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++++++|+|+ |++|.++++.+...|++|+++.++.++.+.+.++++....++..+.++ +.+ +.+|+++++++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~---~~~DivVn~t~ 189 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEG---HEFDLIINATS 189 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTT---CCCSEEEECCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH----hcc---CCCCEEEECCC
Confidence 5789999997 899999999999999999999999888766654655311111111001 111 46999999998
Q ss_pred hh
Q 019012 237 GE 238 (347)
Q Consensus 237 ~~ 238 (347)
..
T Consensus 190 ~~ 191 (271)
T 1nyt_A 190 SG 191 (271)
T ss_dssp CG
T ss_pred CC
Confidence 54
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.015 Score=51.68 Aligned_cols=95 Identities=25% Similarity=0.230 Sum_probs=63.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----HhHHHHHH--HcCCCe-eeecCCHHHHHHHHHHHCCCCccE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----QKVDLLKN--KLGFDE-AFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
..+|||+||+|.+|...++.+...|.+|++++++. ++.+.+.+ ..++.. ..|..+.+++.+.+++ .++|+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~ 86 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI 86 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence 35799999999999999999988999999999976 44443330 335532 2455554344444443 26999
Q ss_pred EEeCCChh---hHHHHHHhhhcCC---eEEE
Q 019012 231 YFDNVGGE---MLDAALLNMRDHG---RIAV 255 (347)
Q Consensus 231 vid~~g~~---~~~~~~~~l~~~G---~~v~ 255 (347)
||.+.+.. .....+++++..| +++.
T Consensus 87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 87 VVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp EEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 99999853 3445666666545 5553
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0041 Score=55.04 Aligned_cols=96 Identities=19% Similarity=0.135 Sum_probs=61.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
-+|||+||+|.+|...++.+...|.+|++++++..+.+.+. ..++.. ..|..+. + .+.+... ++|+||.+.+.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~-~---~~~~~~~-~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH-A---GLERALR-GLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH-H---HHHHHTT-TCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH-H---HHHHHHc-CCCEEEECCcc
Confidence 37999999999999999999889999999999876544333 334422 2355443 2 2333332 59999999873
Q ss_pred hh----------------HHHHHHhhhc-C-CeEEEEcccc
Q 019012 238 EM----------------LDAALLNMRD-H-GRIAVCGMVS 260 (347)
Q Consensus 238 ~~----------------~~~~~~~l~~-~-G~~v~~g~~~ 260 (347)
.. ....++.+.+ + ++++.++...
T Consensus 88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~ 128 (342)
T 2x4g_A 88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY 128 (342)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence 10 1234444443 3 6899887643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.015 Score=50.76 Aligned_cols=76 Identities=16% Similarity=0.193 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC---hHhHHHHHHHcC----CC-eeeecCCHHHHHHHHHHHCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS---SQKVDLLKNKLG----FD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~---~~~~~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
-.++++||+|+ |+.|.+++..+...|+ +|+++.++ .++.+.+.++++ .. .+++..+.+.+.+.+.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~----- 219 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA----- 219 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----
Confidence 35789999997 9999999999999999 89999999 665555442332 21 2344433101123333
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
.+|++|+|+..
T Consensus 220 ~~DiIINaTp~ 230 (312)
T 3t4e_A 220 SADILTNGTKV 230 (312)
T ss_dssp HCSEEEECSST
T ss_pred CceEEEECCcC
Confidence 38999999874
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0034 Score=52.03 Aligned_cols=103 Identities=13% Similarity=0.093 Sum_probs=67.7
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC--
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~-- 225 (347)
....++.+||=+|+ +.|..++.+++.+ +.+|++++.+++..+.+++. .|...-+..... +..+.+.....
T Consensus 60 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 60 VKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG 136 (225)
T ss_dssp HHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred HHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence 34457889999984 4588889999876 56999999999887777633 354321111111 22233333321
Q ss_pred --CCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 --QGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 --g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+-.... ..++.+.+.|+++|.++.-..
T Consensus 137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 469999854442 357888899999999987543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0026 Score=61.44 Aligned_cols=80 Identities=24% Similarity=0.339 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---------ChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---------SSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---------~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
.|+++||+||++++|.+.+..+...|++|+++++ +.++.+.+.+ ..+...+.|..+.++....+++..
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~ 97 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence 5789999999999999999988889999999876 4443333221 345444556555423333333332
Q ss_pred C--CCccEEEeCCC
Q 019012 225 P--QGIDIYFDNVG 236 (347)
Q Consensus 225 ~--g~~d~vid~~g 236 (347)
. +.+|++|++.|
T Consensus 98 ~~~g~iDiLVnnAG 111 (613)
T 3oml_A 98 KAFGRVDILVNNAG 111 (613)
T ss_dssp -------CEECCCC
T ss_pred HHCCCCcEEEECCC
Confidence 2 36999999988
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0069 Score=54.60 Aligned_cols=83 Identities=14% Similarity=0.070 Sum_probs=54.5
Q ss_pred cCC-CCCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEECChHh---------------H-HHHHHHcCCCe---eeecC
Q 019012 153 CSP-KSGEYVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQK---------------V-DLLKNKLGFDE---AFNYN 211 (347)
Q Consensus 153 ~~~-~~~~~vLI~Ga~g~~G~~ai~la~~-~G~~V~~~~~~~~~---------------~-~~~~~~~g~~~---vi~~~ 211 (347)
..+ ..++++||+||++++|++.+..+.. .|++|++++++.++ . +.++ +.|... ..|-.
T Consensus 41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvt 119 (405)
T 3zu3_A 41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAF 119 (405)
T ss_dssp CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCC
Confidence 444 5678899999999999988777777 89999998865432 1 2334 556431 23555
Q ss_pred CHHHHH---HHHHHHCCCCccEEEeCCCh
Q 019012 212 DETDLV---AALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 212 ~~~~~~---~~i~~~~~g~~d~vid~~g~ 237 (347)
+++... +.+.+.. |.+|+++++.|.
T Consensus 120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~ 147 (405)
T 3zu3_A 120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS 147 (405)
T ss_dssp SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence 542333 3333333 479999999874
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.03 Score=43.23 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=60.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-hHhHHHHHHHc--CCCeee--ecCCHHHHHHHHHHHCCCCccEEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-SQKVDLLKNKL--GFDEAF--NYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-~~~~~~~~~~~--g~~~vi--~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
..+++|.|+ |.+|...++.+...|.+|++++++ +++.+.+.+.+ |. .++ |..++ + .+++..-.++|+|+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~~~-~---~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSNDS-S---VLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTTSH-H---HHHHHTTTTCSEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCCCH-H---HHHHcChhhCCEEE
Confidence 457899996 999999999999999999999987 46555554233 44 233 33332 2 34443224699999
Q ss_pred eCCChhhH----HHHHHhhhcCCeEEEE
Q 019012 233 DNVGGEML----DAALLNMRDHGRIAVC 256 (347)
Q Consensus 233 d~~g~~~~----~~~~~~l~~~G~~v~~ 256 (347)
-+++.+.. ....+.+.+..+++..
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 77 ALSDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp ECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 99986532 2333444445566553
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0099 Score=52.01 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+|.|+|. |.+|...++.++..|++|++.+++.++ +.+. +.|+.. . ++.+.+. ..|+|+-++
T Consensus 140 l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~-~------~l~ell~-----~aDvV~l~~ 204 (307)
T 1wwk_A 140 LEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKF-V------DLETLLK-----ESDVVTIHV 204 (307)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEE-C------CHHHHHH-----HCSEEEECC
T ss_pred cCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCccc-c------CHHHHHh-----hCCEEEEec
Confidence 35789999995 999999999999999999999988776 5566 777642 1 2223333 289999887
Q ss_pred Chh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 236 GGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
... .+ ...+..|++++.++.++.
T Consensus 205 p~~~~t~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 205 PLVESTYHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp CCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred CCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence 631 22 467788999999988875
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.011 Score=54.00 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=53.6
Q ss_pred hcCCCCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEECChH---------------hHH-HHHHHcCCCe---eeec
Q 019012 152 VCSPKSGEYVFVSAASGAVGQL--VGQLAKLHGCYVVGSAGSSQ---------------KVD-LLKNKLGFDE---AFNY 210 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~--ai~la~~~G~~V~~~~~~~~---------------~~~-~~~~~~g~~~---vi~~ 210 (347)
...+..|+++||+||++++|++ .+..+...|++|++++++.. ..+ .++ +.|... .+|-
T Consensus 54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dv 132 (418)
T 4eue_A 54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDA 132 (418)
T ss_dssp SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCT
T ss_pred cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeC
Confidence 3456789999999999999998 44444445999999987532 222 233 555431 2455
Q ss_pred CCHHHHHHHHHHHC--CCCccEEEeCCCh
Q 019012 211 NDETDLVAALKRCF--PQGIDIYFDNVGG 237 (347)
Q Consensus 211 ~~~~~~~~~i~~~~--~g~~d~vid~~g~ 237 (347)
.+.++....+.+.. .|.+|+++++.|.
T Consensus 133 td~~~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 133 FSNETKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 55423333333322 2479999998874
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.01 Score=51.69 Aligned_cols=93 Identities=20% Similarity=0.258 Sum_probs=60.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC-----hHhHHHHHH--HcCCCe-eeecCCHHHHHHHHHHHCCCCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS-----SQKVDLLKN--KLGFDE-AFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~-----~~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
..+|||+||+|.+|...++.+...|.+|++++++ +++.+.+++ ..++.. ..|..+.+++.+.++ ++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-----~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-----QVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-----TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-----CCC
Confidence 3579999999999999999998889999999987 344443330 234422 235555423333332 599
Q ss_pred EEEeCCChh-------hHHHHHHhhhcCC---eEEE
Q 019012 230 IYFDNVGGE-------MLDAALLNMRDHG---RIAV 255 (347)
Q Consensus 230 ~vid~~g~~-------~~~~~~~~l~~~G---~~v~ 255 (347)
+||.+++.. .....++++...| +++.
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 79 VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp EEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred EEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence 999998742 3345566665544 6763
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0012 Score=55.54 Aligned_cols=97 Identities=8% Similarity=-0.031 Sum_probs=66.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----C-eeeecCCHHHHHHHHHHHCCCCcc
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----D-EAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
..+|.+||-+|. +.|..+..+++..+.+|++++.++.-.+.++ +... . .++.. ++...+..+..+.||
T Consensus 58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~----~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKG----LWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEES----CHHHHGGGSCTTCEE
T ss_pred ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEee----hHHhhcccccccCCc
Confidence 368999999994 4688888888877789999999999888887 4322 1 12222 232233333344798
Q ss_pred EE-EeCCCh-----------hhHHHHHHhhhcCCeEEEEcc
Q 019012 230 IY-FDNVGG-----------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 230 ~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+ +|+... ..++++.+.|+|||+++.+..
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~ 171 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence 87 565431 145778899999999988653
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0019 Score=54.14 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=69.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCC-
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQ- 226 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g- 226 (347)
....+.++++||-+|+ | .|..++.+++..+.+|++++.+++..+.+++. .|...+ ..... +.. ..+..+
T Consensus 85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~---~~~~~~~ 157 (235)
T 1jg1_A 85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG-DGS---KGFPPKA 157 (235)
T ss_dssp HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGG---GCCGGGC
T ss_pred HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC-Ccc---cCCCCCC
Confidence 4457889999999995 5 78889999988778999999999887777632 344322 11111 110 111112
Q ss_pred CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.||+|+.+..- ...+.+.+.|+++|+++..-.
T Consensus 158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence 59999987664 355788899999999887543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.012 Score=52.67 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=60.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH--CCCEEEEEECChHhH-------------HHHHHHcCCC-eeeecCCHHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKL--HGCYVVGSAGSSQKV-------------DLLKNKLGFD-EAFNYNDETDLVAAL 220 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~--~G~~V~~~~~~~~~~-------------~~~~~~~g~~-~vi~~~~~~~~~~~i 220 (347)
.+.+|||+||+|.+|...++.+.. .|++|++++++.... .... ..++. ...|..+. + .+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~-~---~~ 83 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI-GFKGEVIAADINNP-L---DL 83 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGT-TCCSEEEECCTTCH-H---HH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcc-ccCceEEECCCCCH-H---HH
Confidence 467999999999999998888888 899999999865411 1011 11121 12355443 2 23
Q ss_pred HHHCCCCccEEEeCCChh----------------hHHHHHHhhhc-CCeEEEEccc
Q 019012 221 KRCFPQGIDIYFDNVGGE----------------MLDAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 221 ~~~~~g~~d~vid~~g~~----------------~~~~~~~~l~~-~G~~v~~g~~ 259 (347)
.++...++|+||.+.+.. .....++.+++ ++++|.++..
T Consensus 84 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~ 139 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSA 139 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred HHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcH
Confidence 333234799999998821 11234444443 5678877763
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0089 Score=50.71 Aligned_cols=103 Identities=9% Similarity=0.018 Sum_probs=71.6
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC----eeeecCCHHHHHHHHHHH
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD----EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~----~vi~~~~~~~~~~~i~~~ 223 (347)
.+.....+.++.+||-+|+ | .|..+..+++..|++|++++.++...+.++ +.... .++..+-. ++ ..
T Consensus 46 ~~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~d~~-~~-----~~ 116 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGS-G-LGGGCMYINEKYGAHTHGIDICSNIVNMAN-ERVSGNNKIIFEANDIL-TK-----EF 116 (266)
T ss_dssp HHTTTCCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HTCCSCTTEEEEECCTT-TC-----CC
T ss_pred HHHHhcCCCCCCEEEEECC-C-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhhcCCCeEEEECccc-cC-----CC
Confidence 3335567889999999994 4 788888899877899999999999999988 44321 12222111 10 11
Q ss_pred CCCCccEEEeCCCh---------hhHHHHHHhhhcCCeEEEEccc
Q 019012 224 FPQGIDIYFDNVGG---------EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 224 ~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
..+.||+|+....- ..++.+.+.|+++|+++.....
T Consensus 117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 12479999975431 2568888999999999987653
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0033 Score=51.53 Aligned_cols=99 Identities=13% Similarity=0.056 Sum_probs=68.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCe--eeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDE--AFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~--vi~~~~~~~~~~~i~~~~~ 225 (347)
....++++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++. .|... ++..+. .+... ..
T Consensus 71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~----~~~~~--~~ 141 (210)
T 3lbf_A 71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG----WQGWQ--AR 141 (210)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG----GGCCG--GG
T ss_pred HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc----ccCCc--cC
Confidence 4567889999999995 4 58888888888 78999999999888877733 24332 222211 11111 12
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 QGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+....- ...+.+.+.|+++|+++..-.
T Consensus 142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred CCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence 379999987654 344578899999999887643
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.017 Score=54.39 Aligned_cols=78 Identities=17% Similarity=0.264 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHh---H----HHHHHHcCCCe---eeecCCHHHHHHHHHHH
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQK---V----DLLKNKLGFDE---AFNYNDETDLVAALKRC 223 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~---~----~~~~~~~g~~~---vi~~~~~~~~~~~i~~~ 223 (347)
++++.++||+||+|++|...+..+...|+ +|+.++++... . +.++ ..|... ..|..+.+.+...+.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence 56789999999999999999988888899 79999987631 2 2233 445421 2455655344444444
Q ss_pred CCCCccEEEeCCC
Q 019012 224 FPQGIDIYFDNVG 236 (347)
Q Consensus 224 ~~g~~d~vid~~g 236 (347)
+.+|+||.+.|
T Consensus 334 --~~ld~VVh~AG 344 (511)
T 2z5l_A 334 --YPPNAVFHTAG 344 (511)
T ss_dssp --SCCSEEEECCC
T ss_pred --CCCcEEEECCc
Confidence 56999999987
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.016 Score=54.27 Aligned_cols=81 Identities=21% Similarity=0.272 Sum_probs=55.9
Q ss_pred CCCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChH---h----HHHHHHHcCCCe---eeecCCHHHHHHHHH
Q 019012 155 PKSG--EYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQ---K----VDLLKNKLGFDE---AFNYNDETDLVAALK 221 (347)
Q Consensus 155 ~~~~--~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~---~----~~~~~~~~g~~~---vi~~~~~~~~~~~i~ 221 (347)
++++ .++||+||+|++|...++.+...|+ +|+.+.++.. + .+.++ ..|... ..|..+.+.+...+.
T Consensus 234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~ 312 (496)
T 3mje_A 234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLA 312 (496)
T ss_dssp CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence 3455 8999999999999999888888899 8888888632 1 23334 556531 245555534555555
Q ss_pred HHCCC-CccEEEeCCC
Q 019012 222 RCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 222 ~~~~g-~~d~vid~~g 236 (347)
++... .+|++|.+.|
T Consensus 313 ~i~~~g~ld~vVh~AG 328 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAG 328 (496)
T ss_dssp TCCTTSCEEEEEECCC
T ss_pred HHHHhCCCeEEEECCc
Confidence 54333 7999999887
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0021 Score=56.88 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=52.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh---H-HHHHHHc------CCC---eeeecCCHHHHHHHHHHHC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK---V-DLLKNKL------GFD---EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~---~-~~~~~~~------g~~---~vi~~~~~~~~~~~i~~~~ 224 (347)
++++||+||+|++|.+.+..+...|++|+.+.++.++ . +.++ .. +.. ...|..+.+++...+.+..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 5789999999999999999999999987776654322 1 2222 22 121 1246665535555555544
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
.+.+|++|++.|
T Consensus 81 ~g~iD~lVnnAG 92 (327)
T 1jtv_A 81 EGRVDVLVCNAG 92 (327)
T ss_dssp TSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 457999999886
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.011 Score=51.82 Aligned_cols=92 Identities=13% Similarity=0.139 Sum_probs=60.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh------HhHHHHH--HHcCCCe-eeecCCHHHHHHHHHHHCCCCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS------QKVDLLK--NKLGFDE-AFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~------~~~~~~~--~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
..+|||+||+|.+|...++.+...|.+|++++++. ++.+.+. ...++.. ..|..+.+++.+.+ . ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~----~-~~ 78 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL----K-QV 78 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH----T-TC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH----c-CC
Confidence 35799999999999999999888899999999875 3333332 0335432 24555542333333 2 49
Q ss_pred cEEEeCCChh---hHHHHHHhhhcC---CeEE
Q 019012 229 DIYFDNVGGE---MLDAALLNMRDH---GRIA 254 (347)
Q Consensus 229 d~vid~~g~~---~~~~~~~~l~~~---G~~v 254 (347)
|+||.+++.. .....++.+... ++++
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 79 DIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 9999999852 345566665543 3676
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0031 Score=55.83 Aligned_cols=101 Identities=22% Similarity=0.168 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----C--CCee--eecCCHHHHHHHHHHHCCC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----G--FDEA--FNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g--~~~v--i~~~~~~~~~~~i~~~~~g 226 (347)
.-++.+|||+||+|.+|...+..+...|.+|++++++.++.+.+.+.+ + +..+ .|..+. + .+.+...
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~~- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-G---AYDEVIK- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-T---TTTTTTT-
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-H---HHHHHHc-
Confidence 345789999999999999999988888999999999887665554221 2 2211 243332 1 1222221
Q ss_pred CccEEEeCCChh---------------hHHHHHHhhhc---CCeEEEEcccc
Q 019012 227 GIDIYFDNVGGE---------------MLDAALLNMRD---HGRIAVCGMVS 260 (347)
Q Consensus 227 ~~d~vid~~g~~---------------~~~~~~~~l~~---~G~~v~~g~~~ 260 (347)
++|+||.+.+.. .....++.+.+ .++++.++...
T Consensus 83 ~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 83 GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 589999998731 11234444442 36899887643
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0042 Score=59.76 Aligned_cols=104 Identities=20% Similarity=0.234 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh---------HhHHHHHH---HcCCCeeeecCCH---HHHHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS---------QKVDLLKN---KLGFDEAFNYNDE---TDLVAALK 221 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~---------~~~~~~~~---~~g~~~vi~~~~~---~~~~~~i~ 221 (347)
.++++||+||++++|++.+..+...|++|++++++. ++.+.+.+ ..|...+.|..+. +.+.+.+.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999987643 33332221 3344334554443 13333333
Q ss_pred HHCCCCccEEEeCCChh-----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 222 RCFPQGIDIYFDNVGGE-----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 222 ~~~~g~~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
+.. |.+|+++++.|.. .+ +.++..|++ +|++|.++...+
T Consensus 87 ~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag 153 (604)
T 2et6_A 87 KNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG 153 (604)
T ss_dssp HHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence 322 4699999998820 11 334555643 589999886543
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.014 Score=50.70 Aligned_cols=92 Identities=21% Similarity=0.260 Sum_probs=60.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh------HhHHHHHH--HcCCCe-eeecCCHHHHHHHHHHHCCCCc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS------QKVDLLKN--KLGFDE-AFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~------~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
..+|||+||+|.+|...++.+...|.+|++++++. ++.+.+++ ..|+.. ..|..+.+++.+.++ ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence 35799999999999999999988999999999873 33333320 335432 245555424444443 49
Q ss_pred cEEEeCCChh---hHHHHHHhhhcC---CeEE
Q 019012 229 DIYFDNVGGE---MLDAALLNMRDH---GRIA 254 (347)
Q Consensus 229 d~vid~~g~~---~~~~~~~~l~~~---G~~v 254 (347)
|+||.+++.. .....++++... .+++
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 9999999852 334555555443 4666
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.019 Score=53.22 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=63.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
++.+|+|+|+ |++|.+++..+... |.+|++++++.++.+.+.+..++.. .+|..+.+++.+.++ ++|+|++|
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~ 95 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL 95 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence 4578999997 99999999888877 6799999999888776652334421 345444323333333 49999999
Q ss_pred CChh-hHHHHHHhhhcCCeEEEEc
Q 019012 235 VGGE-MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 235 ~g~~-~~~~~~~~l~~~G~~v~~g 257 (347)
++.. .......++..+-.++...
T Consensus 96 tp~~~~~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFHPNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGHHHHHHHHHHHTCEEEECS
T ss_pred CchhhhHHHHHHHHhcCCEEEEee
Confidence 9864 2233445666666766643
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0065 Score=56.45 Aligned_cols=91 Identities=18% Similarity=0.176 Sum_probs=68.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.-.|.+|.|.|. |.+|..+++.++.+|++|++++++..+...+. ..|.. +. ++.+.++ ..|+|+-+
T Consensus 274 ~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~ 339 (494)
T 3d64_A 274 MIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTA 339 (494)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred ccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEEC
Confidence 357899999995 99999999999999999999999887644444 55653 21 2222222 48999999
Q ss_pred CChh-hH-HHHHHhhhcCCeEEEEccc
Q 019012 235 VGGE-ML-DAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 235 ~g~~-~~-~~~~~~l~~~G~~v~~g~~ 259 (347)
++.. .+ ...++.|+++..++.++..
T Consensus 340 ~~t~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 340 TGNYHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp SSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCcccccCHHHHhhCCCCcEEEEcCCC
Confidence 8643 23 5778899999999988864
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.018 Score=52.51 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=68.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+..|+|.|. |.+|+.+++.++..|.+|++++.++++.+.++ +.|...+ -|..+. + .+++..-..+|+++-+++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~~-~---~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATRM-D---LLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTCH-H---HHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCCH-H---HHHhcCCCccCEEEECCC
Confidence 456999996 99999999999999999999999999999998 8887422 244443 3 344433337999999998
Q ss_pred hh----hHHHHHHhhhcCCeEEEEc
Q 019012 237 GE----MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 237 ~~----~~~~~~~~l~~~G~~v~~g 257 (347)
.+ .+-...+.+.+.-+++.-.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 64 2234445555665665543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0069 Score=53.57 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=51.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH--HHHHHHcC----CC-eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV--DLLKNKLG----FD-EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~--~~~~~~~g----~~-~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
+.+|||+||+|.+|...++.+...|.+|++++++.++. +.++ .++ +. ...|..+.+.+.+.++.. .+|+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~ 78 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE 78 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence 57899999999999999998888899999999876542 2344 432 11 123555442344444432 5899
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
||.+.+
T Consensus 79 vih~A~ 84 (345)
T 2z1m_A 79 VYNLAA 84 (345)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999987
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0033 Score=52.71 Aligned_cols=73 Identities=16% Similarity=0.098 Sum_probs=49.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC-CCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~-~g~~d~vid~~g 236 (347)
++++||+||+|++|...++.+...|++|++++++++ .. ++- ....|..+.+++.+.+++.. .+++|+++.+.|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 578999999999999998888888999999998764 11 210 12245555434444444331 136899999886
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0098 Score=52.07 Aligned_cols=93 Identities=10% Similarity=0.023 Sum_probs=65.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCC-----eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFD-----EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
+||++| ++.|..+..+++.+ +.+|++++.+++-.+.+++.++.. .++.. +..+.+++...+.||+||-
T Consensus 92 rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~----Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 92 RITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD----DARMVAESFTPASRDVIIR 165 (317)
T ss_dssp EEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES----CHHHHHHTCCTTCEEEEEE
T ss_pred EEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC----cHHHHHhhccCCCCCEEEE
Confidence 899999 56678888899865 679999999999889888556531 12222 3344454443457999875
Q ss_pred CC-C----------hhhHHHHHHhhhcCCeEEEEcc
Q 019012 234 NV-G----------GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~-g----------~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. . .+.++.+.+.|+++|.++....
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 32 1 1357888999999999886543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.012 Score=52.79 Aligned_cols=97 Identities=9% Similarity=0.020 Sum_probs=63.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCe-eeecC-CHHHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDE-AFNYN-DETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~-~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.+|||+||+|.+|...++.+... |.+|++++++.++...+.+..++.. ..|.. +.+.+.+.++ ++|+||.+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~ 98 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL 98 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence 468999999999999998888777 8999999998776554431123322 23555 4423333343 49999998
Q ss_pred CChhh------------------HHHHHHhhhc-CCeEEEEccc
Q 019012 235 VGGEM------------------LDAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 235 ~g~~~------------------~~~~~~~l~~-~G~~v~~g~~ 259 (347)
.+... ....++.+++ +.++|.++..
T Consensus 99 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~ 142 (372)
T 3slg_A 99 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTS 142 (372)
T ss_dssp BCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCG
T ss_pred CccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcH
Confidence 87310 0234444433 4688888764
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.012 Score=46.94 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=67.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
....+.++.+||-.|+ |. |..+..+++.. .+|++++.+++..+.+++. .+...-+..... ++.+.+... +.
T Consensus 27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--~~ 100 (192)
T 1l3i_A 27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--PD 100 (192)
T ss_dssp HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--CC
T ss_pred HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--CC
Confidence 4457889999999995 54 88888888766 8999999999888777632 343111111111 222222211 36
Q ss_pred ccEEEeCCC----hhhHHHHHHhhhcCCeEEEEc
Q 019012 228 IDIYFDNVG----GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 228 ~d~vid~~g----~~~~~~~~~~l~~~G~~v~~g 257 (347)
+|+|+.... ...++.+.+.|+++|+++...
T Consensus 101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999997654 246788888999999998764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0091 Score=52.65 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHc----CCC-eeeecCCHHHHHHHHHHHCCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKL----GFD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
.-+++.+|||+||+|.+|...++.+...|.+|++++++..+ ...++ .+ ++. ...|..+.+.+.+.++..
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA--- 85 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence 34678999999999999999999988899999999987653 12233 32 121 123554442344444332
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+||.+.+
T Consensus 86 ~~d~Vih~A~ 95 (335)
T 1rpn_A 86 QPQEVYNLAA 95 (335)
T ss_dssp CCSEEEECCS
T ss_pred CCCEEEECcc
Confidence 5899999987
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.014 Score=51.77 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.++.+|||+||+|.+|...++.+...|.+|++++++..+ .++. ...|..+.+.+.+.+. ++|+||.+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~ 84 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIM-----GVSAVLHL 84 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHT-----TCSEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHh-----CCCEEEEC
Confidence 456789999999999999999999999999999987654 2332 2245555423333332 59999998
Q ss_pred CChh----------------hHHHHHHhhhcC--CeEEEEcc
Q 019012 235 VGGE----------------MLDAALLNMRDH--GRIAVCGM 258 (347)
Q Consensus 235 ~g~~----------------~~~~~~~~l~~~--G~~v~~g~ 258 (347)
.+.. .....++.+.+. +++|.++.
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8631 113345555443 48888876
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.022 Score=49.63 Aligned_cols=91 Identities=13% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+.+|||+||+|.+|...++.+...|.+|+++++++.+.+ +. ++.. ..|.. . +.+.+... ++|+||.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~----~~~~~~~~-~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-L----EDLINQLN-DVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-H----HHHHHHTT-TCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-H----HHHHHhhc-CCCEEEEccc
Confidence 358999999999999999999999999999999855434 33 3321 23443 3 33444433 6999999987
Q ss_pred hh--------------hHHHHHHhhhcC--CeEEEEcc
Q 019012 237 GE--------------MLDAALLNMRDH--GRIAVCGM 258 (347)
Q Consensus 237 ~~--------------~~~~~~~~l~~~--G~~v~~g~ 258 (347)
.. .....++.+... .+++.++.
T Consensus 72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 31 124455555554 46887775
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0067 Score=56.13 Aligned_cols=91 Identities=20% Similarity=0.196 Sum_probs=68.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
--.|.+|.|.|. |.+|..+++.++.+|++|++++++..+...+. ..|+. +. ++.+.++ ..|+|+-+
T Consensus 254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~~------~l~ell~-----~aDiVi~~ 319 (479)
T 1v8b_A 254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIVD-----KGDFFITC 319 (479)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-ec------CHHHHHh-----cCCEEEEC
Confidence 457899999995 99999999999999999999999887654555 56652 21 2222222 48999998
Q ss_pred CChh-hH-HHHHHhhhcCCeEEEEccc
Q 019012 235 VGGE-ML-DAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 235 ~g~~-~~-~~~~~~l~~~G~~v~~g~~ 259 (347)
.+.. .+ ...++.|+++..++.++..
T Consensus 320 ~~t~~lI~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 320 TGNVDVIKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred CChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence 7653 23 4677889999999998864
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.018 Score=53.78 Aligned_cols=82 Identities=18% Similarity=0.195 Sum_probs=56.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHh---H----HHHHHHcCCC---eeeecCCHHHHHHHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQK---V----DLLKNKLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~---~----~~~~~~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
.++++.++||+||+|++|...++.+...|+ +|+.++++... . +.++ ..|.. ...|..+.+.+...+.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~ 300 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG 300 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHH
Confidence 357889999999999999998888877799 69999987641 1 2234 45642 12455554344555554
Q ss_pred HCC-CCccEEEeCCC
Q 019012 223 CFP-QGIDIYFDNVG 236 (347)
Q Consensus 223 ~~~-g~~d~vid~~g 236 (347)
... +.+|.||.+.|
T Consensus 301 i~~~g~ld~VIh~AG 315 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAA 315 (486)
T ss_dssp SCTTSCEEEEEECCC
T ss_pred HHhcCCCcEEEECCc
Confidence 422 36899999988
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0047 Score=52.04 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec--CCHHHHHHHHHHHCC--CCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY--NDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~--~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
.++++||+||+|++|.+.++.+.. |.+|+++++++++.+.+. +..-...+.. .+. ...+.+.+... +.+|+++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~id~lv 80 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIESDIVKE-VLEEGGVDKLKNLDHVDTLV 80 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEECCHHHH-HHTSSSCGGGTTCSCCSEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceecccchH-HHHHHHHHHHHhcCCCCEEE
Confidence 368999999999999988877755 899999999998887777 4322122211 111 00011111111 3699999
Q ss_pred eCCCh
Q 019012 233 DNVGG 237 (347)
Q Consensus 233 d~~g~ 237 (347)
.+.|.
T Consensus 81 ~~Ag~ 85 (245)
T 3e9n_A 81 HAAAV 85 (245)
T ss_dssp ECC--
T ss_pred ECCCc
Confidence 99883
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.032 Score=50.78 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=66.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEECChHhHHHHHHHcC------CC-eeeecCCHHHHHHHHHHHCCCCc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHG---CYVVGSAGSSQKVDLLKNKLG------FD-EAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G---~~V~~~~~~~~~~~~~~~~~g------~~-~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.+|+|+|| |++|..+++.+...| .+|++++++.++.+.+.++++ +. ..+|..+.+++.+.+++. ++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~ 77 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KP 77 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CC
Confidence 37999998 999999999888887 499999999988776654443 21 134555442454555432 58
Q ss_pred cEEEeCCChh-hHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYFDNVGGE-MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vid~~g~~-~~~~~~~~l~~~G~~v~~g 257 (347)
|+||+|++.. ....+..++..+-+++.+.
T Consensus 78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~a 107 (405)
T 4ina_A 78 QIVLNIALPYQDLTIMEACLRTGVPYLDTA 107 (405)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHTCCEEESS
T ss_pred CEEEECCCcccChHHHHHHHHhCCCEEEec
Confidence 9999999863 4445556677777777653
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0026 Score=53.62 Aligned_cols=76 Identities=17% Similarity=0.126 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKL-HGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~-~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+++++||+||++++|.+.++.+.. .|++|++++++++ ..+ ..- ....|..+.+++.+.++....+.+|+++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n 77 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NLK-FIKADLTKQQDITNVLDIIKNVSFDGIFLN 77 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TEE-EEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cce-EEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence 467899999999999988876655 7889999887654 211 110 123455554345555544433479999999
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
.|.
T Consensus 78 Ag~ 80 (244)
T 4e4y_A 78 AGI 80 (244)
T ss_dssp CCC
T ss_pred Ccc
Confidence 883
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0092 Score=49.00 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=69.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
....+.++++||.+|+ | .|..+..+++..| .+|++++.+++..+.+++. .|...+ ..... +....+. ..
T Consensus 71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~~~~~--~~ 144 (215)
T 2yxe_A 71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG-DGTLGYE--PL 144 (215)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES-CGGGCCG--GG
T ss_pred HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC-CcccCCC--CC
Confidence 4567889999999995 5 6888999998886 7999999999887777632 243321 11110 1110111 02
Q ss_pred CCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcc
Q 019012 226 QGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+.+..-. ..+.+.+.|+++|+++..-.
T Consensus 145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred CCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence 3699999876643 45788899999999987643
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.02 Score=50.02 Aligned_cols=75 Identities=11% Similarity=0.179 Sum_probs=50.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
..+-.+|||+||+|.+|...++.+...|.+|++++++..+ + .+++.. ..|..+.+.+.+.++. +.+|+||.
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih 80 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH 80 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence 3566799999999999999999998899999999987654 2 123221 2355544233333432 25899999
Q ss_pred CCCh
Q 019012 234 NVGG 237 (347)
Q Consensus 234 ~~g~ 237 (347)
+.+.
T Consensus 81 ~A~~ 84 (321)
T 2pk3_A 81 LAAK 84 (321)
T ss_dssp CCSC
T ss_pred cCcc
Confidence 9873
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.015 Score=50.93 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=60.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHH--HHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLK--NKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~--~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+|||+||+|.+|...++.+...|.+|++++++.. +.+.+. ...|+.. ..|..+.+++.+.++ ++|+||.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-----~~d~vi~~ 86 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-----KVDVVISA 86 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----TCSEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-----CCCEEEEC
Confidence 47999999999999999999889999999998764 333322 0345532 245555423333332 49999999
Q ss_pred CChh---hHHHHHHhhhcC---CeEE
Q 019012 235 VGGE---MLDAALLNMRDH---GRIA 254 (347)
Q Consensus 235 ~g~~---~~~~~~~~l~~~---G~~v 254 (347)
++.. .....++.+... ++++
T Consensus 87 a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 87 LAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 9842 344555655543 3666
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.041 Score=45.34 Aligned_cols=74 Identities=9% Similarity=-0.016 Sum_probs=55.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee--ecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF--NYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+..|.. ++ |..+. +.+++..-.++|+++-+++.
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~----~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHK----EILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSH----HHHHHHTCCTTCEEEECCSC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCH----HHHHhcCcccCCEEEEecCC
Confidence 4899996 99999999999999999999999999888776356653 33 33332 23444333479999999997
Q ss_pred hh
Q 019012 238 EM 239 (347)
Q Consensus 238 ~~ 239 (347)
+.
T Consensus 76 d~ 77 (218)
T 3l4b_C 76 DE 77 (218)
T ss_dssp HH
T ss_pred cH
Confidence 53
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.015 Score=50.70 Aligned_cols=92 Identities=13% Similarity=0.061 Sum_probs=51.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+.+|||+||+|.+|...++.+...|.+|++++++..+ . . ....|..+.+.+.+.++.. .+|+||.+.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence 4689999999999999999988889999999876543 1 1 1112322221233333322 58999998873
Q ss_pred hh------------------HHHHHHhhh-cCCeEEEEcccc
Q 019012 238 EM------------------LDAALLNMR-DHGRIAVCGMVS 260 (347)
Q Consensus 238 ~~------------------~~~~~~~l~-~~G~~v~~g~~~ 260 (347)
.. ....++.+. .+++++.++...
T Consensus 71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 112 (315)
T 2ydy_A 71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY 112 (315)
T ss_dssp -----------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence 11 122334333 367888877643
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.017 Score=49.47 Aligned_cols=91 Identities=15% Similarity=0.059 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC--CeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF--DEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.+++++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++. ..++... ++ . ...+|++|+
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l----~---~~~~DivIn 187 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---AL----E---GQSFDIVVN 187 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GG----T---TCCCSEEEE
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hh----c---ccCCCEEEE
Confidence 6889999997 9999999999989997 999999999887776646653 1223222 11 1 136999999
Q ss_pred CCChhhHH----HHHHhhhcCCeEEEEcc
Q 019012 234 NVGGEMLD----AALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g~~~~~----~~~~~l~~~G~~v~~g~ 258 (347)
|+...... .....++++..++.+..
T Consensus 188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY 216 (272)
T 3pwz_A 188 ATSASLTADLPPLPADVLGEAALAYELAY 216 (272)
T ss_dssp CSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred CCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence 98743211 01234666666665543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.023 Score=50.65 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=61.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH--HHHHHHc-CCCe-eee-cCCHHHHHHHHHHHCCCCccEEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV--DLLKNKL-GFDE-AFN-YNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~--~~~~~~~-g~~~-vi~-~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+.+|||+||+|.+|...++.+...|.+|++++++.++. +.+. .. ++.. ..| ..+.+++.+.++ ++|+||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~~-----~~d~Vi 78 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLFE-----GAHLAF 78 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHHT-----TCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHHh-----cCCEEE
Confidence 46799999999999999988888899999999887654 3333 22 3321 235 444423333222 489999
Q ss_pred eCCChh------hHHHHHHhhhc-C--CeEEEEccc
Q 019012 233 DNVGGE------MLDAALLNMRD-H--GRIAVCGMV 259 (347)
Q Consensus 233 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~ 259 (347)
.+.+.. .....++.+.. + +++|.++..
T Consensus 79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 776531 22445555544 3 588888764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0094 Score=53.14 Aligned_cols=76 Identities=22% Similarity=0.331 Sum_probs=52.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCC-eeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFD-EAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+.+|||+||+|.+|...++.+...|.+|++++++..+.+.+.+.+ ++. ...|..+.+.+.+.++.. .+|+||
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi 85 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF 85 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence 578999999999999999999889999999998765433332122 221 123555542333334322 589999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
.+.+
T Consensus 86 h~A~ 89 (357)
T 1rkx_A 86 HMAA 89 (357)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9988
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.015 Score=54.95 Aligned_cols=82 Identities=13% Similarity=0.048 Sum_probs=55.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEE-ECCh-------------H----hHHHHHHHcCCC---eeeecC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGS-AGSS-------------Q----KVDLLKNKLGFD---EAFNYN 211 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~-~~~~-------------~----~~~~~~~~~g~~---~vi~~~ 211 (347)
.++++.++||+||+|++|...++.+...|++ |+.+ .++. + ..+.++ +.|.. ...|..
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT 325 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence 3578899999999999999988888778995 6666 6662 2 123344 45653 124555
Q ss_pred CHHHHHHHHHHHCC-CCccEEEeCCC
Q 019012 212 DETDLVAALKRCFP-QGIDIYFDNVG 236 (347)
Q Consensus 212 ~~~~~~~~i~~~~~-g~~d~vid~~g 236 (347)
+.+.+...+.+... +.+|.||.+.|
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~AG 351 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLPP 351 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 55345555554432 37999999988
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.016 Score=46.28 Aligned_cols=98 Identities=20% Similarity=0.168 Sum_probs=66.5
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC--eeeecCCHHHHHHHHHHHCCCC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD--EAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
..++++++||=.|+ +.|..++.+++. +.+|++++.+++..+.+++. .|.. .++..... .+....++.
T Consensus 18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~-----~l~~~~~~~ 89 (185)
T 3mti_A 18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHE-----NLDHYVREP 89 (185)
T ss_dssp TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGG-----GGGGTCCSC
T ss_pred HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHH-----HHHhhccCC
Confidence 45788999999984 458888888887 88999999999887777632 3432 22321111 122233347
Q ss_pred ccEEEeCCC-------------h---hhHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFDNVG-------------G---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~g-------------~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
||+|+-+.+ . ..++.+.+.|+++|+++.+..
T Consensus 90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 999976531 1 245788899999999988754
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.055 Score=48.13 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|.|+|- |.+|...++.++..|++|++.+++.. .+.+. +.|+..+ . ++.+.+++ .|+|+-++.
T Consensus 159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~-~~g~~~~----~--~l~ell~~-----aDiV~l~~P 224 (352)
T 3gg9_A 159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENS-KERAR-ADGFAVA----E--SKDALFEQ-----SDVLSVHLR 224 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHH-HHHHH-HTTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCC-HHHHH-hcCceEe----C--CHHHHHhh-----CCEEEEecc
Confidence 5789999994 99999999999999999999997753 35555 6776421 1 33334443 788888775
Q ss_pred h-h-----hHHHHHHhhhcCCeEEEEc
Q 019012 237 G-E-----MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 237 ~-~-----~~~~~~~~l~~~G~~v~~g 257 (347)
. + .-...+..|+++..++.++
T Consensus 225 lt~~t~~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 225 LNDETRSIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp CSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred CcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 2 1 2246777888888888887
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.015 Score=50.48 Aligned_cols=95 Identities=19% Similarity=0.072 Sum_probs=61.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhH--HHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKV--DLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~--~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
..+|||+||+|.+|...++.+...| .+|++++++.++. +.+. ..++.. ..|..+.+++.+.+ . ++|+||.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~~~l~~~~----~-~~d~vi~ 78 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQVIMELAL----N-GAYATFI 78 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCHHHHHHHH----T-TCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCHHHHHHHH----h-cCCEEEE
Confidence 4689999999999999998887778 8999999987653 2333 445532 24555542333333 2 4999999
Q ss_pred CCChh----------hHHHHHHhhhcC--CeEEEEcc
Q 019012 234 NVGGE----------MLDAALLNMRDH--GRIAVCGM 258 (347)
Q Consensus 234 ~~g~~----------~~~~~~~~l~~~--G~~v~~g~ 258 (347)
+.+.. .....++.+... ++++..+.
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 98731 123444555442 57877543
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.014 Score=50.30 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=68.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCCeeeecCCHHHHHHHHHHHCCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
...++.++.+||-+|+ +.|..+..+++..|++|++++.+++..+.+++.+ |...-+..... ++ .++. +.
T Consensus 58 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~-~~ 129 (287)
T 1kpg_A 58 GKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQFD-EP 129 (287)
T ss_dssp TTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGCC-CC
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Ch----hhCC-CC
Confidence 4566789999999994 3488888899777999999999999888877332 32111111111 11 1122 56
Q ss_pred ccEEEeCC-----C----hhhHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFDNV-----G----GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~-----g----~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
||+|+... + ...++.+.+.|+++|+++....
T Consensus 130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99998642 2 1357888999999999987654
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0064 Score=52.54 Aligned_cols=92 Identities=15% Similarity=0.165 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc----CC---------C--eeeecCCHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL----GF---------D--EAFNYNDETDLVAA 219 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~----g~---------~--~vi~~~~~~~~~~~ 219 (347)
.++.+||.+| ++.|..+..+++. +. +|++++.+++-.+.+++.+ +. . .++.. +..+.
T Consensus 74 ~~~~~VLdiG--~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~----D~~~~ 146 (281)
T 1mjf_A 74 PKPKRVLVIG--GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG----DGFEF 146 (281)
T ss_dssp SCCCEEEEEE--CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES----CHHHH
T ss_pred CCCCeEEEEc--CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC----chHHH
Confidence 4568999999 4457777788877 65 9999999999888888545 21 1 12222 33333
Q ss_pred HHHHCCCCccEEEe-CCC----------hhhHHHHHHhhhcCCeEEEE
Q 019012 220 LKRCFPQGIDIYFD-NVG----------GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 220 i~~~~~g~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~ 256 (347)
+.. .+.||+|+- ... .+.++.+.+.|+++|.++..
T Consensus 147 l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 147 IKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp HHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 443 457999874 321 23578889999999999875
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.021 Score=49.13 Aligned_cols=71 Identities=13% Similarity=0.103 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC---CeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF---DEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
-.+++++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++. ..+.+..+ +. ..+|+|
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~----------l~-~~aDiI 191 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ----------LK-QSYDVI 191 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------CC-SCEEEE
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH----------hc-CCCCEE
Confidence 36889999997 9999999998888997 999999999887766545543 12332221 11 369999
Q ss_pred EeCCChh
Q 019012 232 FDNVGGE 238 (347)
Q Consensus 232 id~~g~~ 238 (347)
|+|++..
T Consensus 192 InaTp~g 198 (281)
T 3o8q_A 192 INSTSAS 198 (281)
T ss_dssp EECSCCC
T ss_pred EEcCcCC
Confidence 9999743
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0095 Score=48.16 Aligned_cols=99 Identities=21% Similarity=0.223 Sum_probs=66.9
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHH---cCC-C--eeeecCCHHHHHHHHHHHC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNK---LGF-D--EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~---~g~-~--~vi~~~~~~~~~~~i~~~~ 224 (347)
..++++++||-.|+ | .|..+..+++..+ .+|++++.+++..+.+++. .|. . .++..+-. + +....
T Consensus 18 ~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~----~~~~~ 90 (197)
T 3eey_A 18 MFVKEGDTVVDATC-G-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQ-N----MDKYI 90 (197)
T ss_dssp HHCCTTCEEEESCC-T-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGG-G----GGGTC
T ss_pred hcCCCCCEEEEcCC-C-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH-H----Hhhhc
Confidence 45688999999984 4 4888888898864 5999999999887777632 233 1 22222211 1 11122
Q ss_pred CCCccEEEeCCCh----------------hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVGG----------------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|+-..+- ..+..+.+.|+++|+++....
T Consensus 91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 3479999854421 367888999999999987754
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.01 Score=49.60 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCC-Cee--e--ecCCHHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGF-DEA--F--NYNDETDLVAALKRC 223 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~-~~v--i--~~~~~~~~~~~i~~~ 223 (347)
....++||++||=+|+ +.|..+..+|+..|. +|++++.+++..+.+++.... ..+ + +...+ . .. ..
T Consensus 71 ~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p-~---~~-~~ 143 (233)
T 4df3_A 71 IELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP-E---KY-RH 143 (233)
T ss_dssp SCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG-G---GG-TT
T ss_pred hhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc-c---cc-cc
Confidence 4467899999999994 568888899998875 899999999988877733221 111 2 12221 0 00 11
Q ss_pred CCCCccEEEeCCCh-----hhHHHHHHhhhcCCeEEEE
Q 019012 224 FPQGIDIYFDNVGG-----EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 224 ~~g~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~ 256 (347)
..+.+|+||..... ..+.++.+.|+++|+++..
T Consensus 144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 12368988765442 2577888999999999875
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0081 Score=50.79 Aligned_cols=80 Identities=18% Similarity=0.228 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ECChHhHHHHHH---HcCCC-e--eeecCCHHHHH---HHHHHHC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS-AGSSQKVDLLKN---KLGFD-E--AFNYNDETDLV---AALKRCF-- 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~-~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~---~~i~~~~-- 224 (347)
+++++||+||++++|.+.++.+...|++|+++ .++.++.+.+.+ +.+.. . ..|..+.++.. +.+.+..
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 57899999999999999999999999999886 445444443321 22321 1 13444431222 2222211
Q ss_pred --C-CCccEEEeCCC
Q 019012 225 --P-QGIDIYFDNVG 236 (347)
Q Consensus 225 --~-g~~d~vid~~g 236 (347)
. +.+|+++.+.|
T Consensus 86 ~~~~~~id~lv~nAg 100 (255)
T 3icc_A 86 RTGSTKFDILINNAG 100 (255)
T ss_dssp HHSSSCEEEEEECCC
T ss_pred cccCCcccEEEECCC
Confidence 1 25999999987
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.015 Score=50.85 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=69.8
Q ss_pred hhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHH
Q 019012 151 EVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 151 ~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~ 223 (347)
.... +.++++||-+|+ +.|..+..+++..|++|++++.+++..+.+++. .|.. .++..+-. ++ .+
T Consensus 110 ~~l~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-----~~ 181 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DT-----PF 181 (312)
T ss_dssp TTSCCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CC
T ss_pred HHhccCCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cC-----CC
Confidence 3344 788999999994 458888888888789999999999888777632 3432 12222111 10 01
Q ss_pred CCCCccEEEeCCC------hhhHHHHHHhhhcCCeEEEEcccc
Q 019012 224 FPQGIDIYFDNVG------GEMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 224 ~~g~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
..+.||+|+.... ...++.+.+.|+++|+++......
T Consensus 182 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 2247999986433 246888999999999999877543
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.011 Score=50.46 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=61.3
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC
Q 019012 145 AYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 145 a~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
+...|.+..---.|.+++|.|+++.+|..+++++...|++|+++.+... ++.+.++
T Consensus 147 v~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~~~~~--- 202 (285)
T 3p2o_A 147 VMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DLSLYTR--- 202 (285)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHHT---
T ss_pred HHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHhh---
Confidence 3444433333358999999998677999999999999999888764322 2222333
Q ss_pred CCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccc
Q 019012 225 PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 225 ~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
.+|++|.++|...+ ---+.++++..++.+|...
T Consensus 203 --~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 203 --QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR 235 (285)
T ss_dssp --TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred --cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence 38999999996532 1225578888888888643
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.013 Score=50.09 Aligned_cols=88 Identities=22% Similarity=0.194 Sum_probs=60.2
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC
Q 019012 145 AYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 145 a~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
+...|.+..---.|.+++|.|+++.+|..+++++...|++|+++.+... ++.+.++
T Consensus 148 v~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~~~~~--- 203 (285)
T 3l07_A 148 IMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------DLKSHTT--- 203 (285)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------SHHHHHT---
T ss_pred HHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHhcc---
Confidence 3344433333358999999998666999999999999999887653211 2222333
Q ss_pred CCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 225 PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 225 ~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.+|++|.++|...+ -.-+.++++-.++.+|..
T Consensus 204 --~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~ 235 (285)
T 3l07_A 204 --KADILIVAVGKPNF-ITADMVKEGAVVIDVGIN 235 (285)
T ss_dssp --TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred --cCCEEEECCCCCCC-CCHHHcCCCcEEEEeccc
Confidence 38999999996532 122457888888888864
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0071 Score=53.38 Aligned_cols=103 Identities=9% Similarity=-0.035 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-CCC-eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-GFD-EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
-.+.+|||+||+|.+|...++.+...|.+|++++++......+.+.+ ++. ...|..+.+.+.+.+++. ++|+||.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih 94 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH 94 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence 34578999999999999999988888999999998644321111022 111 123555542344444433 5999999
Q ss_pred CCChhh---------------HHHHHHhhhc--CCeEEEEccccc
Q 019012 234 NVGGEM---------------LDAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 234 ~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
+++... ....++.+.+ .+++|.++....
T Consensus 95 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~ 139 (330)
T 2pzm_A 95 SAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALC 139 (330)
T ss_dssp CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGG
T ss_pred CCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHH
Confidence 987310 1223333332 368998876533
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.21 Score=44.19 Aligned_cols=90 Identities=17% Similarity=0.216 Sum_probs=59.5
Q ss_pred CEEEEEcCCchHHHHHHHHHH-HC-CCEEE-EEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAK-LH-GCYVV-GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~-~~-G~~V~-~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-+|.|+|+ |.+|...++.++ .. +++++ +.++++++.+.+.+++|+..+. . ++.+.+. ...+|+|+.|+
T Consensus 9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~--~---~~~~~l~---~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTY--T---NYKDMID---TENIDAIFIVA 79 (346)
T ss_dssp EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEE--S---CHHHHHT---TSCCSEEEECS
T ss_pred ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCccc--C---CHHHHhc---CCCCCEEEEeC
Confidence 47999996 999998888776 44 77765 4566667766555367875433 2 2222221 12699999999
Q ss_pred Ch-hhHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. .+.+.+..+++.+ +-|.+..
T Consensus 80 p~~~h~~~~~~al~~G-~~v~~eK 102 (346)
T 3cea_A 80 PTPFHPEMTIYAMNAG-LNVFCEK 102 (346)
T ss_dssp CGGGHHHHHHHHHHTT-CEEEECS
T ss_pred ChHhHHHHHHHHHHCC-CEEEEcC
Confidence 86 4677888888775 4444543
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.017 Score=49.25 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=63.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+++++|+|+ |+.|.+++..+...|.+|+++.++.++.+.+. ++++. +....+ + ..+|+||+|+..
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~---l---------~~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPP---K---------SAFDLIINATSA 182 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCC---S---------SCCSEEEECCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHH---h---------ccCCEEEEcccC
Confidence 889999996 99999999999999999999999999888887 78853 333322 1 159999999873
Q ss_pred h-----hH--HHHHHhhhcCCeEEEEcc
Q 019012 238 E-----ML--DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 238 ~-----~~--~~~~~~l~~~G~~v~~g~ 258 (347)
. .+ +.....++++..++.+..
T Consensus 183 Gm~~~~~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 183 SLHNELPLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred CCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence 2 12 122236777777776654
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.019 Score=47.00 Aligned_cols=96 Identities=15% Similarity=0.065 Sum_probs=67.5
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCCCCccE
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE--AFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
..+.++.+||-+|+ +.|..+..+++. |.+|++++.++...+.++ +.+... ++..+-. + + ...+.||+
T Consensus 42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~~d~~-~----~--~~~~~~D~ 110 (218)
T 3ou2_A 42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQQDLF-D----W--TPDRQWDA 110 (218)
T ss_dssp TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEECCTT-S----C--CCSSCEEE
T ss_pred hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEecccc-c----C--CCCCceeE
Confidence 44778889999994 347788888877 889999999999999998 666332 2222111 1 1 12347999
Q ss_pred EEeCCCh---------hhHHHHHHhhhcCCeEEEEccc
Q 019012 231 YFDNVGG---------EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 231 vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
|+-...- ..++.+.+.|+++|+++.....
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9865431 2467788899999999887653
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.023 Score=49.01 Aligned_cols=64 Identities=8% Similarity=0.131 Sum_probs=45.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-++..+|||+||+|.+|...++.+...|.+|++++++. .|..+.+.+.+.+++. ++|+||.+
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~ 70 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC 70 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence 35667999999999999999999888899999998751 2333322343344322 58999998
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.+
T Consensus 71 A~ 72 (292)
T 1vl0_A 71 AA 72 (292)
T ss_dssp CC
T ss_pred Cc
Confidence 87
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.023 Score=49.75 Aligned_cols=88 Identities=19% Similarity=0.171 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+|.|+|. |.+|...++.++..|++|++.+++.++. .+. ++|+.. . ++.+.+++ .|+|+.++
T Consensus 140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~-~------~l~ell~~-----aDvVvl~~ 204 (313)
T 2ekl_A 140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKA-V------SLEELLKN-----SDVISLHV 204 (313)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEE-C------CHHHHHHH-----CSEEEECC
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCcee-c------CHHHHHhh-----CCEEEEec
Confidence 46789999995 9999999999999999999999887663 455 777642 1 22233332 79999888
Q ss_pred Chh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 236 GGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
... .+ ...+..|++++.++.++.
T Consensus 205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence 631 22 567788888888888765
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.013 Score=51.35 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC------CeeeecCCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF------DEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.++.+||++| ++.|..+..+++..+ .+|++++.+++-.+.+++.+.. +.-+..... +..+.+.. ..+.|
T Consensus 107 ~~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f 182 (314)
T 2b2c_A 107 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF 182 (314)
T ss_dssp SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred CCCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence 3567999999 456777888887764 5999999999988888844421 111111111 33334443 34479
Q ss_pred cEEEeCCC-----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYFDNVG-----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
|+|+-... .+.++.+.+.|+++|.++.-.
T Consensus 183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 99984331 245778889999999998754
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.015 Score=51.92 Aligned_cols=111 Identities=16% Similarity=0.114 Sum_probs=70.4
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECC----hHh---------HHHHHHH
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS----SQK---------VDLLKNK 201 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~----~~~---------~~~~~~~ 201 (347)
.+....++..+.++.....--++.+|+|.|| |..|..+++++..+|+ +|++++++ .+| ..+++ +
T Consensus 170 GTasV~lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~-~ 247 (388)
T 1vl6_A 170 GTAVVVSAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR-I 247 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH-T
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH-h
Confidence 3333344445555533332346789999997 9999999999999999 89999987 443 23333 3
Q ss_pred cCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcc
Q 019012 202 LGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 202 ~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
... . .... ++.+.++ ++|++|-+++.. .-++.++.|+++-.++.+..
T Consensus 248 ~~~---~-~~~~-~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN 295 (388)
T 1vl6_A 248 TNP---E-RLSG-DLETALE-----GADFFIGVSRGNILKPEWIKKMSRKPVIFALAN 295 (388)
T ss_dssp SCT---T-CCCS-CHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred hhc---c-Cchh-hHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence 221 0 1111 4555554 389999988843 34566677877665555544
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.013 Score=51.80 Aligned_cols=88 Identities=15% Similarity=0.170 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+|.|+| .|.+|...++.++..|.+|++.+++.++ +.+. ++|+.. . ++.+.++ ..|+|+.++
T Consensus 163 l~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~ 227 (335)
T 2g76_A 163 LNGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWP-----LCDFITVHT 227 (335)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGG-----GCSEEEECC
T ss_pred CCcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHh-----cCCEEEEec
Confidence 4678999999 5999999999999999999999987665 4555 777642 1 2222222 379999887
Q ss_pred Chh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 236 GGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
... .+ ...+..|++++.++.++.
T Consensus 228 P~t~~t~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 228 PLLPSTTGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp CCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred CCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 642 22 467788888888888875
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.039 Score=45.17 Aligned_cols=88 Identities=11% Similarity=0.009 Sum_probs=58.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC-----CCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG-----FDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+|+|+||+|.+|...+..+...|.+|++.++++++.+.+.+.++ .+ +... ++.+.++ ++|+||.|
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~-----~~D~Vi~~ 71 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITGM---KNEDAAE-----ACDIAVLT 71 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEEE---EHHHHHH-----HCSEEEEC
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CChh---hHHHHHh-----cCCEEEEe
Confidence 58899977999999888888889999999999887776663344 11 1111 3333343 38999999
Q ss_pred CChhhHHHHHHhhh---cCCeEEEEc
Q 019012 235 VGGEMLDAALLNMR---DHGRIAVCG 257 (347)
Q Consensus 235 ~g~~~~~~~~~~l~---~~G~~v~~g 257 (347)
+........++.+. ++..++.+.
T Consensus 72 ~~~~~~~~~~~~l~~~~~~~~vi~~~ 97 (212)
T 1jay_A 72 IPWEHAIDTARDLKNILREKIVVSPL 97 (212)
T ss_dssp SCHHHHHHHHHHTHHHHTTSEEEECC
T ss_pred CChhhHHHHHHHHHHHcCCCEEEEcC
Confidence 98654444443322 344555554
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0047 Score=54.80 Aligned_cols=102 Identities=18% Similarity=0.139 Sum_probs=66.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHHcC--------------CC--eeeecCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNKLG--------------FD--EAFNYND 212 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~~g--------------~~--~vi~~~~ 212 (347)
....+.++++||-.|+ |+ |..++.+++..| .+|++++.++...+.+++.+. .. .++..+-
T Consensus 99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~ 176 (336)
T 2b25_A 99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI 176 (336)
T ss_dssp HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence 4457899999999994 54 888888888866 699999999988777763221 01 1222211
Q ss_pred HHHHHHHHHHHCCCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 213 ETDLVAALKRCFPQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 213 ~~~~~~~i~~~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.+..+..+.||+|+-.... ..+..+.++|+++|+++.+..
T Consensus 177 ----~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 177 ----SGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----TCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred ----HHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 111111122369999865554 368899999999999997654
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.03 Score=46.36 Aligned_cols=93 Identities=9% Similarity=0.034 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.|.+|||.|| |.+|...++.+...|++|++++.... .++.+.++.++. .+...-. . ..+ .++|+||-+
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~-~i~~~~~-~--~dL-----~~adLVIaA 98 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLR-VKRKKVG-E--EDL-----LNVFFIVVA 98 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCE-EECSCCC-G--GGS-----SSCSEEEEC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcE-EEECCCC-H--hHh-----CCCCEEEEC
Confidence 35789999997 99999999999999999999886543 333333122232 2211100 0 001 269999999
Q ss_pred CChhhHHHHHHhhhcCCeEEEEcc
Q 019012 235 VGGEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
++.+..+..+...++.|..|....
T Consensus 99 T~d~~~N~~I~~~ak~gi~VNvvD 122 (223)
T 3dfz_A 99 TNDQAVNKFVKQHIKNDQLVNMAS 122 (223)
T ss_dssp CCCTHHHHHHHHHSCTTCEEEC--
T ss_pred CCCHHHHHHHHHHHhCCCEEEEeC
Confidence 998766666665566888877654
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.014 Score=49.33 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=30.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
+.+|+|.|+ |++|..+++.+...|. ++++++.+.
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 468999996 9999999999999998 899998876
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.021 Score=47.73 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=65.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.++++.+||=+|+ +.|..+..+++. |++|++++.+++..+.++ +. . .++.. +..+.+..+..+.||+|+-
T Consensus 38 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~-~-~~~~~----d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 38 YFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK-F-NVVKS----DAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp GTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT-S-EEECS----CHHHHHHTSCTTCBSEEEE
T ss_pred hhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh-c-ceeec----cHHHHhhhcCCCCeeEEEE
Confidence 4578899999994 456666677765 889999999999888888 44 2 22222 2222233334458999986
Q ss_pred CCC-----h----hhHHHHHHhhhcCCeEEEEcc
Q 019012 234 NVG-----G----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
... . ..++.+.+.|+++|+++....
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 432 1 257788889999999987543
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0098 Score=52.68 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHc-----CC--C--eeeecCCHHHHHHHHHHHC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKL-----GF--D--EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~-----g~--~--~vi~~~~~~~~~~~i~~~~ 224 (347)
..++.+||.+| ++.|..+..+++..+ .+|++++.+++-.+.+++.+ |. . .++.. +..+.+....
T Consensus 118 ~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~----D~~~~l~~~~ 191 (334)
T 1xj5_A 118 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAFLKNAA 191 (334)
T ss_dssp SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHHHHTSC
T ss_pred CCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC----CHHHHHHhcc
Confidence 35678999999 456777888888764 59999999999888887433 21 1 12222 3333344333
Q ss_pred CCCccEEEeCCC-----------hhhHHHHHHhhhcCCeEEEE
Q 019012 225 PQGIDIYFDNVG-----------GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 225 ~g~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~ 256 (347)
.+.||+|+-... ...++.+.+.|+++|.++.-
T Consensus 192 ~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 192 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 347999985321 13577888999999999885
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.013 Score=52.66 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=49.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-----HHHHHHHc------CCC-eeeecCCHHHHHHHHHHHCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-----VDLLKNKL------GFD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-----~~~~~~~~------g~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
.+|||+||+|.+|...++.+...|.+|++++++..+ .+.+.+.. ++. ...|..+.+.+.+.++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 589999999999999999998899999999987643 11110000 221 123555442344444332
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+||.+.+
T Consensus 106 ~~d~Vih~A~ 115 (381)
T 1n7h_A 106 KPDEVYNLAA 115 (381)
T ss_dssp CCSEEEECCS
T ss_pred CCCEEEECCc
Confidence 5899999987
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.032 Score=55.41 Aligned_cols=82 Identities=20% Similarity=0.197 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHH-HCCC-EEEEEECChH---h----HHHHHHHcCCCe---eeecCCHHHHHHHHHH
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAK-LHGC-YVVGSAGSSQ---K----VDLLKNKLGFDE---AFNYNDETDLVAALKR 222 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~-~~G~-~V~~~~~~~~---~----~~~~~~~~g~~~---vi~~~~~~~~~~~i~~ 222 (347)
+.++.++||+||+|++|++.++.+. ..|+ +|+.++++.. + .+.++ ..|... .+|-.+.+++...+.+
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~ 605 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS 605 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence 4678999999999999999888776 7899 6999998832 2 23333 456532 2466665455555655
Q ss_pred HCCC-CccEEEeCCCh
Q 019012 223 CFPQ-GIDIYFDNVGG 237 (347)
Q Consensus 223 ~~~g-~~d~vid~~g~ 237 (347)
.... .+|++|++.|.
T Consensus 606 ~~~~~~id~lVnnAGv 621 (795)
T 3slk_A 606 IPDEHPLTAVVHAAGV 621 (795)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred HHHhCCCEEEEECCCc
Confidence 5433 79999999883
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.036 Score=49.02 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=50.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----------HhHHHHHHHcC--CC-eeeecCCHHHHHHHHHHHC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----------QKVDLLKNKLG--FD-EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----------~~~~~~~~~~g--~~-~vi~~~~~~~~~~~i~~~~ 224 (347)
+.+|||+||+|.+|...++.+...|.+|++++++. +..+.+.+..+ +. ...|..+.+.+.+.+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 46899999999999999998888899999998642 23333431123 22 123555542344444431
Q ss_pred CCCccEEEeCCC
Q 019012 225 PQGIDIYFDNVG 236 (347)
Q Consensus 225 ~g~~d~vid~~g 236 (347)
++|+||.+.+
T Consensus 81 --~~d~vih~A~ 90 (348)
T 1ek6_A 81 --SFMAVIHFAG 90 (348)
T ss_dssp --CEEEEEECCS
T ss_pred --CCCEEEECCC
Confidence 5999999987
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.022 Score=50.98 Aligned_cols=81 Identities=15% Similarity=0.098 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcCCchHHHH-HHHHHHHCCCEEEEEECChHh----------------HHHHHHHcCCCe-e--eecCCHH
Q 019012 155 PKSGEYVFVSAASGAVGQL-VGQLAKLHGCYVVGSAGSSQK----------------VDLLKNKLGFDE-A--FNYNDET 214 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~-ai~la~~~G~~V~~~~~~~~~----------------~~~~~~~~g~~~-v--i~~~~~~ 214 (347)
...++++||+||++++|++ ++.+|...|+.++.+....+. .+.++ +.|... . .|..+++
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~-~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAK-REGLYSVTIDGDAFSDE 125 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HHTCCEEEEESCTTSHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHH-HcCCCceeEeCCCCCHH
Confidence 3567899999999999987 456676779998888765421 13445 566532 2 3444432
Q ss_pred ---HHHHHHHHHCCCCccEEEeCCCh
Q 019012 215 ---DLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 215 ---~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
...+.+++. .|++|+++.+.+.
T Consensus 126 ~i~~vi~~i~~~-~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 126 IKAQVIEEAKKK-GIKFDLIVYSLAS 150 (401)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEECCCC
T ss_pred HHHHHHHHHHHh-cCCCCEEEEeccc
Confidence 233444443 3579999998884
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.014 Score=49.70 Aligned_cols=97 Identities=10% Similarity=0.184 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEECChHhHHHHHHHc---CCCeeeecCCHHHHHHHHHHHCCCCc
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLH---GCYVVGSAGSSQKVDLLKNKL---GFDEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~---G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
+++|.+||=+|+ +.|..+..+++.. |++|++++.+++-.+.+++.+ +...-+..... + +.++..+.+
T Consensus 68 ~~~~~~vLDlGc--GtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D----~~~~~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-D----IRDIAIENA 140 (261)
T ss_dssp CCTTCEEEEETC--TTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-C----TTTCCCCSE
T ss_pred CCCCCEEEEEeC--CCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-c----ccccccccc
Confidence 689999999994 5677788888764 679999999999888877432 33211111111 1 122223468
Q ss_pred cEEEeCCCh---------hhHHHHHHhhhcCCeEEEEcc
Q 019012 229 DIYFDNVGG---------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 229 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+|+-...- ..+++..+.|+|||+++....
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 888754321 157888999999999998654
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.095 Score=47.44 Aligned_cols=117 Identities=20% Similarity=0.245 Sum_probs=76.1
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH----------HcCC-
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN----------KLGF- 204 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~----------~~g~- 204 (347)
.+.......+..+.....++++++||=+| .|.|..++++|+..|+ +|++++.++.-.+.+++ .+|.
T Consensus 153 vYGEt~~~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~ 230 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK 230 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred ccCCCCHHHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33334445555566778899999999998 5678899999998898 69999999865444431 2343
Q ss_pred -Ce--eee--cCCHHHHHHHHHHHCCCCccEEEeCC---Ch---hhHHHHHHhhhcCCeEEEEccccc
Q 019012 205 -DE--AFN--YNDETDLVAALKRCFPQGIDIYFDNV---GG---EMLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 205 -~~--vi~--~~~~~~~~~~i~~~~~g~~d~vid~~---g~---~~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
.. ++. ..+. .+...+. .+|+||-.. .. ..+.+.++.|++||++++......
T Consensus 231 ~~rVefi~GD~~~l-p~~d~~~-----~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 231 HAEYTLERGDFLSE-EWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CCEEEEEECCTTSH-HHHHHHH-----TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CCCeEEEECcccCC-ccccccC-----CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 22 222 2222 3322222 489998432 12 256677888999999998765443
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0079 Score=52.57 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=64.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcC-----C--C--eeeecCCHHHHHHHHHHHC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLG-----F--D--EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g-----~--~--~vi~~~~~~~~~~~i~~~~ 224 (347)
..++.+||++| ++.|..+..+++..+ .+|++++.+++-.+.+++.+. . . .++.. +..+.+.. .
T Consensus 93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~----Da~~~l~~-~ 165 (304)
T 2o07_A 93 HPNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG----DGFEFMKQ-N 165 (304)
T ss_dssp SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHHHT-C
T ss_pred CCCCCEEEEEC--CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC----cHHHHHhh-C
Confidence 35678999999 456777888887764 599999999988888874331 1 1 22222 33333332 3
Q ss_pred CCCccEEE-eCCC----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYF-DNVG----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vi-d~~g----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+|| |... .+.++.+.+.|+++|.++.-.
T Consensus 166 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 166 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 34799998 4332 135788899999999998754
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.031 Score=49.44 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.+.+|.|+|. |.+|...++.++..|.+|++.+++.++ +.+. ++|+.. . ++.+.+++ .|+|+.++
T Consensus 148 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~~~l~~-----aDvVil~v 212 (334)
T 2dbq_A 148 VYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAEF----K---PLEDLLRE-----SDFVVLAV 212 (334)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCEE----C---CHHHHHHH-----CSEEEECC
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCccc----C---CHHHHHhh-----CCEEEECC
Confidence 35789999995 999999999999999999999988776 5555 667531 1 22333433 78888887
Q ss_pred Chh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 236 GGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
... .+ ...+..|+++..++.++.
T Consensus 213 p~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 213 PLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred CCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 642 22 456677888887777663
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.012 Score=49.80 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=67.9
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~ 224 (347)
....+.++.+||-.|+ | .|..+..+++..|++|++++.++...+.+++. .|.. .++..+-. ++ ..
T Consensus 30 ~~~~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~------~~ 100 (256)
T 1nkv_A 30 RVLRMKPGTRILDLGS-G-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GY------VA 100 (256)
T ss_dssp HHTCCCTTCEEEEETC-T-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TC------CC
T ss_pred HhcCCCCCCEEEEECC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hC------Cc
Confidence 5567889999999994 3 48888899998899999999999877777632 3432 12222111 11 01
Q ss_pred CCCccEEEeCCC-------hhhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVG-------GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|+-... ...++++.+.|+++|+++....
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 247999985322 1257888889999999988653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.027 Score=54.18 Aligned_cols=103 Identities=20% Similarity=0.176 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-H-hHHHHHHHcCCCeeeecCCH----HHHHHHHHHHCCCCccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-Q-KVDLLKNKLGFDEAFNYNDE----TDLVAALKRCFPQGIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~-~~~~~~~~~g~~~vi~~~~~----~~~~~~i~~~~~g~~d~ 230 (347)
.|+++||+||++++|++.++.+...|++|+++++.. + -.+.++ +.|...+....+- +.+.+.+.+.. |.+|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi 398 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI 398 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence 468999999999999999999999999999987432 2 223444 4454322222211 12223333222 46999
Q ss_pred EEeCCChh-----------hH---------------HHHHHhhh--cCCeEEEEccccc
Q 019012 231 YFDNVGGE-----------ML---------------DAALLNMR--DHGRIAVCGMVSL 261 (347)
Q Consensus 231 vid~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~ 261 (347)
++++.|.. .+ +.++..|. .+|++|.++...+
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag 457 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 99998820 11 33455564 3589999886543
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.018 Score=50.27 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcC-------CC--eeeecCCHHHHHHHHHHHC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLG-------FD--EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g-------~~--~vi~~~~~~~~~~~i~~~~ 224 (347)
..++.+||++| ++.|..+..+++..+ .+|++++.+++-.+.+++.+. .. .++.. +..+.+.+..
T Consensus 93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~~~~~~ 166 (304)
T 3bwc_A 93 HPKPERVLIIG--GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG----DGLAFVRQTP 166 (304)
T ss_dssp SSSCCEEEEEE--CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHHHSSC
T ss_pred CCCCCeEEEEc--CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC----cHHHHHHhcc
Confidence 35678999999 455777788887654 499999999988888774331 11 12222 3333333223
Q ss_pred CCCccEEEeCCC-----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFDNVG-----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+|+-... .+.++.+.+.|+++|+++...
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 347999985331 245788899999999998864
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.044 Score=45.24 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=68.0
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCC------CEEEEEECChHhHHHHHHH---cC-----CC--eeeecCCHHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHG------CYVVGSAGSSQKVDLLKNK---LG-----FD--EAFNYNDETDLV 217 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G------~~V~~~~~~~~~~~~~~~~---~g-----~~--~vi~~~~~~~~~ 217 (347)
.++++++||-+|+ |. |..++.+++..+ .+|++++.+++..+.+++. .+ .. .++..+..+.+.
T Consensus 77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence 5788999999995 44 888999999876 5999999999887777632 23 11 222221110010
Q ss_pred HHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 218 AALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
..... .+.||+|+..... ..++.+.+.|+++|+++..-.
T Consensus 155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence 00011 2369999877664 467888999999999987654
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.02 Score=47.48 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=52.5
Q ss_pred CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHH
Q 019012 157 SGEYVFVSAA----------------SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220 (347)
Q Consensus 157 ~~~~vLI~Ga----------------~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i 220 (347)
.|.+|||+|| +|++|.+.++.+...|++|+.++++.. .+. ..|. .+++....+++.+.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~~g~-~~~dv~~~~~~~~~v 81 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---PPFV-KRVDVMTALEMEAAV 81 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---CTTE-EEEECCSHHHHHHHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---CCCC-eEEccCcHHHHHHHH
Confidence 5789999999 589999999999999999999876542 110 1122 355655433444555
Q ss_pred HHHCCCCccEEEeCCCh
Q 019012 221 KRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 221 ~~~~~g~~d~vid~~g~ 237 (347)
.+.. +.+|+++.+.|-
T Consensus 82 ~~~~-~~~Dili~~Aav 97 (226)
T 1u7z_A 82 NASV-QQQNIFIGCAAV 97 (226)
T ss_dssp HHHG-GGCSEEEECCBC
T ss_pred HHhc-CCCCEEEECCcc
Confidence 4433 359999999884
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.039 Score=47.28 Aligned_cols=89 Identities=8% Similarity=0.160 Sum_probs=63.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
.+|||+|| |.+|...+..+...|.+|+++++++.+.+.+. ..++..+ .|..+. . -.++|+||.+.+.
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-------~---~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEP-------S---LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCC-------C---CTTCCEEEECCCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEeccccc-------c---cCCCCEEEECCCc
Confidence 58999998 99999999999888999999999998877776 5565322 233321 1 2369999999973
Q ss_pred -----hhHHHHHHhhhc----CCeEEEEccc
Q 019012 238 -----EMLDAALLNMRD----HGRIAVCGMV 259 (347)
Q Consensus 238 -----~~~~~~~~~l~~----~G~~v~~g~~ 259 (347)
......++.++. -.+++.++..
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 123455555544 2688887754
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.045 Score=50.56 Aligned_cols=93 Identities=14% Similarity=0.128 Sum_probs=60.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe--eeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE--AFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+.+|+|+| +|.+|.++++.+...|++|++++++.++.+.+.+.++... .+|..+.+++.+.+. ++|+|++|+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-----~~DvVIn~a 76 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA-----KHDLVISLI 76 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT-----TSSEEEECC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc-----CCcEEEECC
Confidence 56899998 6999999998888889999999998877665542343211 234443313333332 599999999
Q ss_pred Chh-hHHHHHHhhhcCCeEEEE
Q 019012 236 GGE-MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 236 g~~-~~~~~~~~l~~~G~~v~~ 256 (347)
+.. .......++.++-.+++.
T Consensus 77 ~~~~~~~i~~a~l~~g~~vvd~ 98 (450)
T 1ff9_A 77 PYTFHATVIKSAIRQKKHVVTT 98 (450)
T ss_dssp C--CHHHHHHHHHHHTCEEEES
T ss_pred ccccchHHHHHHHhCCCeEEEe
Confidence 853 333344556666666654
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=95.98 E-value=0.022 Score=48.84 Aligned_cols=101 Identities=9% Similarity=0.068 Sum_probs=68.7
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHc----CCCeeeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKL----GFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++.+ |...+ ..... ++.+ .+.
T Consensus 104 ~~~~~~~~~~VLD~G~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~~~ 176 (275)
T 1yb2_A 104 MRCGLRPGMDILEVGV-G-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---FIS 176 (275)
T ss_dssp --CCCCTTCEEEEECC-T-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---CCC
T ss_pred HHcCCCCcCEEEEecC-C-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---cCc
Confidence 4567889999999994 3 677888888873 579999999999888877332 53322 11111 2111 111
Q ss_pred CCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|+-.... ..++.+.+.|+++|+++....
T Consensus 177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2369999975553 478899999999999988753
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.012 Score=52.02 Aligned_cols=88 Identities=11% Similarity=0.057 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|.|+| .|.+|...++.++..|++|++.+++..+.+.+. ++|+... ++.+.+++ .|+|+-++.
T Consensus 144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~P 209 (330)
T 4e5n_A 144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQV-------ACSELFAS-----SDFILLALP 209 (330)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCceeC-------CHHHHHhh-----CCEEEEcCC
Confidence 578999999 599999999999999999999998874555555 6665211 22223332 667776655
Q ss_pred h--h---h-HHHHHHhhhcCCeEEEEcc
Q 019012 237 G--E---M-LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~--~---~-~~~~~~~l~~~G~~v~~g~ 258 (347)
. + . -...+..|+++..++.++.
T Consensus 210 ~t~~t~~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 210 LNADTLHLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence 2 1 1 2355666666666666653
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=95.98 E-value=0.017 Score=47.68 Aligned_cols=101 Identities=11% Similarity=0.072 Sum_probs=63.2
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCC--
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~-- 225 (347)
....++.+||=+| .+.|..++.+++.. +.+|++++.+++..+.+++ ..|...-+..... +..+.+..+..
T Consensus 54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~~ 130 (221)
T 3u81_A 54 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY 130 (221)
T ss_dssp HHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTTS
T ss_pred HHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHhc
Confidence 3445788999998 45678888888865 6799999999988777763 2454321221111 33333333331
Q ss_pred --CCccEEEeCCChhh-------HHHHHHhhhcCCeEEEEc
Q 019012 226 --QGIDIYFDNVGGEM-------LDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 --g~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g 257 (347)
+.||+||-...... +... +.|+++|.++.-.
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred CCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence 47999975543221 2222 6899999987643
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.053 Score=46.98 Aligned_cols=85 Identities=11% Similarity=0.037 Sum_probs=59.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-h
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-E 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~ 238 (347)
+|.|+|+ |.+|...+..+...|.+|++.++++++.+.+. +.|+.. .. +..+.+. .+|+||.|+.. .
T Consensus 7 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~-----~~D~vi~~v~~~~ 73 (299)
T 1vpd_A 7 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAE-----QCDVIITMLPNSP 73 (299)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHh-----CCCEEEEECCCHH
Confidence 7999995 99999988888888999999999998888887 666531 11 2222333 27899988873 3
Q ss_pred hHHHHH-------HhhhcCCeEEEEc
Q 019012 239 MLDAAL-------LNMRDHGRIAVCG 257 (347)
Q Consensus 239 ~~~~~~-------~~l~~~G~~v~~g 257 (347)
.++..+ ..++++..++.+.
T Consensus 74 ~~~~~~~~~~~l~~~l~~~~~vv~~s 99 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPGTVLIDMS 99 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHHHHhCcchHhhcCCCCCEEEECC
Confidence 444443 4456666666554
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.019 Score=48.87 Aligned_cols=87 Identities=13% Similarity=0.043 Sum_probs=62.1
Q ss_pred hHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 144 ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
-....|.+. + -.|.+++|.|+++.+|..+++++...|++|+++.+... ++.+.+++
T Consensus 138 gv~~lL~~~-~-l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~---------------------~L~~~~~~- 193 (276)
T 3ngx_A 138 AVIDIMDYY-G-YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTK---------------------DIGSMTRS- 193 (276)
T ss_dssp HHHHHHHHH-T-CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHHHH-
T ss_pred HHHHHHHHh-C-cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcc---------------------cHHHhhcc-
Confidence 344444333 3 68999999998667999999999999999988764221 34444554
Q ss_pred CCCCccEEEeCCChhh-HHHHHHhhhcCCeEEEEcccc
Q 019012 224 FPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 224 ~~g~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~ 260 (347)
+|++|.++|... +. -..++++..++.+|...
T Consensus 194 ----ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 194 ----SKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY 225 (276)
T ss_dssp ----SSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred ----CCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence 899999999642 22 24578888888888643
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.064 Score=45.06 Aligned_cols=77 Identities=16% Similarity=0.169 Sum_probs=51.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|.|.|++|.+|...++.+... +.+++++....+..+.+. ..+++-++|.+.++...+.+......+.++|+.++|-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 5899999999999999988766 888887665443344443 3356777877765233333333232367888888773
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.016 Score=51.54 Aligned_cols=90 Identities=20% Similarity=0.183 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+|.|+|. |.+|...++.++..|++|++.+++....+.+. +.|+..+ . ++.+.++ ..|+|+-++
T Consensus 162 l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~~ 228 (351)
T 3jtm_A 162 LEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLP-----KCDVIVINM 228 (351)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGG-----GCSEEEECS
T ss_pred ccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHh-----cCCEEEECC
Confidence 45889999995 99999999999999999999998765556666 6776322 1 2222232 267777766
Q ss_pred Ch--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. + .-...+..|+++..++.++.
T Consensus 229 Plt~~t~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 229 PLTEKTRGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp CCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred CCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence 52 1 12556667777777776653
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.011 Score=49.15 Aligned_cols=101 Identities=13% Similarity=0.156 Sum_probs=66.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC-Ce--eeecCCHHHHHHHHHHHCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF-DE--AFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~-~~--vi~~~~~~~~~~~i~~~~~g 226 (347)
....+.++++||-.|+ |. |..+..+++..| .+|++++.+++..+.+++.... .. .+..+.. +.. ..... .+
T Consensus 68 ~~~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~-~~~-~~~~~-~~ 142 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQ-EYANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGG-GGTTT-SC
T ss_pred cccCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCC-Ccc-ccccc-Cc
Confidence 3356788999999995 54 888899999887 5999999999888777633221 11 1211111 100 00001 14
Q ss_pred CccEEEeCCCh----h-hHHHHHHhhhcCCeEEEE
Q 019012 227 GIDIYFDNVGG----E-MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 227 ~~d~vid~~g~----~-~~~~~~~~l~~~G~~v~~ 256 (347)
.||+|+..... . .+..+.+.|+++|+++..
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 69999865442 2 478888899999999886
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.04 Score=48.93 Aligned_cols=74 Identities=15% Similarity=0.179 Sum_probs=49.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH----hHHHHHHHc------CCC-eeeecCCHHHHHHHHHHHCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ----KVDLLKNKL------GFD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~----~~~~~~~~~------g~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
+.+|||+||+|.+|...++.+...|.+|++++++.. +.+.+.+.+ ++. ...|..+.+.+.+.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 101 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----- 101 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-----
Confidence 568999999999999999999888999999998652 333332122 221 1234444312322222
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
++|+||.+++
T Consensus 102 ~~d~vih~A~ 111 (352)
T 1sb8_A 102 GVDYVLHQAA 111 (352)
T ss_dssp TCSEEEECCS
T ss_pred CCCEEEECCc
Confidence 5999999988
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.018 Score=49.22 Aligned_cols=88 Identities=19% Similarity=0.171 Sum_probs=61.4
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC
Q 019012 145 AYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 145 a~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
+...|.+..---.|.+++|.|.++.+|..+++++...|++|+++.+... ++.+.+++
T Consensus 148 v~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~---------------------~L~~~~~~-- 204 (286)
T 4a5o_A 148 IMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR---------------------DLADHVSR-- 204 (286)
T ss_dssp HHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHHHT--
T ss_pred HHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc---------------------CHHHHhcc--
Confidence 3444433322357999999998677999999999999999988764221 23333443
Q ss_pred CCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 225 PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 225 ~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+|++|.++|...+ ---+.++++..++.+|..
T Consensus 205 ---ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 205 ---ADLVVVAAGKPGL-VKGEWIKEGAIVIDVGIN 235 (286)
T ss_dssp ---CSEEEECCCCTTC-BCGGGSCTTCEEEECCSC
T ss_pred ---CCEEEECCCCCCC-CCHHHcCCCeEEEEeccc
Confidence 8999999996532 122557888888888864
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.096 Score=46.75 Aligned_cols=86 Identities=14% Similarity=0.126 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|.|+| .|.+|...++.++..|.+|++.+++.. .+.+. +.|+.. . ++.+.++ ..|+|+-++.
T Consensus 175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~P 239 (365)
T 4hy3_A 175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLP-RSMLE-ENGVEP----A---SLEDVLT-----KSDFIFVVAA 239 (365)
T ss_dssp SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHH-HTTCEE----C---CHHHHHH-----SCSEEEECSC
T ss_pred CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCC-HHHHh-hcCeee----C---CHHHHHh-----cCCEEEEcCc
Confidence 478999999 599999999999999999999998753 34455 566531 1 2333333 2677776654
Q ss_pred hh------hHHHHHHhhhcCCeEEEEc
Q 019012 237 GE------MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 237 ~~------~~~~~~~~l~~~G~~v~~g 257 (347)
.. .-...+..|++++.++.++
T Consensus 240 lt~~T~~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 240 VTSENKRFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp SSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred CCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence 21 1245667777777777766
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0053 Score=53.72 Aligned_cols=36 Identities=11% Similarity=0.128 Sum_probs=32.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
+.+|||+||+|.+|...++.+...|.+|++++++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 578999999999999999999999999999998765
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.03 Score=48.42 Aligned_cols=98 Identities=9% Similarity=0.038 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCCCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
.+.++.+||-+|+ +.|..+..+++..|++|++++.++...+.+++. .|.. .++..+-. ++ .+..+.
T Consensus 79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~~~~ 150 (297)
T 2o57_A 79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----PCEDNS 150 (297)
T ss_dssp CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----SSCTTC
T ss_pred CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cC-----CCCCCC
Confidence 7789999999994 478888888888799999999999877777632 2331 22222111 10 011237
Q ss_pred ccEEEeCCCh-------hhHHHHHHhhhcCCeEEEEccc
Q 019012 228 IDIYFDNVGG-------EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 228 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
||+|+....- ..+.++.+.|+++|+++.....
T Consensus 151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 9999865431 3578899999999999887643
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.026 Score=48.68 Aligned_cols=90 Identities=16% Similarity=0.136 Sum_probs=61.1
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC
Q 019012 145 AYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 145 a~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
+...|.+..---.|.+++|.|+++.+|..+++++...|++|+++.+....++ +.+.++
T Consensus 152 v~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l~~~~~--- 209 (300)
T 4a26_A 152 VIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------MIDYLR--- 209 (300)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------HHHHHH---
T ss_pred HHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------hhhhhc---
Confidence 4444433333358999999998666999999999999999988875322111 002333
Q ss_pred CCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 225 PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 225 ~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.+|++|.++|...+ ---..++++..++.+|..
T Consensus 210 --~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 210 --TADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT 241 (300)
T ss_dssp --TCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred --cCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence 38999999996522 112457888888888864
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0031 Score=53.95 Aligned_cols=95 Identities=14% Similarity=0.054 Sum_probs=61.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+++|||+||+|++|...++.+...|++|+++++++.+.. ..++. ...|-.+.+++.+.++ ++|++|.+.|
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-----~~D~vi~~Ag 73 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVA-----GCDGIVHLGG 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHT-----TCSEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHc-----CCCEEEECCC
Confidence 468999999999999999988888999999998875422 11111 2245555423322222 5999999987
Q ss_pred h---hhH-----------HHHHHhhhc--CCeEEEEccccc
Q 019012 237 G---EML-----------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 237 ~---~~~-----------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
. +.+ ...++.+.+ .++++.++....
T Consensus 74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~ 114 (267)
T 3rft_A 74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT 114 (267)
T ss_dssp CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence 3 111 123334443 368998876433
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.094 Score=45.10 Aligned_cols=40 Identities=23% Similarity=0.288 Sum_probs=35.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
.+|.|+|+ |.+|...++.+...|.+|++.++++++.+.+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAK 44 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 57999996 99999999999999999999999998877776
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.031 Score=49.41 Aligned_cols=88 Identities=10% Similarity=0.059 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|.|+|. |.+|...++.++..|.+|++.+++.++.+.+. ++|+..+ ++.+.+.+ .|+|+.++.
T Consensus 154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~~-----aDvVi~~vp 219 (330)
T 2gcg_A 154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAAQ-----SDFIVVACS 219 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHhh-----CCEEEEeCC
Confidence 4779999995 99999999999999999999998776556565 6665321 12222332 788888876
Q ss_pred hh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 237 GE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
.. .+ ...+..|+++..++.++.
T Consensus 220 ~~~~t~~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 220 LTPATEGLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 31 22 456677777777776654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.012 Score=53.05 Aligned_cols=74 Identities=14% Similarity=0.159 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.+.+|||+||+|.+|...++.+...|.+|++++++..+..... ..++.. ..|..+.+.+.+.+ .++|+||.+.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~-----~~~d~Vih~A 101 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVT-----EGVDHVFNLA 101 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHh-----CCCCEEEECc
Confidence 3568999999999999999988888999999998765432221 223321 23555432333333 2599999998
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
+
T Consensus 102 ~ 102 (379)
T 2c5a_A 102 A 102 (379)
T ss_dssp C
T ss_pred e
Confidence 7
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.037 Score=45.01 Aligned_cols=96 Identities=18% Similarity=0.093 Sum_probs=62.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC---------------C--eeeecCCHHH
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---------------D--EAFNYNDETD 215 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---------------~--~vi~~~~~~~ 215 (347)
..+.++.+||-.|+ +.|..+..+++. |++|++++.|+.-.+.++++.+. . ..+..+-. +
T Consensus 18 l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~-~ 93 (203)
T 1pjz_A 18 LNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF-A 93 (203)
T ss_dssp HCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS-S
T ss_pred cccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc-c
Confidence 45678899999984 457777888876 89999999999988888744331 1 12211111 1
Q ss_pred HHHHHHHHCCCCccEEEeCCC-----h----hhHHHHHHhhhcCCeEEEE
Q 019012 216 LVAALKRCFPQGIDIYFDNVG-----G----EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 216 ~~~~i~~~~~g~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~ 256 (347)
+... . .+.||+|++... . ..+++..+.|+++|+++.+
T Consensus 94 l~~~--~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 94 LTAR--D--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp STHH--H--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCcc--c--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1100 0 025999997432 1 1467788899999994443
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.038 Score=62.11 Aligned_cols=82 Identities=13% Similarity=0.045 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCch-HHHHHHHHHHHCCCEEEEEECChHh-----HHHHHHHcCC---C---eeeecCCHHHHHHHHHHH
Q 019012 156 KSGEYVFVSAASGA-VGQLVGQLAKLHGCYVVGSAGSSQK-----VDLLKNKLGF---D---EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~-~G~~ai~la~~~G~~V~~~~~~~~~-----~~~~~~~~g~---~---~vi~~~~~~~~~~~i~~~ 223 (347)
-.|+++||+||+++ +|.+.++.+...|++|++++++.++ .+.+.++++. . ...|-.+.++....+.+.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 46899999999999 9999999999999999999987665 3434324432 1 124656553555555554
Q ss_pred CC------CCccEEEeCCCh
Q 019012 224 FP------QGIDIYFDNVGG 237 (347)
Q Consensus 224 ~~------g~~d~vid~~g~ 237 (347)
.. |++|+++++.|.
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCC
T ss_pred HhhhhhhcCCCCEEEECCCc
Confidence 43 478999998874
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.027 Score=48.40 Aligned_cols=82 Identities=6% Similarity=0.046 Sum_probs=54.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|||+||+|.+|...++.+...|.+|+++++.. .|..+.+.+.+.+++. ++|+||.+.+...
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~---~~d~vi~~a~~~~ 68 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEI---RPHIIIHCAAYTK 68 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence 799999999999999999888899999998721 2223322344444432 5899999887311
Q ss_pred ------------------HHHHHHhhhc-CCeEEEEccc
Q 019012 240 ------------------LDAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 240 ------------------~~~~~~~l~~-~G~~v~~g~~ 259 (347)
....++.+++ +.+++.++..
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 69 VDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchh
Confidence 1234444443 5688887754
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.014 Score=52.34 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.|.+|.|+|. |.+|...++.++..|++ |++.+++..+.+.+. ++|+..+ . ++.+.++ ..|+|+.+
T Consensus 162 l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~---~---~l~ell~-----~aDvV~l~ 228 (364)
T 2j6i_A 162 IEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV---E---NIEELVA-----QADIVTVN 228 (364)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC---S---SHHHHHH-----TCSEEEEC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec---C---CHHHHHh-----cCCEEEEC
Confidence 46889999995 99999999999999996 999998775556666 6775321 1 2222333 26777777
Q ss_pred CChh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 235 VGGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
+... .+ ...+..|++++.++.++.
T Consensus 229 ~P~t~~t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 229 APLHAGTKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp CCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 6531 22 345566777776666654
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=95.82 E-value=0.016 Score=49.88 Aligned_cols=94 Identities=10% Similarity=0.096 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc-----CC--C--eeeecCCHHHHHHHHHHHCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL-----GF--D--EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~-----g~--~--~vi~~~~~~~~~~~i~~~~~g 226 (347)
++.+||++|+ +.|..+..+++..+. +|++++.+++-.+.+++.+ +. . .++..+. .+.+.+ ..+
T Consensus 75 ~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~----~~~l~~-~~~ 147 (275)
T 1iy9_A 75 NPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG----FMHIAK-SEN 147 (275)
T ss_dssp SCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS----HHHHHT-CCS
T ss_pred CCCEEEEECC--chHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH----HHHHhh-CCC
Confidence 5689999994 457777788877664 9999999998888887434 22 1 2333322 223332 234
Q ss_pred CccEEEeCCC-----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 227 GIDIYFDNVG-----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 227 ~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
.||+|+-... .+.++.+.+.|+++|.++...
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 7999985332 246889999999999998763
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.013 Score=51.54 Aligned_cols=102 Identities=20% Similarity=0.238 Sum_probs=68.0
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
....++++++||-+|+ |. |..++.+++..+ .+|++++.+++..+.+++. .|...+ ..... ++.+... ..
T Consensus 69 ~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~-d~~~~~~--~~ 142 (317)
T 1dl5_A 69 EWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCG-DGYYGVP--EF 142 (317)
T ss_dssp HHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGGGCCG--GG
T ss_pred HhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEEC-Chhhccc--cC
Confidence 5567889999999995 54 888888887753 4799999999988877733 254321 11111 1111011 12
Q ss_pred CCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcc
Q 019012 226 QGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+....-. ..+.+.+.|+++|+++..-.
T Consensus 143 ~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBC
T ss_pred CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEEC
Confidence 4699999876643 34677889999999987643
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.03 Score=50.09 Aligned_cols=74 Identities=14% Similarity=0.248 Sum_probs=45.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH--HHHHHHc---------CCC-eeeecCCHHHHHHHHHHHCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV--DLLKNKL---------GFD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~--~~~~~~~---------g~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
.+|||+||+|.+|...++.+...|.+|++++++..+. +.+. .+ ++. ...|..+.+++.+.+...
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 5799999999999999998888899999999876531 2222 21 111 113444442343444332
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+||.+.+
T Consensus 78 ~~d~vih~A~ 87 (372)
T 1db3_A 78 QPDEVYNLGA 87 (372)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 5899999887
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.017 Score=49.84 Aligned_cols=95 Identities=14% Similarity=0.143 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC-------C--eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF-------D--EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~-------~--~vi~~~~~~~~~~~i~~~~~ 225 (347)
.++.+||++| ++.|..+..+++..+ .+|++++.+++-.+.+++.+.. . .++.. +..+.+... .
T Consensus 77 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~l~~~-~ 149 (283)
T 2i7c_A 77 KEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE----DASKFLENV-T 149 (283)
T ss_dssp SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES----CHHHHHHHC-C
T ss_pred CCCCeEEEEe--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC----ChHHHHHhC-C
Confidence 4668999999 456777777777664 5999999999988888844431 1 12222 333334332 4
Q ss_pred CCccEEEe-CCC----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFD-NVG----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
+.||+|+- ... .+.++.+.+.|+++|.++...
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 150 NTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp SCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 47999984 321 135678889999999998764
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0096 Score=53.12 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=58.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHc-CCCeeeecCCHHHHHHHHHHH-CCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKL-GFDEAFNYNDETDLVAALKRC-FPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~i~~~-~~g~~d~vid~ 234 (347)
+.+|||+||+|.+|...++.+...| .+|++++++..... .. .+ +.....|..+. +....+.+. ..+++|+||.+
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE-DFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH-HHHHHHHTTCCCSSCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH-HHHHHHHhhcccCCCCEEEEC
Confidence 4679999999999999999988889 79999998765321 11 22 12112333332 222222211 11269999999
Q ss_pred CChh-----h-----------HHHHHHhhhc-CCeEEEEccc
Q 019012 235 VGGE-----M-----------LDAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 235 ~g~~-----~-----------~~~~~~~l~~-~G~~v~~g~~ 259 (347)
++.. . ....++++.+ +.++|.++..
T Consensus 123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~ 164 (357)
T 2x6t_A 123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSA 164 (357)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcch
Confidence 8731 0 1234444443 3388887754
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.02 Score=48.49 Aligned_cols=95 Identities=20% Similarity=0.115 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--------------------C--eeeecCC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--------------------D--EAFNYND 212 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--------------------~--~vi~~~~ 212 (347)
..++.+||..|+ |.|..+..+++. |++|++++.|+.-.+.++++.+. . .++..+-
T Consensus 66 ~~~~~~vLD~GC--G~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 66 GQSGLRVFFPLC--GKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TCCSCEEEETTC--TTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCCeEEEeCC--CCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 467889999994 457777778775 99999999999988888744432 1 1111111
Q ss_pred HHHHHHHHHHHCCCCccEEEeCCC-----h----hhHHHHHHhhhcCCeEEEEc
Q 019012 213 ETDLVAALKRCFPQGIDIYFDNVG-----G----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 213 ~~~~~~~i~~~~~g~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g 257 (347)
. + +.....+.||+|++... . ..++.+.+.|+++|+++.+.
T Consensus 143 ~-~----l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 143 F-D----LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp T-T----GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred c-c----CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 1 1 11111147999997532 1 14677888999999986544
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.079 Score=45.65 Aligned_cols=86 Identities=14% Similarity=0.139 Sum_probs=57.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG- 237 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~- 237 (347)
.+|.|+|. |.+|...++.+...|.+|++.++++++.+.+. +.|+... . +..+.+.+ .|+||-|+..
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~---~~~~~~~~-----aDvvi~~vp~~ 68 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAERA---A---TPCEVVES-----CPVTFAMLADP 68 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEEC---S---SHHHHHHH-----CSEEEECCSSH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCeec---C---CHHHHHhc-----CCEEEEEcCCH
Confidence 47889995 99999999999889999999999999888888 6665311 1 22223332 6777777763
Q ss_pred hhHHHHH-------HhhhcCCeEEEEc
Q 019012 238 EMLDAAL-------LNMRDHGRIAVCG 257 (347)
Q Consensus 238 ~~~~~~~-------~~l~~~G~~v~~g 257 (347)
..+...+ ..++++..++..+
T Consensus 69 ~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 69 AAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 3333333 3445555555443
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=95.75 E-value=0.035 Score=49.39 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAK-LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~-~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.|.+|.|+|. |.+|...++.++ ..|.+|++.+++.++.+.+. ++|+..+ . ++.+.+++ .|+|+.+
T Consensus 161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-~~g~~~~---~---~l~ell~~-----aDvVil~ 227 (348)
T 2w2k_A 161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-ALGAERV---D---SLEELARR-----SDCVSVS 227 (348)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHTCEEC---S---SHHHHHHH-----CSEEEEC
T ss_pred CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-hcCcEEe---C---CHHHHhcc-----CCEEEEe
Confidence 46789999995 999999999999 99999999998876656565 6665321 1 22223332 6777777
Q ss_pred CChh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 235 VGGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
+... .+ ...+..|+++..++.++.
T Consensus 228 vp~~~~t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 228 VPYMKLTHHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp CCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred CCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 6531 12 345566666666665543
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.016 Score=50.43 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=50.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.+|||+||+|.+|...++.+... |.+|++++++..+.+... ++. ...|..+.+.+.+.+++. ++|+||.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~---~~d~vih~ 75 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN---SGPFEVVNALDFNQIEHLVEVH---KITDIYLM 75 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH---SSCEEECCTTCHHHHHHHHHHT---TCCEEEEC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC---CCceEEecCCCHHHHHHHHhhc---CCCEEEEC
Confidence 357999999999999988888777 789999998766533222 332 224555542344444321 59999999
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
.+.
T Consensus 76 a~~ 78 (312)
T 2yy7_A 76 AAL 78 (312)
T ss_dssp CCC
T ss_pred Ccc
Confidence 873
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0043 Score=52.32 Aligned_cols=103 Identities=12% Similarity=-0.013 Sum_probs=64.1
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHH-
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRC- 223 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~- 223 (347)
....++.+||=+| .+.|..++.+|+.. +.+|++++.+++..+.+++ ..|.. .++..+.. ++...+...
T Consensus 56 ~~~~~~~~VLDiG--~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~-~~l~~~~~~~ 132 (242)
T 3r3h_A 56 IRLTRAKKVLELG--TFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPAL-DTLHSLLNEG 132 (242)
T ss_dssp HHHHTCSEEEEEE--SCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHH-HHHHHHHHHH
T ss_pred HhhcCcCEEEEee--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH-HHHHHHhhcc
Confidence 3445678999998 45677888888876 5699999998864433331 45653 22322221 222222111
Q ss_pred CCCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 224 FPQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 224 ~~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
..+.||+||-.... ..++.+.+.|++||.++.-..
T Consensus 133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 133 GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 12479988743332 257888999999999987543
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.018 Score=50.63 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC------CeeeecCCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF------DEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.++.+||.+| ++.|..+..+++..+ .+|++++.+++-.+.+++.+.. +.-+..... +..+.+.. ..+.|
T Consensus 115 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~-~~~~f 190 (321)
T 2pt6_A 115 KEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE-DASKFLEN-VTNTY 190 (321)
T ss_dssp SSCCEEEEEE--CTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH-CCSCE
T ss_pred CCCCEEEEEc--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEc-cHHHHHhh-cCCCc
Confidence 3568999999 455777788887754 5999999999988888844432 100111111 33333332 23479
Q ss_pred cEEE-eCC---C-------hhhHHHHHHhhhcCCeEEEEc
Q 019012 229 DIYF-DNV---G-------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 229 d~vi-d~~---g-------~~~~~~~~~~l~~~G~~v~~g 257 (347)
|+|+ |.. + .+.++.+.+.|+++|.++...
T Consensus 191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998 332 1 235788889999999998753
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.062 Score=44.59 Aligned_cols=77 Identities=10% Similarity=0.162 Sum_probs=53.2
Q ss_pred CCCEEEEEcC----------------CchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHH
Q 019012 157 SGEYVFVSAA----------------SGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAAL 220 (347)
Q Consensus 157 ~~~~vLI~Ga----------------~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i 220 (347)
.|.+|||+|| +|.+|.+.++.+...|++|+.+.++... .... ..++ .+++.....+..+.+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~~-~~~~-~~~~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KPEP-HPNL-SIREITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CCCC-CTTE-EEEECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cccC-CCCe-EEEEHhHHHHHHHHH
Confidence 5789999999 7889999999999999999999986431 1000 0122 355555433555555
Q ss_pred HHHCCCCccEEEeCCCh
Q 019012 221 KRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 221 ~~~~~g~~d~vid~~g~ 237 (347)
.+.. +++|+++.+.+-
T Consensus 79 ~~~~-~~~Dili~aAAv 94 (232)
T 2gk4_A 79 QERV-QDYQVLIHSMAV 94 (232)
T ss_dssp HHHG-GGCSEEEECSBC
T ss_pred HHhc-CCCCEEEEcCcc
Confidence 5544 369999999883
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.035 Score=49.13 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=56.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+|.|+|. |.+|...++.++..|.+|++.+++.++ +.+. ++|+.. . ++.+.+++ .|+|+.++
T Consensus 144 l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~e~l~~-----aDiVil~v 208 (333)
T 2d0i_A 144 LYGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKARY----M---DIDELLEK-----SDIVILAL 208 (333)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTEEE----C---CHHHHHHH-----CSEEEECC
T ss_pred CCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----c---CHHHHHhh-----CCEEEEcC
Confidence 45789999995 999999999999999999999988775 5555 556421 1 12222332 67777666
Q ss_pred Chh-----hH-HHHHHhhhcCCeEEEEc
Q 019012 236 GGE-----ML-DAALLNMRDHGRIAVCG 257 (347)
Q Consensus 236 g~~-----~~-~~~~~~l~~~G~~v~~g 257 (347)
... .+ ...+..|+++ .++.++
T Consensus 209 p~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 209 PLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp CCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred CCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 532 22 2345566666 555554
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.032 Score=48.09 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=57.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+++|.|++..+|.-+++++...|++|+++.+... ++.+.++ .+|+||.++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~~~~~-----~ADIVI~Av 216 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------HLDEEVN-----KGDILVVAT 216 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------SHHHHHT-----TCSEEEECC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc---------------------cHHHHhc-----cCCEEEECC
Confidence 57899999998557899999999999999988753321 3333343 389999999
Q ss_pred ChhhHHHHHHhhhcCCeEEEEccc
Q 019012 236 GGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 236 g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
|...+ -.-++++++..++.+|..
T Consensus 217 g~p~~-I~~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 217 GQPEM-VKGEWIKPGAIVIDCGIN 239 (301)
T ss_dssp CCTTC-BCGGGSCTTCEEEECCCB
T ss_pred CCccc-CCHHHcCCCcEEEEccCC
Confidence 97532 222347888899999874
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.0086 Score=52.90 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH-HHHHHHc-CCC-eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKL-GFD-EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~~~-g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
.+.+|||+||+|.+|...++.+...|.+|++++++.... +.+. .+ ++. ...|..+.+.+.+.++. +.+|+||.
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih 95 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADHALVNQLIGD---LQPDAVVH 95 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEE
Confidence 457899999999999999998888999999999875421 1111 11 221 12355554233333332 25999999
Q ss_pred CCChhh---------------HHHHHHhhhcC--CeEEEEcccc
Q 019012 234 NVGGEM---------------LDAALLNMRDH--GRIAVCGMVS 260 (347)
Q Consensus 234 ~~g~~~---------------~~~~~~~l~~~--G~~v~~g~~~ 260 (347)
+.+... ....++.+.+. +++|.++...
T Consensus 96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~ 139 (333)
T 2q1w_A 96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL 139 (333)
T ss_dssp CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence 987311 12344444432 5898887643
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.016 Score=49.48 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=68.8
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHH
Q 019012 150 HEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 150 ~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~ 223 (347)
.....+.++.+||-+|+ +.|..+..+++..|.+|++++.++...+.+++. .|.. .++..+-. ++ ..
T Consensus 54 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~ 125 (273)
T 3bus_A 54 IALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-----PF 125 (273)
T ss_dssp HHHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CS
T ss_pred HHhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-----CC
Confidence 35567789999999994 458888889988899999999999887777632 2332 22222111 10 01
Q ss_pred CCCCccEEEeCCC-----h--hhHHHHHHhhhcCCeEEEEccc
Q 019012 224 FPQGIDIYFDNVG-----G--EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 224 ~~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
..+.||+|+.... . ..++.+.+.|+++|+++.....
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 1237999985322 1 3578888899999999877643
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0053 Score=53.67 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH-HHHHHHcCCC-eee---e-cCCHHHHHHHHHHHCCCCcc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKLGFD-EAF---N-YNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~~~g~~-~vi---~-~~~~~~~~~~i~~~~~g~~d 229 (347)
-.|.+++|.|++..+|..+++++...|++|+++.++..+. ++.. .++.. +.. . .+.. ++.+.+++ +|
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~~~~~t~~~~t~~~-~L~e~l~~-----AD 247 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLNKHHVEDLGEYSED-LLKKCSLD-----SD 247 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCCCCEEEEEEECCHH-HHHHHHHH-----CS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhhcccccccccccHh-HHHHHhcc-----CC
Confidence 4789999999744679999999999999999887763321 1111 33321 111 0 1112 67777775 99
Q ss_pred EEEeCCChhh--HHHHHHhhhcCCeEEEEccc
Q 019012 230 IYFDNVGGEM--LDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 230 ~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~ 259 (347)
+||.++|... +.. +.++++-.++.+|..
T Consensus 248 IVIsAtg~p~~vI~~--e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 248 VVITGVPSENYKFPT--EYIKEGAVCINFACT 277 (320)
T ss_dssp EEEECCCCTTCCBCT--TTSCTTEEEEECSSS
T ss_pred EEEECCCCCcceeCH--HHcCCCeEEEEcCCC
Confidence 9999999753 322 336777777778764
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.031 Score=47.50 Aligned_cols=100 Identities=15% Similarity=0.051 Sum_probs=65.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCcc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
....+.++.+||=+|+ +.|..++.+++. |++|++++.+++-.+.+++..... ...+..+. +. .......+.||
T Consensus 39 ~~l~l~~g~~VLDlGc--GtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD 112 (261)
T 3iv6_A 39 FLENIVPGSTVAVIGA--STRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD 112 (261)
T ss_dssp HTTTCCTTCEEEEECT--TCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred HhcCCCCcCEEEEEeC--cchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence 4567889999999994 568888888875 889999999999999888444322 11222111 10 00001124799
Q ss_pred EEEeCCC-----h----hhHHHHHHhhhcCCeEEEEc
Q 019012 230 IYFDNVG-----G----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 230 ~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g 257 (347)
+|+-+.. . ..+....+.+ |+|+++..-
T Consensus 113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 9986432 1 1566777788 999988653
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.026 Score=48.30 Aligned_cols=78 Identities=18% Similarity=0.178 Sum_probs=58.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
--.|.+++|.|++..+|.-+++++...|++|+++.+... ++.+.+++ +|++|.+
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~~~~~~-----ADIVI~A 209 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVEN-----ADLLIVA 209 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHH-----CSEEEEC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHhcc-----CCEEEEC
Confidence 357899999998557899999999999999999864332 34444554 8999999
Q ss_pred CChhhHHHHHHhhhcCCeEEEEccc
Q 019012 235 VGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+|...+ -.-++++++..++.+|..
T Consensus 210 vg~p~l-I~~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 210 VGKPGF-IPGDWIKEGAIVIDVGIN 233 (288)
T ss_dssp SCCTTC-BCTTTSCTTCEEEECCCE
T ss_pred CCCcCc-CCHHHcCCCcEEEEccCC
Confidence 997532 112346888888888865
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.071 Score=45.96 Aligned_cols=85 Identities=7% Similarity=0.096 Sum_probs=55.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|||+||+|.+|...++.+. .|.+|++++++.. . ...|..+.+.+.+.++.. ++|+||.+.+...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~----~~~D~~d~~~~~~~~~~~---~~d~vih~a~~~~ 66 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAAHTA 66 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------c----ccccCCCHHHHHHHHHhc---CCCEEEECcccCC
Confidence 69999999999999988888 7999999987641 1 123444432333344321 5899999887311
Q ss_pred ------------------HHHHHHhhhc-CCeEEEEccc
Q 019012 240 ------------------LDAALLNMRD-HGRIAVCGMV 259 (347)
Q Consensus 240 ------------------~~~~~~~l~~-~G~~v~~g~~ 259 (347)
....++.+++ +.+++.++..
T Consensus 67 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 105 (299)
T 1n2s_A 67 VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD 105 (299)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 2344555554 4488877754
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.058 Score=47.15 Aligned_cols=90 Identities=13% Similarity=0.056 Sum_probs=59.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHH--CCCEEEEEE-CChHh--HHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKL--HGCYVVGSA-GSSQK--VDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYF 232 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~--~G~~V~~~~-~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vi 232 (347)
-+|.|+| +|.+|...+..+.. .++++++++ +++++ .+.++ ++|.... .. ++.+ +.+.+.+ ++|+||
T Consensus 5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~-~~g~~~~---~~--~~e~-ll~~~~~~~iDvV~ 76 (312)
T 1nvm_B 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT---YA--GVEG-LIKLPEFADIDFVF 76 (312)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE---SS--HHHH-HHHSGGGGGEEEEE
T ss_pred CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH-HcCCCcc---cC--CHHH-HHhccCCCCCcEEE
Confidence 4789999 59999988888743 467766554 44444 45555 7886421 11 3333 3232223 699999
Q ss_pred eCCChh-hHHHHHHhhhc--CCeEEEE
Q 019012 233 DNVGGE-MLDAALLNMRD--HGRIAVC 256 (347)
Q Consensus 233 d~~g~~-~~~~~~~~l~~--~G~~v~~ 256 (347)
+|++.. +.+.+..+++. |.++++.
T Consensus 77 ~atp~~~h~~~a~~al~a~~Gk~Vi~e 103 (312)
T 1nvm_B 77 DATSASAHVQNEALLRQAKPGIRLIDL 103 (312)
T ss_dssp ECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence 999964 67888888888 7777763
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.013 Score=48.01 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
..++.+||-+| .+.|..++.+++.. +.+|++++.+++..+.+++. .+...-+..... +..+.+.. ..+ ||
T Consensus 54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-fD 128 (210)
T 3c3p_A 54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-ID 128 (210)
T ss_dssp HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-EE
T ss_pred hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-CC
Confidence 34678999998 56788888999876 57999999999887777632 343211111111 22222222 234 99
Q ss_pred EEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 230 IYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 230 ~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
+|+-.... ..++.+.+.|+++|.++.-.
T Consensus 129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 129 ILFMDCDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 99743221 36788888999999988743
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.52 Score=41.29 Aligned_cols=89 Identities=13% Similarity=0.158 Sum_probs=55.9
Q ss_pred EEEEEcCCchHHHHH-HHHHHHCCCEEE-EEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLV-GQLAKLHGCYVV-GSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~a-i~la~~~G~~V~-~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|.|+|+ |.+|... +..+...+++++ +.+++.++.+.+.+++|...+. . ++.+.+. ...+|+|+.|+..
T Consensus 2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~---~~~~~l~---~~~~D~V~i~tp~ 72 (332)
T 2glx_A 2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T---SVEELVG---DPDVDAVYVSTTN 72 (332)
T ss_dssp EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S---CHHHHHT---CTTCCEEEECSCG
T ss_pred eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C---CHHHHhc---CCCCCEEEEeCCh
Confidence 5889996 9999875 544333788876 4566666666555477764222 2 2222222 1269999999986
Q ss_pred h-hHHHHHHhhhcCCeEEEEcc
Q 019012 238 E-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 238 ~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
. +.+.+..++.. |+-|.+..
T Consensus 73 ~~h~~~~~~al~~-Gk~v~~ek 93 (332)
T 2glx_A 73 ELHREQTLAAIRA-GKHVLCEK 93 (332)
T ss_dssp GGHHHHHHHHHHT-TCEEEECS
T ss_pred hHhHHHHHHHHHC-CCeEEEeC
Confidence 4 66777777776 45455543
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.042 Score=48.25 Aligned_cols=89 Identities=10% Similarity=0.027 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-.|.+|.|+|. |.+|...++.++..|.+|++.++ +.++ +.+. ++|+.. . . ++.+.+.+ .|+|+-+
T Consensus 144 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~-~---~--~l~ell~~-----aDvVil~ 209 (320)
T 1gdh_A 144 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF-H---D--SLDSLLSV-----SQFFSLN 209 (320)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE-C---S--SHHHHHHH-----CSEEEEC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE-c---C--CHHHHHhh-----CCEEEEe
Confidence 46789999995 99999999999999999999998 7665 4455 677632 1 1 22233332 7888887
Q ss_pred CChh-----hH-HHHHHhhhcCCeEEEEcc
Q 019012 235 VGGE-----ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~~-----~~-~~~~~~l~~~G~~v~~g~ 258 (347)
+... .+ ...+..|+++..++.++.
T Consensus 210 ~p~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 210 APSTPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp CCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred ccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 7631 22 446677788877777764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.027 Score=49.62 Aligned_cols=38 Identities=24% Similarity=0.235 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~ 194 (347)
.+.+|||+||+|.+|...+..+...|.+|++++++.+.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 41 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN 41 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence 46789999999999999999888899999998887653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.053 Score=46.05 Aligned_cols=89 Identities=15% Similarity=0.104 Sum_probs=58.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|||+||+|.+|...+..+. .|.+|+++++++.. + . + ...|..+.+++.+.++.. .+|+||.+.|...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--~---~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--G---G--YKLDLTDFPRLEDFIIKK---RPDVIINAAAMTD 69 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--T---C--EECCTTSHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--C---C--ceeccCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence 58999999999999888877 48999999987642 1 1 2 345555542344444432 5899999987311
Q ss_pred ------------------HHHHHHhhh-cCCeEEEEcccc
Q 019012 240 ------------------LDAALLNMR-DHGRIAVCGMVS 260 (347)
Q Consensus 240 ------------------~~~~~~~l~-~~G~~v~~g~~~ 260 (347)
....++.+. .+++++.++...
T Consensus 70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~ 109 (273)
T 2ggs_A 70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDY 109 (273)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecce
Confidence 123333443 357888887643
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.093 Score=47.37 Aligned_cols=39 Identities=15% Similarity=0.067 Sum_probs=31.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
...+.+|||+||+|-+|...+..+...|.+|+++++...
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~ 46 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR 46 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 467889999999999999999888888999999987643
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.037 Score=45.79 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=65.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEECChHhHHHHHHHc---C-----C--CeeeecCCHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHG-------CYVVGSAGSSQKVDLLKNKL---G-----F--DEAFNYNDETDL 216 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-------~~V~~~~~~~~~~~~~~~~~---g-----~--~~vi~~~~~~~~ 216 (347)
.++++++||-+|+ |. |..+..+++..+ .+|++++.+++..+.+++.+ + . ..++..+.
T Consensus 81 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---- 154 (227)
T 1r18_A 81 HLKPGARILDVGS-GS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG---- 154 (227)
T ss_dssp TCCTTCEEEEESC-TT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG----
T ss_pred hCCCCCEEEEECC-Cc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc----
Confidence 5788999999995 54 888888888776 49999999998777776322 1 1 11222211
Q ss_pred HHHHHHHCC-CCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 217 VAALKRCFP-QGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 217 ~~~i~~~~~-g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+. +.. +.||+|+..... ...+.+.+.|+++|+++..-.
T Consensus 155 ~~~---~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 155 RKG---YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGC---CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred ccC---CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence 110 111 369999877664 456888999999999887543
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.03 Score=47.21 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=67.6
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCC
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~ 225 (347)
...+.++.+||-+|+ +.|..+..+++..+.+|++++.++...+.+++. .|.. .++..+-. ++. ...
T Consensus 41 l~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~-----~~~ 112 (257)
T 3f4k_A 41 INELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD-NLP-----FQN 112 (257)
T ss_dssp SCCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCS-----SCT
T ss_pred HhcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh-hCC-----CCC
Confidence 346788999999994 458889999999888999999999887776632 3432 12222111 110 112
Q ss_pred CCccEEEeCCC------hhhHHHHHHhhhcCCeEEEEcc
Q 019012 226 QGIDIYFDNVG------GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+-... ...++.+.+.|+++|+++....
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 47999975322 1367888889999999988764
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.014 Score=49.38 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.+ +++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++ ..... ++.+.+. .+|+||+|+
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~---~~~~~---~~~~~~~-----~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK---IFSLD---QLDEVVK-----KAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE---EEEGG---GHHHHHH-----TCSEEEECS
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc---cCCHH---HHHhhhc-----CCCEEEECC
Confidence 46 8999996 9999999999999999 99999999887665542332 12222 3333333 489999988
Q ss_pred Chh------hHHHHHHhhhcCCeEEEEc
Q 019012 236 GGE------MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 236 g~~------~~~~~~~~l~~~G~~v~~g 257 (347)
... .+ ....++++..++.+-
T Consensus 175 p~gm~p~~~~i--~~~~l~~~~~V~Div 200 (253)
T 3u62_A 175 SVGMKGEELPV--SDDSLKNLSLVYDVI 200 (253)
T ss_dssp STTTTSCCCSC--CHHHHTTCSEEEECS
T ss_pred CCCCCCCCCCC--CHHHhCcCCEEEEee
Confidence 521 12 134466666666654
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.11 Score=45.42 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=62.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.+|.|+|. |.+|.+.++.++..|. +|++.++++++.+.+. +.|+. ...+... ++ .+ ...|+||-|+
T Consensus 34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~~~~--~~--~~-----~~aDvVilav 102 (314)
T 3ggo_A 34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA--KV--ED-----FSPDFVMLSS 102 (314)
T ss_dssp SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCTT--GG--GG-----GCCSEEEECS
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcCCHH--HH--hh-----ccCCEEEEeC
Confidence 68999995 9999999999999998 9999999999989888 88863 2221111 10 11 2488999988
Q ss_pred Chhh----HHHHHHhhhcCCeEEEEcc
Q 019012 236 GGEM----LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~~----~~~~~~~l~~~G~~v~~g~ 258 (347)
.... +......++++..++.++.
T Consensus 103 p~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 103 PVRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp CGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred CHHHHHHHHHHHhhccCCCcEEEECCC
Confidence 7543 3444445666666666554
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.53 E-value=0.055 Score=46.43 Aligned_cols=87 Identities=10% Similarity=0.132 Sum_probs=60.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCC-CccEEEeCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQ-GIDIYFDNV 235 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g-~~d~vid~~ 235 (347)
+|.|+|+ |.+|.+.++.+...|. +|++.++++++.+.++ +.|... ..+ + ..+.+ . ..|+||.|+
T Consensus 3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~~--~---~~~~~-----~~~aDvVilav 70 (281)
T 2g5c_A 3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT--S---IAKVE-----DFSPDFVMLSS 70 (281)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES--C---GGGGG-----GTCCSEEEECS
T ss_pred EEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCcccccC--C---HHHHh-----cCCCCEEEEcC
Confidence 6899995 9999999999988898 9999999999888888 788631 221 1 11111 2 489999999
Q ss_pred ChhhH----HHHHHhhhcCCeEEEEcc
Q 019012 236 GGEML----DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~~~~----~~~~~~l~~~G~~v~~g~ 258 (347)
..... ......++++..++.++.
T Consensus 71 p~~~~~~v~~~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 71 PVRTFREIAKKLSYILSEDATVTDQGS 97 (281)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred CHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 86433 333345566666665543
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.025 Score=51.05 Aligned_cols=90 Identities=17% Similarity=0.012 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.++.|+|. |.+|...++.++..|.+|++.+++..+.+.+. ++|+..+ . ++.+.++ ..|+|+.++
T Consensus 189 l~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~---~---~l~ell~-----~aDvV~l~~ 255 (393)
T 2nac_A 189 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH---A---TREDMYP-----VCDVVTLNC 255 (393)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC---S---SHHHHGG-----GCSEEEECS
T ss_pred CCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec---C---CHHHHHh-----cCCEEEEec
Confidence 36789999995 99999999999999999999998765555555 6675321 1 1222221 266776665
Q ss_pred Ch--h---hH-HHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E---ML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~---~~-~~~~~~l~~~G~~v~~g~ 258 (347)
.. . .+ ...+..|+++..++.++.
T Consensus 256 Plt~~t~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 256 PLHPETEHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence 52 1 12 345556666666665553
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.068 Score=45.25 Aligned_cols=85 Identities=9% Similarity=0.074 Sum_probs=61.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|.|+|+ |.+|...+..+...|.+|.+.++++++.+.+.+++|+.. .. ++.+.+. .+|+||-|+....
T Consensus 5 ~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~---~~~~~~~-----~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 5 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AM---SHQDLID-----QVDLVILGIKPQL 72 (259)
T ss_dssp EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CS---SHHHHHH-----TCSEEEECSCGGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eC---CHHHHHh-----cCCEEEEEeCcHh
Confidence 6899995 999999888887788899999999888877764567541 11 2222333 3899999998666
Q ss_pred HHHHHHhhhcCCeEEEE
Q 019012 240 LDAALLNMRDHGRIAVC 256 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~ 256 (347)
....+..+.++..++..
T Consensus 73 ~~~v~~~l~~~~~vv~~ 89 (259)
T 2ahr_A 73 FETVLKPLHFKQPIISM 89 (259)
T ss_dssp HHHHHTTSCCCSCEEEC
T ss_pred HHHHHHHhccCCEEEEe
Confidence 66777667655555544
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.031 Score=49.74 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=47.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECCh--HhHHHHHHHc----CCC-eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSS--QKVDLLKNKL----GFD-EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~--~~~~~~~~~~----g~~-~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
+|||+||+|.+|...++.+... |.+|++++++. .+.+.+. ++ ++. ...|..+.+.+.+.+++ +++|+|
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~v 77 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DISESNRYNFEHADICDSAEITRIFEQ---YQPDAV 77 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh-hhhcCCCeEEEECCCCCHHHHHHHHhh---cCCCEE
Confidence 5899999999999988777666 78999998754 1222222 22 111 12355554234344432 269999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
|.+.+.
T Consensus 78 ih~A~~ 83 (361)
T 1kew_A 78 MHLAAE 83 (361)
T ss_dssp EECCSC
T ss_pred EECCCC
Confidence 999873
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.087 Score=47.47 Aligned_cols=76 Identities=16% Similarity=0.059 Sum_probs=49.6
Q ss_pred CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEECChHh---------HHHHH---HHc-------C---CC-eeeecCCHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAK-LHGCYVVGSAGSSQK---------VDLLK---NKL-------G---FD-EAFNYNDET 214 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~-~~G~~V~~~~~~~~~---------~~~~~---~~~-------g---~~-~vi~~~~~~ 214 (347)
.+|||+||+|.+|..+++.+. ..|++|++++++... .+.+. +++ + +. ...|..+.+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 479999999999999988887 899999999876543 23332 022 1 21 123555542
Q ss_pred HHHHHHHHHCCCCccEEEeCCC
Q 019012 215 DLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g 236 (347)
.+.+.+++. +.+|+||.+++
T Consensus 83 ~~~~~~~~~--~~~d~vih~A~ 102 (397)
T 1gy8_A 83 FLNGVFTRH--GPIDAVVHMCA 102 (397)
T ss_dssp HHHHHHHHS--CCCCEEEECCC
T ss_pred HHHHHHHhc--CCCCEEEECCC
Confidence 333333321 24999999987
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0095 Score=49.76 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=65.1
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~ 224 (347)
.....++.+||=+| .+.|..++.+++.. +.+|++++.+++..+.+++. .|.. .++..+. .+.+.+..
T Consensus 66 ~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~----~~~~~~~~ 139 (232)
T 3ntv_A 66 LIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNA----LEQFENVN 139 (232)
T ss_dssp HHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCG----GGCHHHHT
T ss_pred HHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH----HHHHHhhc
Confidence 34456788999998 45677888888855 67999999999887777632 3442 2232222 11222011
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+||-.... ..++.+.+.|+++|.++.-.
T Consensus 140 ~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 140 DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 3579999843332 35678888999999998743
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.48 E-value=0.021 Score=47.36 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=67.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC---CeeeecCCHHHHHHHHHHHCCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
....+.++++||-+|+ | .|..+..+++.. .+|++++.+++..+.+++.+.. ..++..+.. + .+. ..+.
T Consensus 64 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~-~---~~~--~~~~ 134 (231)
T 1vbf_A 64 DELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGT-L---GYE--EEKP 134 (231)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGG-G---CCG--GGCC
T ss_pred HhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcc-c---ccc--cCCC
Confidence 4567789999999995 4 488888888874 8999999999988888744321 122222211 1 010 1237
Q ss_pred ccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFDNVGG-EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 258 (347)
||+|+....- .....+.+.|+++|+++....
T Consensus 135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999876653 345678899999999988754
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.05 Score=46.21 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=66.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHCCC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~~g 226 (347)
..+.++.+||-+|+ +.|..+..+++..+++|++++.++...+.+++. .|.. .++..+-. ++ . ...+
T Consensus 42 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~----~-~~~~ 113 (267)
T 3kkz_A 42 DNLTEKSLIADIGC--GTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD-DL----P-FRNE 113 (267)
T ss_dssp CCCCTTCEEEEETC--TTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC----C-CCTT
T ss_pred ccCCCCCEEEEeCC--CCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh-hC----C-CCCC
Confidence 34788999999994 468888889888556999999999887777632 3432 12221111 10 0 1124
Q ss_pred CccEEEeCCCh------hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVGG------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g~------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.||+|+-...- ..++.+.+.|+++|+++....
T Consensus 114 ~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 114 ELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 79999864431 357788889999999988764
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.47 E-value=0.05 Score=47.99 Aligned_cols=75 Identities=17% Similarity=0.275 Sum_probs=49.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--H---hHHHHHHHcC-CC-eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS--Q---KVDLLKNKLG-FD-EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~--~---~~~~~~~~~g-~~-~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
.+|||+||+|.+|...++.+...|.+|++++++. . ..+.+. ..+ +. ...|..+.+.+.+.++. ..+|+|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~v 77 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITK---YMPDSC 77 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhc---cCCCEE
Confidence 3799999999999999998888999999998642 1 122233 223 22 12355554234444443 159999
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
|.+++.
T Consensus 78 ih~A~~ 83 (347)
T 1orr_A 78 FHLAGQ 83 (347)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999873
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=95.46 E-value=0.043 Score=46.38 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC--eeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD--EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~--~vi~~~~~~~~~~~i~~~~~ 225 (347)
......++.+||-+|+ | .|..+..+++.. .+|++++.+++..+.+++. .|.. .++..+-. ++ .+.+
T Consensus 31 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l-----~~~~ 101 (260)
T 1vl5_A 31 QIAALKGNEEVLDVAT-G-GGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PFTD 101 (260)
T ss_dssp HHHTCCSCCEEEEETC-T-TCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CSCT
T ss_pred HHhCCCCCCEEEEEeC-C-CCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hC-----CCCC
Confidence 4456678999999995 3 677777777764 5999999999888777632 2332 12222111 10 0122
Q ss_pred CCccEEEeCCCh-------hhHHHHHHhhhcCCeEEEEcc
Q 019012 226 QGIDIYFDNVGG-------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 226 g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.||+|+....- ..+.++.+.|+++|+++....
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 479999976442 367889999999999988654
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.047 Score=45.18 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=64.1
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCC-CeeeecCCHHHHHHHHHHHCCCCc
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGF-DEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~-~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
..++++++||=.|+ |..|..++.+++..+.+|++++.+++..+.+++. .+. ..++..+.. .+..+..+.|
T Consensus 51 ~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-----~~~~~~~~~f 124 (230)
T 3evz_A 51 TFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-----IIKGVVEGTF 124 (230)
T ss_dssp TTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-----SSTTTCCSCE
T ss_pred hhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-----hhhhcccCce
Confidence 34678999999995 5467777788877688999999999887777632 343 123322210 0111222479
Q ss_pred cEEEeCC----------------------C----hhhHHHHHHhhhcCCeEEEE
Q 019012 229 DIYFDNV----------------------G----GEMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 229 d~vid~~----------------------g----~~~~~~~~~~l~~~G~~v~~ 256 (347)
|+|+-.. + ...++.+.+.|+++|+++.+
T Consensus 125 D~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 125 DVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp EEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred eEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 9998531 1 22567777789999998875
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.028 Score=46.87 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=66.2
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHC
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~ 224 (347)
.+.......++.+||-+|+ +.|..+..+++. |. +|++++.++...+.+++..... .++..+-. ++ ...
T Consensus 34 ~l~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~-----~~~ 104 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGC--GFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLD-KL-----HLP 104 (243)
T ss_dssp HHHHHSCCCTTCEEEEETC--TTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGG-GC-----CCC
T ss_pred HHHHhccccCCCEEEEEcC--cCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChh-hc-----cCC
Confidence 3445556678899999984 347777777766 77 9999999999888888333221 12221111 10 011
Q ss_pred CCCccEEEeCCCh-------hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFDNVGG-------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.||+|+....- ..++.+.+.|+++|+++...
T Consensus 105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 2379999865431 25788889999999998754
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=0.024 Score=47.26 Aligned_cols=100 Identities=7% Similarity=-0.049 Sum_probs=63.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--CeeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--DEAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
..++.+||=+|+ +.|..+..+++....+|++++.++...+.+++.... ..+--... ++.+.+..+..+.||+|+
T Consensus 58 ~~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~--d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG--LWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES--CHHHHGGGSCTTCEEEEE
T ss_pred CCCCCeEEEEec--cCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEec--CHHHhhcccCCCceEEEE
Confidence 467889999994 356777777554344999999999988888733311 12211111 332222223334799998
Q ss_pred e-CCC----hh-------hHHHHHHhhhcCCeEEEEcc
Q 019012 233 D-NVG----GE-------MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 233 d-~~g----~~-------~~~~~~~~l~~~G~~v~~g~ 258 (347)
- +.. .. .+.++.+.|+++|+++.+..
T Consensus 134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 7 322 11 26788899999999987654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 347 | ||||
| d1vj1a2 | 187 | c.2.1.1 (A:125-311) Putative zinc-binding alcohol | 1e-29 | |
| d1v3va2 | 182 | c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd | 2e-29 | |
| d1vj1a1 | 166 | b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin | 3e-29 | |
| d1v3va1 | 147 | b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd | 2e-27 | |
| d1gu7a2 | 189 | c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea | 4e-22 | |
| d1tt7a2 | 167 | c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac | 5e-19 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 9e-19 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 6e-18 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 2e-17 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 9e-17 | |
| d1o89a2 | 177 | c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc | 5e-16 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 1e-15 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 1e-15 | |
| d1xa0a2 | 176 | c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba | 3e-15 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 6e-15 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 5e-13 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 2e-12 | |
| d1yb5a2 | 174 | c.2.1.1 (A:121-294) Quinone oxidoreductase {Human | 5e-11 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 1e-10 | |
| d1o8ca2 | 77 | c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc | 6e-10 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 1e-08 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 2e-08 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 9e-07 | |
| d1iz0a2 | 171 | c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus | 1e-06 | |
| d1llua2 | 166 | c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom | 2e-06 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 2e-04 |
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 110 bits (274), Expect = 1e-29
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSG--EYVFVSAASGAVGQLVGQLAKLHGCYVVGS 188
LSY +G +GMPG T+ G E +G + + VS A+GA G L GQ+ L GC V
Sbjct: 2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61
Query: 189 AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMR 248
+Q+ L +A ++ L+ P G+D+YFDNVGG++ + + M
Sbjct: 62 ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121
Query: 249 DHGRIAVCGMVSLHS----YHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVIS 304
++ I +CG +S ++ Y P + IT + F +Y + + +
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181
Query: 305 NYKQGK 310
+K+GK
Sbjct: 182 WFKEGK 187
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 109 bits (273), Expect = 2e-29
Identities = 81/183 (44%), Positives = 114/183 (62%), Gaps = 3/183 (1%)
Query: 129 IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS 188
+PLS +G +GMPG TAY G EVC K GE V VSAA+GAVG +VGQ+AKL GC VVG+
Sbjct: 1 LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60
Query: 189 AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMR 248
AGS +K+ LK GFD AFNY L ALK+ P G D YFDNVGGE L+ L M+
Sbjct: 61 AGSDEKIAYLKQI-GFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119
Query: 249 DHGRIAVCGMVSLHSY-HDPQGIHNLFTLVTKRITMKGFLQSDYL-HLYPRFLDYVISNY 306
D G+IA+CG +S+++ + +++ K++ ++GF+ + + + L ++
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179
Query: 307 KQG 309
+G
Sbjct: 180 LEG 182
|
| >d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 108 bits (271), Expect = 3e-29
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 7/164 (4%)
Query: 7 NKQVIF--RGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
++V+ R G P + ++ + + G V+ LYLS DPYMR +M
Sbjct: 5 IQRVVLNSRPGKNGNPVAENFRVE----EFSLLDALNEGQVQVRTLYLSVDPYMRCKMNE 60
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQ 124
+ Y+ P+ Q +G G+ V +S + GD V + I L K+
Sbjct: 61 DTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVD 120
Query: 125 PDHH-IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAAS 167
P G+ + V +S S
Sbjct: 121 PQLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 103 bits (257), Expect = 2e-27
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 18/162 (11%)
Query: 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRS 64
V+ K + + +G P ++D E+K +L K +G L++ L+LS DPYMR
Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKTV--ELPPLK---NGEVLLEALFLSVDPYMRIAS-- 54
Query: 65 SFTSSYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR-KI 123
G + G V++VV+S N F G +V +GW + + +
Sbjct: 55 -------KRLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLT 107
Query: 124 QPDHHIPLSYHIGLLGMPGFT-AYAGFHEVCSPKSGEYVFVS 164
+ + G A+ G+ V +
Sbjct: 108 EWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVTA 147
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 90.1 bits (222), Expect = 4e-22
Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 18/186 (9%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFV-SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
+ + TAY G+ F+ + + AVG+ Q+ KL + +D
Sbjct: 9 ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68
Query: 197 LL---KNKLGFDEAFNYNDET-----DLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMR 248
+ +LG + + + + + + VGG+ +
Sbjct: 69 EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128
Query: 249 DHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYP----RFLDYVIS 304
++G + G +S P + K T GF ++ L L+ +I+
Sbjct: 129 NNGLMLTYGGMSFQPVTIPT-----SLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183
Query: 305 NYKQGK 310
Y++GK
Sbjct: 184 WYEEGK 189
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 80.8 bits (198), Expect = 5e-19
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 11/151 (7%)
Query: 139 GMPGFTAYAGFH---EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV 195
G GFTA H + V V+ A+G VG + + G VV S G+ +
Sbjct: 2 GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61
Query: 196 DLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAV 255
D L +LG E + D D K Q D VGG+ L + L ++ G +AV
Sbjct: 62 DYL-KQLGASEVISREDVYDGTL--KALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118
Query: 256 CGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286
G+ + ++ + + +++ G
Sbjct: 119 SGLTG-----GGEVPATVYPFILRGVSLLGI 144
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 80.4 bits (197), Expect = 9e-19
Identities = 33/177 (18%), Positives = 52/177 (29%), Gaps = 11/177 (6%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
LLG T Y + G V G ++ ++G + K
Sbjct: 8 LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67
Query: 197 LLKNKLGFDEAFNYNDETDLVA-ALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAV 255
K + G E N D + + L G+D F+ +G + A L G
Sbjct: 68 RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126
Query: 256 CGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL--YPRFLDYVISNYKQGK 310
V + + F LV T KG + + P+ + Y K
Sbjct: 127 V--VVGVAASGEEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSE----YMSKK 176
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 78.0 bits (191), Expect = 6e-18
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 10/183 (5%)
Query: 129 IPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGS 188
+P+ +G LG T A GAVG AK+ G ++ +
Sbjct: 1 VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58
Query: 189 AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNM 247
+ L +LG N + D VAA+K G++ ++ G E+L + +
Sbjct: 59 VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117
Query: 248 RDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYK 307
G+IAV G L + ++ L+ T+ G ++ +F+ ++ Y+
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQ 171
Query: 308 QGK 310
QGK
Sbjct: 172 QGK 174
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 77.0 bits (188), Expect = 2e-17
Identities = 28/177 (15%), Positives = 49/177 (27%), Gaps = 11/177 (6%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
L+G T Y +V G V G ++ ++G + K
Sbjct: 8 LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67
Query: 197 LLKNKLGFDEAFNYNDETDLVAAL-KRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAV 255
K +G E N D + + G+D F+ +G L+
Sbjct: 68 KAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS 126
Query: 256 CGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL--QSDYLHLYPRFLDYVISNYKQGK 310
+ D Q + L+ T KG + P+ + + K
Sbjct: 127 VIV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVAD----FMAKK 176
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 75.1 bits (183), Expect = 9e-17
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 6/174 (3%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
+ G T Y + K E AA+G VG + Q AK G ++G+ G++QK
Sbjct: 9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68
Query: 198 LKNKLGFDEAFNYNDETDLVAALKR-CFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVC 256
K G + NY +E DLV LK + + + +D+VG + + +L ++ G +
Sbjct: 69 AL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSF 126
Query: 257 GMVSLHSYHDPQGIHNL-FTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQG 309
G S GI N +L R +++G++ + + + S G
Sbjct: 127 GNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 73.0 bits (178), Expect = 5e-16
Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 15/153 (9%)
Query: 138 LGMPGFTAYAGFHEV----CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193
+G GFTA + P+ GE + V+ ASG VG L G VV +G
Sbjct: 9 IGTAGFTAMLCVMALEDAGVRPQDGE-IVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67
Query: 194 KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRI 253
+ LK LG ++ + K+ + D VG ++L L M G +
Sbjct: 68 THEYLK-SLGASRVLPRDEFAESRPLEKQVW----AGAIDTVGDKVLAKVLAQMNYGGCV 122
Query: 254 AVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286
A CG+ + + + + ++G
Sbjct: 123 AACGL-----AGGFTLPTTVMPFILRNVRLQGV 150
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 72.4 bits (176), Expect = 1e-15
Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 2/174 (1%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
G+ TA+ EV GE V + +A+G VG +AK + + S
Sbjct: 6 FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
+ ++LG + + L+ G+D+ +++ GE + + + GR G
Sbjct: 65 MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124
Query: 258 MVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGKI 311
+++ G+ L + + Y + L +++ + GK+
Sbjct: 125 KKDVYA-DASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 71.9 bits (175), Expect = 1e-15
Identities = 42/175 (24%), Positives = 62/175 (35%), Gaps = 9/175 (5%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
+ G TAY F E +G+ V + A G +G +A+ G V S
Sbjct: 8 MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66
Query: 197 LLKNKLGFDEAFNYND---ETDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGR 252
L ++G D N + E A + +G D + G L +R G
Sbjct: 67 KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126
Query: 253 IAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYK 307
+V G+ DP LV K T KG SD H + + + NY+
Sbjct: 127 YSVAGV---AVPQDPVPFKVYEWLVLKNATFKGIWVSDTSH-FVKTVSITSRNYQ 177
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 70.7 bits (172), Expect = 3e-15
Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 11/151 (7%)
Query: 138 LGMPGFTAYAGFH---EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194
+G GFTA H E V V+ A+G VG L + G V S G + +
Sbjct: 9 IGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE 68
Query: 195 VDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIA 254
D L+ E + ++ Q D VGG L L MR G +A
Sbjct: 69 HDYLRVLGAK---EVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVA 125
Query: 255 VCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285
V G+ + + + +++ G
Sbjct: 126 VSGLTGGAEVP-----TTVHPFILRGVSLLG 151
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 69.7 bits (169), Expect = 6e-15
Identities = 27/177 (15%), Positives = 47/177 (26%), Gaps = 12/177 (6%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
LLG T + + G V V ++ + K +
Sbjct: 8 LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67
Query: 197 LLKNKLGFDEAFNYNDETDL-VAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAV 255
K G + N ND ++ L + G+D + VG + L G
Sbjct: 68 KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126
Query: 256 CGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL--QSDYLHLYPRFLDYVISNYKQGK 310
+ + D + + T KG + P+ + Y K
Sbjct: 127 VLVG----WTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKA----YLDKK 175
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 64.1 bits (155), Expect = 5e-13
Identities = 28/176 (15%), Positives = 50/176 (28%), Gaps = 10/176 (5%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
L+G T Y G V G VG K G + G+ +
Sbjct: 7 LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65
Query: 197 LLKNKLGFDEAFNYNDETDLVAALKRCFPQG--IDIYFDNVGGEMLDAALLNMRDHGRIA 254
+LG E N D + + G E + AL + +
Sbjct: 66 PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125
Query: 255 VCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK 310
V ++ + P L ++KG + + + ++ +Y + K
Sbjct: 126 VVLGLASPNERLPLDPLLLL----TGRSLKGSVFGGF---KGEEVSRLVDDYMKKK 174
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 62.7 bits (151), Expect = 2e-12
Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 14/174 (8%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
L G TAY + G +G + QL K+ V + ++
Sbjct: 12 LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG-GEMLDAALLNMRDHGRIAVC 256
L +LG D + + + ++ +G+++ D VG +D + GR+ +
Sbjct: 72 LAERLGADHVVDARRD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130
Query: 257 GMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK 310
G + + +++ ++ +G L +Y+ L + QGK
Sbjct: 131 G-------YGGELRFPTIRVISSEVSFEGSLVGNYVEL-HELVTL----ALQGK 172
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.9 bits (141), Expect = 5e-11
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 9/173 (5%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
+G+P FTAY K+GE V V ASG VG Q+A+ +G ++G+AG+ +
Sbjct: 9 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK- 67
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
+ + G E FN+ + + K +GIDI + + L L + GR+ V G
Sbjct: 68 IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127
Query: 258 MVSLHSYHDPQGIHNLFTLVTKRITMKGF-LQSDYLHLYPRFLDYVISNYKQG 309
N + K ++ G L S + ++ + + + G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 57.6 bits (138), Expect = 1e-10
Identities = 35/170 (20%), Positives = 54/170 (31%), Gaps = 5/170 (2%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
++ T + G E+ + G V V VG + AKL G + GS
Sbjct: 8 MITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICV 65
Query: 197 LLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM-LDAALLNMRDHGRIAV 255
G + NY + +K +G+D GG L A+ ++ G I+
Sbjct: 66 EAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISN 125
Query: 256 CGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISN 305
S + T+KG L R D V+ N
Sbjct: 126 INYHG--SGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMVVYN 173
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 53.0 bits (127), Expect = 6e-10
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 138 LGMPGFTAYAGFHEV---CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194
+G GFTA + + V+ ASG VG L G VV +G
Sbjct: 9 IGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST 68
Query: 195 VDLLKNKLG 203
+ LK LG
Sbjct: 69 HEYLK-SLG 76
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 51.8 bits (123), Expect = 1e-08
Identities = 33/165 (20%), Positives = 50/165 (30%), Gaps = 21/165 (12%)
Query: 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194
+ L T Y G G V+V+ A G VG A+L G VV +
Sbjct: 4 LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA 61
Query: 195 VDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM--------------- 239
GF+ A D +D D VG E
Sbjct: 62 RLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121
Query: 240 -LDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITM 283
L++ + R G+I + G+ + DP + + + I
Sbjct: 122 VLNSLMQVTRVAGKIGIPGL---YVTEDPGAVDAAAKIGSLSIRF 163
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 51.1 bits (121), Expect = 2e-08
Identities = 28/176 (15%), Positives = 47/176 (26%), Gaps = 11/176 (6%)
Query: 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVD 196
L+G + Y G V G VG K+ G + + + +
Sbjct: 8 LIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 66
Query: 197 LLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNV-GGEMLDAALLNMRDHGRIA 254
LG + N + V + G+D D + L AA+
Sbjct: 67 PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126
Query: 255 VCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK 310
D I + ++ + I F + P + YK K
Sbjct: 127 TVVGA----KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSD----YKNKK 174
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 46.4 bits (109), Expect = 9e-07
Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 7/174 (4%)
Query: 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193
+ L+G T Y + K G V G VG V K G + ++
Sbjct: 6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK 64
Query: 194 KVDLLKNKLGFDEAFNYNDETDLVA-ALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGR 252
+G E + D T ++ L + F+ +G L
Sbjct: 65 DKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNY 124
Query: 253 IAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHL--YPRFLDYVIS 304
+V + + L+ T KG + P+ + ++
Sbjct: 125 G-TSVVVGVPPSAKMLTYDPM--LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLA 175
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 46.2 bits (108), Expect = 1e-06
Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 13/156 (8%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
+ TAY + GE V V AA+GA+G Q+A+ G V+ +A +K+ L
Sbjct: 9 FPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
+ A +R G V G+ ++ +L + GR+ G
Sbjct: 68 PLALGAEEAATYAEVP-------ERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120
Query: 258 MVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLH 293
P L+ + + + GF + L
Sbjct: 121 AAEGEVAPIPP-----LRLMRRNLAVLGFWLTPLLR 151
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.1 bits (105), Expect = 2e-06
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 11/165 (6%)
Query: 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDL 197
+ G T Y G + + + G++V +S G +G + Q A+ G +V K++L
Sbjct: 9 ILCAGVTVYKGLKQ-TNARPGQWVAISGIGG-LGHVAVQYARAMGLHVAAIDIDDAKLEL 66
Query: 198 LKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCG 257
+ G N E + A +R + V A+ R G IA+ G
Sbjct: 67 ARKL-GASLTVNARQEDPVEAI-QRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVG 124
Query: 258 MVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYV 302
+ +F +V K + + G + L LD+
Sbjct: 125 L------PPGDFPTPIFDVVLKGLHIAGSIVGTRADL-QEALDFA 162
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 39.4 bits (90), Expect = 2e-04
Identities = 15/176 (8%), Positives = 40/176 (22%), Gaps = 13/176 (7%)
Query: 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT 67
+ V++ + G PK+ + ++ + +VK L +P +++ +
Sbjct: 5 QAVLYTQH--GEPKDV---LFTQSFEIDDDNLAP-NEVIVKTLGSPVNPSDINQIQGVYP 58
Query: 68 SSYI------PPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLR 121
S + N + + +
Sbjct: 59 SKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGND 118
Query: 122 KIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVS-AASGAVGQLVGQ 176
P A + K ++ A+ G+ +
Sbjct: 119 DDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 347 | |||
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.96 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.96 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.95 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.95 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.95 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.95 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.95 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.94 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.94 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.94 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.94 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.94 | |
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.94 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.93 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.93 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.93 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.93 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.93 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.93 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.93 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.93 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.93 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.93 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.93 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.92 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.92 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.92 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.92 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.92 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.92 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.92 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.92 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.92 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.92 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.92 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.92 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.91 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.9 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.9 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.9 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.9 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.9 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.9 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.9 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.9 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.89 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.89 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.88 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.88 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.86 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.78 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.54 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.36 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.29 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.19 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.14 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.1 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.08 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.06 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.06 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.05 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.04 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.02 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.01 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.99 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.98 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.97 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.93 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.92 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.92 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.9 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.89 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.89 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.89 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.89 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.88 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.88 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.85 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 97.84 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.83 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.82 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.81 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.8 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.78 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 97.78 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.77 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.77 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.75 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 97.75 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 97.72 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.72 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.71 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 97.7 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.65 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.62 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.61 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.58 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.57 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.55 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.53 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.52 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.51 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.51 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.49 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.44 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.43 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.4 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.37 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.37 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.36 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.36 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.32 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.31 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.31 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.28 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.28 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.27 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 97.26 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 97.23 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 97.23 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.21 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.19 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 97.19 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.12 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 97.09 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.08 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.08 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.05 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.01 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.98 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.93 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 96.93 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 96.92 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 96.89 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 96.83 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.83 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.81 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.77 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.76 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 96.76 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 96.71 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.71 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 96.69 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.68 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 96.64 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.56 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.54 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.51 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 96.51 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 96.49 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 96.47 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 96.35 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.3 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 96.23 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.22 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.19 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.18 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.12 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 96.08 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.05 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 96.04 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.03 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.99 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 95.93 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 95.75 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.68 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.64 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 95.6 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 95.59 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 95.59 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 95.48 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 95.47 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.42 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.4 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.39 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.37 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 95.35 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.28 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.24 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 95.16 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.11 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 95.09 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 95.05 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.03 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.92 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.89 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 94.85 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 94.75 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 94.67 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 94.65 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 94.63 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 94.62 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 94.56 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 94.5 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 94.39 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.38 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 94.37 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.29 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 94.2 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 94.19 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 94.13 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 94.12 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 94.1 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 94.08 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.07 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.05 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 94.04 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 94.04 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.03 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 93.98 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 93.92 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.87 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 93.83 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.78 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 93.69 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 93.67 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 93.67 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.59 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.5 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 93.46 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 93.46 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.43 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.42 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.37 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.36 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.29 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 93.27 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 93.18 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 93.14 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 93.02 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 93.0 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 92.69 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 92.65 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 92.61 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 92.6 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 92.59 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 92.43 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 92.3 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 92.23 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.22 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 92.15 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.12 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 92.08 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 91.99 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 91.92 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.92 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 91.92 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.89 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 91.89 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 91.87 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 91.82 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 91.8 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 91.76 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 91.73 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 91.69 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 91.69 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 91.64 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.61 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 91.58 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 91.52 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 91.27 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.22 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 91.18 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 91.15 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 91.15 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 91.12 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 91.11 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 90.98 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 90.88 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.87 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.81 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 90.69 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.68 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.61 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 90.58 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.52 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 90.47 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 90.35 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 90.21 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 89.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 89.74 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 89.71 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 89.65 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 89.46 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 89.36 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 89.28 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.1 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 89.09 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 89.01 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 88.89 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 88.82 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.75 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 88.69 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 88.6 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 88.54 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 88.49 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.32 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 88.18 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 88.08 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 88.05 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 88.03 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 87.94 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 87.94 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 87.87 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 87.42 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 87.4 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 87.4 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 87.33 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 87.32 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 87.06 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 87.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 86.81 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 86.55 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 86.37 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 86.33 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 86.14 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 86.02 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 85.98 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 85.98 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 85.92 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 85.61 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.56 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 85.18 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 85.16 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.01 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 84.69 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 84.6 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.44 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 84.29 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 84.13 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 84.0 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 83.9 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.86 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 83.68 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 83.65 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.62 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 83.09 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 83.05 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 82.99 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 82.86 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 82.81 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 82.78 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 82.52 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 82.27 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 81.94 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 81.87 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 81.77 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 81.77 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 81.73 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 81.55 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 81.12 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 81.11 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 81.09 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 80.9 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 80.8 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 80.8 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 80.8 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 80.49 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 80.47 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 80.4 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 80.02 |
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=9.3e-30 Score=207.92 Aligned_cols=175 Identities=20% Similarity=0.309 Sum_probs=153.3
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++++++++++
T Consensus 2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~ 80 (183)
T d1pqwa_ 2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV 80 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence 589999999999999999899999999999999999999999999999999999999999999999 9999999999987
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc-
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY- 291 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (347)
++.+++++.+++ ++|++||++|++.++.++++++++|+++.+|...... ........+.+++++.++.....
T Consensus 81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 154 (183)
T d1pqwa_ 81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA-----DASLGLAALAKSASFSVVDLDLNL 154 (183)
T ss_dssp -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT-----TCEEEGGGGTTTCEEEECCHHHHH
T ss_pred -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCC-----CcccchHHHhCCcEEEEEEcccee
Confidence 999999999988 9999999999999999999999999999999765531 12233444567888887765432
Q ss_pred ---cchhHHHHHHHHHHHHCCceeeee
Q 019012 292 ---LHLYPRFLDYVISNYKQGKIVYVE 315 (347)
Q Consensus 292 ---~~~~~~~~~~~~~~l~~g~i~~~~ 315 (347)
+....+.++++.+++++|+|+|.+
T Consensus 155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P 181 (183)
T d1pqwa_ 155 KLQPARYRQLLQHILQHVADGKLEVLP 181 (183)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence 455578899999999999999864
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.96 E-value=6e-29 Score=202.57 Aligned_cols=178 Identities=43% Similarity=0.747 Sum_probs=152.8
Q ss_pred ChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeee
Q 019012 130 PLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 130 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
|++...++++++++|||++|.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.++++ ++|++++++
T Consensus 2 P~~~~l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~ 80 (182)
T d1v3va2 2 PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFN 80 (182)
T ss_dssp CGGGGGTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEE
T ss_pred CHHHHHHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhcc
Confidence 4565567899999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cCCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCC-CCccchHHHhhcceEeeccc
Q 019012 210 YNDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDP-QGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 210 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 287 (347)
++++ ++.+.+.+.+.+ ++|+|||++|++.++.++++++++|+++.+|.....+.... ....+...++.+++++.|+.
T Consensus 81 ~~~~-~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~ 159 (182)
T d1v3va2 81 YKTV-NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFI 159 (182)
T ss_dssp TTSC-SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECC
T ss_pred cccc-cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEE
Confidence 9887 777777776666 99999999999999999999999999999997655322111 23455678999999999988
Q ss_pred cccc-cchhHHHHHHHHHHHHCC
Q 019012 288 QSDY-LHLYPRFLDYVISNYKQG 309 (347)
Q Consensus 288 ~~~~-~~~~~~~~~~~~~~l~~g 309 (347)
..++ ++...+.++++++++++|
T Consensus 160 ~~~~~~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 160 VYRWQGDVREKALRDLMKWVLEG 182 (182)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHTT
T ss_pred EeccChHHHHHHHHHHHHHHhCc
Confidence 7666 444567789999999876
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.9e-29 Score=198.20 Aligned_cols=143 Identities=21% Similarity=0.327 Sum_probs=127.8
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |+|+ .+.++. +.|.|+|. ++||||||.|++||++|++.++|.+.....+|.++|||++| +|
T Consensus 3 MkAv~~~~~--G~p~--~l~~~~-~~~~P~~~---~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G--~V 72 (150)
T d1yb5a1 3 MRAVRVFEF--GGPE--VLKLRS-DIAVPIPK---DHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAG--VI 72 (150)
T ss_dssp EEEEEESSC--SSGG--GEEEEE-EEECCCCC---TTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEE--EE
T ss_pred eeEEEEEcc--CCcc--eEEEEe-ecCCCCCC---CCeEEEEEEEecCcccchhhhcCCcCccccccccCccceee--ee
Confidence 799999999 8885 455443 47888775 99999999999999999999999877667789999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYV 161 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~v 161 (347)
+++|+++++|++||||++. |+|+||+.+++++ ++++ |++ ++++ +|+++..+.|+++++...+....|+++
T Consensus 73 ~~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~i-P~~---ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~v 147 (150)
T d1yb5a1 73 EAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEK---LKPVIGSQYPLEKVAEAHENIIHGSGATGKMI 147 (150)
T ss_dssp EEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTT---CCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEE
T ss_pred EeecceeeccccCccccccccccccccccccccccc-cccc-cCC---CCHHHHHHhhhhhhhehhhheEEcCcccCCEE
Confidence 9999999999999999976 7999999999998 9999 999 8886 788999999999999888999999999
Q ss_pred EEE
Q 019012 162 FVS 164 (347)
Q Consensus 162 LI~ 164 (347)
||+
T Consensus 148 liL 150 (150)
T d1yb5a1 148 LLL 150 (150)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=8e-29 Score=200.41 Aligned_cols=165 Identities=24% Similarity=0.343 Sum_probs=144.0
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
+++ +|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+
T Consensus 2 s~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~ 80 (174)
T d1yb5a2 2 DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNH 80 (174)
T ss_dssp CHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred CHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCccccccc
Confidence 554 88999999999999988899999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 211 NDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
++. ++.+.+++.+++ ++|++||++|++.++.++++++++|+++.+|.... ...+...++.+++++.|+...
T Consensus 81 ~~~-~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~~~ 152 (174)
T d1yb5a2 81 REV-NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLF 152 (174)
T ss_dssp TST-THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGG
T ss_pred ccc-cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEEec
Confidence 987 999999999988 89999999999999999999999999999986432 245567888999999998764
Q ss_pred cccchhHHHHHHHHHHHHC
Q 019012 290 DYLHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~ 308 (347)
.. ..+.++++.+++++
T Consensus 153 ~~---~~~~~~~~~~~l~~ 168 (174)
T d1yb5a2 153 SS---TKEEFQQYAAALQA 168 (174)
T ss_dssp GC---CHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH
Confidence 42 13445556555554
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=9.9e-28 Score=195.01 Aligned_cols=172 Identities=24% Similarity=0.267 Sum_probs=141.6
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
|++ +|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.++++ ++|+++++|+
T Consensus 2 sfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~ 80 (179)
T d1qora2 2 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINY 80 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEET
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEEC
Confidence 565 89999999999999988889999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhc-ceEeecccc
Q 019012 211 NDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTK-RITMKGFLQ 288 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 288 (347)
+++ ++.++++++|++ ++|+++|+.|++.+..++++++++|+++.++...... ...+...+..+ .+.+....+
T Consensus 81 ~~~-d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~l 154 (179)
T d1qora2 81 REE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSL 154 (179)
T ss_dssp TTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCC-----CCBCTHHHHHTTSCEEECCCH
T ss_pred CCC-CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCc-----cccchhhhhccceEEEEeeEE
Confidence 987 999999999988 9999999999999999999999999999998765532 22223333322 233332222
Q ss_pred c---cccchhHHHHHHHHHHHHCCc
Q 019012 289 S---DYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 289 ~---~~~~~~~~~~~~~~~~l~~g~ 310 (347)
. ..++...+.++++++++++|.
T Consensus 155 ~~~~~~~~~~~~~~~~l~~lv~~Gv 179 (179)
T d1qora2 155 QGYITTREELTEASNELFSLIASGV 179 (179)
T ss_dssp HHHCCSHHHHHHHHHHHHHHHHTTS
T ss_pred eeecCCHHHHHHHHHHHHHHHHCcC
Confidence 1 123445667788888888873
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=4.5e-28 Score=195.90 Aligned_cols=143 Identities=20% Similarity=0.203 Sum_probs=122.4
Q ss_pred ccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCcee
Q 019012 2 MEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVE 81 (347)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~ 81 (347)
+|+.+|||++++++ |+| ++++ ++|.|.+. ++||||||.|++||++|++.++|.+......|.++|||++
T Consensus 1 ~~P~tMkA~v~~~~--g~p----l~l~--evp~P~~~---~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~ 69 (175)
T d1llua1 1 TLPQTMKAAVVHAY--GAP----LRIE--EVKVPLPG---PGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGV 69 (175)
T ss_dssp CCCSEEEEEEBCST--TSC----CEEE--EEECCCCC---TTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEE
T ss_pred CcchhcEEEEEEeC--CCC----CEEE--EeECCCCC---CCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcce
Confidence 47899999999998 765 4664 57777775 9999999999999999999999977656678999999988
Q ss_pred cceEEEEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCCC
Q 019012 82 GFGVSKVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIP 130 (347)
Q Consensus 82 G~g~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~ 130 (347)
| +|+++|+++++|++||||+.. |+|+||+.+++++ ++++ |++
T Consensus 70 G--~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~-~~~i-Pd~--- 142 (175)
T d1llua1 70 G--YVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY-VGIL-PKN--- 142 (175)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTT---
T ss_pred E--EEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHH-EEEC-CCC---
Confidence 8 999999999999999999742 5899999999998 9999 999
Q ss_pred hhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEE
Q 019012 131 LSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVS 164 (347)
Q Consensus 131 ~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~ 164 (347)
++++ ++++...+.|+++++ +.+ ..+|++|||+
T Consensus 143 l~~~~a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl 175 (175)
T d1llua1 143 VKATIHPGKLDDINQILDQM-RAG-QIEGRIVLEM 175 (175)
T ss_dssp CCCCEEEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred CChhHHHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence 7775 667778889999888 434 4579999985
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=1.5e-27 Score=194.83 Aligned_cols=179 Identities=34% Similarity=0.605 Sum_probs=145.5
Q ss_pred hhhhhhhcCChhhhHHHHHHhhcCCCCC--CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCee
Q 019012 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSG--EYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEA 207 (347)
Q Consensus 131 ~~~~~a~l~~~~~ta~~al~~~~~~~~~--~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~v 207 (347)
+|+...+++++++|||++|++.+++++| ++|||+||+|++|++++|+||.+|+ +|+++++++++...+.+++|++++
T Consensus 2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v 81 (187)
T d1vj1a2 2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA 81 (187)
T ss_dssp GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence 5776778999999999999999999987 8999999999999999999999999 567777777766666548999999
Q ss_pred eecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCC----CccchHHHhhcceEe
Q 019012 208 FNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQ----GIHNLFTLVTKRITM 283 (347)
Q Consensus 208 i~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~ 283 (347)
+|++++ ++.+.+++.++.++|++||++|++.++.++++++++|+++.+|..++.....+. .......+..+++++
T Consensus 82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~ 160 (187)
T d1vj1a2 82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR 160 (187)
T ss_dssp EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence 999997 999999999977999999999999999999999999999999975543211111 112234567789999
Q ss_pred eccccccccchhHHHHHHHHHHHHCCc
Q 019012 284 KGFLQSDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
.|+...++.+.+.+.++++.+++.+|+
T Consensus 161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 161 ERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 998877777777889999999999875
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=6.3e-28 Score=190.10 Aligned_cols=143 Identities=20% Similarity=0.191 Sum_probs=123.5
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
|++|||++++++ +++. .+..+++|.|+|. ++||||||+|+|||++|+..+.|.+.....+|+++|||++|
T Consensus 1 m~~~KA~v~~~~--~~~~----~~~i~~v~~P~~~---~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G- 70 (152)
T d1xa0a1 1 MSAFQAFVVNKT--ETEF----TAGVQTISMDDLP---EGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAG- 70 (152)
T ss_dssp CCEEEEEEEEEE--TTEE----EEEEEEEEGGGSC---SCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEE-
T ss_pred CCceEEEEEEec--CCce----EEEEEEccCCCCC---CCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeee-
Confidence 567999999998 7663 4555678888775 99999999999999999998888775556789999999877
Q ss_pred eEEEEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcC
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCS 154 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~ 154 (347)
+|++ .+++.|++||+|++. |+|+||+.+++++ ++++ |++ ++.++|++++.++|||.++...++
T Consensus 71 -~v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~-~~~i-P~~---l~~~aa~l~~a~~ta~~~~~~~~~ 142 (152)
T d1xa0a1 71 -VVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKG---LERIAQEISLAELPQALKRILRGE 142 (152)
T ss_dssp -EEEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTT---HHHHEEEEEGGGHHHHHHHHHHTC
T ss_pred -eeec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhc-cccC-CCC---CCHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766 566789999999876 7999999999999 9999 999 887788899999999999988888
Q ss_pred CCCCCEEEEEc
Q 019012 155 PKSGEYVFVSA 165 (347)
Q Consensus 155 ~~~~~~vLI~G 165 (347)
++ |++|||+|
T Consensus 143 ~~-G~tVL~l~ 152 (152)
T d1xa0a1 143 LR-GRTVVRLA 152 (152)
T ss_dssp CC-SEEEEECC
T ss_pred CC-CCEEEEcC
Confidence 75 99999986
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=8.2e-28 Score=192.93 Aligned_cols=170 Identities=23% Similarity=0.287 Sum_probs=135.1
Q ss_pred hh-hhhhcCChhhhHHHHHH---hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee
Q 019012 132 SY-HIGLLGMPGFTAYAGFH---EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA 207 (347)
Q Consensus 132 ~~-~~a~l~~~~~ta~~al~---~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v 207 (347)
|+ ++|+++.+++|||++++ +.++.++|++|||+||+|++|.+++|+|+..|++|+++++++++.++++ ++|++++
T Consensus 2 S~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~v 80 (176)
T d1xa0a2 2 TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEV 80 (176)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEE
T ss_pred CHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hccccee
Confidence 55 48999999999997754 4578899999999999999999999999999999999999999999999 9999999
Q ss_pred eecCCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 208 FNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 208 i~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
+|+++ .+.+.++...++++|+|||++|++.+..++++|+++|+++.+|...+. ....+...++.|++++.|..
T Consensus 81 i~~~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~~k~~~i~Gv~ 153 (176)
T d1xa0a2 81 LARED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGID 153 (176)
T ss_dssp EECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECC
T ss_pred eecch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHHHCCcEEEEEe
Confidence 99875 455555544445999999999999999999999999999999987653 34677888999999999975
Q ss_pred cccccchhHHHHHHHHHHHHCCceee
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGKIVY 313 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~i~~ 313 (347)
....+ .+...++.+.+. |.++|
T Consensus 154 ~~~~~---~~~~~~~~~~la-g~lkP 175 (176)
T d1xa0a2 154 SVYCP---MDLRLRIWERLA-GDLKP 175 (176)
T ss_dssp SSSCC---HHHHHHHHHHHH-TTTCC
T ss_pred CCcCC---HHHHHHHHHHHh-cccCC
Confidence 43322 333444555543 66665
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.95 E-value=5.5e-27 Score=189.31 Aligned_cols=167 Identities=24% Similarity=0.317 Sum_probs=147.4
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
+|.+++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.+++|++.++ ++|+++++|++++
T Consensus 6 aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~~ 83 (174)
T d1f8fa2 6 LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKTQ 83 (174)
T ss_dssp TGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTTS
T ss_pred HHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCCc
Confidence 78999999999999989899999999999997 9999999999999999 6778888999999999 9999999999987
Q ss_pred HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
++.+++++++++++|++|||+|+ ..++.++++++++|+++.+|..... .....+...++.+++++.|++..+..
T Consensus 84 -~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~----~~~~~~~~~~~~k~~~i~Gs~~g~~~ 158 (174)
T d1f8fa2 84 -DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSGS 158 (174)
T ss_dssp -CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred -CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCC----cccccCHHHHHHCCCEEEEEEecCCC
Confidence 89999999999899999999997 5789999999999999999875432 22356778899999999998876542
Q ss_pred chhHHHHHHHHHHHHCCc
Q 019012 293 HLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~ 310 (347)
. .++++++++++++|+
T Consensus 159 ~--~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 159 P--KKFIPELVRLYQQGK 174 (174)
T ss_dssp H--HHHHHHHHHHHHTTS
T ss_pred h--HHHHHHHHHHHHcCC
Confidence 2 567899999999885
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.94 E-value=7e-28 Score=195.27 Aligned_cols=130 Identities=17% Similarity=0.176 Sum_probs=112.6
Q ss_pred EEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecceEEEEeccCCCCCCCCCEEEE
Q 019012 27 IKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGFGVSKVVDSDNPNFKPGDLVAG 104 (347)
Q Consensus 27 ~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~ 104 (347)
++.+++|.|.+. ++||||||++++||++|++.+.+.... ...+|+++|||++| +|+++|+++++|++||||+.
T Consensus 13 l~~~e~~~P~~~---~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G--~Vv~vG~~v~~~~~GdrV~~ 87 (178)
T d1e3ja1 13 LRLEQRPIPEPK---EDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASG--TVVKVGKNVKHLKKGDRVAV 87 (178)
T ss_dssp EEEEECCCCCCC---TTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEE--EEEEECTTCCSCCTTCEEEE
T ss_pred EEEEEeECCCCC---CCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccce--EEEecCcccCCCCCCCEEEE
Confidence 444668888775 999999999999999999888775433 23558999999877 99999999999999999974
Q ss_pred e-------------------------------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhh
Q 019012 105 L-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEV 152 (347)
Q Consensus 105 ~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~ 152 (347)
. |+|+||+++|+++ ++++ |++ ++++ +|+++.++.|||+++ +.
T Consensus 88 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~---~~~~~aa~~~~~~~ta~~a~-~~ 161 (178)
T d1e3ja1 88 EPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDN---CNVKQLVTHSFKLEQTVDAF-EA 161 (178)
T ss_dssp CCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT---CCCGGGEEEEEEGGGHHHHH-HH
T ss_pred CcccccCCccccccCCccccccccceeccccccccceeeeecccc-eeeC-CCC---CCHHHHHHHHhHHHHHHHHH-HH
Confidence 2 6899999999998 9999 999 8875 788889999999998 66
Q ss_pred cCCCCCCEEEEEcCC
Q 019012 153 CSPKSGEYVFVSAAS 167 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~ 167 (347)
+++++|++|||+||+
T Consensus 162 ~~~~~g~~VlVig~C 176 (178)
T d1e3ja1 162 ARKKADNTIKVMISC 176 (178)
T ss_dssp HHHCCTTCSEEEEEC
T ss_pred hCCCCCCEEEEEccc
Confidence 899999999999974
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=7e-27 Score=188.26 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=117.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |+| +++ +++|.|.|. ++||||||++++||++|++.+++.+......|.++|||++| +|
T Consensus 1 MkA~v~~~~--g~p----l~i--~~v~~P~~~---~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G--~V 67 (171)
T d1rjwa1 1 MKAAVVEQF--KEP----LKI--KEVEKPTIS---YGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVG--IV 67 (171)
T ss_dssp CEEEEBSST--TSC----CEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEE--EE
T ss_pred CeEEEEecC--CCC----cEE--EEeECCCCC---CCeEEEEEEEeeccccceeeeecccccccccccccCCEEEE--EE
Confidence 899999998 755 455 458888775 99999999999999999998888776677889999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCCChhhhh
Q 019012 87 KVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYHI 135 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~ 135 (347)
+++|++++++++||||+.. |+|+||+++++++ ++++ |++ +++++
T Consensus 68 v~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~e~ 142 (171)
T d1rjwa1 68 EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDN---TIIEV 142 (171)
T ss_dssp EEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTT---CCEEE
T ss_pred EEecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHH-EEEC-CCC---CCHHH
Confidence 9999999999999999731 6899999999998 9999 999 78776
Q ss_pred hhcCChhhhHHHHHHhhcCCCCCCEEEEEcC
Q 019012 136 GLLGMPGFTAYAGFHEVCSPKSGEYVFVSAA 166 (347)
Q Consensus 136 a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga 166 (347)
|++. ...++++++. .+.+ +|++|||+|-
T Consensus 143 A~l~-~~~~~~~~~~-~~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 143 QPLE-KINEVFDRML-KGQI-NGRVVLTLED 170 (171)
T ss_dssp EEGG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred HHHH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence 6664 5667787773 3555 5999999983
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.5e-26 Score=181.09 Aligned_cols=138 Identities=14% Similarity=0.141 Sum_probs=116.9
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEEE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVSK 87 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v~ 87 (347)
+.+.++++ |.|+ .+++ .+.|.|.|. ++||+|||.|++||++|++++.|.+. ....|.++|||++| +|+
T Consensus 2 ~~i~~~~~--G~pe--~l~~--~e~~~P~p~---~~eVlVkv~a~~in~~D~~~~~G~~~-~~~~p~~~G~e~~G--~V~ 69 (147)
T d1qora1 2 TRIEFHKH--GGPE--VLQA--VEFTPADPA---ENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAG--IVS 69 (147)
T ss_dssp EEEEBSSC--CSGG--GCEE--EECCCCCCC---TTEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEE--EEE
T ss_pred eEEEEccc--CCCc--eeEE--EEecCCCCC---CCEEEEEEEEecccceeeeeecCCCC-CCcceeeecccccc--cee
Confidence 56888998 9886 4555 557778774 99999999999999999999998763 45568999999888 999
Q ss_pred EeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhh---hhhcCChhhhHHHHHHhhcCCCCCCE
Q 019012 88 VVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYH---IGLLGMPGFTAYAGFHEVCSPKSGEY 160 (347)
Q Consensus 88 ~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~---~a~l~~~~~ta~~al~~~~~~~~~~~ 160 (347)
++|+++++|++||||+.. |+|+||+.++++. ++++ |++ ++++ +++++...+++++++.+ .++++|++
T Consensus 70 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~~-P~~---~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~ 143 (147)
T d1qora1 70 KVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAA---IKVDVAEQQKYPLKDAQRAHEILE-SRATQGSS 143 (147)
T ss_dssp EECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTT---SCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCC
T ss_pred eeeeecccccccceeeeeccccccceeEEEEehHH-eEEc-Ccc---cchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCE
Confidence 999999999999999743 8999999999998 9999 998 6552 45667788889998855 68999999
Q ss_pred EEE
Q 019012 161 VFV 163 (347)
Q Consensus 161 vLI 163 (347)
|||
T Consensus 144 VLI 146 (147)
T d1qora1 144 LLI 146 (147)
T ss_dssp EEE
T ss_pred EEe
Confidence 998
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.94 E-value=4.4e-26 Score=183.50 Aligned_cols=163 Identities=20% Similarity=0.252 Sum_probs=147.0
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
++|++++.+.|||+++ ++.++++|++|||+|++|++|++++|+++..|+ +|++++++++|++.++ ++|+++++++++
T Consensus 5 eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~ 82 (170)
T d1jvba2 5 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM 82 (170)
T ss_dssp HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence 6899999999999999 558999999999999889999999999999997 9999999999999999 999999999988
Q ss_pred HHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 213 ETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 213 ~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
. ++.+++++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|.+.. ....+...++.+++++.|++..+
T Consensus 83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~Gs~~~~ 155 (170)
T d1jvba2 83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSEIQFVGSLVGN 155 (170)
T ss_dssp S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHTCEEEECCSCC
T ss_pred c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCCcEEEEEecCC
Confidence 7 888899998887 89999999997 578999999999999999997543 24567788899999999998876
Q ss_pred ccchhHHHHHHHHHHHHCCc
Q 019012 291 YLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~ 310 (347)
.++++++++++++|+
T Consensus 156 -----~~d~~~~l~lv~~GK 170 (170)
T d1jvba2 156 -----QSDFLGIMRLAEAGK 170 (170)
T ss_dssp -----HHHHHHHHHHHHTTS
T ss_pred -----HHHHHHHHHHHHcCC
Confidence 677999999999885
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.94 E-value=8.6e-27 Score=187.12 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=117.6
Q ss_pred ceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceecceE
Q 019012 8 KQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEGFGV 85 (347)
Q Consensus 8 ~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~g~ 85 (347)
||++++++ |+| +++ +++|.|++.+ ++||||||.|++||++|++.+.|.+.. ....|.++|||++| +
T Consensus 1 kA~~~~~~--g~p----l~i--~~v~~P~~~~--~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G--~ 68 (171)
T d1h2ba1 1 KAARLHEY--NKP----LRI--EDVDYPRLEG--RFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG--Y 68 (171)
T ss_dssp CEEEESST--TSC----CEE--ECCCCCCCBT--TBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEE--E
T ss_pred CEEEEEeC--CCC----CEE--EEeeCCCCCC--CCEEEEEEEecccceeeehccCCCcccccCCccccccceeeee--e
Confidence 78999998 766 455 5577776545 899999999999999999998886532 23458999999888 9
Q ss_pred EEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCCChhhh-
Q 019012 86 SKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH- 134 (347)
Q Consensus 86 v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~- 134 (347)
|+++|+++++|++||||++. |+|+||+.+++++ ++++ |++ ++++
T Consensus 69 V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~---~~~e~ 143 (171)
T d1h2ba1 69 IEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKD---VRVEV 143 (171)
T ss_dssp EEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTT---CCCCE
T ss_pred eecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhc-ceec-CCC---CCHHH
Confidence 99999999999999999853 6899999999998 9999 999 8886
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEE
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFV 163 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI 163 (347)
++++..++.|||+++ +.+.+ .|++|||
T Consensus 144 aa~~~~~~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 144 DIHKLDEINDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp EEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred HHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence 778889999999999 55777 8999998
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.94 E-value=1.1e-26 Score=191.11 Aligned_cols=143 Identities=16% Similarity=0.188 Sum_probs=123.2
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
..+++||+++.+. +.| ++++ ++|.|.|. ++||||||.|+|||++|++.+.+.+. ....|.++|||++|
T Consensus 5 ~~~~~kAav~~~~--~~p----l~i~--ev~~P~p~---~~eVlIkv~a~giCgsD~~~~~g~~~-~~~~p~i~GhE~~G 72 (199)
T d1cdoa1 5 KVIKCKAAVAWEA--NKP----LVIE--EIEVDVPH---ANEIRIKIIATGVCHTDLYHLFEGKH-KDGFPVVLGHEGAG 72 (199)
T ss_dssp SCEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHHHHTTCC-TTSCSEECCCCEEE
T ss_pred CceEEEEEEEecC--CCC----cEEE--EEECCCCC---CCEEEEEEEEEEEecchhhhhhhccc-ccccccccccccce
Confidence 3467889999997 655 4665 47777674 99999999999999999999988653 34568999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|+++++|++||||+.. |+|+||
T Consensus 73 --~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey 150 (199)
T d1cdoa1 73 --IVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150 (199)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSE
T ss_pred --EEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEE
Confidence 999999999999999999742 689999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVS 164 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~ 164 (347)
+++++++ ++++ |++ ++++ +|++.+++.|+++++......+.|++|||+
T Consensus 151 ~~v~~~~-~~~i-P~~---~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 151 TVVNQIA-VAKI-DPS---VKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp EEEEGGG-EEEC-CTT---SCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEchHH-EEEC-CCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999998 9999 999 8875 789999999999999888888999999984
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=9.8e-27 Score=187.10 Aligned_cols=146 Identities=25% Similarity=0.352 Sum_probs=121.3
Q ss_pred hh-hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SY-HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~-~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
++ ++|+++++++|||++|. .+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++|+
T Consensus 2 s~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~ 79 (171)
T d1iz0a2 2 SPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATY 79 (171)
T ss_dssp CHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEG
T ss_pred CHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeeh
Confidence 44 48899999999999995 589999999999999999999999999999999999999999999999 9999999998
Q ss_pred CCHHHHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 211 NDETDLVAALKRCFPQ-GIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
.+. .++.+.+ ++|++||++| +.++.++++++++|+++.+|...+. ....+...++.+++++.|++..
T Consensus 80 ~~~------~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~~ 147 (171)
T d1iz0a2 80 AEV------PERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLT 147 (171)
T ss_dssp GGH------HHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHH
T ss_pred hhh------hhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeCc
Confidence 752 2333334 8999999987 5789999999999999999976543 2345667888999999999876
Q ss_pred cc
Q 019012 290 DY 291 (347)
Q Consensus 290 ~~ 291 (347)
.+
T Consensus 148 ~~ 149 (171)
T d1iz0a2 148 PL 149 (171)
T ss_dssp HH
T ss_pred Ch
Confidence 54
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.93 E-value=1.6e-26 Score=189.45 Aligned_cols=143 Identities=19% Similarity=0.196 Sum_probs=121.6
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
.+++|||++++++ |++ +++ +++|.|+|. ++||||||.++|||++|+++++|.+. ...+|.++|||++|
T Consensus 3 ~~~~~kAav~~~~--g~~----l~i--~evp~P~p~---~~eVLVkv~a~gic~sD~~~~~G~~~-~~~~p~v~GhE~~G 70 (197)
T d2fzwa1 3 EVIKCKAAVAWEA--GKP----LSI--EEIEVAPPK---AHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAG 70 (197)
T ss_dssp CCEEEEEEEBCST--TSC----CEE--EEEEECCCC---TTEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEE
T ss_pred CceEEEEEEEccC--CCC----CEE--EEEECCCCC---CCEEEEEEEEecCCCCcHHHHcCCcc-cccccccCCcceee
Confidence 3567999999998 766 456 457888775 99999999999999999999998653 34579999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|++|+.+++||+|+.. |+|+||
T Consensus 71 --~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey 148 (197)
T d2fzwa1 71 --IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY 148 (197)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred --EEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeE
Confidence 999999999999999999742 689999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVS 164 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~ 164 (347)
+++|+.+ ++++ |++ ++++ +|+++.++.|++.++.....-+.+++|||+
T Consensus 149 ~vvp~~~-~~~v-p~~---l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 149 TVVADIS-VAKI-DPL---IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp EEEEGGG-EEEC-CTT---SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred EEechHH-EEEC-CCC---CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 9999998 9999 998 7765 788999999999998655555788899884
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=2.1e-26 Score=175.64 Aligned_cols=127 Identities=19% Similarity=0.257 Sum_probs=110.4
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |++ +++ .++|.|.|. ++||+||++|++||++|++.++|.+.....+|+++|||++| +|
T Consensus 1 MkA~~~~~~--G~~----l~~--~e~~~p~p~---~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G--~V 67 (131)
T d1iz0a1 1 MKAWVLKRL--GGP----LEL--VDLPEPEAE---EGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVG--VV 67 (131)
T ss_dssp CEEEEECST--TSC----EEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEE--EE
T ss_pred CcEEEEccC--CCC----CEE--EEccCCCCC---CCEEEEEEEEEeccccccccccccccccccceeEeeeeeEE--ee
Confidence 799999998 765 455 557777774 99999999999999999999999887667789999999887 76
Q ss_pred EEeccCCCCCCCCCEEEEe---cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEE
Q 019012 87 KVVDSDNPNFKPGDLVAGL---TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVF 162 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vL 162 (347)
+||+|+++ |+|+||+.+++++ ++++ |++ ++++ +|+++..+.|||++|.+++ +.|++||
T Consensus 68 -----------vGd~V~~~~~~G~~aey~~v~~~~-~~~~-P~~---~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl 129 (131)
T d1iz0a1 68 -----------EGRRYAALVPQGGLAERVAVPKGA-LLPL-PEG---RPVVGPVFPFAEAEAAFRALLDRG--HTGKVVV 129 (131)
T ss_dssp -----------TTEEEEEECSSCCSBSEEEEEGGG-CEEC-CTT---CCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEE
T ss_pred -----------ccceEEEEeccCccceeeeeCHHH-eEEc-cCC---CCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEE
Confidence 49999988 8999999999999 9999 999 8886 7889999999999997766 4599998
Q ss_pred EE
Q 019012 163 VS 164 (347)
Q Consensus 163 I~ 164 (347)
++
T Consensus 130 ~l 131 (131)
T d1iz0a1 130 RL 131 (131)
T ss_dssp EC
T ss_pred EC
Confidence 74
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=1.6e-25 Score=179.38 Aligned_cols=164 Identities=23% Similarity=0.324 Sum_probs=141.2
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
+++ +|+++++++|||+++ +++++++|++|||+|+ |++|++++|+|+.+|++|++++++++|++.++ ++|+++++|+
T Consensus 2 ~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~ 78 (166)
T d1llua2 2 EFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNA 78 (166)
T ss_dssp CHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEET
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccc
Confidence 454 899999999999999 5589999999999996 99999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 211 NDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
++. ++.+.+++.+.+..++++++.+++.++.++++++++|+++.+|.+.. ....+...++.+++++.|+...+
T Consensus 79 ~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~ 151 (166)
T d1llua2 79 RQE-DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT 151 (166)
T ss_dssp TTS-CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC
T ss_pred cch-hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC
Confidence 986 78888887776545555555556789999999999999999997543 23567788999999999988776
Q ss_pred ccchhHHHHHHHHHHHHCCc
Q 019012 291 YLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~ 310 (347)
.+.++++++++++|.
T Consensus 152 -----~~d~~e~l~l~~~Gl 166 (166)
T d1llua2 152 -----RADLQEALDFAGEGL 166 (166)
T ss_dssp -----HHHHHHHHHHHHTTS
T ss_pred -----HHHHHHHHHHHHCcC
Confidence 667899999998873
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.93 E-value=9.1e-26 Score=184.55 Aligned_cols=173 Identities=19% Similarity=0.283 Sum_probs=140.3
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEE-cCCchHHHHHHHHHHHCCCEEEEEECChH----hHHHHHHHcCCC
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVS-AASGAVGQLVGQLAKLHGCYVVGSAGSSQ----KVDLLKNKLGFD 205 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~-Ga~g~~G~~ai~la~~~G~~V~~~~~~~~----~~~~~~~~~g~~ 205 (347)
|++ +|+++++++|||++|.+.+++++|+++||+ ||+|++|++++|+||++|++|++++++.+ +.++++ ++|++
T Consensus 2 s~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad 80 (189)
T d1gu7a2 2 TINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGAT 80 (189)
T ss_dssp CHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCS
T ss_pred CHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hcccc
Confidence 554 899999999999999888999999988886 77899999999999999999999886543 455677 99999
Q ss_pred eeeecCCH--HHHHHHHHHHC---CCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcc
Q 019012 206 EAFNYNDE--TDLVAALKRCF---PQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKR 280 (347)
Q Consensus 206 ~vi~~~~~--~~~~~~i~~~~---~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
+++++++. .++.+.+++.+ ++++|++||++|++.+..++++|+++|+++.+|...+. ....+...++.++
T Consensus 81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~~k~ 155 (189)
T d1gu7a2 81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKN 155 (189)
T ss_dssp EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSC
T ss_pred EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHHHCC
Confidence 99988643 12334444443 44899999999999999999999999999999976542 2356677888999
Q ss_pred eEeeccccccc----cchhHHHHHHHHHHHHCCc
Q 019012 281 ITMKGFLQSDY----LHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 281 ~~~~~~~~~~~----~~~~~~~~~~~~~~l~~g~ 310 (347)
+++.|++...+ ++...+.++++++++++|+
T Consensus 156 ~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 156 FTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp CEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 99999876543 4445678889999998875
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.93 E-value=9.8e-26 Score=181.42 Aligned_cols=169 Identities=20% Similarity=0.150 Sum_probs=137.7
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeee
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
|++ ++.++++++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.+++|++.++ ++|+++++|
T Consensus 2 p~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~ 78 (174)
T d1jqba2 2 PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILN 78 (174)
T ss_dssp CHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEEC
T ss_pred CHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCcccccc
Confidence 555 666889999999998 6699999999999986 9999999999999999 8999999999999999 999999999
Q ss_pred cCCHHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccc
Q 019012 210 YNDETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFL 287 (347)
Q Consensus 210 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
++++ ++.+.+++.+++ ++|++|||+|+ ..+++++++++++|+++.+|.+..... ............++.++.++.
T Consensus 79 ~~~~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~--~~~~~~~~~~~~~~~~i~g~~ 155 (174)
T d1jqba2 79 YKNG-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDA--LLIPRVEWGCGMAHKTIKGGL 155 (174)
T ss_dssp GGGS-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSE--EEEETTTTGGGTBCCEEEEBC
T ss_pred ccch-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCc--CcCcHhHHHHHhCccEEEEec
Confidence 9886 889999999988 89999999997 578999999999999999997543210 000111233445677888776
Q ss_pred cccccchhHHHHHHHHHHHHCCc
Q 019012 288 QSDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
.... ...++++.+++++|+
T Consensus 156 ~~~~----r~~~e~l~~li~~gk 174 (174)
T d1jqba2 156 CPGG----RLRAERLRDMVVYNR 174 (174)
T ss_dssp CCCH----HHHHHHHHHHHHTTS
T ss_pred CCCC----cccHHHHHHHHHcCC
Confidence 5441 345677888888764
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=3.2e-26 Score=186.56 Aligned_cols=147 Identities=12% Similarity=0.054 Sum_probs=121.0
Q ss_pred CccccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 1 MMEQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 1 ~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
|-.|.+|||+++..+ ++.. .+++.+ ++ |.|.+ |+||||||.|+|||++|++.+.|.+. ....|+++|||+
T Consensus 1 m~~P~~~ka~~~~~~--~~~~--~~~~~~--~~-p~p~~--~~eVlVkv~a~giC~sDl~~~~g~~~-~~~~P~i~GHE~ 70 (192)
T d1piwa1 1 MSYPEKFEGIAIQSH--EDWK--NPKKTK--YD-PKPFY--DHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEI 70 (192)
T ss_dssp CCTTTCEEEEEECCS--SSTT--SCEEEE--EC-CCCCC--TTEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCE
T ss_pred CCCCceeEEEEEeCC--CcCC--cceEee--cc-CCCCC--CCeEEEEEeeeCCCcchHHHHcCCCC-CCCCCcCccccc
Confidence 778899999999998 6553 445554 33 22445 99999999999999999999988653 345689999998
Q ss_pred ecceEEEEeccCC-CCCCCCCEEEE--------------------------------------ecCcceeEEeeccccce
Q 019012 81 EGFGVSKVVDSDN-PNFKPGDLVAG--------------------------------------LTGWEEYSLIRKTEQLR 121 (347)
Q Consensus 81 ~G~g~v~~vg~~v-~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 121 (347)
+| +|+++|+++ +.+++||||.. .|+|+||+++++++ ++
T Consensus 71 ~G--~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~-~~ 147 (192)
T d1piwa1 71 VG--KVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VV 147 (192)
T ss_dssp EE--EEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EE
T ss_pred cc--chhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHH-eE
Confidence 88 999999987 67999999952 16899999999998 99
Q ss_pred ecCCCCCCChhhhhhhcCCh-hhhHHHHHHhhcCCCCCCEEEEEc
Q 019012 122 KIQPDHHIPLSYHIGLLGMP-GFTAYAGFHEVCSPKSGEYVFVSA 165 (347)
Q Consensus 122 ~i~p~~~~~~~~~~a~l~~~-~~ta~~al~~~~~~~~~~~vLI~G 165 (347)
++ |++ ++++.|++... +.|||+++ +.++++++++|||+.
T Consensus 148 ~i-P~~---l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~ 187 (192)
T d1piwa1 148 PI-PEN---IWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGYD 187 (192)
T ss_dssp EC-CTT---CCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred EC-CCC---CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence 99 999 88876667665 56999999 579999999999874
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.93 E-value=2.1e-26 Score=190.31 Aligned_cols=139 Identities=19% Similarity=0.312 Sum_probs=118.1
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
+++|||+++.++ |+| ++++ ++|.|+|. ++||||||.++|||++|++.++|.+. ...|.++|||++|
T Consensus 6 ~~~~KAaV~~~~--g~p----l~i~--evp~P~p~---~geVlVkv~a~gic~sD~~~~~G~~~--~~~P~v~GHE~~G- 71 (202)
T d1e3ia1 6 VIKCKAAIAWKT--GSP----LCIE--EIEVSPPK---ACEVRIQVIATCVCPTDINATDPKKK--ALFPVVLGHECAG- 71 (202)
T ss_dssp CEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTEEEEEEEEEECCHHHHHTTCTTSC--CCSSBCCCCEEEE-
T ss_pred eEEEEEEEEccC--CCC----CEEE--EEECCCCC---CCEEEEEEEEEEEeccccceeeeecc--cccccccccccce-
Confidence 568999999998 765 4554 57777775 99999999999999999999998653 4569999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe-------------------------------------------------------cCc
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL-------------------------------------------------------TGW 108 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~-------------------------------------------------------g~~ 108 (347)
+|+++|++|+++++||||++. |+|
T Consensus 72 -~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~f 150 (202)
T d1e3ia1 72 -IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSF 150 (202)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred -EEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCc
Confidence 999999999999999999752 689
Q ss_pred ceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEc
Q 019012 109 EEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSA 165 (347)
Q Consensus 109 ~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~G 165 (347)
+||+++++.+ ++++ |++ ++++ ++++.+++.++++++.. +++|++|.|..
T Consensus 151 aey~~v~~~~-l~~l-P~~---~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~ 200 (202)
T d1e3ia1 151 SQYTVVSEAN-LARV-DDE---FDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL 200 (202)
T ss_dssp BSEEEEEGGG-EEEC-CTT---SCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred eEEEEEehhh-EEEC-CCC---CCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence 9999999998 9999 999 7776 67888889999988833 46899887764
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=3.8e-25 Score=179.87 Aligned_cols=164 Identities=24% Similarity=0.287 Sum_probs=138.7
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
+|.+.++++|||+++.+..++++|++|||+|+ |++|++++|+|++.|+ +|++++++++|++.++ ++|+++++|+++.
T Consensus 6 ~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~ 83 (182)
T d1vj0a2 6 LAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRET 83 (182)
T ss_dssp HHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred HHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEecccc
Confidence 78889999999999988889999999999996 9999999999999999 8999999999999999 9999999999875
Q ss_pred --HHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccc-hHHHhhcceEeecccc
Q 019012 214 --TDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHN-LFTLVTKRITMKGFLQ 288 (347)
Q Consensus 214 --~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 288 (347)
.+..+.+++.+++ ++|+||||+|+ ..++.++++++++|+++.+|..... .....+ ...++.+++++.|++.
T Consensus 84 ~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~l~~k~l~i~G~~~ 159 (182)
T d1vj0a2 84 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ----DPVPFKVYEWLVLKNATFKGIWV 159 (182)
T ss_dssp CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC----CCEEECHHHHTTTTTCEEEECCC
T ss_pred chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC----CccccccHHHHHHCCcEEEEEEe
Confidence 1344567788887 89999999997 5789999999999999999965432 112222 3457889999999988
Q ss_pred ccccchhHHHHHHHHHHHHCC
Q 019012 289 SDYLHLYPRFLDYVISNYKQG 309 (347)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~g 309 (347)
.+ .+.+++++++++++
T Consensus 160 ~~-----~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 160 SD-----TSHFVKTVSITSRN 175 (182)
T ss_dssp CC-----HHHHHHHHHHHHTC
T ss_pred CC-----HHHHHHHHHHHHHC
Confidence 76 56678888888764
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=4.4e-25 Score=177.78 Aligned_cols=161 Identities=21% Similarity=0.328 Sum_probs=139.9
Q ss_pred hhhhcCChhhhHHHHHHhhc-CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 134 HIGLLGMPGFTAYAGFHEVC-SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~-~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
++|+++++++|||+++.+.. .+++|++|||+|+ |++|++++|+++.+|+ +|++++++++|++.++ ++|++++++++
T Consensus 8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~ 85 (172)
T d1h2ba2 8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR 85 (172)
T ss_dssp HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence 58999999999999997755 4899999999996 9999999999999998 8889999999999999 99999999998
Q ss_pred CHHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 212 DETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
++ + .+.+.+.+.+ ++|++|||+|+. .++.++++++++|+++.+|... ....+...++.+++++.|++..
T Consensus 86 ~~-~-~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~ 156 (172)
T d1h2ba2 86 RD-P-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG 156 (172)
T ss_dssp SC-H-HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred cc-H-HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence 74 4 4555566766 999999999975 7999999999999999999632 1356678899999999999887
Q ss_pred cccchhHHHHHHHHHHHHCCc
Q 019012 290 DYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~ 310 (347)
+ .+.++++++++++|+
T Consensus 157 ~-----~~d~~~~l~l~~~GK 172 (172)
T d1h2ba2 157 N-----YVELHELVTLALQGK 172 (172)
T ss_dssp C-----HHHHHHHHHHHHTTS
T ss_pred C-----HHHHHHHHHHHHcCC
Confidence 7 567899999999885
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=4e-25 Score=177.58 Aligned_cols=166 Identities=23% Similarity=0.288 Sum_probs=146.4
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
|++ +|+++++++|||+++ +..++++|++|||+|+ |++|++++|+++..|++|++++.+++|+++++ ++|++.++++
T Consensus 2 s~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~ 78 (168)
T d1rjwa2 2 SFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNP 78 (168)
T ss_dssp CHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECT
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceeccc
Confidence 554 899999999999999 4588999999999985 99999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 211 NDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
++. ++...+++.+.+..|+++++.+...++.++++++++|+++.+|.... ....+...++.+++++.|+....
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~ 151 (168)
T d1rjwa2 79 LKE-DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGT 151 (168)
T ss_dssp TTS-CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC
T ss_pred ccc-hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHCCcEEEEEeeCC
Confidence 987 88889999888766676666666789999999999999999997544 23567788999999999988766
Q ss_pred ccchhHHHHHHHHHHHHCCcee
Q 019012 291 YLHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~i~ 312 (347)
.+.++++++++++|+++
T Consensus 152 -----~~~~~~~l~l~~~Gkik 168 (168)
T d1rjwa2 152 -----RKDLQEALQFAAEGKVK 168 (168)
T ss_dssp -----HHHHHHHHHHHHTTSCC
T ss_pred -----HHHHHHHHHHHHhCCCC
Confidence 67799999999999885
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.92 E-value=1.8e-25 Score=182.58 Aligned_cols=139 Identities=16% Similarity=0.184 Sum_probs=111.2
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
|.+|+|.++.+. |++ +++++ +|.|+|. ++||||||.+++||++|++.+.|.+. ..+|.|+|||++|
T Consensus 1 ~k~~~Aav~~~~--g~~----l~l~~--v~~P~p~---~geVlVkv~a~gic~sD~~~~~G~~~--~~~P~i~GHE~~G- 66 (194)
T d1f8fa1 1 LKDIIAAVTPCK--GAD----FELQA--LKIRQPQ---GDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSG- 66 (194)
T ss_dssp CEEEEEEEBCST--TCC----CEEEE--EEECCCC---TTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEE-
T ss_pred CceeEEEEEcCC--CCC----cEEEE--eeCCCCC---CCEEEEEEEEEEecCchHhhhhhccc--ccCCcccccceEE-
Confidence 456899999987 544 56654 7777775 99999999999999999999998653 4579999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe----------------------------------------------------cCccee
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL----------------------------------------------------TGWEEY 111 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~ 111 (347)
+|+++|+++++|++||||+.. |+|+||
T Consensus 67 -~V~~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~ 145 (194)
T d1f8fa1 67 -IIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATY 145 (194)
T ss_dssp -EEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSE
T ss_pred -EeeecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeecccccccccccee
Confidence 999999999999999999641 357778
Q ss_pred EEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEE
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCY-VVG 187 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~-V~~ 187 (347)
+++++.+ ++++ |++ ++++ +.+++.| .|++|++++|+++.+|++ |++
T Consensus 146 ~~v~~~~-~~~i-p~~---i~~~------------------------~~~~i~g-~g~~g~~aiq~a~~~g~~~iia 192 (194)
T d1f8fa1 146 ALSRENN-TVKV-TKD---FPFD------------------------QLVKFYA-FDEINQAAIDSRKGITLKPIIK 192 (194)
T ss_dssp EEEEGGG-EEEE-CTT---CCGG------------------------GGEEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred EEEehHH-EEEC-CCC---CCcc------------------------cEEEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence 8888777 7787 777 5532 2344555 599999999999999995 544
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.92 E-value=3.5e-28 Score=197.00 Aligned_cols=159 Identities=16% Similarity=0.162 Sum_probs=133.5
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC---------CCCCCC
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS---------SYIPPF 74 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~---------~~~~p~ 74 (347)
|.+|||++++++ |+|. ..+++...++|.|.+. ++||||||+|++||++|++.++|.+.. ...+|.
T Consensus 1 m~t~kA~v~~~~--G~p~-~~l~l~~~~~p~p~~~---~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~ 74 (175)
T d1gu7a1 1 MITAQAVLYTQH--GEPK-DVLFTQSFEIDDDNLA---PNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAA 74 (175)
T ss_dssp CEEEEEEEESSC--SCHH-HHCEEEEEEECTTSCC---TTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBE
T ss_pred CceeEEEEEccC--CCcc-cccEEEEEECCCCCCC---cCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCc
Confidence 467999999998 8874 4577888889998775 999999999999999999998886532 124578
Q ss_pred CCCCceecceEEEEeccCCCCCCCCCEEEEe----cCcceeEEeeccccceecCCCCCCChhhhhhhcCChhhhHHHHHH
Q 019012 75 VPGQPVEGFGVSKVVDSDNPNFKPGDLVAGL----TGWEEYSLIRKTEQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFH 150 (347)
Q Consensus 75 i~G~e~~G~g~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~ 150 (347)
++|+|++| +|+++|.++.+++.||+|... |+|+||+.+++++ ++++ |++ ++.++ +++...+|||+++.
T Consensus 75 v~G~e~~g--~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~-~~~i-P~~---~~~~~-a~~~~~~ta~~~l~ 146 (175)
T d1gu7a1 75 PCGNEGLF--EVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNP---AQSKA-NGKPNGLTDAKSIE 146 (175)
T ss_dssp ECCSCCEE--EEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCH---HHHHH-TTCSCCCCCCCCEE
T ss_pred cccccccc--ccccccccccccccccceeccccccccccceeeehhhh-ccCC-Ccc---chhhh-hccchHHHHHHHHH
Confidence 89999777 999999999999999999865 7999999999999 9999 998 77544 44567889998875
Q ss_pred h-hcCCCCCCEEEEEc-CCchHHHHHHH
Q 019012 151 E-VCSPKSGEYVFVSA-ASGAVGQLVGQ 176 (347)
Q Consensus 151 ~-~~~~~~~~~vLI~G-a~g~~G~~ai~ 176 (347)
. ..++++|++|||.| |+|++|++++|
T Consensus 147 ~~~~~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 147 TLYDGTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp EECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred HHhcCCCCCCEEEEECccchhhhheEEe
Confidence 4 46799999999998 55789988776
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.3e-25 Score=181.14 Aligned_cols=139 Identities=19% Similarity=0.201 Sum_probs=114.3
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCC--CCCCCCCCCCceec
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTS--SYIPPFVPGQPVEG 82 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~--~~~~p~i~G~e~~G 82 (347)
..|.|++++++ + ++++ +++|.|++. ++||||||.|++||++|++.+++...+ ...+|.++|||++|
T Consensus 6 p~~~a~V~~gp--~-----~l~l--~evp~P~p~---~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G 73 (185)
T d1pl8a1 6 PNNLSLVVHGP--G-----DLRL--ENYPIPEPG---PNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASG 73 (185)
T ss_dssp CCCEEEEEEET--T-----EEEE--EECCCCCCC---TTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEE
T ss_pred CCCEEEEEeCC--C-----eEEE--EEeECCCCC---CCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeee
Confidence 46789999986 3 3444 568888775 999999999999999999988764322 34568999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe-------------------------------cCcceeEEeeccccceecCCCCCCCh
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL-------------------------------TGWEEYSLIRKTEQLRKIQPDHHIPL 131 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~ 131 (347)
+|+++|+++++|++||||+.. |+|+||+++++++ ++++ |++ +
T Consensus 74 --~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~-~~~l-P~~---~ 146 (185)
T d1pl8a1 74 --TVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDN---V 146 (185)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTT---C
T ss_pred --eEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHH-EEEC-CCC---C
Confidence 999999999999999999842 5799999999998 9999 999 8
Q ss_pred hhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEE
Q 019012 132 SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVS 164 (347)
Q Consensus 132 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~ 164 (347)
+++.|++ .++.+|++++ +..++++|++|||.
T Consensus 147 ~~~~aa~-~pl~~a~~a~-~~~~~~~G~~VlIg 177 (185)
T d1pl8a1 147 KPLVTHR-FPLEKALEAF-ETFKKGLGLKIMLK 177 (185)
T ss_dssp GGGEEEE-EEGGGHHHHH-HHHHTTCCSEEEEE
T ss_pred CHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEE
Confidence 8875433 4567888887 55788999999993
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.92 E-value=2.2e-24 Score=173.48 Aligned_cols=165 Identities=19% Similarity=0.248 Sum_probs=137.2
Q ss_pred hhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 131 ~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
+|++.|++..++++||+++ +++++++|++|||+| +|++|++++|+|+.+|++|++++++++|++.++ ++|++.+++.
T Consensus 1 VS~e~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVV 77 (170)
T ss_dssp SCHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEec
Confidence 3677778888999999999 668999999999998 599999999999999999999999999999999 9999876654
Q ss_pred CCH----HHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeec
Q 019012 211 NDE----TDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285 (347)
Q Consensus 211 ~~~----~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
+.. .+..+.+++..++++|++|||+|++ .++.++++++++|+++.+|.+.. ....++..++.+++++.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~g 151 (170)
T d1e3ja2 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKS 151 (170)
T ss_dssp CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEE
T ss_pred cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEE
Confidence 321 2455666666666999999999985 78999999999999999997543 235677889999999999
Q ss_pred cccccccchhHHHHHHHHHHHHCCc
Q 019012 286 FLQSDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
++... +.++++++++++|+
T Consensus 152 s~~~~------~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 152 VFRYC------NDYPIALEMVASGR 170 (170)
T ss_dssp CCSCS------SCHHHHHHHHHTTS
T ss_pred EECCH------HHHHHHHHHHHcCC
Confidence 86432 24678888988875
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.92 E-value=2.5e-25 Score=179.97 Aligned_cols=138 Identities=18% Similarity=0.191 Sum_probs=112.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCC-------CCCCCCCCCCCc
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFT-------SSYIPPFVPGQP 79 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~-------~~~~~p~i~G~e 79 (347)
|||++++++ |+| +++ +++|.|+|. ++||||||.++|||++|++.++|.+. ....+|+|+|||
T Consensus 1 MKA~~~~~~--G~p----l~i--~dv~~P~p~---~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE 69 (177)
T d1jvba1 1 MRAVRLVEI--GKP----LSL--QEIGVPKPK---GPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69 (177)
T ss_dssp CEEEEECST--TSC----CEE--EECCCCCCC---TTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCE
T ss_pred CeEEEEEeC--CCC----CEE--EEeeCCCCC---CCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccce
Confidence 899999999 866 455 457778775 99999999999999999999988642 234569999999
Q ss_pred eecceEEEEeccCCCCCCCCCEEEEe------------------------------cCcceeEEeeccccceecCCCCCC
Q 019012 80 VEGFGVSKVVDSDNPNFKPGDLVAGL------------------------------TGWEEYSLIRKTEQLRKIQPDHHI 129 (347)
Q Consensus 80 ~~G~g~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~ 129 (347)
++| +|+++|+++++|++||+|++. |+|+||+++++.+.++++ |+.
T Consensus 70 ~~G--~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~-- 144 (177)
T d1jvba1 70 IAG--KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRV-- 144 (177)
T ss_dssp EEE--EEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSS--
T ss_pred EEE--EEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCC--
Confidence 888 999999999999999999753 699999999877646676 666
Q ss_pred Chhhhhhh-cCChhhhHHHHHHhhcCCCCCCEEEE
Q 019012 130 PLSYHIGL-LGMPGFTAYAGFHEVCSPKSGEYVFV 163 (347)
Q Consensus 130 ~~~~~~a~-l~~~~~ta~~al~~~~~~~~~~~vLI 163 (347)
.+.++|+ +..++.+|++++ +..++ .|++|||
T Consensus 145 -~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 145 -KPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp -CCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred -ChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 4445444 456889999998 55665 5899987
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.1e-24 Score=175.33 Aligned_cols=166 Identities=19% Similarity=0.227 Sum_probs=139.3
Q ss_pred hhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeee
Q 019012 131 LSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 131 ~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
+|++.|++..++++|||++ +++++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|++.++ ++|++++++
T Consensus 1 vS~e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~ 77 (171)
T d1pl8a2 1 VTFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQ 77 (171)
T ss_dssp SCHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCccccc
Confidence 3677778889999999999 5689999999999996 9999999999999999 8999999999999999 999999988
Q ss_pred cCCHHHHHHHHH---HHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeec
Q 019012 210 YNDETDLVAALK---RCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKG 285 (347)
Q Consensus 210 ~~~~~~~~~~i~---~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
+.+. +..+..+ ...+.++|++|||+|++ .++.++++++++|+++.+|.+.. ....++..++.|++++.|
T Consensus 78 ~~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~G 150 (171)
T d1pl8a2 78 ISKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKG 150 (171)
T ss_dssp CSSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEE
T ss_pred cccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEE
Confidence 8764 4443333 33334899999999974 78999999999999999997653 235677889999999999
Q ss_pred cccccccchhHHHHHHHHHHHHCCcee
Q 019012 286 FLQSDYLHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~g~i~ 312 (347)
++... +.++++++++++|+|+
T Consensus 151 s~~~~------~~~~~al~li~~gkid 171 (171)
T d1pl8a2 151 VFRYC------NTWPVAISMLASKSVN 171 (171)
T ss_dssp CCSCS------SCHHHHHHHHHTTSCC
T ss_pred EeCCH------hHHHHHHHHHHcCCCC
Confidence 86432 2478899999999874
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.9e-24 Score=173.27 Aligned_cols=160 Identities=23% Similarity=0.304 Sum_probs=133.2
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
++|.+++.+.|+|+++ +.+++++|++|||+|+ |++|++++|+|+.+|+++++++.+++++++++ ++|+++++|+.+.
T Consensus 8 ~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~ 84 (168)
T d1uufa2 8 AVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA 84 (168)
T ss_dssp HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH
T ss_pred HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh
Confidence 4778999999999999 5699999999999996 99999999999999999999999999999999 9999999999985
Q ss_pred HHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccccc
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDYL 292 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
+... ...+++|++||++|+. .+..++++++++|+++.+|.+.. .....+...++.+++++.|+...+
T Consensus 85 -~~~~----~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~-- 152 (168)
T d1uufa2 85 -DEMA----AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG-- 152 (168)
T ss_dssp -HHHH----TTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC--
T ss_pred -hHHH----HhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecC--
Confidence 3221 1123799999999974 79999999999999999997544 233556778889999999998877
Q ss_pred chhHHHHHHHHHHHHCCce
Q 019012 293 HLYPRFLDYVISNYKQGKI 311 (347)
Q Consensus 293 ~~~~~~~~~~~~~l~~g~i 311 (347)
.+.++++++++++++|
T Consensus 153 ---~~d~~e~l~l~a~~~I 168 (168)
T d1uufa2 153 ---IPETQEMLDFCAEHGI 168 (168)
T ss_dssp ---HHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHcCC
Confidence 6678899998887653
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=2.9e-25 Score=178.09 Aligned_cols=160 Identities=17% Similarity=0.133 Sum_probs=135.9
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDET 214 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 214 (347)
+|.+.+.+.|||+++ ++.++++|++|||+|+ |++|++++|+|+.+|++|++++++++|++.++ ++|+++++++.+..
T Consensus 6 AApl~cag~Ta~~al-~~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~~ 82 (168)
T d1piwa2 6 AAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEG 82 (168)
T ss_dssp HGGGGTHHHHHHHHH-HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGTS
T ss_pred HHHHHHHHHHHHHHH-HHhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccchH
Confidence 789999999999999 4589999999999996 99999999999999999999999999999999 99999999986531
Q ss_pred HHHHHHHHHCCCCccEEEeCCChh---hHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeeccccccc
Q 019012 215 DLVAALKRCFPQGIDIYFDNVGGE---MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSDY 291 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
++ .+...+++|+++||+++. .++.++++++++|+++.+|.+.. ....+...++.+++++.|+...+
T Consensus 83 ~~----~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~g~- 151 (168)
T d1piwa2 83 DW----GEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ------HEMLSLKPYGLKAVSISYSALGS- 151 (168)
T ss_dssp CH----HHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS------SCCEEECGGGCBSCEEEECCCCC-
T ss_pred HH----HHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccc------cccccHHHHHhCCcEEEEEeeCC-
Confidence 22 223335799999998853 47889999999999999997543 23456667888999999998877
Q ss_pred cchhHHHHHHHHHHHHCCcee
Q 019012 292 LHLYPRFLDYVISNYKQGKIV 312 (347)
Q Consensus 292 ~~~~~~~~~~~~~~l~~g~i~ 312 (347)
.+.++++++++++|+|+
T Consensus 152 ----~~~~~e~l~li~~gkIk 168 (168)
T d1piwa2 152 ----IKELNQLLKLVSEKDIK 168 (168)
T ss_dssp ----HHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHHHHHHHHhCCCC
Confidence 66799999999999875
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.92 E-value=2.5e-24 Score=173.20 Aligned_cols=168 Identities=19% Similarity=0.195 Sum_probs=135.2
Q ss_pred hhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecC
Q 019012 133 YHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYN 211 (347)
Q Consensus 133 ~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~ 211 (347)
.++|.|.+.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++++|++.++ ++|+++++|++
T Consensus 3 ~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~ 80 (174)
T d1p0fa2 3 LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPK 80 (174)
T ss_dssp GGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGG
T ss_pred HHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCC
Confidence 3589999999999999988899999999999996 9999999999999998 8999999999999999 99999999987
Q ss_pred CHHH-HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhc-CCeEEEEcccccccCCCCCCccchHHHhhcceEeecccc
Q 019012 212 DETD-LVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRD-HGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQ 288 (347)
Q Consensus 212 ~~~~-~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
+.++ ..+..+..+++++|++||++|+ ..++.++..+++ +|+++.+|.+... .....+... +.++.++.|+.+
T Consensus 81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~~~-~~~~~~i~Gs~~ 155 (174)
T d1p0fa2 81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDPLL-LLTGRSLKGSVF 155 (174)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECTHH-HHTTCEEEECSG
T ss_pred CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc----cccccCHHH-HhCCCEEEEEEe
Confidence 5412 4445555565699999999997 578888888877 5999999975432 122223333 446789999887
Q ss_pred ccccchhHHHHHHHHHHHHCCc
Q 019012 289 SDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
+++. .+++.++++++++|+
T Consensus 156 G~~~---~~d~~~lidl~~~gK 174 (174)
T d1p0fa2 156 GGFK---GEEVSRLVDDYMKKK 174 (174)
T ss_dssp GGCC---GGGHHHHHHHHHTTS
T ss_pred CCCC---HHHHHHHHHHHHcCC
Confidence 6542 346788888888875
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.92 E-value=4.5e-24 Score=172.69 Aligned_cols=169 Identities=22% Similarity=0.219 Sum_probs=137.2
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
++|.+++.+.|+|+++.+.+++++|++|||+|+ |++|++++|+++.+|+ +|++++++++|++.++ ++|+++++|+.+
T Consensus 5 ~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~ 82 (176)
T d2fzwa2 5 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQD 82 (176)
T ss_dssp HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCc
Confidence 388999999999999988899999999999997 8999999999999998 8899999999999999 999999998864
Q ss_pred H-HHHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 213 E-TDLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 213 ~-~~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
. ++..+.+++.+++++|++||++|+ ..++.+..+++++|+++.++..... ..........+.++.++.|+...+
T Consensus 83 ~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~ 158 (176)
T d2fzwa2 83 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQLVTGRTWKGTAFGG 158 (176)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGG
T ss_pred hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccc----cccccccHHHHHCCCEEEEEeeeC
Confidence 2 146667777777799999999997 4678888999999888877654332 122233344456788999988766
Q ss_pred ccchhHHHHHHHHHHHHCCc
Q 019012 291 YLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~ 310 (347)
... .+++.++++++++|+
T Consensus 159 ~~~--~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 159 WKS--VESVPKLVSEYMSKK 176 (176)
T ss_dssp CCH--HHHHHHHHHHHHTTS
T ss_pred CcH--HHHHHHHHHHHHcCC
Confidence 533 567888999998875
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.92 E-value=2.4e-24 Score=172.95 Aligned_cols=166 Identities=18% Similarity=0.188 Sum_probs=133.9
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
++|.|++.+.|+|+++.+.+++++|++|||+|+ |++|++++|+++.+|+ +|++++.+++|++.++ ++|+++++|++.
T Consensus 5 ~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~ 82 (174)
T d1e3ia2 5 RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPRE 82 (174)
T ss_dssp HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCcc
Confidence 388999999999999988899999999999985 9999999999999999 8999999999999999 999999998764
Q ss_pred HHHH-HHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcC-CeEEEEcccccccCCCCCCccchHHHhhcceEeeccccc
Q 019012 213 ETDL-VAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDH-GRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQS 289 (347)
Q Consensus 213 ~~~~-~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
.++. ....+...++++|++|||+|. ..+++++++++++ |+++.+|.+... ...+...++. +.++.|+...
T Consensus 83 ~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~------~~i~~~~~~~-~k~i~Gs~~G 155 (174)
T d1e3ia2 83 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE------MTIPTVDVIL-GRSINGTFFG 155 (174)
T ss_dssp CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE------EEEEHHHHHT-TCEEEECSGG
T ss_pred chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc------cccchHHHhc-cCEEEEEEee
Confidence 3123 333444444599999999997 5899999999996 999999975432 2344444443 5678888776
Q ss_pred cccchhHHHHHHHHHHHHCCc
Q 019012 290 DYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~g~ 310 (347)
++.. .+++.++++++++|+
T Consensus 156 s~~~--~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 156 GWKS--VDSVPNLVSDYKNKK 174 (174)
T ss_dssp GCCH--HHHHHHHHHHHHTTS
T ss_pred CCCh--HHHHHHHHHHHHCcC
Confidence 5422 567888888888875
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=3.1e-25 Score=179.11 Aligned_cols=138 Identities=16% Similarity=0.241 Sum_probs=113.7
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
|.++|||++++++ ++| ++++ ++|.|++. ++||||||.++|||++|++.++|.+. ...+|+++|||++|
T Consensus 1 m~~k~kA~v~~~~--~~p----l~i~--ev~~P~~~---~~evlVkv~a~gIC~sD~~~~~G~~~-~~~~P~vlGHE~~G 68 (184)
T d1vj0a1 1 MGLKAHAMVLEKF--NQP----LVYK--EFEISDIP---RGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAG 68 (184)
T ss_dssp CCEEEEEEEBCST--TSC----CEEE--EEEECCCC---TTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEE
T ss_pred CCceEEEEEEecC--CCC----cEEE--EeeCCCCC---CCEEEEEEEEECCCCCchhheeccCC-ccccccccceeeee
Confidence 5678899999998 655 4665 57777774 99999999999999999999998653 34579999999888
Q ss_pred ceEEEEeccCCC-----CCCCCCEEEE---------------------------------------ecCcceeEEee-cc
Q 019012 83 FGVSKVVDSDNP-----NFKPGDLVAG---------------------------------------LTGWEEYSLIR-KT 117 (347)
Q Consensus 83 ~g~v~~vg~~v~-----~~~~Gd~V~~---------------------------------------~g~~~~~~~v~-~~ 117 (347)
+|+++|++|+ ++++||+|+. .|+|+||+.++ ++
T Consensus 69 --~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~ 146 (184)
T d1vj0a1 69 --RVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPET 146 (184)
T ss_dssp --EEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTC
T ss_pred --eeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhH
Confidence 9999999885 4689999973 25899999996 56
Q ss_pred ccceecCCCCCCChhhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEc
Q 019012 118 EQLRKIQPDHHIPLSYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSA 165 (347)
Q Consensus 118 ~~~~~i~p~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~G 165 (347)
+ ++++ |++ ++++ .++++|++++ +++++++|++|||+.
T Consensus 147 ~-v~~i-p~~---l~~~-----~pl~~A~~a~-~~~~~~~G~~VlI~~ 183 (184)
T d1vj0a1 147 D-VLKV-SEK---ITHR-----LPLKEANKAL-ELMESREALKVILYP 183 (184)
T ss_dssp C-EEEE-CTT---CCEE-----EEGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred c-EEEC-CCC---CCHH-----HHHHHHHHHH-HHhCCCcCCEEEEee
Confidence 6 9999 999 7753 2466889998 668899999999974
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.91 E-value=5.3e-27 Score=192.61 Aligned_cols=151 Identities=21% Similarity=0.178 Sum_probs=120.8
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCC------CCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCce
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPK------GSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPV 80 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~------~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~ 80 (347)
+||++++++ + +++++ ++|.|+++ + ++||+|||.+++||++|++.++|.+. ..+|+++|||+
T Consensus 2 ~kA~v~~~~--~-----~le~~--e~~~P~~~~p~~~p~--~~eVlVkv~a~giC~sDl~~~~G~~~--~~~P~v~GHE~ 68 (201)
T d1kola1 2 NRGVVYLGS--G-----KVEVQ--KIDYPKMQDPRGKKI--EHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHEI 68 (201)
T ss_dssp EEEEEEEET--T-----EEEEE--EECCCCSBCTTSCBC--SSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCCE
T ss_pred cEEEEEeCC--C-----ceEEE--EecCCcccCCCCCCC--CCEEEEEEEEEEEcchhhhhhcCCcc--cccceecccee
Confidence 799999997 4 34554 46655432 3 69999999999999999999998653 46799999998
Q ss_pred ecceEEEEeccCCCCCCCCCEEEEe----------------------------------------cCcceeEEeec--cc
Q 019012 81 EGFGVSKVVDSDNPNFKPGDLVAGL----------------------------------------TGWEEYSLIRK--TE 118 (347)
Q Consensus 81 ~G~g~v~~vg~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~--~~ 118 (347)
+| +|+++|++|++|++||||+.. |+|+||+++|. .+
T Consensus 69 ~G--~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~ 146 (201)
T d1kola1 69 TG--EVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN 146 (201)
T ss_dssp EE--EEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH
T ss_pred ee--eeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCe
Confidence 88 999999999999999999721 68999999985 35
Q ss_pred cceecCCCCCCChhh-hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 019012 119 QLRKIQPDHHIPLSY-HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC 183 (347)
Q Consensus 119 ~~~~i~p~~~~~~~~-~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~ 183 (347)
++++ |++ ... +++++..++.++++++. ....+.++ +| .|++|+.++|.||.+||
T Consensus 147 -l~~i-Pd~---~~~~~~~~~~~~~~~~~~a~~-~~~~~~g~----~g-~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 147 -LLKL-PDR---DKAMEKINIAEVVGVQVISLD-DAPRGYGE----FD-AGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp -CEEC-SCH---HHHHHTCCHHHHHTEEEECGG-GHHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred -EEEC-CCC---CChHHHHHHHHHHHHHHHHHH-hCCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence 8999 987 444 57788888888888873 34444443 46 49999999999999886
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.90 E-value=1.5e-23 Score=168.80 Aligned_cols=168 Identities=18% Similarity=0.169 Sum_probs=133.2
Q ss_pred hhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeee
Q 019012 132 SYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 209 (347)
Q Consensus 132 ~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~ 209 (347)
|++ +|.+++.+.|+|+++.+.+++++|++|+|+|+ |++|+.++|+++.+|+ +|++++.+++|++.++ ++|+++++|
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in 80 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECIS 80 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEEC
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEEC
Confidence 344 88999999999999988899999999999996 9999999999999997 9999999999999999 999999999
Q ss_pred cCCHHHHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhcC-CeEEEEcccccccCCCCCCccchHHHhhcceEeecc
Q 019012 210 YNDETDLVAALKRCFPQ-GIDIYFDNVGGE-MLDAALLNMRDH-GRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGF 286 (347)
Q Consensus 210 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
+++.++..+.+.+.+.+ ++|++||++|+. .++.++..+.++ |+++.+|.+... .....+. ..+.++.+++|+
T Consensus 81 ~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~-~~~~~~~~i~Gs 155 (176)
T d1d1ta2 81 PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA----KMLTYDP-MLLFTGRTWKGC 155 (176)
T ss_dssp GGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTT----CCEEECT-HHHHTTCEEEEC
T ss_pred ccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccc----cccCCCH-HHHhCCCEEEEE
Confidence 87642335556665655 999999999974 678888877665 999999976442 1112222 345567899998
Q ss_pred ccccccchhHHHHHHHHHHHHC
Q 019012 287 LQSDYLHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~ 308 (347)
+.++... .+++.++++++.+
T Consensus 156 ~~G~~~~--~~dip~li~~~~~ 175 (176)
T d1d1ta2 156 VFGGLKS--RDDVPKLVTEFLA 175 (176)
T ss_dssp SGGGCCH--HHHHHHHHHHHTT
T ss_pred EEeCCCc--HHHHHHHHHHHhC
Confidence 8766432 5667777776543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.90 E-value=3.5e-23 Score=167.25 Aligned_cols=169 Identities=21% Similarity=0.222 Sum_probs=134.4
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
++|.+++.+.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|++++++++|.+.++ ++|+++++++++
T Consensus 5 ~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~ 82 (176)
T d2jhfa2 5 KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQD 82 (176)
T ss_dssp HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEecCC
Confidence 489999999999999988899999999999997 8999999999999987 9999999999999999 999999998754
Q ss_pred HH-HHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 213 ET-DLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 213 ~~-~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.+ .....++...++++|++||++|. ..++.++..++++|..+.++..... .........++.+++++.|+...+
T Consensus 83 ~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~ 158 (176)
T d2jhfa2 83 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGAIFGG 158 (176)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGG
T ss_pred chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEEEEeC
Confidence 21 34455555555699999999997 4678899999887555555443322 122333445667899999998765
Q ss_pred ccchhHHHHHHHHHHHHCCc
Q 019012 291 YLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~ 310 (347)
... .+++.++++++++|+
T Consensus 159 ~~~--~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 159 FKS--KDSVPKLVADFMAKK 176 (176)
T ss_dssp CCH--HHHHHHHHHHHHTTS
T ss_pred CCH--HHHHHHHHHHHHCcC
Confidence 422 667889999998875
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=5.9e-25 Score=176.59 Aligned_cols=165 Identities=19% Similarity=0.251 Sum_probs=133.0
Q ss_pred hhhhcCChhhhHHHHHH---hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeec
Q 019012 134 HIGLLGMPGFTAYAGFH---EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNY 210 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~---~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~ 210 (347)
++|+++++++|||++++ +.....++++|||+||+|++|.+++|+||.+|++|+++++++++.+.++ ++|+++++|+
T Consensus 5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~ 83 (177)
T d1o89a2 5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPR 83 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEG
T ss_pred HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccccccc
Confidence 58999999999998764 3334455679999999999999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 211 NDETDLVAALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
++. ++. +.+....+|.++|++|++.+...+++++++|+++.+|...+. ....+...++.+++++.|++...
T Consensus 84 ~~~-~~~---~~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~-----~~~~~~~~~~~k~~~i~G~~~~~ 154 (177)
T d1o89a2 84 DEF-AES---RPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----TLPTTVMPFILRNVRLQGVDSVM 154 (177)
T ss_dssp GGS-SSC---CSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----CCCCCSHHHHHHCCEEEECCSSS
T ss_pred ccH-HHH---HHHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCc-----cccccHHHHHHCCCeEEEEeccc
Confidence 764 432 222334689999999999999999999999999999987653 23456678899999999976543
Q ss_pred c-cchhHHHHHHHHHHHHC
Q 019012 291 Y-LHLYPRFLDYVISNYKQ 308 (347)
Q Consensus 291 ~-~~~~~~~~~~~~~~l~~ 308 (347)
. ++...+.++++.+.+.+
T Consensus 155 ~~~~~~~~~~~~L~~~l~~ 173 (177)
T d1o89a2 155 TPPERRAQAWQRLVADLPE 173 (177)
T ss_dssp CCHHHHHHHHHHHHHHSCH
T ss_pred CCHHHHHHHHHHHHHhccc
Confidence 3 45455666666665544
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=1e-23 Score=163.89 Aligned_cols=125 Identities=15% Similarity=0.155 Sum_probs=105.8
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||++++++ |++. .+...+++.|.+. ++||+|||.|+|||+.|...+.|.+.....+|+++|+|++| +|
T Consensus 1 MkA~v~~~~--~~~~----~l~i~~v~~p~~~---~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G--~V 69 (146)
T d1o89a1 1 LQALLLEQQ--DGKT----LASVQTLDESRLP---EGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAG--TV 69 (146)
T ss_dssp CEEEEEECC-----C----EEEEEECCGGGSC---SCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEE--EE
T ss_pred CeEEEEEcC--CCce----EEEEEEcCCCCCC---CCEEEEEEeeccCccceeeEEEeecccccccceeccccccc--cc
Confidence 899999998 7764 5566678888775 99999999999999999998988776666779999999887 89
Q ss_pred EEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHH
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGF 149 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al 149 (347)
+++|. +.+++||+|+.. |+|+||+.+++++ ++++ |++ ++++ +|+++..+.||+..+
T Consensus 70 ~~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~-vv~l-P~~---ls~~eAA~l~~a~~tA~~~~ 135 (146)
T d1o89a1 70 RTSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW-LVAM-PQG---QAAKEISLSEAPNFAEAIIN 135 (146)
T ss_dssp EEECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTT---SCCEEECGGGHHHHHHHHHT
T ss_pred eeecc--CCccceeeEEeecccceecCCCcceeeeeeeeee-EEEC-CCC---CCHHHHHHHHHHHHHHHHHH
Confidence 88765 479999999864 7999999999999 9999 999 8886 888888888887665
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=9.8e-26 Score=179.36 Aligned_cols=147 Identities=16% Similarity=0.143 Sum_probs=122.1
Q ss_pred cccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecce
Q 019012 5 VENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFG 84 (347)
Q Consensus 5 ~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g 84 (347)
+.|||+++++. |+.. .++.++++.|++. ++||||||+|+|||++|++.+.|.+.....+|.++|+|++|
T Consensus 2 ~~~ka~~~~~~--g~~~----~l~~~~v~~p~l~---~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G-- 70 (162)
T d1tt7a1 2 TLFQALQAEKN--ADDV----SVHVKTISTEDLP---KDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG-- 70 (162)
T ss_dssp CEEEEEEECCG--GGSC----CCEEEEEESSSSC---SSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEE--
T ss_pred CcEEEEEEEec--CCCe----EEEEEEcCCCCCC---CCEEEEEEEEecccchhhheeeecccccccceeeeeeeccc--
Confidence 46899999998 7664 4445668878775 99999999999999999999988775556778999999888
Q ss_pred EEEEeccCCCCCCCCCEEEEe---------cCcceeEEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcC
Q 019012 85 VSKVVDSDNPNFKPGDLVAGL---------TGWEEYSLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCS 154 (347)
Q Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~ 154 (347)
+|++ +.++++++||+|+.. |+|+||+.+++++ ++++ |++ ++++ +|+++..++|||.++.. .+
T Consensus 71 ~v~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~-l~~i-P~~---ls~~~Aa~~~~~~~ta~~~~~~-~~ 142 (162)
T d1tt7a1 71 TVVS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQN---LSLKEAMVDQLLTIVDREVSLE-ET 142 (162)
T ss_dssp EEEE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTT---CCHHHHHHSCSTTSEEEEECST-TH
T ss_pred cccc--ccccccccceeeEeeeccceeccccccceEEEecHHH-EEEC-CCC---CCHHHHHHHHHHHHHHHHHHHh-cC
Confidence 7765 566789999999875 7999999999998 9999 999 8886 88999999999988743 44
Q ss_pred CCCCCEEEEEcCCchH
Q 019012 155 PKSGEYVFVSAASGAV 170 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~ 170 (347)
...+++|||+|++|++
T Consensus 143 ~~~~~~Vli~ga~G~v 158 (162)
T d1tt7a1 143 PGALKDILQNRIQGRV 158 (162)
T ss_dssp HHHHHHTTTTCCSSEE
T ss_pred CCCCCEEEEECCcceE
Confidence 5566789999887753
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.90 E-value=6e-23 Score=165.77 Aligned_cols=168 Identities=17% Similarity=0.162 Sum_probs=134.0
Q ss_pred hhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 134 HIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
++|.+++.+.|+|+++.+.+++++|++|+|+|+ |++|+.++++++..|+ +|++++++++|++.++ ++|+++++|+++
T Consensus 5 ~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~ 82 (175)
T d1cdoa2 5 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPND 82 (175)
T ss_dssp HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGG
T ss_pred HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEcCCC
Confidence 488999999999999988899999999999996 9999999999999988 8999999999999999 999999999875
Q ss_pred HHHHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 213 ETDLVAALKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 213 ~~~~~~~i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
..+...++++.+.+ ++|++||++|+ ..+..++.+++++|.++.++..... .........+.++.++.|+..++
T Consensus 83 ~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~-----~~~~~~~~~~~~~~~i~Gs~~G~ 157 (175)
T d1cdoa2 83 HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-----HDVATRPIQLIAGRTWKGSMFGG 157 (175)
T ss_dssp CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-----SCEEECHHHHHTTCEEEECSGGG
T ss_pred cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCC-----cccCccHHHHHCCcEEEEEEEeC
Confidence 42344555555544 99999999997 4678888888887555544433321 22344556667889999988766
Q ss_pred ccchhHHHHHHHHHHHHCCc
Q 019012 291 YLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~g~ 310 (347)
+. ..+++.++++++.+|+
T Consensus 158 ~~--~~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 158 FK--GKDGVPKMVKAYLDKK 175 (175)
T ss_dssp CC--HHHHHHHHHHHHHTTS
T ss_pred Cc--HHHHHHHHHHHHHcCC
Confidence 42 2678899999998875
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.90 E-value=8.2e-23 Score=167.06 Aligned_cols=167 Identities=19% Similarity=0.147 Sum_probs=136.0
Q ss_pred hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCH
Q 019012 135 IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDE 213 (347)
Q Consensus 135 ~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~ 213 (347)
.++|++++.|||+++ +.+++++|++|||+|+ |++|++++++|+..|+ +|++++.+++|++.++ ++|+++++++.+.
T Consensus 4 ~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~ 80 (195)
T d1kola2 4 LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLDT 80 (195)
T ss_dssp HGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSSS
T ss_pred HHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCCc
Confidence 788999999999998 6699999999999996 9999999999999999 8999999999999999 9999999999887
Q ss_pred HHHHHHHHHHCCC-CccEEEeCCCh----------------hhHHHHHHhhhcCCeEEEEcccccccCCC-------CCC
Q 019012 214 TDLVAALKRCFPQ-GIDIYFDNVGG----------------EMLDAALLNMRDHGRIAVCGMVSLHSYHD-------PQG 269 (347)
Q Consensus 214 ~~~~~~i~~~~~g-~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~~ 269 (347)
++.+.+.+++++ ++|++||++|. +.++.++++++++|+++.+|.+....... ...
T Consensus 81 -~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~ 159 (195)
T d1kola2 81 -PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL 159 (195)
T ss_dssp -CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred -CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence 999999999988 99999999984 37899999999999999999755421100 011
Q ss_pred ccchHHHhhcceEeeccccccccchhHHHHHHHHHHHHCCc
Q 019012 270 IHNLFTLVTKRITMKGFLQSDYLHLYPRFLDYVISNYKQGK 310 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 310 (347)
...+..++.+++++.+... ...+.++++++++.+++
T Consensus 160 ~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k 195 (195)
T d1kola2 160 SIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR 195 (195)
T ss_dssp CCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred eeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence 2334456677777654222 12556778888887653
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=1.5e-24 Score=172.49 Aligned_cols=142 Identities=25% Similarity=0.343 Sum_probs=117.4
Q ss_pred hhhhHHHH---HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH
Q 019012 141 PGFTAYAG---FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV 217 (347)
Q Consensus 141 ~~~ta~~a---l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 217 (347)
+++|||.+ |.+.....++++|||+||+|++|.+++|+||.+|++|++++++++|.++++ ++|+++++++++ ...
T Consensus 4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~~ 80 (167)
T d1tt7a2 4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VYD 80 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HCS
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hhc
Confidence 45677654 545566778889999999999999999999999999999999999999999 999999998753 222
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHHhhcceEeecccccc
Q 019012 218 AALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTLVTKRITMKGFLQSD 290 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
+.++...++++|++||++|++.+..++++|+++|+++.+|...+. ....+...++.+++++.|+....
T Consensus 81 ~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~~~~ 148 (167)
T d1tt7a2 81 GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVY 148 (167)
T ss_dssp SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSS
T ss_pred hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEecCC
Confidence 333333334999999999999999999999999999999987653 34567788999999999976544
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.89 E-value=9.5e-24 Score=173.49 Aligned_cols=140 Identities=16% Similarity=0.263 Sum_probs=109.8
Q ss_pred cccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceec
Q 019012 3 EQVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEG 82 (347)
Q Consensus 3 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G 82 (347)
..++|||+++.++ ++| +++++ +|.|.|. ++||||||.++|||++|++.++|.+. ...|.++|||++|
T Consensus 5 ~~~k~KAavl~~~--~~~----l~i~e--v~~P~p~---~~eVlVkV~a~giC~sDl~~~~G~~~--~~~P~i~GHE~~G 71 (198)
T d2jhfa1 5 KVIKCKAAVLWEE--KKP----FSIEE--VEVAPPK---AHEVRIKMVATGICRSDDHVVSGTLV--TPLPVIAGHEAAG 71 (198)
T ss_dssp SCEEEEEEEBCST--TSC----CEEEE--EEECCCC---TTEEEEEEEEEECCHHHHHHHHTSSC--CCSSBCCCCSEEE
T ss_pred CceEEEEEEEecC--CCC----CEEEE--EECCCCC---CCEEEEEEEEEecccccceeecCCcc--cccceecccceeE
Confidence 5678999999987 554 56654 7777674 99999999999999999999998653 4569999999888
Q ss_pred ceEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCccee
Q 019012 83 FGVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEY 111 (347)
Q Consensus 83 ~g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~ 111 (347)
+|+++|++++++++||||++. |+|+||
T Consensus 72 --~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy 149 (198)
T d2jhfa1 72 --IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149 (198)
T ss_dssp --EEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSE
T ss_pred --EEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCe
Confidence 999999999999999999742 579999
Q ss_pred EEeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEc
Q 019012 112 SLIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSA 165 (347)
Q Consensus 112 ~~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~G 165 (347)
+++|+.+ ++++ |++ ++++ +++...++.+...+. ..+++|++|.|..
T Consensus 150 ~~v~~~~-~~~~-p~~---~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~ 196 (198)
T d2jhfa1 150 TVVDEIS-VAKI-DAA---FALDPLITHVLPFEKINEGF---DLLRSGESIRTIL 196 (198)
T ss_dssp EEEEGGG-EEEC-CTT---SCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred EEeCHHH-eEEC-CCC---CCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence 9999998 9999 988 5554 444444444433332 2357888887753
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.89 E-value=2.3e-25 Score=179.05 Aligned_cols=137 Identities=15% Similarity=0.118 Sum_probs=102.1
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+++.++ + ++++ .++|.|.+. ++|||||+.++|||++|++.+.+... ...+|+++|||++| +|
T Consensus 1 MKa~v~~~~--~-----~l~i--~e~p~P~~~---~~eVlIkv~a~gic~sD~~~~~~~~~-~~~~P~i~GhE~~G--~V 65 (177)
T d1jqba1 1 MKGFAMLGI--N-----KLGW--IEKERPVAG---SYDAIVRPLAVSPCTSDIHTVFEGAL-GDRKNMILGHEAVG--EV 65 (177)
T ss_dssp CEEEEEEET--T-----EEEE--EECCCCCCC---TTCEEEEEEEECCCHHHHHHHHHCTT-CCCSSEECCCCEEE--EE
T ss_pred CeEEEEEeC--C-----CeEE--EEeeCCCCC---CCEEEEEEEEEecCCCcccccccCCC-CCCCCccCcceeeE--Ee
Confidence 799999997 4 3455 557878775 99999999999999999987766442 23568999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---------------------------------cCcceeEEeec--cccceecCCCCCCCh
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------------------------------TGWEEYSLIRK--TEQLRKIQPDHHIPL 131 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~--~~~~~~i~p~~~~~~ 131 (347)
+++|+++++|++||||+.. |+|+||+++|. .+ ++++ |++ +
T Consensus 66 ~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~-l~~i-P~~---~ 140 (177)
T d1jqba1 66 VEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMN-LAIL-PKD---V 140 (177)
T ss_dssp EEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHH-CEEC-CTT---S
T ss_pred eecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCe-EEEC-CCC---c
Confidence 9999999999999999731 69999999985 35 8999 999 7
Q ss_pred hhhhhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 019012 132 SYHIGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLV 174 (347)
Q Consensus 132 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~a 174 (347)
+++.++ ....++++++ ++.+|++|+ |++|+.+
T Consensus 141 ~~~~~~--~~~~~~~~~~--------~~~vlv~g~-gp~gl~a 172 (177)
T d1jqba1 141 DLSKLV--THVYHGFDHI--------EEALLLMKD-KPKDLIK 172 (177)
T ss_dssp CGGGGE--EEEEESGGGH--------HHHHHHHHH-CCTTCSE
T ss_pred chHHHH--HHHHHHHHHh--------cCceEEECC-CHHHhhe
Confidence 764221 1122233333 234677774 7666543
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=1.1e-22 Score=163.53 Aligned_cols=128 Identities=20% Similarity=0.190 Sum_probs=102.3
Q ss_pred cceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecceEE
Q 019012 7 NKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGFGVS 86 (347)
Q Consensus 7 ~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~g~v 86 (347)
|||+....+ ++| |++ +++|.|+|. ++||||||.++|||++|++.+.|.+. ...+|+|+|||++| +|
T Consensus 1 m~a~~~~~~--~~p----l~i--~ev~~P~pg---~geVlVkv~a~gic~sDl~~~~g~~~-~~~~P~i~GhE~~G--~V 66 (179)
T d1uufa1 1 IKAVGAYSA--KQP----LEP--MDITRREPG---PNDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVG--RV 66 (179)
T ss_dssp CEEEEBSST--TSC----CEE--EECCCCCCC---TTEEEEEEEEEECCHHHHHHHHCTTS-CCCSSBCCCCCEEE--EE
T ss_pred CeEEEEccC--CCC----CEE--EEecCCCCC---CCEEEEEEEEECCCCCcceeeeeeec-cccccccccccccc--cc
Confidence 688888887 665 455 558888885 99999999999999999999988653 34669999999888 99
Q ss_pred EEeccCCCCCCCCCEEEEe---------------------------------------cCcceeEEeeccccceecCCCC
Q 019012 87 KVVDSDNPNFKPGDLVAGL---------------------------------------TGWEEYSLIRKTEQLRKIQPDH 127 (347)
Q Consensus 87 ~~vg~~v~~~~~Gd~V~~~---------------------------------------g~~~~~~~v~~~~~~~~i~p~~ 127 (347)
+++|++|+++++||+|... |+|+||+.+++++ ++++ |+.
T Consensus 67 ~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~-~~~i-p~~ 144 (179)
T d1uufa1 67 VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-RVA 144 (179)
T ss_dssp EEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-CCC
T ss_pred hhhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHH-EEEC-CCC
Confidence 9999999999999999521 6899999999998 9999 865
Q ss_pred CCChhhhhhhcCChhhhHHHHHHhhcCCC
Q 019012 128 HIPLSYHIGLLGMPGFTAYAGFHEVCSPK 156 (347)
Q Consensus 128 ~~~~~~~~a~l~~~~~ta~~al~~~~~~~ 156 (347)
.. .+.+..++.++++++. ++.++
T Consensus 145 ---~~--~~~~a~~l~~a~~a~~-~a~v~ 167 (179)
T d1uufa1 145 ---DI--EMIRADQINEAYERML-RGDVK 167 (179)
T ss_dssp ---CE--EEECGGGHHHHHHHHH-TTCSS
T ss_pred ---Cc--ChhHhchhHHHHHHHH-HhCcc
Confidence 22 2233346778898883 35553
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.88 E-value=2e-23 Score=171.10 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=107.4
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
..+|||++++++ ++| +++++ +|.|+|. ++||||||.|+|||++|++.++|.+. ...|.++|||++|
T Consensus 6 ~~~~KAav~~~~--g~~----l~i~e--v~~P~p~---~~eVlVkv~a~gICgsDlh~~~G~~~--~~~P~i~GHE~~G- 71 (198)
T d1p0fa1 6 DITCKAAVAWEP--HKP----LSLET--ITVAPPK---AHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVG- 71 (198)
T ss_dssp CEEEEEEEBSST--TSC----CEEEE--EEECCCC---TTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEE-
T ss_pred ceEEEEEEEccC--CCC----CEEEE--EECCCCC---CCEEEEEEEEEEEecccceeeeeccc--cccccccceeeee-
Confidence 358999999998 655 46654 6777674 99999999999999999999988663 4569999999888
Q ss_pred eEEEEeccCCCCCCCCCEEEEe---------------------------------------------------cCcceeE
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGL---------------------------------------------------TGWEEYS 112 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~ 112 (347)
+|+++|++++++++||||+.. |+|+||+
T Consensus 72 -~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~ 150 (198)
T d1p0fa1 72 -VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYT 150 (198)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEE
T ss_pred -eeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeE
Confidence 999999999999999999842 3689999
Q ss_pred EeeccccceecCCCCCCChhhh-hhhcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHH
Q 019012 113 LIRKTEQLRKIQPDHHIPLSYH-IGLLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQ 172 (347)
Q Consensus 113 ~v~~~~~~~~i~p~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~ 172 (347)
.+++.. ++++ |++ ++.. ++.....+.+ +.+++.|||.|+ |++|+
T Consensus 151 ~v~~~~-~~ki-p~~---~~~~~~~~~~~~~~~----------v~~~~~vlv~G~-G~iGl 195 (198)
T d1p0fa1 151 VVADIA-VAKI-DPK---INVNFLVSTKLTLDQ----------INKAFELLSSGQ-GVRSI 195 (198)
T ss_dssp EEETTS-EEEE-CTT---SCGGGGEEEEECGGG----------HHHHHHHTTTSS-CSEEE
T ss_pred EecHHH-EEEC-CCC---CCHHHHHHhhcchhh----------cCCCCEEEEECC-CcceE
Confidence 999998 9999 988 5553 3333332222 233445778785 77764
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.78 E-value=1.7e-18 Score=133.52 Aligned_cols=141 Identities=27% Similarity=0.476 Sum_probs=105.5
Q ss_pred ccccceEEEecccCCCCCCCCeEEEEeecccCCCCCCCCCcEEEEEEEeecChhcccccccCCCCCCCCCCCCCCceecc
Q 019012 4 QVENKQVIFRGYIEGAPKETDMEIKISGIQLKAPKGSDSGAFLVKNLYLSCDPYMRGRMRSSFTSSYIPPFVPGQPVEGF 83 (347)
Q Consensus 4 ~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~vlV~v~~~~i~~~D~~~~~~~~~~~~~~p~i~G~e~~G~ 83 (347)
|.++|+|++.+++.|.|.+.+|++++.++ |++. +||||||++|.++++..+..+. |.-+|....|.
T Consensus 1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~i--p~~~---~gevLvk~~~~svDp~~R~~~~---------~~~~g~~~~g~ 66 (147)
T d1v3va1 1 MVKAKSWTLKKHFQGKPTQSDFELKTVEL--PPLK---NGEVLLEALFLSVDPYMRIASK---------RLKEGAVMMGQ 66 (147)
T ss_dssp CCEEEEEEESSCCCSSCCGGGEEEEEEEC--CCCC---TTCEEEEEEEEECCTHHHHHGG---------GSCTTSBCCCC
T ss_pred CcccEEEEEccCCCCCCcccceEEEEEEC--CCCC---CCEEEEEEEEEeEccccccccc---------ccccCCccccc
Confidence 45689999999999999877788877555 5564 9999999999999987653322 22234444455
Q ss_pred eEEEEeccCCCCCCCCCEEEEecCcceeEEeeccccceecCCCCCCC---hhh-hhhhcCChhhh-HHHHHHhhcCCCCC
Q 019012 84 GVSKVVDSDNPNFKPGDLVAGLTGWEEYSLIRKTEQLRKIQPDHHIP---LSY-HIGLLGMPGFT-AYAGFHEVCSPKSG 158 (347)
Q Consensus 84 g~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~---~~~-~~a~l~~~~~t-a~~al~~~~~~~~~ 158 (347)
++.+.+.|+.++|++||+|+++++|+||++++++. +.++ |.+ .+ ++. ..+++...++| ||..+.. ..+.|
T Consensus 67 ~vg~Vv~S~~~~f~~GD~V~g~~gw~ey~v~~~~~-l~kv-~~~-~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~G 141 (147)
T d1v3va1 67 QVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTE-WPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLG 141 (147)
T ss_dssp EEEEEEEESCTTSCTTCEEEECCCSBSEEEECSSS-CEEC-CTT-CCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSS
T ss_pred eEEEEEEeCCCcccCCCEEEEccCCEeEEEeccce-eeEc-ccc-ccccccchhhhHhccccchHHHHHHhhC--CCCCC
Confidence 56666788999999999999999999999999998 9998 654 21 112 25577788888 4556644 35679
Q ss_pred CEEEE
Q 019012 159 EYVFV 163 (347)
Q Consensus 159 ~~vLI 163 (347)
++||+
T Consensus 142 etvv~ 146 (147)
T d1v3va1 142 KAVVT 146 (147)
T ss_dssp EEEEE
T ss_pred CEEEe
Confidence 99987
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=4.4e-15 Score=100.00 Aligned_cols=70 Identities=29% Similarity=0.357 Sum_probs=63.8
Q ss_pred hhhhcCChhhhHHHHHHh---hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 134 HIGLLGMPGFTAYAGFHE---VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 134 ~~a~l~~~~~ta~~al~~---~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
++++++..++|||++++. ....+++++|||+||+|++|.+++|+++.+|++|+++++++++.++++ ++|+
T Consensus 5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA 77 (77)
T d1o8ca2 5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA 77 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence 588999999999988753 356789999999999999999999999999999999999999999999 8884
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.36 E-value=3.2e-06 Score=64.47 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=78.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+..+|+|+|+ |..|+.|++.|+.+|++|.+.+.+.++++++++.++-. .....++. .+.+.+++ +|+||.++
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~-~l~~~~~~-----aDivI~aa 103 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA-EIETAVAE-----ADLLIGAV 103 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH-HHHHHHHT-----CSEEEECC
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhh-hHHHhhcc-----CcEEEEee
Confidence 4578999997 99999999999999999999999999999998444432 33333333 66666664 89999987
Q ss_pred C--h---h--hHHHHHHhhhcCCeEEEEcccccccC
Q 019012 236 G--G---E--MLDAALLNMRDHGRIAVCGMVSLHSY 264 (347)
Q Consensus 236 g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~ 264 (347)
= + + .-++.++.|+++..+|.+....+.++
T Consensus 104 lipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~ 139 (168)
T d1pjca1 104 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCV 139 (168)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSB
T ss_pred ecCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcc
Confidence 4 2 1 45788999999999999887555443
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.29 E-value=2.8e-06 Score=70.20 Aligned_cols=105 Identities=26% Similarity=0.391 Sum_probs=75.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHC--CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCF--PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~v 231 (347)
+|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++.. ..+|..++++..+.+++.. .|++|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 5889999999999999999999999999999999999888877666642 2356665534433333332 2479999
Q ss_pred EeCCChh--------------------------hHHHHHHhhh--cCCeEEEEccccc
Q 019012 232 FDNVGGE--------------------------MLDAALLNMR--DHGRIAVCGMVSL 261 (347)
Q Consensus 232 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 261 (347)
+++.|.. ..+.+++.|. ++|+++.++....
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~ 140 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG 140 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence 9988731 1133555563 3699999986544
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.19 E-value=3.8e-06 Score=69.30 Aligned_cols=80 Identities=13% Similarity=0.188 Sum_probs=62.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCC--CCccEEEe
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFP--QGIDIYFD 233 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~--g~~d~vid 233 (347)
+|+++||+||++++|++.++.+...|++|+.+++++++.+.+.+++++. ..+|-.+++++.+.+.+... |.+|++++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 5899999999999999999999999999999999999988887677763 23566665344333333221 46999999
Q ss_pred CCC
Q 019012 234 NVG 236 (347)
Q Consensus 234 ~~g 236 (347)
+.|
T Consensus 84 nAG 86 (242)
T d1ulsa_ 84 YAG 86 (242)
T ss_dssp CCC
T ss_pred CCc
Confidence 887
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=6.6e-06 Score=67.92 Aligned_cols=80 Identities=20% Similarity=0.185 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
-.|+++||+||++++|++.++.+...|++|+++++++++++.+.++++.. ..+|-.+.+...+.+.+ . |.+|++++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~-g~iDilVn 82 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS-V-GPVDLLVN 82 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT-C-CCCCEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH-h-CCceEEEe
Confidence 46899999999999999999999999999999999999888777566542 34566665233333322 2 47999999
Q ss_pred CCCh
Q 019012 234 NVGG 237 (347)
Q Consensus 234 ~~g~ 237 (347)
+.|.
T Consensus 83 nAg~ 86 (244)
T d1pr9a_ 83 NAAV 86 (244)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8873
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.10 E-value=8.8e-06 Score=67.04 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ..+|-.+++...+.+.++ |++|+++++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn 81 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence 5899999999999999999999999999999999999887776565432 345666652333333322 479999999
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 82 Ag 83 (242)
T d1cyda_ 82 AA 83 (242)
T ss_dssp CC
T ss_pred Cc
Confidence 87
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.08 E-value=1e-05 Score=64.10 Aligned_cols=79 Identities=19% Similarity=0.178 Sum_probs=59.4
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CC-CeeeecCCHHHHHHHHHHHCCCCc
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GF-DEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~-~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.--+|+++||+||+|++|..++..+...|++|++++++.++.+.+.+++ .. ...+|..+.++ +++.. +++
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~-~~i 93 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDAS----RAEAV-KGA 93 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHH----HHHHT-TTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHH----HHHHh-cCc
Confidence 3458999999999999999999999999999999999998877665333 22 23456555322 33333 359
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|++|++.|.
T Consensus 94 Dilin~Ag~ 102 (191)
T d1luaa1 94 HFVFTAGAI 102 (191)
T ss_dssp SEEEECCCT
T ss_pred CeeeecCcc
Confidence 999999874
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.06 E-value=1.1e-05 Score=62.38 Aligned_cols=105 Identities=14% Similarity=0.076 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee-ecCCHH------------------HHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYNDET------------------DLV 217 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi-~~~~~~------------------~~~ 217 (347)
+..+|+|+|| |..|+.|+..|+.+|++|.+.+.+.+++++++ +++...+- +..... ...
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~ 105 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 105 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence 4568999997 99999999999999999999999999999999 88764321 000000 011
Q ss_pred HHHHHHCCCCccEEEeCCC---hh----hHHHHHHhhhcCCeEEEEcccccccC
Q 019012 218 AALKRCFPQGIDIYFDNVG---GE----MLDAALLNMRDHGRIAVCGMVSLHSY 264 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~~ 264 (347)
+.+.+... ..|+||-++= .. .-+..++.|++|+.+|.+....+-++
T Consensus 106 ~~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~ 158 (183)
T d1l7da1 106 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 158 (183)
T ss_dssp HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCcc
Confidence 22222221 4899998774 21 45788999999999999987666544
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.06 E-value=8.2e-06 Score=67.29 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=75.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
-+|+++||+||++++|++.++.+...|++|+++++++++.+.+.++++-. ...|-.+++++.+.+++... |.+|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 36899999999999999999999999999999999999888777566542 22465555344433433322 36999
Q ss_pred EEeCCChh-----------hH---------------HHHHHhhh--cCCeEEEEccccc
Q 019012 231 YFDNVGGE-----------ML---------------DAALLNMR--DHGRIAVCGMVSL 261 (347)
Q Consensus 231 vid~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~ 261 (347)
++++.|.. .+ +.++..|. .+|+++.++....
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 142 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG 142 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccc
Confidence 99998831 11 23444453 3689999987655
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.05 E-value=7.5e-06 Score=68.11 Aligned_cols=80 Identities=14% Similarity=0.244 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.+++|... ..|-.+++++.+.+++... |.+|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 58899999999999999999999999999999999998887776887632 3466665344443333322 479999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 84 VnnAg 88 (256)
T d1k2wa_ 84 VNNAA 88 (256)
T ss_dssp EECCC
T ss_pred Eeecc
Confidence 99988
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.04 E-value=1.2e-05 Score=66.58 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
.|+++||+||++++|.+.++.+...|++|+++++++++.+.+.++++-. ...|-++.++..+.+++... |++|+++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899999999999999999999999999999999999988887555532 23465555344433333322 4699999
Q ss_pred eCCCh----h--------hH---------------HHHHHhhhc-CCeEEEEccccc
Q 019012 233 DNVGG----E--------ML---------------DAALLNMRD-HGRIAVCGMVSL 261 (347)
Q Consensus 233 d~~g~----~--------~~---------------~~~~~~l~~-~G~~v~~g~~~~ 261 (347)
++.|. . .+ +.++..|++ +|+++.++....
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~ 141 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG 141 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence 98872 1 01 334555654 689999886544
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.02 E-value=1.1e-05 Score=67.02 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
+|+++||+||++++|++.++.+...|++|+.+++++++.+.+.++++.. ..+|-.+++++.+.+++... |.+|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 5899999999999999999999999999999999999888776577642 23455554344333333221 469999
Q ss_pred EeCCChh-----------hH---------------HHHHHhhh--cCCeEEEEccccc
Q 019012 232 FDNVGGE-----------ML---------------DAALLNMR--DHGRIAVCGMVSL 261 (347)
Q Consensus 232 id~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~ 261 (347)
+++.|.. .+ +.+++.|. ++|+++.++....
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~ 141 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG 141 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh
Confidence 9988731 11 23444443 3699999987654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.01 E-value=9.8e-06 Score=68.19 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
+|+++||+||++++|+++++.+...|++|+++++++++++.+.+++|.. ...|..+.++..+.+.+... |.+|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 5899999999999999999999999999999999999888777577643 23455554333333333222 469999
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+++.|
T Consensus 84 vnnAG 88 (276)
T d1bdba_ 84 IPNAG 88 (276)
T ss_dssp ECCCC
T ss_pred ccccc
Confidence 99887
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.99 E-value=1.3e-05 Score=66.24 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=75.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCC--CCccEEE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFP--QGIDIYF 232 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~--g~~d~vi 232 (347)
-+|+++||+||++++|++.++.+...|++|+++++++++.+.++ +.+... .+|-.+.++..+.+.+... |.+|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 81 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV 81 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 46899999999999999999999999999999999988877777 777642 3566654333333333222 4699999
Q ss_pred eCCChh-----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 233 DNVGGE-----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 233 d~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
++.|.. .+ +.+++.|.+ +|+++.++....
T Consensus 82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~ 138 (248)
T d2d1ya1 82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG 138 (248)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence 988731 11 334556654 689999886554
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.98 E-value=2e-05 Score=65.52 Aligned_cols=81 Identities=17% Similarity=0.263 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCe---eeecCCHHH---HHHHHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDE---AFNYNDETD---LVAALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~---vi~~~~~~~---~~~~i~~~~~g~ 227 (347)
+|+++||+||++++|.+.++.+...|++|+.+++++++.+.+.++ .+... .+|.++.++ +.+.+.+..++.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999999876665433 34322 346665523 334455555567
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
.|+++++.|.
T Consensus 85 idilinnag~ 94 (258)
T d1ae1a_ 85 LNILVNNAGV 94 (258)
T ss_dssp CCEEEECCCC
T ss_pred cEEEeccccc
Confidence 9999998873
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.97 E-value=1.9e-05 Score=66.01 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-----eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-----EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.++++.. ..+|-.+++++...+.+... |.+|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 6899999999999999999999999999999999999888777566531 12455554344433333221 4799
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
+++++.|
T Consensus 85 ~lVnnAG 91 (268)
T d2bgka1 85 IMFGNVG 91 (268)
T ss_dssp EEEECCC
T ss_pred eeccccc
Confidence 9999887
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.93 E-value=2.5e-05 Score=64.75 Aligned_cols=105 Identities=18% Similarity=0.164 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC----C----eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF----D----EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~----~----~vi~~~~~~~~~~~i~~~~~--g 226 (347)
.|+++||+||++++|++.++.+...|++|++++++.++.+.+.+++.. . ...|-.+.+++.+.+++... |
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999999999999999999887766544421 1 12466655344444433322 4
Q ss_pred CccEEEeCCChh------------------hHHHHHHhhhc-----CCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE------------------MLDAALLNMRD-----HGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~------------------~~~~~~~~l~~-----~G~~v~~g~~~~ 261 (347)
++|+++++.|.. ....++..|.+ +|+++.++....
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~ 139 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG 139 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence 799999999841 11334455543 478999886554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.92 E-value=2e-05 Score=65.23 Aligned_cols=81 Identities=12% Similarity=0.134 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-----eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-----EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.++++.. ...|-.++++..+.+.+... |++|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 84 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence 5899999999999999999999999999999999999888777566431 12455554233333332221 4799
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
+++++.|.
T Consensus 85 iLVnnAg~ 92 (251)
T d1zk4a1 85 TLVNNAGI 92 (251)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99998873
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.92 E-value=1.6e-05 Score=65.91 Aligned_cols=105 Identities=20% Similarity=0.192 Sum_probs=75.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee---eecCCHHHHHHHHHHHCC--CCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA---FNYNDETDLVAALKRCFP--QGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v---i~~~~~~~~~~~i~~~~~--g~~d~v 231 (347)
+|+++||+||++++|++.++.+...|++|+.+++++++.+.+.++++.... .|..+.++..+.+++... |.+|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 84 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 589999999999999999999999999999999999988887767775422 344444233333333221 479999
Q ss_pred EeCCChh--------------------------hHHHHHHhhh-cCCeEEEEccccc
Q 019012 232 FDNVGGE--------------------------MLDAALLNMR-DHGRIAVCGMVSL 261 (347)
Q Consensus 232 id~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~ 261 (347)
+++.|.. ..+.++..|+ ++|+++.++....
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~ 141 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS 141 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence 9998831 1134555565 4799999987554
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.90 E-value=2.2e-05 Score=64.57 Aligned_cols=82 Identities=15% Similarity=0.158 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe---eeecCCHHHHHHHHHHHCC--CCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE---AFNYNDETDLVAALKRCFP--QGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~---vi~~~~~~~~~~~i~~~~~--g~~d~ 230 (347)
-.|+++||+||++++|.+.++-+...|++|+++++++++.+.+.++++... ..|-+++++..+.+.+... |++|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 368999999999999999999999999999999999998887776777532 2455555344444443332 46999
Q ss_pred EEeCCCh
Q 019012 231 YFDNVGG 237 (347)
Q Consensus 231 vid~~g~ 237 (347)
++++.|.
T Consensus 83 LinnAg~ 89 (241)
T d2a4ka1 83 VAHFAGV 89 (241)
T ss_dssp EEEGGGG
T ss_pred ecccccc
Confidence 9998773
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.89 E-value=2.4e-05 Score=65.66 Aligned_cols=101 Identities=21% Similarity=0.342 Sum_probs=68.3
Q ss_pred CCEE-EEEcCCchHHHHHHH-HHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHH---HHHHHHHHCCC
Q 019012 158 GEYV-FVSAASGAVGQLVGQ-LAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETD---LVAALKRCFPQ 226 (347)
Q Consensus 158 ~~~v-LI~Ga~g~~G~~ai~-la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~---~~~~i~~~~~g 226 (347)
|.+| ||+||++++|+++++ +++..|++|+++++++++.+.+.+++ +.. ..+|-.+.++ +.+++.+.. +
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence 5666 999999999998765 56667999999999999877665443 332 2346655423 334444333 3
Q ss_pred CccEEEeCCChh-----------h---------------HHHHHHhhhcCCeEEEEccc
Q 019012 227 GIDIYFDNVGGE-----------M---------------LDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 227 ~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~ 259 (347)
.+|+++++.|-. . .+.++..|++.|+++.++..
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~ 139 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI 139 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 699999998831 1 12344556778999988753
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.89 E-value=3.5e-05 Score=64.00 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHH---HHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAA---LKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~---i~~~~~g~ 227 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.+++ |.. ...|-.++++..+. +.+..++.
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999999999999999999999999999998876655343 332 23465554333333 33333447
Q ss_pred ccEEEeCCChh-----------hH---------------HHHHHhhh--cCCeEEEEccccc
Q 019012 228 IDIYFDNVGGE-----------ML---------------DAALLNMR--DHGRIAVCGMVSL 261 (347)
Q Consensus 228 ~d~vid~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~ 261 (347)
+|+++++.|.. .+ +.++..+. .+|+++.++....
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 148 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG 148 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccc
Confidence 99999998831 11 23444453 3689999887554
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.89 E-value=2e-05 Score=64.84 Aligned_cols=82 Identities=18% Similarity=0.220 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
-.|+++||+||++++|.+.+..+...|++|+++++++++++.+.++ .|.. ...|.++.++....+++.. .|.
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~ 84 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 84 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999998888888899999999999887766533 3332 2456666534444444332 246
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|+++++.|.
T Consensus 85 idilinnag~ 94 (244)
T d1yb1a_ 85 VSILVNNAGV 94 (244)
T ss_dssp CSEEEECCCC
T ss_pred CceeEeeccc
Confidence 9999999883
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.89 E-value=2.4e-05 Score=65.13 Aligned_cols=80 Identities=16% Similarity=0.303 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+|+++||+||++++|++.+..+...|++|+++++++++.+.+.+++ |.. ...|-.+++++.+.+.+... |.+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999998877665333 432 23465554344333333222 469
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 84 DilVnnaG 91 (260)
T d1zema1 84 DFLFNNAG 91 (260)
T ss_dssp CEEEECCC
T ss_pred Ceehhhhc
Confidence 99999887
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=2e-05 Score=65.00 Aligned_cols=79 Identities=16% Similarity=0.313 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+|+++||+||++++|.+.++.+...|++|+++++++++.+.+.+..+.. .+.|.... +..+.+.+.. +..|+++++.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a 82 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA 82 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence 5899999999999999999999999999999999998888777444542 34555554 4444444433 3699999988
Q ss_pred Ch
Q 019012 236 GG 237 (347)
Q Consensus 236 g~ 237 (347)
|.
T Consensus 83 g~ 84 (245)
T d2ag5a1 83 GF 84 (245)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.88 E-value=2e-05 Score=65.46 Aligned_cols=81 Identities=16% Similarity=0.266 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHH---HHHHHHCCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLV---AALKRCFPQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~---~~i~~~~~g~ 227 (347)
+|+++||+||++++|++.++.+...|++|+.+++++++.+.+.+++ +.. ..+|..++++.. +.+.+..+|.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999999999999999998877665333 221 234655542333 3333333456
Q ss_pred ccEEEeCCCh
Q 019012 228 IDIYFDNVGG 237 (347)
Q Consensus 228 ~d~vid~~g~ 237 (347)
+|+++++.|.
T Consensus 87 idilvnnAG~ 96 (259)
T d1xq1a_ 87 LDILINNLGA 96 (259)
T ss_dssp CSEEEEECCC
T ss_pred cccccccccc
Confidence 9999998873
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.85 E-value=4e-05 Score=63.30 Aligned_cols=104 Identities=17% Similarity=0.225 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH----HcCCC---eeeecCCHHHHHHHHHHHCC--CC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----KLGFD---EAFNYNDETDLVAALKRCFP--QG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~i~~~~~--g~ 227 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.+ +.|.. ...|-.+++++...+++... |.
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 48899999999999999999999999999999999887654432 44543 23466655343333333222 46
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhc--CCeEEEEcccc
Q 019012 228 IDIYFDNVGGE--------------------------MLDAALLNMRD--HGRIAVCGMVS 260 (347)
Q Consensus 228 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~ 260 (347)
+|+++++.|.. ..+.+++.|.+ +|+++.++...
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~ 144 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT 144 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence 99999998731 11345666743 58999987643
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.84 E-value=2.7e-05 Score=65.22 Aligned_cols=80 Identities=19% Similarity=0.305 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC--C----eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF--D----EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~--~----~vi~~~~~~~~~~~i~~~~~-- 225 (347)
+|+++||+||++++|++.++.+...|++|+++++++++++.+.+++ +. . ...|-.+++++...+.+...
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999999998877665333 22 1 23465555333333333322
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
|++|+++++.|
T Consensus 84 g~iDilvnnAG 94 (272)
T d1xkqa_ 84 GKIDVLVNNAG 94 (272)
T ss_dssp SCCCEEEECCC
T ss_pred CCceEEEeCCc
Confidence 46999999876
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.83 E-value=0.00027 Score=53.66 Aligned_cols=78 Identities=23% Similarity=0.295 Sum_probs=59.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
+...--.+.++||+|+ |.+|..+++.+...|+ +++++.++.++.+.+.+++|. +++++. ++.+.+.+ +|
T Consensus 17 ~~~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~---~~~~~l~~-----~D 86 (159)
T d1gpja2 17 RELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD---ELVDHLAR-----SD 86 (159)
T ss_dssp HHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG---GHHHHHHT-----CS
T ss_pred HHhCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch---hHHHHhcc-----CC
Confidence 3333457889999997 9999999999999999 799999998887666558885 345554 44555553 99
Q ss_pred EEEeCCChh
Q 019012 230 IYFDNVGGE 238 (347)
Q Consensus 230 ~vid~~g~~ 238 (347)
+||.|++.+
T Consensus 87 ivi~atss~ 95 (159)
T d1gpja2 87 VVVSATAAP 95 (159)
T ss_dssp EEEECCSSS
T ss_pred EEEEecCCC
Confidence 999999863
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=3.1e-05 Score=64.30 Aligned_cols=81 Identities=25% Similarity=0.440 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CC-Ce----eeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GF-DE----AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~-~~----vi~~~~~~~~~~~i~~~~~--g 226 (347)
+|+++||+||++++|.+.+..+...|++|+.+++++++.+.+.+++ +. .. ..|-.++++..+.+.+... |
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999998877754333 32 12 2355555344333333222 4
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
++|+++++.|.
T Consensus 89 ~iD~lVnnAg~ 99 (257)
T d1xg5a_ 89 GVDICINNAGL 99 (257)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEecccc
Confidence 69999999874
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.81 E-value=3.9e-05 Score=63.63 Aligned_cols=80 Identities=18% Similarity=0.247 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.+++ +.. ...|-.+++++...+.+... |
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999999998776654332 221 12466655344433333322 4
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++++.|
T Consensus 83 ~iDiLVnnAG 92 (258)
T d1iy8a_ 83 RIDGFFNNAG 92 (258)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 6999999887
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.80 E-value=1e-05 Score=66.43 Aligned_cols=99 Identities=14% Similarity=0.178 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeee--ecCCH---HHHHHHHHHHCCC-CccE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF--NYNDE---TDLVAALKRCFPQ-GIDI 230 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi--~~~~~---~~~~~~i~~~~~g-~~d~ 230 (347)
+|++|||+||++++|++.++.+...|++|+.+++++.+.. .....+ +.... +.+...+.+..+. .+|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 4789999999999999999999999999999987655311 111111 11111 1233344444443 7999
Q ss_pred EEeCCCh----h--------hH---------------HHHHHhhhcCCeEEEEccccc
Q 019012 231 YFDNVGG----E--------ML---------------DAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 231 vid~~g~----~--------~~---------------~~~~~~l~~~G~~v~~g~~~~ 261 (347)
++++.|. . .+ +.+++.|+++|+++.++....
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~ 132 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA 132 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence 9998872 1 11 224556788999999987554
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=2.5e-05 Score=64.79 Aligned_cols=81 Identities=21% Similarity=0.317 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC--CCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP--QGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~ 228 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.+ +.|.. ...|-.+++++.+.+.+... |.+
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999887766543 33432 23455554333333333221 469
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++++.|.
T Consensus 90 DilvnnAG~ 98 (255)
T d1fmca_ 90 DILVNNAGG 98 (255)
T ss_dssp CEEEECCCC
T ss_pred CEeeeCCcC
Confidence 999999873
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.78 E-value=3.1e-05 Score=64.53 Aligned_cols=80 Identities=14% Similarity=0.262 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC------eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD------EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~------~vi~~~~~~~~~~~i~~~~~-- 225 (347)
+|+.+||+||++++|++.++.+...|++|+++++++++.+.+.++ .+.. ...|..++++..+.+.+...
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 588999999999999999999999999999999999887766533 2321 13466555344433433322
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
|++|+++++.|
T Consensus 84 g~iDilvnnAG 94 (264)
T d1spxa_ 84 GKLDILVNNAG 94 (264)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEeecccc
Confidence 47999999887
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.77 E-value=0.0001 Score=61.55 Aligned_cols=105 Identities=21% Similarity=0.299 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH---HcCCCe---eeecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN---KLGFDE---AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~--g 226 (347)
-+|+++||+||++++|.+.++.+...|++|++++++. +..+.+.+ +.|... ..|..+++++.+.+++... |
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 95 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 95 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4589999999999999999999999999999998764 33333221 445432 2455554344444444322 4
Q ss_pred CccEEEeCCChh--------------------------hHHHHHHhhhcCCeEEEEcccc
Q 019012 227 GIDIYFDNVGGE--------------------------MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 227 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
++|+++.+.|.. ..+.++..|.++|+.+.++...
T Consensus 96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~ 155 (272)
T d1g0oa_ 96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT 155 (272)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence 689999988731 1144566778889888887544
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.77 E-value=3.8e-05 Score=65.10 Aligned_cols=83 Identities=17% Similarity=0.233 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc--------CCC---eeeecCCHHHHHHHHHHH
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL--------GFD---EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~--------g~~---~vi~~~~~~~~~~~i~~~ 223 (347)
.-+|+++||+||++++|++.++.+...|++|++++++.++.+.+.+++ +.. ...|..+++++.+.+++.
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 457899999999999999999999999999999999988776554333 221 124555543444444333
Q ss_pred CC--CCccEEEeCCCh
Q 019012 224 FP--QGIDIYFDNVGG 237 (347)
Q Consensus 224 ~~--g~~d~vid~~g~ 237 (347)
.. |.+|+++++.|.
T Consensus 89 ~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 89 LDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCeEEEEeeccc
Confidence 22 369999998873
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.75 E-value=0.00023 Score=59.03 Aligned_cols=100 Identities=20% Similarity=0.302 Sum_probs=71.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
...++++|++||=.|+ +.|..++.+|+..| .+|+.++.+++..+.+++ ++|....+..... + +....+
T Consensus 97 ~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d----~~~~~~ 169 (266)
T d1o54a_ 97 MMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-D----ISEGFD 169 (266)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-C----GGGCCS
T ss_pred HhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-c----cccccc
Confidence 6689999999999994 45888889999875 599999999998887763 3454222221111 2 112222
Q ss_pred C-CccEEEeCCCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 226 Q-GIDIYFDNVGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
. .+|.|+--... ..++.+.++|++||+++++.
T Consensus 170 ~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~ 204 (266)
T d1o54a_ 170 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC 204 (266)
T ss_dssp CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence 3 68887765554 47899999999999999764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.75 E-value=3.5e-05 Score=64.61 Aligned_cols=80 Identities=18% Similarity=0.323 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCC--C----eeeecCCHHHHHHHHHHHCC--
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGF--D----EAFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~--~----~vi~~~~~~~~~~~i~~~~~-- 225 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.++ .|. . ...|-.+++++.+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999887765533 332 1 23465555333333333322
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
|.+|+++++.|
T Consensus 83 G~iDilVnnAG 93 (274)
T d1xhla_ 83 GKIDILVNNAG 93 (274)
T ss_dssp SCCCEEEECCC
T ss_pred CCceEEEeecc
Confidence 46999999877
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=97.72 E-value=4.3e-05 Score=63.48 Aligned_cols=80 Identities=11% Similarity=0.128 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH----HcCCC---eeeecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----KLGFD---EAFNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~i~~~~--~g~ 227 (347)
+|+++||+||++++|++.++.+...|++|+++++++++.+.+.+ +.|.. ...|-.++++..+.+++.. .|.
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999999999999998876654432 34543 2346665534433333322 247
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 88 iDilVnnAg 96 (260)
T d1h5qa_ 88 ISGLIANAG 96 (260)
T ss_dssp EEEEEECCC
T ss_pred CcEeccccc
Confidence 999999887
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.72 E-value=4.8e-05 Score=63.07 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=57.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
|+.+||+||++++|++.+..+...|++|+++++++++.+.+.++ .|.. ...|-.+++++...+++.. .|.+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 67789999999999999999999999999999998877665433 3432 2346555534433333322 24799
Q ss_pred EEEeCCCh
Q 019012 230 IYFDNVGG 237 (347)
Q Consensus 230 ~vid~~g~ 237 (347)
+++++.|.
T Consensus 82 ilVnnAG~ 89 (257)
T d2rhca1 82 VLVNNAGR 89 (257)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99999873
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.71 E-value=4.7e-05 Score=62.88 Aligned_cols=81 Identities=14% Similarity=0.318 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
.++.+||+||++++|++.+..+...|++|+++++++++.+.+.++ .|.. ...|-++++++.+.+.+.. .|.+
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999998889999999999999877665533 3432 2346665534433333322 2479
Q ss_pred cEEEeCCCh
Q 019012 229 DIYFDNVGG 237 (347)
Q Consensus 229 d~vid~~g~ 237 (347)
|+++++.|.
T Consensus 89 Dilvnnag~ 97 (251)
T d2c07a1 89 DILVNNAGI 97 (251)
T ss_dssp CEEEECCCC
T ss_pred eeeeecccc
Confidence 999998873
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.70 E-value=5.8e-05 Score=62.27 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=57.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCC---eeeecCCHHH---HHHHHHHHCCC-Cc
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETD---LVAALKRCFPQ-GI 228 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~---~~~~i~~~~~g-~~ 228 (347)
.++|||+||++++|++.++.+...|+ +|+.++++.++.+.+++..+.. ..+|..+.++ +.+.+.+..+. +.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 47999999999999998888877886 7999999999888887333332 2345555423 34444444443 69
Q ss_pred cEEEeCCC
Q 019012 229 DIYFDNVG 236 (347)
Q Consensus 229 d~vid~~g 236 (347)
|+++++.|
T Consensus 83 dilinnAG 90 (250)
T d1yo6a1 83 SLLINNAG 90 (250)
T ss_dssp CEEEECCC
T ss_pred EEEEEcCc
Confidence 99999988
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.65 E-value=6.6e-05 Score=63.49 Aligned_cols=82 Identities=13% Similarity=0.197 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH----HcCCC-e--eeecCCHHHHHHHHHHHC--CC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----KLGFD-E--AFNYNDETDLVAALKRCF--PQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~----~~g~~-~--vi~~~~~~~~~~~i~~~~--~g 226 (347)
-+|+++||+||++++|.+++..+...|++|+.+++++++.+.+.+ +.|.. . ..|..+.++....+.... .+
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 102 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 102 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence 358999999999999999999999999999999999887654432 33432 1 245555423333332221 24
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
++|+++++.|.
T Consensus 103 ~iDilvnnAg~ 113 (294)
T d1w6ua_ 103 HPNIVINNAAG 113 (294)
T ss_dssp SCSEEEECCCC
T ss_pred ccchhhhhhhh
Confidence 79999999873
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.62 E-value=0.0001 Score=61.19 Aligned_cols=80 Identities=19% Similarity=0.274 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH-hHHH----HHHHcCCC---eeeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ-KVDL----LKNKLGFD---EAFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~-~~~~----~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g 226 (347)
+|+++||+||++++|++.++.+...|++|++++++.+ +.+. ++ +.|.. ...|-.++++..+.+++... |
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 84 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK-KVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999899999999998754 3333 33 45542 23455555333333333221 4
Q ss_pred CccEEEeCCCh
Q 019012 227 GIDIYFDNVGG 237 (347)
Q Consensus 227 ~~d~vid~~g~ 237 (347)
++|+++++.|.
T Consensus 85 ~iDiLVnnAG~ 95 (261)
T d1geea_ 85 KLDVMINNAGL 95 (261)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEeecccee
Confidence 69999999873
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.61 E-value=0.00015 Score=59.63 Aligned_cols=104 Identities=15% Similarity=0.201 Sum_probs=70.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-H-HHHHHHcCCC---eeeecCCHHHHHHHHHHHCC--CCcc
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-V-DLLKNKLGFD---EAFNYNDETDLVAALKRCFP--QGID 229 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~-~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~--g~~d 229 (347)
+|+++||+||++++|++.++.+...|++|+++++++++ . +.++ +.|.. ...|-++++++...+++... |++|
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 82 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 82 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH-HcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 58899999999999999999999999999999987542 2 3334 66653 23465655344433333322 4799
Q ss_pred EEEeCCChh-----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 230 IYFDNVGGE-----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 230 ~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
+++++.|.. .+ +.+++.|.+ +|+++.++....
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 142 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY 142 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence 999998831 11 234555543 589999886554
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.58 E-value=0.00017 Score=55.40 Aligned_cols=72 Identities=19% Similarity=0.154 Sum_probs=56.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
+..++.++++|||+|+ |+.+.+++..++..|+ +|+++.++.++.+.+.+.++... ++... ...+|
T Consensus 10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~------------~~~~D 75 (167)
T d1npya1 10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE------------NQQAD 75 (167)
T ss_dssp HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT------------TCCCS
T ss_pred HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc------------ccchh
Confidence 4456667899999996 9999999999999998 89999999998888775676543 22211 12589
Q ss_pred EEEeCCC
Q 019012 230 IYFDNVG 236 (347)
Q Consensus 230 ~vid~~g 236 (347)
++++|+.
T Consensus 76 liINaTp 82 (167)
T d1npya1 76 ILVNVTS 82 (167)
T ss_dssp EEEECSS
T ss_pred hheeccc
Confidence 9999986
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.57 E-value=0.00013 Score=60.39 Aligned_cols=106 Identities=24% Similarity=0.377 Sum_probs=69.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH---HcCCCe---eeecCCHHHHHHHHHHHCC--
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN---KLGFDE---AFNYNDETDLVAALKRCFP-- 225 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~~-- 225 (347)
.-.|+++||+||++++|.+.++.+...|++|++++++. +..+.+.+ +.|... ..|..++++....+++...
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999999999876554 33343322 456532 2455554233333333222
Q ss_pred CCccEEEeCCChh--------------------------hHHHHHHhhhcCCeEEEEcccc
Q 019012 226 QGIDIYFDNVGGE--------------------------MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 226 g~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
|+.|+++++.|.. ..+.++..|+++|.++.+....
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~ 143 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA 143 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence 3699999988831 1144566777888877776543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.55 E-value=0.00011 Score=60.71 Aligned_cols=78 Identities=17% Similarity=0.249 Sum_probs=55.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC---eeeecCCHHHHHHHHHHHC--CCCccE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD---EAFNYNDETDLVAALKRCF--PQGIDI 230 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~vi~~~~~~~~~~~i~~~~--~g~~d~ 230 (347)
+.+||+||++++|++.+..+...|++|+++++++++.+.+.++ .|.. ...|-.++++..+.+.+.. .|++|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 3569999999999999988888999999999999887665433 3432 2346665533333333322 247999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
++++.|
T Consensus 82 lVnnAG 87 (255)
T d1gega_ 82 IVNNAG 87 (255)
T ss_dssp EEECCC
T ss_pred EEeccc
Confidence 999887
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.53 E-value=6.3e-05 Score=60.30 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=75.8
Q ss_pred hcCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCH
Q 019012 137 LLGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDE 213 (347)
Q Consensus 137 ~l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~ 213 (347)
++..+...|. .+ +..++++|++||..| ++.|..++.+++..|.+|++++.+++-.+.+++ ++|.+.+.-...
T Consensus 60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g- 134 (215)
T d1jg1a_ 60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG- 134 (215)
T ss_dssp EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence 4444555553 23 667899999999999 678888999999889889999998875555442 467654432222
Q ss_pred HHHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhcCCeEEEE
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGGE-MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 256 (347)
+...-+. ..+.||.++-+.+-+ .-...++.|++||+++..
T Consensus 135 -d~~~g~~--~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 135 -DGSKGFP--PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp -CGGGCCG--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred -ccccCCc--ccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence 1110010 013699998776643 456788999999999874
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.52 E-value=0.00024 Score=57.75 Aligned_cols=72 Identities=24% Similarity=0.313 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
+|+++||+||++++|.+.++.+...|++|+++++++++.+ +.+... ..|.++ .....+++ . +.+|+++++.
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~~~~~~-~-g~iD~lVnnA 74 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLDLLFEK-V-KEVDILVLNA 74 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHHHHHHH-S-CCCSEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHHHHHHH-h-CCCcEEEecc
Confidence 5789999999999999999999999999999999876544 444432 344443 23223333 2 4699999988
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
|
T Consensus 75 G 75 (234)
T d1o5ia_ 75 G 75 (234)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.51 E-value=0.00015 Score=60.13 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=69.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh-HhHHHHHH----HcCCCe---eeecCCHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS-QKVDLLKN----KLGFDE---AFNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~-~~~~~~~~----~~g~~~---vi~~~~~~~~~~~i~~~~~--g 226 (347)
+|+++||+||++++|++.++.+...|++|+++++++ ++.+.+.+ ..|... ..|-.+++++.+.+.+... |
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999864 44444331 334422 2455554333333333222 4
Q ss_pred CccEEEeCCChh-----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE-----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
++|+++++.|.. .+ +.+++.|.+ +|+++.+.....
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 145 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG 145 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence 699999998831 11 334555554 589999887655
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.51 E-value=3.6e-05 Score=62.93 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=62.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCC--H---HHHHHHHHHH-CCCCccEE
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYND--E---TDLVAALKRC-FPQGIDIY 231 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~--~---~~~~~~i~~~-~~g~~d~v 231 (347)
+.+|||+||++++|.+.++.+...|++|+.+++++++... . ...+.... . +...+.+... ..+.+|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---S---NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---E---EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc---c---cceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 4579999999999999999999999999999987653111 0 01111111 0 1122233332 34579999
Q ss_pred EeCCCh----h--------hH---------------HHHHHhhhcCCeEEEEccccc
Q 019012 232 FDNVGG----E--------ML---------------DAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 232 id~~g~----~--------~~---------------~~~~~~l~~~G~~v~~g~~~~ 261 (347)
+++.|. . .+ +..+..|+++|+++.++....
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~ 132 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA 132 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh
Confidence 998872 1 11 234556778899999886544
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.00032 Score=53.98 Aligned_cols=79 Identities=11% Similarity=0.166 Sum_probs=55.9
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHH
Q 019012 147 AGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 147 ~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~ 223 (347)
++|.+..-..+|++|||+|+ |+.+.+++..+..+|++|+++.|+.++.+.+.+.+... ..++..+ .
T Consensus 7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~----------~ 75 (170)
T d1nyta1 7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----------L 75 (170)
T ss_dssp HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----------G
T ss_pred HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc----------c
Confidence 34434333467899999996 99999999999999999999999998877776444321 1222211 1
Q ss_pred CCCCccEEEeCCC
Q 019012 224 FPQGIDIYFDNVG 236 (347)
Q Consensus 224 ~~g~~d~vid~~g 236 (347)
....+|++++|+.
T Consensus 76 ~~~~~dliIN~Tp 88 (170)
T d1nyta1 76 EGHEFDLIINATS 88 (170)
T ss_dssp TTCCCSEEEECCS
T ss_pred cccccceeecccc
Confidence 1136899999986
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.44 E-value=0.00053 Score=56.04 Aligned_cols=101 Identities=24% Similarity=0.261 Sum_probs=66.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEC-ChHhHHHHHH---HcCCC---eeeecCCHHHHHH---HHHHHCCCCcc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAG-SSQKVDLLKN---KLGFD---EAFNYNDETDLVA---ALKRCFPQGID 229 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~-~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~---~i~~~~~g~~d 229 (347)
.+||+||++++|++.++.+...|++|++++. ++++.+.+.+ +.|.. ...|..++++..+ .+.+.. |.+|
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 81 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTID 81 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCCS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999988764 5555544432 34542 2346555423333 333333 4799
Q ss_pred EEEeCCChh--------------------------hHHHHHHhh--hcCCeEEEEccccc
Q 019012 230 IYFDNVGGE--------------------------MLDAALLNM--RDHGRIAVCGMVSL 261 (347)
Q Consensus 230 ~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 261 (347)
+++++.|.. ..+.++..| +++|++|.++....
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~ 141 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG 141 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence 999988731 113355556 34799999986543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.43 E-value=4.2e-05 Score=62.62 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCC--CCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFP--QGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~--g~~d~vid~ 234 (347)
.|+++||+||++++|++.++.+...|++|+++++++++.+.+. ...+|..+++++.+.+.+... |.+|+++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 6899999999999999999999999999999999876533221 123555554233333333222 369999998
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.|
T Consensus 81 AG 82 (237)
T d1uzma1 81 AG 82 (237)
T ss_dssp CS
T ss_pred ec
Confidence 87
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.40 E-value=0.00021 Score=59.53 Aligned_cols=105 Identities=23% Similarity=0.193 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH----cCCCe---eeecCCHHHHH---HHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK----LGFDE---AFNYNDETDLV---AALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~----~g~~~---vi~~~~~~~~~---~~i~~~~~ 225 (347)
-+|+++||+||++++|++.+..+...|++|+.+++++++++.+.++ .+... ..|........ ..+.+..
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~- 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM- 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence 4689999999999999999999999999999999999988776533 23211 12333331222 2222222
Q ss_pred CCccEEEeCCChh-----------hH---------------HHHHHhhh-cCCeEEEEccccc
Q 019012 226 QGIDIYFDNVGGE-----------ML---------------DAALLNMR-DHGRIAVCGMVSL 261 (347)
Q Consensus 226 g~~d~vid~~g~~-----------~~---------------~~~~~~l~-~~G~~v~~g~~~~ 261 (347)
+..|+++.+.|.. .+ +.++..|+ .+|+++.++...+
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~ 153 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 153 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence 3688888876631 11 22344454 4789998886554
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.37 E-value=0.00026 Score=57.93 Aligned_cols=99 Identities=7% Similarity=0.058 Sum_probs=69.0
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHHc---C-CCeeeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNKL---G-FDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~~---g-~~~vi~~~~~~~~~~~i~~~~ 224 (347)
...+++||++||=.|+ +.|..++.+|+..| .+|++++.+++..+.+++.+ + ...+--... ++ .+..
T Consensus 79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~--Di----~~~~ 150 (250)
T d1yb2a1 79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS--DI----ADFI 150 (250)
T ss_dssp --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS--CT----TTCC
T ss_pred HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe--ee----eccc
Confidence 4588999999999994 45778888898865 48999999999888887432 2 222211111 22 2222
Q ss_pred CC-CccEEEeCCCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQ-GIDIYFDNVGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
.+ .||.||--... ..+..+.+.|++||+++++.
T Consensus 151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~ 186 (250)
T d1yb2a1 151 SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL 186 (250)
T ss_dssp CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence 23 79988754443 47899999999999999864
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.37 E-value=0.00016 Score=59.59 Aligned_cols=105 Identities=17% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC----eeeecC-CHHHHHHHHHHHCC--C
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD----EAFNYN-DETDLVAALKRCFP--Q 226 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~----~vi~~~-~~~~~~~~i~~~~~--g 226 (347)
+|++|||+||++++|++++..+...|++|++++++.++.+.+.+ ..+-. ...|.. +.+++.+.+.+... |
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999999999888776655444431 22221 223443 22123333332222 4
Q ss_pred CccEEEeCCCh---hhH---------------HHHHHhhhc-----CCeEEEEccccc
Q 019012 227 GIDIYFDNVGG---EML---------------DAALLNMRD-----HGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~---~~~---------------~~~~~~l~~-----~G~~v~~g~~~~ 261 (347)
.+|++++++|. +.+ +.+++.|.+ +|+++.++....
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~ 141 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG 141 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence 79999999984 112 334444532 588988876554
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.36 E-value=0.00024 Score=56.93 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=68.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG--CYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G--~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~ 225 (347)
+..++++|++||-+|+ +.|..++.+|+..| .+|++++.+++..+.+++. .+...+.-... +..+.+. ..
T Consensus 69 ~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d~~~~~~--~~ 142 (213)
T d1dl5a1 69 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--DGYYGVP--EF 142 (213)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGGGCCG--GG
T ss_pred HhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--chHHccc--cc
Confidence 6678999999999994 45888889998876 4899999999887777633 34432221111 1000000 11
Q ss_pred CCccEEEeCCChh-hHHHHHHhhhcCCeEEEE
Q 019012 226 QGIDIYFDNVGGE-MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 226 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 256 (347)
+.||+++.+.+-. ..+..++.|+++|+++..
T Consensus 143 ~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 174 (213)
T ss_dssp CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred cchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence 3699999877643 457788999999999874
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.36 E-value=0.00031 Score=59.44 Aligned_cols=105 Identities=24% Similarity=0.256 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh---------HhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS---------QKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~---------~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
+|+++||+||++++|++.++.+...|++|++++++. ++.+.+.++ .+.....|..+.++..+.+++..
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 589999999999999999999999999999986542 333332212 33334455554323333333221
Q ss_pred --CCCccEEEeCCChh--------------------------hHHHHHHhhh--cCCeEEEEccccc
Q 019012 225 --PQGIDIYFDNVGGE--------------------------MLDAALLNMR--DHGRIAVCGMVSL 261 (347)
Q Consensus 225 --~g~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~ 261 (347)
.|++|+++++.|.. ..+.++..|+ .+|++|.++....
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~ 152 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG 152 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence 24799999998831 1133555564 3589999986544
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.32 E-value=0.00018 Score=57.94 Aligned_cols=108 Identities=9% Similarity=0.081 Sum_probs=71.7
Q ss_pred cCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-C--eeeecCCHH
Q 019012 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-D--EAFNYNDET 214 (347)
Q Consensus 138 l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~--~vi~~~~~~ 214 (347)
...+...|. .+ +...+++|++||-.| ++.|..++.+++. +.+|++++.+++..+.+++.+.. . .++..+..
T Consensus 53 ~~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~- 126 (224)
T d1vbfa_ 53 TTALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGT- 126 (224)
T ss_dssp ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGG-
T ss_pred eehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchh-
Confidence 344444454 33 667899999999999 4578888888876 57999999999988888733332 1 22222111
Q ss_pred HHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEE
Q 019012 215 DLVAALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 256 (347)
. -+.+ .+.||.++-+.+- ...+..++.|++||++|..
T Consensus 127 ~---g~~~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 127 L---GYEE--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp G---CCGG--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred h---cchh--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence 0 0111 1369988866554 3456778999999999885
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.31 E-value=0.0017 Score=47.35 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=56.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeee--cCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFN--YNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~--~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|+|.|+ |.+|+..++.+...|..|++++.++++.+.++++++.. ++. ..++ + .+++..-..+|.++-++..
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~-~---~l~~~~i~~a~~vv~~t~~ 75 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKI-K---TLEDAGIEDADMYIAVTGK 75 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSH-H---HHHHTTTTTCSEEEECCSC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccch-h---hhhhcChhhhhhhcccCCc
Confidence 6899996 99999999999999999999999999999887566653 443 3333 2 3444333478999998887
Q ss_pred h
Q 019012 238 E 238 (347)
Q Consensus 238 ~ 238 (347)
+
T Consensus 76 d 76 (132)
T d1lssa_ 76 E 76 (132)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.31 E-value=0.00083 Score=55.28 Aligned_cols=82 Identities=20% Similarity=0.219 Sum_probs=56.4
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHh-------HHHHHHHcCCC---eeeecCCHHHHHHHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQK-------VDLLKNKLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~-------~~~~~~~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
.++|+.++||+||++++|++.+..+-..|+ +|+.+.+++.+ .+.++ ..|.. ..+|..+.++....+.+
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence 578999999999999999999888888899 68888776321 22333 45652 23466665344444444
Q ss_pred HCCC-CccEEEeCCC
Q 019012 223 CFPQ-GIDIYFDNVG 236 (347)
Q Consensus 223 ~~~g-~~d~vid~~g 236 (347)
+... ..|.++.+.|
T Consensus 84 i~~~~~i~~vv~~ag 98 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAA 98 (259)
T ss_dssp SCTTSCEEEEEECCC
T ss_pred ccccccccccccccc
Confidence 3333 6899999887
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00019 Score=57.04 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=64.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.++|+|+||+|.+|..++..+...|.+|++++++.++..... ..++..+ .|..+.+++.+.++ ++|+||.++|
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~~~l~~al~-----~~d~vi~~~g 76 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLG 76 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHT-----TCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccchhhHHHHhc-----CCCEEEEEec
Confidence 468999999999999999988888999999999988755443 3444322 34544323322222 4899999987
Q ss_pred hh-----------hHHHHHHhhhcCC--eEEEEcc
Q 019012 237 GE-----------MLDAALLNMRDHG--RIAVCGM 258 (347)
Q Consensus 237 ~~-----------~~~~~~~~l~~~G--~~v~~g~ 258 (347)
.. .....++.++..| +++.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 41 2234566666544 7777754
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00051 Score=56.22 Aligned_cols=49 Identities=14% Similarity=0.098 Sum_probs=43.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
-+|+.+||+||++++|.+.++.+...|++|+.+++++++.+.+.++++.
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~ 51 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN 51 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Confidence 4689999999999999999999999999999999999888777657765
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.27 E-value=0.00034 Score=57.69 Aligned_cols=80 Identities=18% Similarity=0.155 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCee--eecCCHHHHHHHHHHHC--CCC
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEA--FNYNDETDLVAALKRCF--PQG 227 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~v--i~~~~~~~~~~~i~~~~--~g~ 227 (347)
+|+++||+||+| ++|++.++.+...|++|+++.++++..+.+++ ..+.... .|..+++++...+.+.. .|+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 589999999977 79999999998999999999988765444431 2333222 35555423333333221 146
Q ss_pred ccEEEeCCC
Q 019012 228 IDIYFDNVG 236 (347)
Q Consensus 228 ~d~vid~~g 236 (347)
+|+++++.|
T Consensus 87 iDilVnnag 95 (256)
T d1ulua_ 87 LDYLVHAIA 95 (256)
T ss_dssp EEEEEECCC
T ss_pred ceEEEeccc
Confidence 999999886
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.0011 Score=49.91 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=75.1
Q ss_pred hHHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHH
Q 019012 144 TAYAGFHEVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 144 ta~~al~~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
+.+.++.+..+ .-.|++++|.| .|-+|...++.++.+|++|++++.++-+.-++. --|. .+. .+.+.+
T Consensus 9 S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~-~v~------~~~~a~-- 77 (163)
T d1li4a1 9 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGY-EVT------TMDEAC-- 77 (163)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTC-EEC------CHHHHT--
T ss_pred hHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCce-Eee------ehhhhh--
Confidence 34555544433 46899999999 699999999999999999999999887644443 3344 232 112222
Q ss_pred HCCCCccEEEeCCChh--hHHHHHHhhhcCCeEEEEcccc
Q 019012 223 CFPQGIDIYFDNVGGE--MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 223 ~~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
...|+++-++|.. .-.+.++.|+++-.++.+|...
T Consensus 78 ---~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd 114 (163)
T d1li4a1 78 ---QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD 114 (163)
T ss_dssp ---TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSST
T ss_pred ---hhccEEEecCCCccchhHHHHHhccCCeEEEEecccc
Confidence 2479999999974 4568889999999999888643
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00066 Score=57.69 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=66.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcC--------------CCeeeecCCHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLG--------------FDEAFNYNDET 214 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g--------------~~~vi~~~~~~ 214 (347)
...+++||++||=.| .+.|..++.+|+..|. +|+.++.+++..+.+++.+. .+.+ +....
T Consensus 92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv-~~~~~- 167 (324)
T d2b25a1 92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV-DFIHK- 167 (324)
T ss_dssp HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE-EEEES-
T ss_pred HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccce-eEEec-
Confidence 567899999999998 4568899999999875 89999999998887763221 0111 11000
Q ss_pred HHHHHHHHHCCCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 215 DLVAALKRCFPQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 215 ~~~~~i~~~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
++......+..+.||.||=-... ..+..+.++|++||+++++.
T Consensus 168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence 11101111112358877633333 47899999999999999874
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=97.23 E-value=0.00021 Score=58.49 Aligned_cols=105 Identities=18% Similarity=0.183 Sum_probs=71.5
Q ss_pred HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHH
Q 019012 146 YAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 146 ~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~ 222 (347)
+..|....++++|++||=+|+ +.|..+..+++..|++|+.++.|+...+.+++ ..|...-++.... ++ .+
T Consensus 22 ~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~----~~ 94 (245)
T d1nkva_ 22 YATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DA----AG 94 (245)
T ss_dssp HHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CC----TT
T ss_pred HHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HH----hh
Confidence 445667789999999999994 45667788888889999999999987776662 2354321111111 11 11
Q ss_pred HC-CCCccEEEeCCC-------hhhHHHHHHhhhcCCeEEEEc
Q 019012 223 CF-PQGIDIYFDNVG-------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 223 ~~-~g~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g 257 (347)
+. ++.||+|+-.-. ...+++..+.|+|+|+++...
T Consensus 95 ~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~ 137 (245)
T d1nkva_ 95 YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 137 (245)
T ss_dssp CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence 22 237999875322 136788888999999998754
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.21 E-value=0.00083 Score=56.25 Aligned_cols=103 Identities=11% Similarity=0.022 Sum_probs=70.3
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHH
Q 019012 147 AGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 147 ~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.-+.+..++++|++||=+|+ +.|-.++.+|+..|++|+.++.|+++.+++++ ..|....+..... ++ ..
T Consensus 51 ~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~~ 122 (291)
T d1kpia_ 51 KLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----EE 122 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----GG
T ss_pred HHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----cc
Confidence 33446789999999999994 55667888999999999999999998766552 3455322221111 11 12
Q ss_pred CCCCccEEEeCC-----Ch-----------hhHHHHHHhhhcCCeEEEEc
Q 019012 224 FPQGIDIYFDNV-----GG-----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 224 ~~g~~d~vid~~-----g~-----------~~~~~~~~~l~~~G~~v~~g 257 (347)
..+.||.|+.-- +. ..++.+.+.|+|+|+++.-.
T Consensus 123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 235799886422 21 25778899999999998644
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.19 E-value=0.00027 Score=58.21 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=54.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcC----CCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG----FDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
++||+||++++|++.+..+...|++|++++++.++.+.++ ..+ ...+.+..+.+.+.+.+.+.. |.+|+++++.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence 7899999999999999988899999999999888777765 432 223444443334444444433 4699999876
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
|
T Consensus 80 g 80 (252)
T d1zmta1 80 I 80 (252)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.19 E-value=0.00029 Score=57.80 Aligned_cols=78 Identities=14% Similarity=0.235 Sum_probs=52.5
Q ss_pred CEEEEEcCCchHHHHHHHHHH---HCCCEEEEEECChHhHHHHHH--HcCCC---eeeecCCHH---HHHHHHHHHCC-C
Q 019012 159 EYVFVSAASGAVGQLVGQLAK---LHGCYVVGSAGSSQKVDLLKN--KLGFD---EAFNYNDET---DLVAALKRCFP-Q 226 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~---~~G~~V~~~~~~~~~~~~~~~--~~g~~---~vi~~~~~~---~~~~~i~~~~~-g 226 (347)
++|||+||++++|++.++.+. ..|++|+++++++++.+.+++ +.+.. ..+|..+++ .+.+.+++... +
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 82 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ 82 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence 589999999999999876553 358899999999987665541 11221 234555442 34444544433 4
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
.+|+++++.|
T Consensus 83 ~iDiLvnNAg 92 (248)
T d1snya_ 83 GLNVLFNNAG 92 (248)
T ss_dssp CCSEEEECCC
T ss_pred CcceEEeecc
Confidence 7999999877
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.12 E-value=0.0011 Score=55.31 Aligned_cols=103 Identities=11% Similarity=0.030 Sum_probs=70.3
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHC
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~ 224 (347)
-+.+..++++|++||=+| .|.|..++.+|+..|++|++++.|+++.+++++. .|...-++.... ++ ++ .
T Consensus 53 ~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~-~ 124 (285)
T d1kpga_ 53 LALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQ-F 124 (285)
T ss_dssp HHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GG-C
T ss_pred HHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hc-c
Confidence 344668899999999999 4678889999999999999999999988887632 233211111110 11 11 1
Q ss_pred CCCccEEEe-----CCCh----hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFD-----NVGG----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
++.||.++. ..+. ..++.+.+.|+|+|+++.-..
T Consensus 125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i 167 (285)
T d1kpga_ 125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 167 (285)
T ss_dssp CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence 346887754 3332 257788889999999986443
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=97.09 E-value=0.0016 Score=48.68 Aligned_cols=102 Identities=19% Similarity=0.171 Sum_probs=75.4
Q ss_pred HHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHH
Q 019012 145 AYAGFHEVCS-PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRC 223 (347)
Q Consensus 145 a~~al~~~~~-~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~ 223 (347)
.+.++.+..+ +-.|++++|.| -|-+|.-.++-++.+|++|+++..++-+.-++. --|. ++. +..+.++
T Consensus 9 ~~d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~~-- 77 (163)
T d1v8ba1 9 LPDGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIVD-- 77 (163)
T ss_dssp HHHHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHTT--
T ss_pred HHHHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHccc--
Confidence 3444444333 47899999999 699999999999999999999999987644443 3343 232 2222222
Q ss_pred CCCCccEEEeCCChh--hHHHHHHhhhcCCeEEEEcccc
Q 019012 224 FPQGIDIYFDNVGGE--MLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 224 ~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
..|+++-++|.. .-.+.++.|+++..+..+|-.+
T Consensus 78 ---~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd 113 (163)
T d1v8ba1 78 ---KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD 113 (163)
T ss_dssp ---TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred ---cCcEEEEcCCCCccccHHHHHHhhCCeEEEeccccc
Confidence 489999999984 3567899999999999998643
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.0031 Score=48.77 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHH---HHc----CC-CeeeecCCHHHHHHHHHHHCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLK---NKL----GF-DEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~---~~~----g~-~~vi~~~~~~~~~~~i~~~~~g 226 (347)
-++.+|||+|+ |+.|.+++..+...|+ +++++.++.++.+.+. +++ .. ....+..+...+.+.+.
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 89 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----- 89 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----
Confidence 46789999996 9999999999988999 8999998876554432 122 22 22345544323333333
Q ss_pred CccEEEeCCChh-------hHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVGGE-------MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+|++|+|+.-. .+..-+..++++..++.+-.
T Consensus 90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y 128 (182)
T d1vi2a1 90 SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY 128 (182)
T ss_dssp TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred ccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence 489999998631 11112345667777776643
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.08 E-value=0.0013 Score=54.53 Aligned_cols=80 Identities=11% Similarity=0.138 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChHh---HHHHHHHcCCCe--eeecCCHHHHH---HHHHHHCC
Q 019012 156 KSGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQK---VDLLKNKLGFDE--AFNYNDETDLV---AALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~~---~~~~~~~~g~~~--vi~~~~~~~~~---~~i~~~~~ 225 (347)
-+|+++||+||+| ++|.+.++.+...|++|+.++++++. .+.+.++.+... ..|...+.+.. +++.+..
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~- 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL- 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc-
Confidence 4689999999876 79999999999999999999998743 333331222222 23444432333 3333332
Q ss_pred CCccEEEeCCC
Q 019012 226 QGIDIYFDNVG 236 (347)
Q Consensus 226 g~~d~vid~~g 236 (347)
+.+|+++.+.|
T Consensus 82 g~id~lV~nag 92 (274)
T d2pd4a1 82 GSLDFIVHSVA 92 (274)
T ss_dssp SCEEEEEECCC
T ss_pred CCCCeEEeecc
Confidence 46999998887
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0023 Score=53.39 Aligned_cols=103 Identities=19% Similarity=0.221 Sum_probs=64.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEE---EEEECChHhHHHHH---HHcCC---C---eeeecCCHHHHHHHHHHHCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYV---VGSAGSSQKVDLLK---NKLGF---D---EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V---~~~~~~~~~~~~~~---~~~g~---~---~vi~~~~~~~~~~~i~~~~~g 226 (347)
+.|||+||++++|++.+..+...|++| ..++++.++.+.+. +++.. . ..+|..+.++....+.+...|
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 356899999999999998888889864 44555444332222 13322 1 235666654555555555556
Q ss_pred CccEEEeCCChh-----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 227 GIDIYFDNVGGE-----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 227 ~~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
..|+++++.|.. .+ +.++..|.+ +|++|.++...+
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g 145 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG 145 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence 899999988731 11 234445533 689999887554
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.01 E-value=0.004 Score=47.56 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=62.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+++|||+|| |.+|..+++.+...|.+|++++++.++.+.+.+.++...+. .... .......... ...|.++.+...
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~-~~~~~~~~~i-~~~~~~i~~~~~ 77 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPI-SLDV-NDDAALDAEV-AKHDLVISLIPY 77 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCT-TCHHHHHHHH-TTSSEEEECSCG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccc-cccc-cchhhhHhhh-hccceeEeeccc
Confidence 578999997 99999999999998999999999999998887455542222 2111 1111111111 147888888776
Q ss_pred h-hHHHHHHhhhcCCeEEEEc
Q 019012 238 E-MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 238 ~-~~~~~~~~l~~~G~~v~~g 257 (347)
. .......++..+..++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~ 98 (182)
T d1e5qa1 78 TFHATVIKSAIRQKKHVVTTS 98 (182)
T ss_dssp GGHHHHHHHHHHHTCEEECSS
T ss_pred hhhhHHHHHHHhhccceeecc
Confidence 4 3444445555666666554
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.98 E-value=0.00079 Score=54.82 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=67.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCE-------EEEEECChHhHHHHHHHc---CCC---eeeecCCHHHHHH---HHHHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCY-------VVGSAGSSQKVDLLKNKL---GFD---EAFNYNDETDLVA---ALKRC 223 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~-------V~~~~~~~~~~~~~~~~~---g~~---~vi~~~~~~~~~~---~i~~~ 223 (347)
.|||+||++++|++.+..+...|++ |+.+++++++.+.+.+++ |.. ...|-++.+++.+ .+.+.
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4799999999999988888888886 899999988877665333 432 1246665533333 33332
Q ss_pred CCCCccEEEeCCChh-----------hH---------------HHHHHhhhc--CCeEEEEccccc
Q 019012 224 FPQGIDIYFDNVGGE-----------ML---------------DAALLNMRD--HGRIAVCGMVSL 261 (347)
Q Consensus 224 ~~g~~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~ 261 (347)
. |.+|+++++.|.. .+ +.++..|++ +|+++.++....
T Consensus 83 ~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~ 147 (240)
T d2bd0a1 83 Y-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA 147 (240)
T ss_dssp T-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred c-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence 2 4799999998731 11 335555643 689999876544
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.93 E-value=0.0018 Score=50.39 Aligned_cols=99 Identities=16% Similarity=0.051 Sum_probs=66.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-----------------eecCCH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-----------------FNYNDE 213 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-----------------i~~~~~ 213 (347)
....+.+|.+||..|+ |.|..++.+|+. |++|++++.|++..+.+++..+.... +..+-.
T Consensus 14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 90 (201)
T d1pjza_ 14 SSLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 90 (201)
T ss_dssp HHHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HHcCCCCCCEEEEecC--cCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence 3456899999999994 567888889875 99999999999999999854432111 100000
Q ss_pred HHHHHHHHHHCCCCccEEEeCCCh---------hhHHHHHHhhhcCCeEEEEc
Q 019012 214 TDLVAALKRCFPQGIDIYFDNVGG---------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 214 ~~~~~~i~~~~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g 257 (347)
++..... ..+|++++...- ..++...+.|+++|+++...
T Consensus 91 -~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~ 138 (201)
T d1pjza_ 91 -ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 138 (201)
T ss_dssp -SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred -ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence 1111111 158998875441 24677888999999987644
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=96.93 E-value=0.0026 Score=52.34 Aligned_cols=82 Identities=13% Similarity=0.245 Sum_probs=56.5
Q ss_pred CCCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEECChHhH-HHHHHHcCCC---eeeecCCHH---HHHHHHHHHCC
Q 019012 155 PKSGEYVFVSAAS--GAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKLGFD---EAFNYNDET---DLVAALKRCFP 225 (347)
Q Consensus 155 ~~~~~~vLI~Ga~--g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~~~g~~---~vi~~~~~~---~~~~~i~~~~~ 225 (347)
+-+|+++||+||+ .++|++.++-+...|++|+.++++.++. +.+.++++.. ...|..+++ ++.+.+.+...
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 4568999999964 4699999998999999999999887765 4454356542 233444431 34444444333
Q ss_pred --CCccEEEeCCC
Q 019012 226 --QGIDIYFDNVG 236 (347)
Q Consensus 226 --g~~d~vid~~g 236 (347)
+..|+++.+.|
T Consensus 83 ~~~~ld~~i~~ag 95 (268)
T d2h7ma1 83 AGNKLDGVVHSIG 95 (268)
T ss_dssp TTCCEEEEEECCC
T ss_pred cCCCcceeeeccc
Confidence 26899999887
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.92 E-value=0.0021 Score=53.42 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=69.1
Q ss_pred HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHH
Q 019012 146 YAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 146 ~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~ 222 (347)
+..+.+..++++|++||=+|+ +.|..+..+++..|++|++++.|++..+++++. .|....+..... ++ ++
T Consensus 41 ~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~~ 113 (280)
T d2fk8a1 41 VDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----ED 113 (280)
T ss_dssp HHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GG
T ss_pred HHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----hh
Confidence 334546678999999999994 345567778888899999999999988877633 344211111110 11 11
Q ss_pred HCCCCccEEEe-----CCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 223 CFPQGIDIYFD-----NVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 223 ~~~g~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
..+.||.|+. ..+. ..++...+.|+|+|+++.-.
T Consensus 114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~ 156 (280)
T d2fk8a1 114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 156 (280)
T ss_dssp -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence 1346888854 2332 25778899999999998743
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.89 E-value=0.0018 Score=52.02 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=65.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHc---CCC-------eeeecCCHHHHHHHH
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKL---GFD-------EAFNYNDETDLVAAL 220 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~---g~~-------~vi~~~~~~~~~~~i 220 (347)
..+++|++||-.| .+.|..++.+|+..|. +|+.++.+++-.+.+++.+ +.. .+...+. ..-.
T Consensus 72 ~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~----~~~~ 145 (224)
T d1i1na_ 72 DQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG----RMGY 145 (224)
T ss_dssp TTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG----GGCC
T ss_pred hccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec----cccc
Confidence 3789999999999 5678888899988763 9999999998777665322 221 1111110 0000
Q ss_pred HHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEE
Q 019012 221 KRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 221 ~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 256 (347)
. ..+.||.++-+.+- ...+..++.|++||+++..
T Consensus 146 ~--~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 146 A--EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp G--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred c--hhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 0 01269999877664 4567889999999999884
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.83 E-value=0.002 Score=52.92 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHH-HHHH--CCCEEEEEECChHhHHHHHHHc-----CCC---eeeecCCHHHH---HHHHHH
Q 019012 157 SGEYVFVSAASGAVGQLVGQ-LAKL--HGCYVVGSAGSSQKVDLLKNKL-----GFD---EAFNYNDETDL---VAALKR 222 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~-la~~--~G~~V~~~~~~~~~~~~~~~~~-----g~~---~vi~~~~~~~~---~~~i~~ 222 (347)
.|+.+||+||++++|++.++ +|+. .|++|+.+++++++++.+.+++ +.. ...|-.++++. .+.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 57889999999999988665 5553 5999999999999887765443 211 12455554233 333444
Q ss_pred HC--CC-CccEEEeCCC
Q 019012 223 CF--PQ-GIDIYFDNVG 236 (347)
Q Consensus 223 ~~--~g-~~d~vid~~g 236 (347)
.. .+ ..|+++++.|
T Consensus 85 ~~~~~~~~~~~lvnnag 101 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAA 101 (259)
T ss_dssp SCCCTTCCEEEEEECCC
T ss_pred hhhhccCceEEEEeccc
Confidence 32 22 5788888765
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.83 E-value=0.00044 Score=55.60 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=60.6
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC---C----CEEEEEECChHhHHHHHHHc--------CCCeeeecCCHHHHH
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH---G----CYVVGSAGSSQKVDLLKNKL--------GFDEAFNYNDETDLV 217 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~---G----~~V~~~~~~~~~~~~~~~~~--------g~~~vi~~~~~~~~~ 217 (347)
..+++|++||..| ++.|+.++.+++.. | .+|+.++.+++-.+.+++.+ +...+.-... +..
T Consensus 76 ~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~--d~~ 151 (223)
T d1r18a_ 76 DHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG--DGR 151 (223)
T ss_dssp TTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES--CGG
T ss_pred hccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec--ccc
Confidence 3789999999999 45666666666554 4 38999999887666654221 2111211111 110
Q ss_pred HHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEE
Q 019012 218 AALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 256 (347)
.... ..+.||.++-+.+- ..-+..++.|++||+++..
T Consensus 152 ~~~~--~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p 189 (223)
T d1r18a_ 152 KGYP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP 189 (223)
T ss_dssp GCCG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred cccc--cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence 0000 01369988776664 3456778899999999884
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.81 E-value=0.0039 Score=50.88 Aligned_cols=94 Identities=19% Similarity=0.166 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC-eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD-EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
.++|++||=.|+ | .|..++.+++ .|++|++++.++...+.+++ ..|.. .++.. +..+. ...+.||+
T Consensus 118 ~~~g~~VLDiGc-G-sG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~----d~~~~---~~~~~fD~ 187 (254)
T d2nxca1 118 LRPGDKVLDLGT-G-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG----SLEAA---LPFGPFDL 187 (254)
T ss_dssp CCTTCEEEEETC-T-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES----CHHHH---GGGCCEEE
T ss_pred cCccCEEEEccc-c-hhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEec----ccccc---ccccccch
Confidence 579999999995 3 4666776554 68999999999988777763 24543 23322 22211 22247999
Q ss_pred EEeCCChh----hHHHHHHhhhcCCeEEEEcc
Q 019012 231 YFDNVGGE----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 231 vid~~g~~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+...... .+....+.|+|+|+++..|.
T Consensus 188 V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi 219 (254)
T d2nxca1 188 LVANLYAELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp EEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 99765532 45677889999999998764
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.77 E-value=0.0023 Score=48.97 Aligned_cols=93 Identities=11% Similarity=0.005 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
..++++|+|+|+ |+.+.+++..+...+.+|+++.|+.++.+.+.+.++.. ..+.... .....+|++
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----------~~~~~~dii 83 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----------IPLQTYDLV 83 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------CCCSCCSEE
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc----------cccccccee
Confidence 457889999996 99999998888776779999999999888776555421 1222111 111369999
Q ss_pred EeCCChhh----HHHHHHhhhcCCeEEEEcc
Q 019012 232 FDNVGGEM----LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 232 id~~g~~~----~~~~~~~l~~~G~~v~~g~ 258 (347)
|+|+.... .......++++..++.+-.
T Consensus 84 IN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy 114 (171)
T d1p77a1 84 INATSAGLSGGTASVDAEILKLGSAFYDMQY 114 (171)
T ss_dssp EECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred eecccccccccccchhhhhhcccceeeeeec
Confidence 99987421 1112344566776666543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.0049 Score=50.33 Aligned_cols=81 Identities=12% Similarity=0.203 Sum_probs=53.6
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCee--eecCCHHHHHHHHHHHCC--C
Q 019012 156 KSGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEA--FNYNDETDLVAALKRCFP--Q 226 (347)
Q Consensus 156 ~~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~v--i~~~~~~~~~~~i~~~~~--g 226 (347)
-+|+++||+||++ ++|.+.+..+...|++|+.++++++..+.+.+ ..+.... .+..+..+....+.+... +
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4689999999988 78899999999999999999998765554431 2333222 233332133333333322 3
Q ss_pred CccEEEeCCC
Q 019012 227 GIDIYFDNVG 236 (347)
Q Consensus 227 ~~d~vid~~g 236 (347)
..|+.+++.+
T Consensus 83 ~~d~~v~~a~ 92 (258)
T d1qsga_ 83 KFDGFVHSIG 92 (258)
T ss_dssp SEEEEEECCC
T ss_pred ccceEEEeec
Confidence 7899998765
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.76 E-value=0.0021 Score=49.90 Aligned_cols=98 Identities=19% Similarity=0.178 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC-e--eeecCCHHHHHHHHHHHC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD-E--AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~--vi~~~~~~~~~~~i~~~~ 224 (347)
...++++|++||=.|+ +.|..++.+|+. +.+|++++.+++..+.+++ ++|.. . ++.. +..+.+. .
T Consensus 27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g----da~~~~~--~ 97 (186)
T d1l3ia_ 27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG----DAPEALC--K 97 (186)
T ss_dssp HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES----CHHHHHT--T
T ss_pred HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC----chhhccc--c
Confidence 4568899999999984 456666777764 5699999999988777763 35653 2 2322 2222221 1
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYFDNVGG----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 257 (347)
...+|+++-..+. +.++.+.+.|+++|+++...
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 134 (186)
T d1l3ia_ 98 IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (186)
T ss_dssp SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence 1379988865442 36778888999999988654
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=96.71 E-value=0.0037 Score=50.07 Aligned_cols=104 Identities=12% Similarity=0.053 Sum_probs=71.9
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHH---
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRC--- 223 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~--- 223 (347)
..+....++||=+| +.+|..++.+|+.+ +.+|+.++.+++..+.+++ +.|...-+..... +..+.+.++
T Consensus 54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~~ 130 (227)
T d1susa1 54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD 130 (227)
T ss_dssp HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHhc
Confidence 34456678999999 78899999999987 4599999999988777663 3466433332222 333334333
Q ss_pred --CCCCccEEE-eCCCh---hhHHHHHHhhhcCCeEEEEcc
Q 019012 224 --FPQGIDIYF-DNVGG---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 224 --~~g~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
..+.||+|| |+--. ..++.+++.|++||.++.=..
T Consensus 131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv 171 (227)
T d1susa1 131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT 171 (227)
T ss_dssp GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence 234799997 54443 368899999999999887543
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.71 E-value=0.0056 Score=46.99 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=58.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee------------eecCCHHHHHHHHHHHCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA------------FNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v------------i~~~~~~~~~~~i~~~~~g 226 (347)
+++.|+|+ |.+|++.+..+...|.+|++.++++++.+.++ +.+.... .... +..+.++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~e~~~----- 71 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTS---DIGLAVK----- 71 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEES---CHHHHHT-----
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhh---hhHhHhc-----
Confidence 68999997 99999999999999999999999999998888 6553110 0111 2233332
Q ss_pred CccEEEeCCChhhHHHHHHhhhc
Q 019012 227 GIDIYFDNVGGEMLDAALLNMRD 249 (347)
Q Consensus 227 ~~d~vid~~g~~~~~~~~~~l~~ 249 (347)
.+|++|-++.....+..++.+++
T Consensus 72 ~aD~iii~v~~~~~~~~~~~i~~ 94 (184)
T d1bg6a2 72 DADVILIVVPAIHHASIAANIAS 94 (184)
T ss_dssp TCSEEEECSCGGGHHHHHHHHGG
T ss_pred CCCEEEEEEchhHHHHHHHHhhh
Confidence 48999999987655555554443
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.00076 Score=54.47 Aligned_cols=99 Identities=8% Similarity=-0.043 Sum_probs=65.7
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--CeeeecCCHHHHHHHHHHHCCCCccEE-
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--DEAFNYNDETDLVAALKRCFPQGIDIY- 231 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~i~~~~~g~~d~v- 231 (347)
..+|.+||-+| .+.|..+..+++..+.+|++++.++.-.+.+++.... ..+..... +.......+..+.||.+
T Consensus 51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~fD~i~ 126 (229)
T d1zx0a1 51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG--LWEDVAPTLPDGHFDGIL 126 (229)
T ss_dssp TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES--CHHHHGGGSCTTCEEEEE
T ss_pred ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc--ccccccccccccccccee
Confidence 36789999999 5677888888887677999999999988888833321 11111111 22223333344578887
Q ss_pred EeCCCh-----------hhHHHHHHhhhcCCeEEEEc
Q 019012 232 FDNVGG-----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 232 id~~g~-----------~~~~~~~~~l~~~G~~v~~g 257 (347)
+|.... ..+..+.+.|+|||+++...
T Consensus 127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~ 163 (229)
T d1zx0a1 127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 163 (229)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence 465432 14566888999999998754
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.68 E-value=0.011 Score=41.57 Aligned_cols=89 Identities=7% Similarity=-0.019 Sum_probs=61.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh-H-HHHHHHcCCCeeee--cCCHHHHHHHHHHHCCCCccEEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK-V-DLLKNKLGFDEAFN--YNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~-~-~~~~~~~g~~~vi~--~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
.|.+|||.|+ |.+|..-++.+...|++|++++..... . .++. +-+.. .+. +... + + .++++|+
T Consensus 11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i~-~~~~~~~~~-d----l-----~~~~lv~ 77 (113)
T d1pjqa1 11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGMLT-LVEGPFDET-L----L-----DSCWLAI 77 (113)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSCE-EEESSCCGG-G----G-----TTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCce-eeccCCCHH-H----h-----CCCcEEe
Confidence 4789999997 999999999999999999888764432 2 2222 22222 222 1111 1 1 2589999
Q ss_pred eCCChhhH-HHHHHhhhcCCeEEEEcc
Q 019012 233 DNVGGEML-DAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 233 d~~g~~~~-~~~~~~l~~~G~~v~~g~ 258 (347)
-+++.+.+ .+..+..++.|.+|.+..
T Consensus 78 ~at~d~~~n~~i~~~a~~~~ilVNv~D 104 (113)
T d1pjqa1 78 AATDDDTVNQRVSDAAESRRIFCNVVD 104 (113)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred ecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 99987654 567778889999998764
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=96.64 E-value=0.0013 Score=54.71 Aligned_cols=104 Identities=9% Similarity=0.039 Sum_probs=70.9
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHH
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKR 222 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~ 222 (347)
|.....+.++.+||=+|+ +.|..+..+++..|++|++++.++...+.+++ ..|.. .++..+.. + + .
T Consensus 59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~-~----l-~ 130 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-E----I-P 130 (282)
T ss_dssp HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-S----C-S
T ss_pred HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccc-c----c-c
Confidence 335578899999999994 46777888888889999999999987776663 23442 12222211 1 1 0
Q ss_pred HCCCCccEEEeCCCh-------hhHHHHHHhhhcCCeEEEEcccc
Q 019012 223 CFPQGIDIYFDNVGG-------EMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 223 ~~~g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
+..+.||+|+-.-.- ..+.++.+.|+|+|+++......
T Consensus 131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 175 (282)
T d2o57a1 131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 175 (282)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 112479999753321 26788999999999998876543
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.56 E-value=0.0029 Score=51.05 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=67.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.++.+||=.|+ |.|..+..+++ .|++|++++.+++..+.++ +.+....+..... ++ ....+.||+|+..
T Consensus 40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~~ 109 (246)
T d2avna1 40 LKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLAL 109 (246)
T ss_dssp CCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEEC
T ss_pred cCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceeee
Confidence 457789998884 47888888876 4999999999999999999 6666555554432 21 1223479998865
Q ss_pred CCh--------hhHHHHHHhhhcCCeEEEE
Q 019012 235 VGG--------EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 235 ~g~--------~~~~~~~~~l~~~G~~v~~ 256 (347)
... ..+++..+.|++||.++..
T Consensus 110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~ 139 (246)
T d2avna1 110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT 139 (246)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence 431 2577888999999998764
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.54 E-value=0.0067 Score=49.64 Aligned_cols=101 Identities=17% Similarity=0.094 Sum_probs=70.3
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHc-----C-CCeeeecCCHHHHHHHHHH
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKL-----G-FDEAFNYNDETDLVAALKR 222 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~-----g-~~~vi~~~~~~~~~~~i~~ 222 (347)
...+++||++||=.| .+.|.+++.+|+..|. +|+.++.+++..+.+++.+ + .+.+-.... +..+ ..
T Consensus 90 ~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~--d~~~--~~ 163 (264)
T d1i9ga_ 90 HEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLAD--SE 163 (264)
T ss_dssp HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGG--CC
T ss_pred HHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec--cccc--cc
Confidence 568899999999998 5678889999999864 9999999999888887422 1 122211111 1110 01
Q ss_pred HCCCCccEEEeCCCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 223 CFPQGIDIYFDNVGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 223 ~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
+..+.||.||--... ..+..+.+.|+++|+++++.
T Consensus 164 ~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~ 200 (264)
T d1i9ga_ 164 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV 200 (264)
T ss_dssp CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence 112379977644443 57899999999999998874
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.003 Score=42.85 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh--HHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK--VDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~--~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+|++|+|+|. |.+|+++++++...|++|++.+.+... .+.++ . +....+..... . .+. .+|.++-+
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~-~-~~~~~~~~~~~-~---~~~-----~~d~vi~S 71 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-E-AVERHTGSLND-E---WLM-----AADLIVAS 71 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC-T-TSCEEESBCCH-H---HHH-----HCSEEEEC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh-h-ccceeecccch-h---hhc-----cCCEEEEC
Confidence 4778999996 999999999999999999999985542 22222 1 22222333222 2 222 37888887
Q ss_pred CChh
Q 019012 235 VGGE 238 (347)
Q Consensus 235 ~g~~ 238 (347)
-|-+
T Consensus 72 PGi~ 75 (93)
T d2jfga1 72 PGIA 75 (93)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 7743
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.51 E-value=0.0042 Score=49.98 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=69.2
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHH
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKR 222 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~ 222 (347)
.+...+.+++|++||=+|+ |.|..+..+++. +.+|++++.|+...+.+++ ..+... .+..+.. ++ .
T Consensus 7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~-~~-----~ 77 (234)
T d1xxla_ 7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SL-----P 77 (234)
T ss_dssp HHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BC-----C
T ss_pred HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccc-cc-----c
Confidence 3557789999999999994 567777888774 6899999999987776653 234322 1211111 10 1
Q ss_pred HCCCCccEEEeCCCh-------hhHHHHHHhhhcCCeEEEEcc
Q 019012 223 CFPQGIDIYFDNVGG-------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 223 ~~~g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.++.||+|+-+-.- ..++++.+.|+|+|+++....
T Consensus 78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~~ 120 (234)
T d1xxla_ 78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 120 (234)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEEc
Confidence 123479999864431 268889999999999888643
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=96.49 E-value=0.0086 Score=48.94 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=31.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~ 194 (347)
+.||+||++++|.+.+..+...|++|+.++++.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence 57999999999999999999999999999987553
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.47 E-value=0.0043 Score=49.55 Aligned_cols=71 Identities=27% Similarity=0.208 Sum_probs=47.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.+|||+||+|.+|...+..+...|. .|+...+++++...+. -++.. ..|..+.+++.+.+ .++|.|+.+.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~-----~~~d~vi~~a 76 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAF-----QGIDALVILT 76 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHH-----TTCSEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeecccccccccc-----ccceeeEEEE
Confidence 6899999999999999999988885 5777788877655433 22322 23444432222222 2489999887
Q ss_pred C
Q 019012 236 G 236 (347)
Q Consensus 236 g 236 (347)
+
T Consensus 77 ~ 77 (252)
T d2q46a1 77 S 77 (252)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=96.35 E-value=0.0048 Score=49.34 Aligned_cols=100 Identities=13% Similarity=0.158 Sum_probs=68.3
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHHC
Q 019012 150 HEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 150 ~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~ 224 (347)
.+.++++++++||=+|+ +.|..+..+++. |.+|++++.+++..+.+++ +.+... ++..+.. + + .+.
T Consensus 8 l~~~~l~~~~rVLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~----l-~~~ 78 (231)
T d1vl5a_ 8 MQIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-Q----M-PFT 78 (231)
T ss_dssp HHHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--C----C-CSC
T ss_pred HHhcCCCCcCEEEEecc--cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccccc-c----c-ccc
Confidence 36688999999999994 367777777754 7899999999987776652 234432 2222221 1 1 112
Q ss_pred CCCccEEEeCCC-----h--hhHHHHHHhhhcCCeEEEEcc
Q 019012 225 PQGIDIYFDNVG-----G--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 225 ~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+.||+|+-.-. . ..+.++.++|+|||+++....
T Consensus 79 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 119 (231)
T d1vl5a_ 79 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 119 (231)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 347999986433 1 368899999999999998654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.30 E-value=0.033 Score=41.06 Aligned_cols=98 Identities=22% Similarity=0.252 Sum_probs=64.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChH--hH-HHHHHHcCCCeeeecCCH--HHHHH-------------
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQ--KV-DLLKNKLGFDEAFNYNDE--TDLVA------------- 218 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~--~~-~~~~~~~g~~~vi~~~~~--~~~~~------------- 218 (347)
++|.|+|++|++|..++++.+.. .++|++.+...+ ++ +.++ +|....+.-.++. ..+..
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~-ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~ 81 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK-RTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA 81 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH-HTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH-hhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence 78999999999999999999887 468776554433 33 3344 7877655433321 01111
Q ss_pred -HHHHHCCCCccEEEeCCCh-hhHHHHHHhhhcCCeEEEEc
Q 019012 219 -ALKRCFPQGIDIYFDNVGG-EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 219 -~i~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.+.....+|+++.++.+ ..+...+.+++.+-++....
T Consensus 82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLAN 122 (150)
T d1r0ka2 82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALAN 122 (150)
T ss_dssp HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEECC
T ss_pred cchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEec
Confidence 1122222258999999765 67888899998887766653
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.23 E-value=0.0086 Score=49.86 Aligned_cols=37 Identities=14% Similarity=0.200 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEECChH
Q 019012 157 SGEYVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 157 ~~~~vLI~Ga~g--~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
+|+++||+||+| ++|++.++.+...|++|+++.+++.
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~ 45 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA 45 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence 689999999876 8999999999999999999987654
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.22 E-value=0.011 Score=42.88 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=54.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+++|.|+ |.+|..+++.+...|.+|++++.++++.+.++ +.+... +.|..++ + .+++..-..+|.++-+++.+
T Consensus 2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~---~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-N---ELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-T---HHHHHTGGGCSEEEECCCSC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-h---hhhccCCccccEEEEEcCch
Confidence 4788886 99999999999999999999999999999988 777532 2334333 2 23333223689888888753
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.19 E-value=0.016 Score=43.64 Aligned_cols=85 Identities=16% Similarity=0.160 Sum_probs=58.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-CeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+|.|.|. |.+|...+..++..|.+|++.++++++.+.++ +.|. +...+..+ .+ ...|++|-|+...
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~~------~~-----~~~DiIilavp~~ 68 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDLS------LL-----QTAKIIFLCTPIQ 68 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCGG------GG-----TTCSEEEECSCHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeecc------cc-----cccccccccCcHh
Confidence 5788995 99999888888889999999999999999988 7775 33322211 11 2488898888754
Q ss_pred hHHHHHHh----hhcCCeEEEEc
Q 019012 239 MLDAALLN----MRDHGRIAVCG 257 (347)
Q Consensus 239 ~~~~~~~~----l~~~G~~v~~g 257 (347)
..+..++. +.++-.++.++
T Consensus 69 ~~~~vl~~l~~~l~~~~iv~~~~ 91 (165)
T d2f1ka2 69 LILPTLEKLIPHLSPTAIVTDVA 91 (165)
T ss_dssp HHHHHHHHHGGGSCTTCEEEECC
T ss_pred hhhhhhhhhhhhcccccceeecc
Confidence 44444444 34445554454
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.18 E-value=0.022 Score=42.24 Aligned_cols=83 Identities=23% Similarity=0.316 Sum_probs=56.2
Q ss_pred EEEEEcCCchHHHHHHH-HHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQ-LAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~-la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+|.+.|+ |.+|.+.++ +.+.-+.+|++.++++++.+.+++++|+. +.+..+. + ...|++|=|+-..
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~~------v-----~~~Div~lavkP~ 68 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLPE------L-----HSDDVLILAVKPQ 68 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCCC------C-----CTTSEEEECSCHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-ccccccc------c-----cccceEEEecCHH
Confidence 5788896 999998777 44554479999999999988887567763 2222221 1 1368888777665
Q ss_pred hHHHHHHhhhcCCeEEE
Q 019012 239 MLDAALLNMRDHGRIAV 255 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~ 255 (347)
.+...++.+.+.++++.
T Consensus 69 ~~~~v~~~l~~~~~~vi 85 (152)
T d1yqga2 69 DMEAACKNIRTNGALVL 85 (152)
T ss_dssp HHHHHHTTCCCTTCEEE
T ss_pred HHHHhHHHHhhcccEEe
Confidence 66666666666555443
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.12 E-value=0.018 Score=42.81 Aligned_cols=86 Identities=10% Similarity=0.108 Sum_probs=64.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|.+.|+ |.+|.+.+.-+...|.++++..++.++.+.+.+++|+..+- +..+.++ ..|+||-|+-...
T Consensus 2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~ 69 (152)
T d2ahra2 2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL 69 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence 4778895 99999888877777889999999998888876578864322 2222233 3899999998777
Q ss_pred HHHHHHhhhcCCeEEEEc
Q 019012 240 LDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g 257 (347)
+...++.+.++-.++++.
T Consensus 70 ~~~vl~~l~~~~~iis~~ 87 (152)
T d2ahra2 70 FETVLKPLHFKQPIISMA 87 (152)
T ss_dssp HHHHHTTSCCCSCEEECC
T ss_pred HHHHhhhcccceeEeccc
Confidence 888888888877776554
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.0085 Score=47.59 Aligned_cols=105 Identities=13% Similarity=0.059 Sum_probs=70.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHH----H
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAAL----K 221 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i----~ 221 (347)
...+....++||=+| +..|..++.+|+.+ +.+|+.++.+++..+.+++ +.|....+..... +..+.+ .
T Consensus 53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~ 129 (219)
T d2avda1 53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA 129 (219)
T ss_dssp HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence 345556778999999 77899999999887 4599999999987666653 3465432322221 222223 2
Q ss_pred HHCCCCccEEEeCCC-h---hhHHHHHHhhhcCCeEEEEcc
Q 019012 222 RCFPQGIDIYFDNVG-G---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 222 ~~~~g~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
....+.||+||--.. . ..++.+++.|++||.++.=..
T Consensus 130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~ 170 (219)
T d2avda1 130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 170 (219)
T ss_dssp TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 223347999875433 2 367899999999999987443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.05 E-value=0.037 Score=40.01 Aligned_cols=75 Identities=20% Similarity=0.207 Sum_probs=46.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 238 (347)
+|.|.|++|-+|...++..... ++++.......+...... . .++|++||++..+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-~------------------------~~~DvvIDFS~p~ 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-D------------------------GNTEVVIDFTHPD 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-T------------------------TTCSEEEECCCTT
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-c------------------------ccCCEEEEcccHH
Confidence 5889999999999988887655 667776553322222222 1 2466777766666
Q ss_pred hHHHHHHhhhcCCeEEEEccc
Q 019012 239 MLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 239 ~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.....++.+...|.=+.+|.+
T Consensus 56 ~~~~~~~~~~~~~~~~ViGTT 76 (135)
T d1yl7a1 56 VVMGNLEFLIDNGIHAVVGTT 76 (135)
T ss_dssp THHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEecc
Confidence 555555555555555555543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=96.04 E-value=0.0075 Score=49.88 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=29.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
.+||+||++++|++.++.+...|++|++++++.
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~ 36 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS 36 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 469999999999999999999999999887654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.03 E-value=0.012 Score=45.74 Aligned_cols=86 Identities=20% Similarity=0.184 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|.|+| .|.+|...+++++.+|++|++.++..+... . ..+.. .. ++.+.+++ .|+++-+..
T Consensus 42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~-~~~~~----~~---~l~~~l~~-----sDii~~~~p 105 (197)
T d1j4aa1 42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPEL--E-KKGYY----VD---SLDDLYKQ-----ADVISLHVP 105 (197)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHH--H-HTTCB----CS---CHHHHHHH-----CSEEEECSC
T ss_pred cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccc--c-cceee----ec---cccccccc-----cccccccCC
Confidence 578999999 599999999999999999999986654322 1 22221 11 34444554 788888765
Q ss_pred h--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 237 G--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
. + .-...++.|+++..+|.++-
T Consensus 106 lt~~T~~li~~~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 106 DVPANVHMINDESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred ccccccccccHHHHhhhCCccEEEecCc
Confidence 2 1 23677888888888887754
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.99 E-value=0.0074 Score=51.46 Aligned_cols=47 Identities=32% Similarity=0.355 Sum_probs=40.3
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
.-+.+|++|||+||+|-+|...+..+...|.+|+++.++.++.+.++
T Consensus 6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~ 52 (342)
T d1y1pa1 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence 34578999999999999999999888888999999999887766554
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.93 E-value=0.013 Score=46.80 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=66.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCee-------------------eecC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-------------------FNYN 211 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~v-------------------i~~~ 211 (347)
....+.++.+||..|+ | .|..+..+|+ .|++|++++.|+...+.++++.+.... ++..
T Consensus 39 ~~l~~~~~~rvLd~GC-G-~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 115 (229)
T d2bzga1 39 TFLKGKSGLRVFFPLC-G-KAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY 115 (229)
T ss_dssp HHHTTCCSCEEEETTC-T-TCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred HhcCCCCCCEEEEeCC-C-CcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence 3356788999999994 3 4788888886 599999999999988888744442110 0000
Q ss_pred CHHHHHHHHHHHCCCCccEEEeCCCh---------hhHHHHHHhhhcCCeEEEEcc
Q 019012 212 DETDLVAALKRCFPQGIDIYFDNVGG---------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 212 ~~~~~~~~i~~~~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. ++. .+.....+.+|+|+++..- ..+....++|+++|+++....
T Consensus 116 ~~-d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~ 169 (229)
T d2bzga1 116 CC-SIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL 169 (229)
T ss_dssp ES-CGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Ec-chh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence 00 000 0111112368999987641 256788899999999876654
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.75 E-value=0.022 Score=49.43 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=67.9
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHH---c-------CCC---eeeec----
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK---L-------GFD---EAFNY---- 210 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~---~-------g~~---~vi~~---- 210 (347)
+.+..++++|+++|=+| .|+|..++++|+..|+ +|++++.++...+.+++. + |.. ..+..
T Consensus 208 Il~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f 285 (406)
T d1u2za_ 208 VYQQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 285 (406)
T ss_dssp HHHHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech
Confidence 33668899999999998 6789999999999987 899999999877666521 1 110 01111
Q ss_pred -CCHHHHHHHHHHHCCCCccEEEeCCC---h---hhHHHHHHhhhcCCeEEEEcc
Q 019012 211 -NDETDLVAALKRCFPQGIDIYFDNVG---G---EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 211 -~~~~~~~~~i~~~~~g~~d~vid~~g---~---~~~~~~~~~l~~~G~~v~~g~ 258 (347)
..+ .+...+ ..+|+++-... . ..+.+.++.|++||++++...
T Consensus 286 ~~~~-~~d~~~-----~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~~ 334 (406)
T d1u2za_ 286 VDNN-RVAELI-----PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKS 334 (406)
T ss_dssp TTCH-HHHHHG-----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred hhcc-cccccc-----ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEecc
Confidence 111 111122 13777774322 1 256788889999999998643
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.68 E-value=0.1 Score=38.30 Aligned_cols=98 Identities=12% Similarity=0.111 Sum_probs=64.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChH--hH-HHHHHHcCCCeeeecCCH--HHHHHH------------
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQ--KV-DLLKNKLGFDEAFNYNDE--TDLVAA------------ 219 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~--~~-~~~~~~~g~~~vi~~~~~--~~~~~~------------ 219 (347)
++|.|+|++|++|..++.+.+.. .++|++.+-... .+ +.+. +|....++-.++. ..+...
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~-~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~ 80 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL-EFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS 80 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH-HHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH-HHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence 47899999999999999999988 457766554332 33 2334 7787665544432 011111
Q ss_pred ----HHHHCCC-CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEc
Q 019012 220 ----LKRCFPQ-GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 220 ----i~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 257 (347)
+.++... .+|+|+.+..+ ..+...+.+++.+=++....
T Consensus 81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLAN 124 (151)
T d1q0qa2 81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLAN 124 (151)
T ss_dssp SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECC
T ss_pred ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEEc
Confidence 2222222 68999999876 67888888888887766553
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.64 E-value=0.054 Score=41.78 Aligned_cols=40 Identities=25% Similarity=0.209 Sum_probs=35.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
++|.|.|+ |.+|...++++...|++|++.+.+++.++.++
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~ 44 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK 44 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence 58999997 99999999999999999999999998766554
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.60 E-value=0.0054 Score=49.41 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=33.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~ 194 (347)
++++||+||++++|++.++.+...|++|+++++++++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 3689999999999999999999999999999987653
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=95.59 E-value=0.0045 Score=52.94 Aligned_cols=78 Identities=21% Similarity=0.297 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc----CCCe-eeecCCHHHHHHHHHHHCCCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL----GFDE-AFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~----g~~~-vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
.+++|||+||+|-+|...++.+...|.+|++++++..+...+.+.. +... ..|-++...+.+.++. ..+|++
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~---~~~~~v 83 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE---FQPEIV 83 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh---chhhhh
Confidence 4789999999999999999999999999999998765322221022 2221 2344444123333332 157899
Q ss_pred EeCCCh
Q 019012 232 FDNVGG 237 (347)
Q Consensus 232 id~~g~ 237 (347)
+.+++.
T Consensus 84 ~~~aa~ 89 (356)
T d1rkxa_ 84 FHMAAQ 89 (356)
T ss_dssp EECCSC
T ss_pred hhhhcc
Confidence 988863
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.59 E-value=0.12 Score=43.43 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=69.4
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH----------HcCCC----eee--ec
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN----------KLGFD----EAF--NY 210 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~----------~~g~~----~vi--~~ 210 (347)
-+.+..+++++++||=+| .|.|..++++|+..++ ++++++.++...+.+++ .+|.. .++ |.
T Consensus 142 ~~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~ 219 (328)
T d1nw3a_ 142 QMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 219 (328)
T ss_dssp HHHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred HHHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence 344678899999999999 6789999999999998 89999999977666542 12221 122 22
Q ss_pred CCHHHHHHHHHHHCCCCccEEEeCCC--h----hhHHHHHHhhhcCCeEEEEcc
Q 019012 211 NDETDLVAALKRCFPQGIDIYFDNVG--G----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 211 ~~~~~~~~~i~~~~~g~~d~vid~~g--~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+. ++.+.+.. +|+++-..- . ..+.+.++.|++||++|+.-.
T Consensus 220 ~~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~~ 267 (328)
T d1nw3a_ 220 LSE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP 267 (328)
T ss_dssp TSH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred ccc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEecc
Confidence 232 33333332 678774322 1 246677888999999998653
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.48 E-value=0.0078 Score=48.11 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCC---CeeeecCCHHHHHHHHHHHCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGF---DEAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~ 225 (347)
....++||++||=+|+ +.|..+..+++..|- +|++++.++...+.+++.... ...+..+.. ...... ...
T Consensus 67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~--~~~~~~-~~~ 141 (227)
T d1g8aa_ 67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT--KPEEYR-ALV 141 (227)
T ss_dssp CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT--CGGGGT-TTC
T ss_pred cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECC--Cccccc-ccc
Confidence 4467899999999995 457788889998864 899999999988877633221 112212111 000111 111
Q ss_pred CCccEEEeCCCh-----hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFDNVGG-----EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g 257 (347)
..+|+++..... ..+.++.+.|+++|+++..-
T Consensus 142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 178 (227)
T d1g8aa_ 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence 368888765442 25788889999999988753
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.47 E-value=0.059 Score=43.16 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=64.5
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-eeeecCCHHHHHHHHHHHC
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-EAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~ 224 (347)
+.......++++||=.|+ | .|..+..+++ .|++|++++.|++-.+.+++.+ +.. .++..+ +.++.
T Consensus 33 ~~~~~~~~~~~~iLDiGc-G-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--------~~~l~ 101 (251)
T d1wzna1 33 IFKEDAKREVRRVLDLAC-G-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--------VLEIA 101 (251)
T ss_dssp HHHHTCSSCCCEEEEETC-T-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--------GGGCC
T ss_pred HHHHhcCCCCCEEEEeCC-C-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehh--------hhhcc
Confidence 334456677889999995 4 4788888777 5899999999998877777332 321 222222 12222
Q ss_pred C-CCccEEEeCCCh----------hhHHHHHHhhhcCCeEEE
Q 019012 225 P-QGIDIYFDNVGG----------EMLDAALLNMRDHGRIAV 255 (347)
Q Consensus 225 ~-g~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~ 255 (347)
. +.||+|+-..+. ..++++.++|+++|+++.
T Consensus 102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 2 379998865331 256788889999999876
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.42 E-value=0.096 Score=39.21 Aligned_cols=88 Identities=13% Similarity=0.120 Sum_probs=58.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCC-CeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGF-DEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|+|.|. |.+|...+..++..|. +|++.+++++..+.++ +.+. +........ ......|+++-|+.
T Consensus 3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~---------~~~~~~dlIila~p 71 (171)
T d2g5ca2 3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK---------VEDFSPDFVMLSSP 71 (171)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG---------GGGTCCSEEEECSC
T ss_pred EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhh---------hhccccccccccCC
Confidence 6899995 9999999988888885 8999999999999999 7775 333322110 00114677777776
Q ss_pred hh----hHHHHHHhhhcCCeEEEEcc
Q 019012 237 GE----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. .+......+.++..++.++.
T Consensus 72 ~~~~~~vl~~l~~~~~~~~ii~d~~s 97 (171)
T d2g5ca2 72 VRTFREIAKKLSYILSEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred chhhhhhhhhhhcccccccccccccc
Confidence 43 23344444555555555554
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.40 E-value=0.03 Score=42.95 Aligned_cols=88 Identities=26% Similarity=0.244 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
..+.++.|.|. |.+|...+++++.+|.+|++.++...+ +... ..+.. .. ++.+.+++ .|+|.-+.
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~-~~~~-~~~~~-~~------~l~ell~~-----sDiv~~~~ 106 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-QLGIE-LL------SLDDLLAR-----ADFISVHL 106 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-HHTCE-EC------CHHHHHHH-----CSEEEECC
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh-hHHh-hcCce-ec------cHHHHHhh-----CCEEEEcC
Confidence 45789999995 999999999999999999999876554 3333 34432 11 34444554 78888776
Q ss_pred Ch--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. + .-...++.|+++..+|.++-
T Consensus 107 Plt~~T~~lin~~~l~~mk~~a~lIN~sR 135 (184)
T d1ygya1 107 PKTPETAGLIDKEALAKTKPGVIIVNAAR 135 (184)
T ss_dssp CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence 52 1 23577888888888887764
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.39 E-value=0.02 Score=44.60 Aligned_cols=69 Identities=25% Similarity=0.328 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.+|+|.| .|.+|..+++++...|++|++++.+..+..... .+|.. .+...+ +..-.+|+++=|.
T Consensus 25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~-~~~~~~----------~~~~~~DI~iPcA 91 (201)
T d1c1da1 25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHT-AVALED----------VLSTPCDVFAPCA 91 (201)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGGG----------GGGCCCSEEEECS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhccc-ccCccc----------cccccceeeeccc
Confidence 4789999999 599999999999999999999999999888888 78764 232221 1112577777665
Q ss_pred Ch
Q 019012 236 GG 237 (347)
Q Consensus 236 g~ 237 (347)
.+
T Consensus 92 ~~ 93 (201)
T d1c1da1 92 MG 93 (201)
T ss_dssp CS
T ss_pred cc
Confidence 43
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.37 E-value=0.13 Score=39.24 Aligned_cols=40 Identities=13% Similarity=0.071 Sum_probs=34.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
++|.|.|+ |.+|...+.++-..|.+|++.+.+++..+.+.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~ 44 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL 44 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence 57899997 99999888888888999999999988766554
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=95.35 E-value=0.02 Score=48.09 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=47.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECC--h---HhHHHHHHHcCCCee--eecCCHHHHHHHHHHHCCCCccEEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS--S---QKVDLLKNKLGFDEA--FNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~--~---~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+|||+||+|-+|...+..+...|.+|+++++- . ++...+. ..+--+. .|-.+.+++.+.++.. .+|+||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~---~~d~Vi 77 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc---CCceEE
Confidence 69999999999999999888889999998631 1 2223333 3322122 3444432344444321 589999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
.+.+
T Consensus 78 h~aa 81 (338)
T d1orra_ 78 HLAG 81 (338)
T ss_dssp ECCC
T ss_pred eecc
Confidence 9886
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.28 E-value=0.018 Score=44.32 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=37.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~ 202 (347)
+|.|+||+|++|.+.++.+...|++|++.++++++.+.+.+++
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i 44 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5788877899999999999999999999999998877765343
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.24 E-value=0.028 Score=43.51 Aligned_cols=89 Identities=22% Similarity=0.176 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|.++.|+|. |.+|...+++++.+|++|++.++.... +... ..+.... . ++.+.+++ .|++.-+.
T Consensus 47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~-~~~~~~~----~--~l~~ll~~-----sD~i~~~~ 112 (193)
T d1mx3a1 47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQRV----S--TLQDLLFH-----SDCVTLHC 112 (193)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEEC----S--SHHHHHHH-----CSEEEECC
T ss_pred eeCceEEEecc-ccccccceeeeeccccceeeccCcccc-cchh-hhccccc----c--chhhcccc-----CCEEEEee
Confidence 46789999995 999999999999999999999876543 2222 3444221 1 34444554 78887766
Q ss_pred Ch--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.. + .-...++.|+++..++.++-
T Consensus 113 plt~~T~~li~~~~l~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR 141 (193)
T ss_dssp CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred cccccchhhhhHHHHhccCCCCeEEecCC
Confidence 52 1 23466778888888887754
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.16 E-value=0.071 Score=44.85 Aligned_cols=37 Identities=5% Similarity=0.045 Sum_probs=31.2
Q ss_pred CCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEECChHh
Q 019012 158 GEYVFVSAA--SGAVGQLVGQLAKLHGCYVVGSAGSSQK 194 (347)
Q Consensus 158 ~~~vLI~Ga--~g~~G~~ai~la~~~G~~V~~~~~~~~~ 194 (347)
++..||+|+ +.++|++.++.+-..|++|+.+.++...
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~ 40 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY 40 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhh
Confidence 567899994 4699999999999999999998876653
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.11 E-value=0.041 Score=39.37 Aligned_cols=72 Identities=18% Similarity=0.115 Sum_probs=47.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEM 239 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 239 (347)
+|.|+|++|-+|++..+++...|.+++........ . .+ ..+|+++|++..+.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~----~-~~-----------------------~~~DVvIDFS~p~~ 53 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----E-EL-----------------------DSPDVVIDFSSPEA 53 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----E-EC-----------------------SCCSEEEECSCGGG
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH----H-Hh-----------------------ccCCEEEEecCHHH
Confidence 58999999999999999999989877654321110 0 10 13677777777766
Q ss_pred HHHHHHhhhcCCeEEEEccc
Q 019012 240 LDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 240 ~~~~~~~l~~~G~~v~~g~~ 259 (347)
....++.....+.=+.+|.+
T Consensus 54 ~~~~l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 54 LPKTVDLCKKYRAGLVLGTT 73 (128)
T ss_dssp HHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEEcC
Confidence 66666655555555556654
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=95.09 E-value=0.012 Score=47.83 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=31.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
+.|||+||++++|++.++.+...|++|++++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 46899999999999999999999999999998654
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.05 E-value=0.04 Score=43.25 Aligned_cols=93 Identities=17% Similarity=0.088 Sum_probs=61.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
++++.+||=+|+ |.|..+..+++ .|.+|++++.|++..+.+++. .+.. ..+..... + + ....+.||+
T Consensus 35 l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~----l-~~~~~~fD~ 105 (226)
T d1ve3a1 35 MKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-K----L-SFEDKTFDY 105 (226)
T ss_dssp CCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-S----C-CSCTTCEEE
T ss_pred cCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-c----c-cccCcCceE
Confidence 578899999995 45777888886 488999999999888777632 2321 22222111 1 0 011237999
Q ss_pred EEeCCC-----h-h---hHHHHHHhhhcCCeEEEE
Q 019012 231 YFDNVG-----G-E---MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 231 vid~~g-----~-~---~~~~~~~~l~~~G~~v~~ 256 (347)
|+-... . + .++.+.+.|+|||+++..
T Consensus 106 I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~ 140 (226)
T d1ve3a1 106 VIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 140 (226)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence 875433 1 1 577888999999998764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=95.03 E-value=0.076 Score=44.69 Aligned_cols=74 Identities=16% Similarity=0.128 Sum_probs=47.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECC----hHhHHHHHH--HcCCCe-eeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS----SQKVDLLKN--KLGFDE-AFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~----~~~~~~~~~--~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+|||+||+|-+|...+..+...|.+|+++++. ........+ .-++.. ..|-.+.+.+.+.++. .++|+||
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~Vi 78 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD---HAIDTVI 78 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEEE
Confidence 59999999999999999998899999998752 222222220 223322 1344444244444443 2689999
Q ss_pred eCCC
Q 019012 233 DNVG 236 (347)
Q Consensus 233 d~~g 236 (347)
.+++
T Consensus 79 HlAa 82 (338)
T d1udca_ 79 HFAG 82 (338)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9875
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.92 E-value=0.19 Score=37.72 Aligned_cols=99 Identities=16% Similarity=0.118 Sum_probs=62.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEEC-C-hHhHHHHHHHcCCCeeeecCCH-HHHHH-------HHHHHCCCCc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG-CYVVGSAG-S-SQKVDLLKNKLGFDEAFNYNDE-TDLVA-------ALKRCFPQGI 228 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~-~-~~~~~~~~~~~g~~~vi~~~~~-~~~~~-------~i~~~~~g~~ 228 (347)
+|.|.| .|.+|+..+..+.... .+++++.. + ......+. +.+.+......+. ..+.. .+.... .++
T Consensus 4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 80 (172)
T d2czca2 4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL-EKV 80 (172)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH-TTC
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeecccccceeeecccCccccchhhhhh-ccC
Confidence 688999 5999999888886654 47776653 2 23445555 6665432211110 01111 011111 269
Q ss_pred cEEEeCCCh-hhHHHHHHhhhcCCeEEEEccccc
Q 019012 229 DIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVSL 261 (347)
Q Consensus 229 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 261 (347)
|+|+||+|. ...+.+...+..|-+.|..+.+..
T Consensus 81 DvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~ 114 (172)
T d2czca2 81 DIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA 114 (172)
T ss_dssp SEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred CEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence 999999996 567778888999999998887544
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.89 E-value=0.048 Score=42.02 Aligned_cols=89 Identities=10% Similarity=0.006 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.++.|+|. |.+|...+++++..|.+|+..++......... ..+.. ... ++.+.+++ .|+|.-+..
T Consensus 46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~---~~~---~l~~ll~~-----sD~v~l~~p 112 (191)
T d1gdha1 46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQAT---FHD---SLDSLLSV-----SQFFSLNAP 112 (191)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCE---ECS---SHHHHHHH-----CSEEEECCC
T ss_pred cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-ccccc---ccC---CHHHHHhh-----CCeEEecCC
Confidence 4789999995 99999999999999999999987554333333 22221 111 34445554 788887665
Q ss_pred h--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 237 G--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
- + .-...++.|+++..+|.++-
T Consensus 113 lt~~T~~li~~~~l~~mk~~a~lIN~sR 140 (191)
T d1gdha1 113 STPETRYFFNKATIKSLPQGAIVVNTAR 140 (191)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CCchHhheecHHHhhCcCCccEEEecCC
Confidence 2 1 23577888888888887764
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.85 E-value=0.017 Score=45.37 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=64.4
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHH---cCCCeeeecCCHHHHHHHHHHHCCCC
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNK---LGFDEAFNYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~---~g~~~vi~~~~~~~~~~~i~~~~~g~ 227 (347)
...++||++||=.|+ +.|..+..+++..+. +|++++.++...+.+++. .+-...+..+.. +. ... ......
T Consensus 51 ~l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~-~~~~~~ 125 (209)
T d1nt2a_ 51 RLKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KP-WKY-SGIVEK 125 (209)
T ss_dssp CCCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CG-GGT-TTTCCC
T ss_pred cCCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Cc-ccc-ccccce
Confidence 357899999999996 345677778887754 999999999887776532 222112211111 00 000 011125
Q ss_pred ccEEEeCCCh-----hhHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFDNVGG-----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+|+++..... ..+.++.+.|+++|+++.+..
T Consensus 126 vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 161 (209)
T d1nt2a_ 126 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVK 161 (209)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEecccChhhHHHHHHHHHHHhccCCeEEEEEE
Confidence 7877765432 257888899999999987643
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.75 E-value=0.005 Score=49.44 Aligned_cols=74 Identities=22% Similarity=0.254 Sum_probs=46.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.+|||+||+|-+|...++.+...|. +|+++++++.+...-. .-... ...|..+. +.+.+.. .++|+++.|
T Consensus 14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~-~~~d~vi~~ 87 (232)
T d2bkaa1 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAF-QGHDVGFCC 87 (232)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGG-SSCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----ccccccc-ccccccccc
Confidence 46899999999999999998877775 8999998654322111 11121 12333321 1122222 258999999
Q ss_pred CCh
Q 019012 235 VGG 237 (347)
Q Consensus 235 ~g~ 237 (347)
+|.
T Consensus 88 ~~~ 90 (232)
T d2bkaa1 88 LGT 90 (232)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=94.67 E-value=0.053 Score=44.09 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=29.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
+|||+||+|-+|...+..++..|.+|++++++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~ 34 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence 58999999999999999999999999999865
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=94.65 E-value=0.056 Score=44.10 Aligned_cols=96 Identities=8% Similarity=-0.033 Sum_probs=66.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
..++.+||=+|+ +.|..+..+++.. +.+++.++.++...+.+++...-...+..+.. ++ .+.++.||+|+.
T Consensus 82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~ 153 (268)
T d1p91a_ 82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR 153 (268)
T ss_dssp CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence 467789998884 5677777788776 67999999999988888833322222222211 10 011237999997
Q ss_pred CCChhhHHHHHHhhhcCCeEEEEcc
Q 019012 234 NVGGEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.-.-..+++..+.|+|+|+++....
T Consensus 154 ~~~~~~~~e~~rvLkpgG~l~~~~p 178 (268)
T d1p91a_ 154 IYAPCKAEELARVVKPGGWVITATP 178 (268)
T ss_dssp ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHhCCCcEEEEEee
Confidence 6665678999999999999988753
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=94.63 E-value=0.23 Score=36.61 Aligned_cols=91 Identities=16% Similarity=0.215 Sum_probs=54.4
Q ss_pred CEEEEEcCCchHHH-HHHHHHHHCCC-EEEEEEC-Ch--HhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC-CCCccEEE
Q 019012 159 EYVFVSAASGAVGQ-LVGQLAKLHGC-YVVGSAG-SS--QKVDLLKNKLGFDEAFNYNDETDLVAALKRCF-PQGIDIYF 232 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~-~ai~la~~~G~-~V~~~~~-~~--~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~-~g~~d~vi 232 (347)
=++.|.| +|.+|. ..+++++.... +++++++ +. ....+++ ++|.... +. .+ +.+.+.. ..++|+||
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~--~~---~~-d~l~~~~~~~~iDiVf 76 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--YA---GV-EGLIKLPEFADIDFVF 76 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--SS---HH-HHHHHSGGGGGEEEEE
T ss_pred cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCccc--cc---ce-eeeeecccccccCEEE
Confidence 3689999 699986 46778877754 8877764 32 3346677 8886432 11 22 2222222 13699999
Q ss_pred eCCCh-hhHHHH--HHhhhcCCeEEEEc
Q 019012 233 DNVGG-EMLDAA--LLNMRDHGRIAVCG 257 (347)
Q Consensus 233 d~~g~-~~~~~~--~~~l~~~G~~v~~g 257 (347)
+++.. .+.... .+.++.|-+++...
T Consensus 77 ~ATpag~h~~~~~~~~aa~~G~~VID~s 104 (157)
T d1nvmb1 77 DATSASAHVQNEALLRQAKPGIRLIDLT 104 (157)
T ss_dssp ECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence 99874 455544 44454455555444
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.62 E-value=0.03 Score=44.66 Aligned_cols=103 Identities=11% Similarity=0.080 Sum_probs=64.7
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC---CeeeecCCHHHHHHHHHHHCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF---DEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~---~~vi~~~~~~~~~~~i~~~~~g 226 (347)
+...++||++||=+|+ +.|..+..+++... .+|++++.++...+.+++.... ...+..... .. ...... ..
T Consensus 68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~~~-~~ 142 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KP-QEYANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CG-GGGTTT-CC
T ss_pred HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cC-cccccc-cc
Confidence 4567899999999996 45677777887653 4999999999888877732111 112221111 10 011111 11
Q ss_pred CccEEEeCCCh-----hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVGG-----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+|+++..... ..+.++.+.|+++|+++..-.
T Consensus 143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k 179 (230)
T d1g8sa_ 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIK 179 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEeeccccchHHHHHHHHHHHHhcccCceEEEEee
Confidence 46667665542 257788889999999887643
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=94.56 E-value=0.076 Score=40.94 Aligned_cols=92 Identities=14% Similarity=0.082 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCee-eecCCHHHHHHHHHHHC-CCCccEE
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDEA-FNYNDETDLVAALKRCF-PQGIDIY 231 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~v-i~~~~~~~~~~~i~~~~-~g~~d~v 231 (347)
++.+||=+|+ +.|..+..+++ .|++|++++.+++..+.+++ ..++..+ +...+ +.+.. .+.||+|
T Consensus 30 ~~grvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d-------~~~~~~~~~fD~I 99 (198)
T d2i6ga1 30 APGRTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD-------LNTLTFDGEYDFI 99 (198)
T ss_dssp CSCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC-------TTTCCCCCCEEEE
T ss_pred CCCcEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhhee-------cccccccccccEE
Confidence 3448999994 48888888876 48999999999987776652 3344321 11111 11111 2379999
Q ss_pred EeCCCh---------hhHHHHHHhhhcCCeEEEEcc
Q 019012 232 FDNVGG---------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 232 id~~g~---------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+....- ..++.+.++|+++|+++....
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 135 (198)
T d2i6ga1 100 LSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA 135 (198)
T ss_dssp EEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 863321 256778888999999887654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=94.50 E-value=0.32 Score=35.49 Aligned_cols=95 Identities=7% Similarity=-0.037 Sum_probs=59.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhH-HHHHH--HcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKN--KLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~-~~~~~--~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
-+.++|.|+ |.+|...++.+...|.+|++++.++++. +.+.+ ..|. .++..+. .-.+.+++..-..++.++-+
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~-~vi~Gd~--~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDS--NDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCT--TSHHHHHHHTTTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCc-EEEEccC--cchHHHHHhccccCCEEEEc
Confidence 356899996 9999999999999999999998876542 23331 2344 3443332 11234555444578999998
Q ss_pred CChh--hH--HHHHHhhhcCCeEEEE
Q 019012 235 VGGE--ML--DAALLNMRDHGRIAVC 256 (347)
Q Consensus 235 ~g~~--~~--~~~~~~l~~~G~~v~~ 256 (347)
++.+ .. ....+.+.+.-+++..
T Consensus 79 ~~~d~~n~~~~~~~r~~~~~~~iia~ 104 (153)
T d1id1a_ 79 SDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred cccHHHHHHHHHHHHHhCCCCceEEE
Confidence 8864 22 2333445555555544
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.39 E-value=0.044 Score=46.02 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=30.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
+++||+||+|-+|...+..+...|.+|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 579999999999999999999899999999974
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.38 E-value=0.055 Score=41.07 Aligned_cols=50 Identities=12% Similarity=0.155 Sum_probs=37.4
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 148 GFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 148 al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
+|.+...--++++|||+|+ |+++.+++..+...| +|+++.|+.++.+.+.
T Consensus 8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~ 57 (177)
T d1nvta1 8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALA 57 (177)
T ss_dssp HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHH
T ss_pred HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHH
Confidence 3333333357889999996 999998877765555 9999999988877654
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=94.37 E-value=0.37 Score=36.29 Aligned_cols=139 Identities=11% Similarity=0.014 Sum_probs=78.2
Q ss_pred EEEEEcCCchHHHH-HHHHHHHC-C-CEEEEE-ECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 160 YVFVSAASGAVGQL-VGQLAKLH-G-CYVVGS-AGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~-ai~la~~~-G-~~V~~~-~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
++.|.|. |.+|.- .+...+.. + ++++++ ++++++.+.+.++++...+. . ++.+.+. ...+|+|+-|+
T Consensus 5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~---~~~ell~---~~~id~v~I~t 75 (181)
T d1zh8a1 5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--D---SYEELLE---SGLVDAVDLTL 75 (181)
T ss_dssp EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--S---CHHHHHH---SSCCSEEEECC
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--e---eeecccc---ccccceeeccc
Confidence 5789995 999964 46666654 3 477755 45566666655477765443 2 3333333 23699999988
Q ss_pred Chh-hHHHHHHhhhcCCeEEEEcccccccCCCCCCc-cchHHHhh-cceEe-eccccccccchhHHHHHHHHHHHHCCce
Q 019012 236 GGE-MLDAALLNMRDHGRIAVCGMVSLHSYHDPQGI-HNLFTLVT-KRITM-KGFLQSDYLHLYPRFLDYVISNYKQGKI 311 (347)
Q Consensus 236 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~g~i 311 (347)
... +.+.+..++..+ +-|.+..+... .... .....+.. ++..+ .++... ...+...++++.+++.+|.+
T Consensus 76 p~~~h~~~~~~al~~g-k~V~~EKPl~~----~~~e~~~l~~~~~~~~~~~~v~~~~R--~~~~~~~~~~~~~~i~~G~i 148 (181)
T d1zh8a1 76 PVELNLPFIEKALRKG-VHVICEKPIST----DVETGKKVVELSEKSEKTVYIAENFR--ENSYQKEFEDFYQVVAEGKP 148 (181)
T ss_dssp CGGGHHHHHHHHHHTT-CEEEEESSSSS----SHHHHHHHHHHHHHCSSCEEEECGGG--CCHHHHHHHHHHHHHHSCCC
T ss_pred cccccccccccccccc-hhhhcCCCCcC----CHHHHHHHHHHHHHhCCeEEEEeecc--ccccCHHHHHHHHHHHCCCC
Confidence 864 677777777765 55666554321 1001 11222222 22222 222221 12245668888999999887
Q ss_pred eee
Q 019012 312 VYV 314 (347)
Q Consensus 312 ~~~ 314 (347)
...
T Consensus 149 g~i 151 (181)
T d1zh8a1 149 NDL 151 (181)
T ss_dssp CSS
T ss_pred ccC
Confidence 543
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.29 E-value=0.052 Score=45.65 Aligned_cols=101 Identities=17% Similarity=0.195 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHH--CCCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRC--FPQG 227 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~--~~g~ 227 (347)
.+++|++||=.++ ++|..++.+|+. |+ +|+.++.+++..+.+++ ..|...-+..... +..+.+..+ .++.
T Consensus 142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~ 217 (324)
T d2as0a2 142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK 217 (324)
T ss_dssp GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence 3578999988774 445555555554 76 89999999998888763 2455321111111 333333332 2237
Q ss_pred ccEEEe-C--CCh-------------hhHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYFD-N--VGG-------------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vid-~--~g~-------------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
||+|+- . .+. +.+..++++|++||.++.+..
T Consensus 218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~ 264 (324)
T d2as0a2 218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 264 (324)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 999974 2 111 145667888999999998764
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=94.20 E-value=0.18 Score=37.53 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=78.7
Q ss_pred EEEEEcCCchHHHH-HHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh
Q 019012 160 YVFVSAASGAVGQL-VGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~-ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~ 237 (347)
+|.|.|+ |.+|.. .+...+.. +.++++++.++++.+.+.++++...+.+.-+ +.+ ...+|+|+-|+..
T Consensus 3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~ll----~~~iD~V~I~tp~ 72 (167)
T d1xeaa1 3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR-----DVL----QYGVDAVMIHAAT 72 (167)
T ss_dssp EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT-----GGG----GGCCSEEEECSCG
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH-----Hhc----ccccceecccccc
Confidence 5789995 999854 55566555 5588888888888777775788754432211 112 1258999999886
Q ss_pred -hhHHHHHHhhhcCCeEEEEcccccccCCCCCCccchHHH-hhcceEe-eccccccccchhHHHHHHHHHHHHCCceeee
Q 019012 238 -EMLDAALLNMRDHGRIAVCGMVSLHSYHDPQGIHNLFTL-VTKRITM-KGFLQSDYLHLYPRFLDYVISNYKQGKIVYV 314 (347)
Q Consensus 238 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~ 314 (347)
.+.+.+..++..+ +-|.+..+...+. ......... -.++..+ .++. .+...+.++.+.+..|++...
T Consensus 73 ~~H~~~~~~al~~g-k~V~~EKP~~~~~---~e~~~l~~~a~~~~~~~~vg~~------r~~~~~~~~~~~~~~G~ig~~ 142 (167)
T d1xeaa1 73 DVHSTLAAFFLHLG-IPTFVDKPLAASA---QECENLYELAEKHHQPLYVGFN------GFDAMVQDWLQVAAAGKLPTH 142 (167)
T ss_dssp GGHHHHHHHHHHTT-CCEEEESCSCSSH---HHHHHHHHHHHHTTCCEEEECG------THHHHHHHHHHHHHHTCCCHH
T ss_pred cccccccccccccc-cccccCCCCcCCH---HHHHHHHHHHHHcCCEEEEEeC------cCCHHHHHHHHHhhcCCCCcE
Confidence 4777888888865 4455654332110 001111222 2223222 2221 224557788888888887643
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=94.19 E-value=0.08 Score=42.73 Aligned_cols=101 Identities=8% Similarity=0.004 Sum_probs=68.0
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHC--CCCc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCF--PQGI 228 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~--~g~~ 228 (347)
......++.+||=.| .++|..+..++.....+|++++.+++-.+.+++.+.....+++... + +.++. .+.|
T Consensus 87 ~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d----~~~~~~~~~~f 159 (254)
T d1xtpa_ 87 ASLPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-S----METATLPPNTY 159 (254)
T ss_dssp HTSTTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-C----GGGCCCCSSCE
T ss_pred hhCCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-c----ccccccCCCcc
Confidence 334456778999998 4678888888877677999999999988988855543222332211 1 22222 2379
Q ss_pred cEEEeCCCh---------hhHHHHHHhhhcCCeEEEEcc
Q 019012 229 DIYFDNVGG---------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 229 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+|+-.-.- ..++.+.+.|+++|.++....
T Consensus 160 D~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~ 198 (254)
T d1xtpa_ 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence 999764331 146788889999999987643
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=94.13 E-value=0.16 Score=37.58 Aligned_cols=86 Identities=10% Similarity=0.052 Sum_probs=57.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-h
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG-E 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~-~ 238 (347)
+|-|+| .|.+|...+.-+...|.+|++.++++++.+.+. +.++. +.+ +..+.+++ .|++|-|+.. +
T Consensus 2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~-~~~-----~~~e~~~~-----~d~ii~~v~~~~ 68 (161)
T d1vpda2 2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAE-TAS-----TAKAIAEQ-----CDVIITMLPNSP 68 (161)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECS-----SHHHHHHH-----CSEEEECCSSHH
T ss_pred EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhh-hcc-----cHHHHHhC-----CCeEEEEcCCHH
Confidence 477888 599999988888888999999999999999888 77763 221 22223332 7788888764 3
Q ss_pred hHHH-------HHHhhhcCCeEEEEcc
Q 019012 239 MLDA-------ALLNMRDHGRIAVCGM 258 (347)
Q Consensus 239 ~~~~-------~~~~l~~~G~~v~~g~ 258 (347)
..+. ....+.++-.++..+.
T Consensus 69 ~v~~v~~~~~~~~~~~~~g~iiid~sT 95 (161)
T d1vpda2 69 HVKEVALGENGIIEGAKPGTVLIDMSS 95 (161)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred HHHHHHhCCcchhhccCCCCEEEECCC
Confidence 3332 3334455556665544
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.12 E-value=0.1 Score=43.00 Aligned_cols=96 Identities=18% Similarity=0.130 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcC--------CC-eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLG--------FD-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g--------~~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
...++|||+| |+-|..+-.+++..+. +|++++.+++=.+.+++-+. .. .++.. +..+.+++...
T Consensus 79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~----Da~~~l~~~~~ 152 (290)
T d1xj5a_ 79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAFLKNAAE 152 (290)
T ss_dssp SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHHHHTSCT
T ss_pred CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc----cHHHHHhhccc
Confidence 4557999999 4456666777887776 89999999987777772221 11 12222 34455655544
Q ss_pred CCccEEE-eCCCh----------hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYF-DNVGG----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g 257 (347)
+.+|++| |+... +.++.+.++|+++|.++.-.
T Consensus 153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~ 195 (290)
T d1xj5a_ 153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 195 (290)
T ss_dssp TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence 5899776 44431 25788899999999998754
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.10 E-value=0.21 Score=42.79 Aligned_cols=33 Identities=18% Similarity=0.101 Sum_probs=29.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
|.+|||+||+|-+|..++..+...|.+|++++.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDn 33 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 33 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEec
Confidence 678999999999999999999999999999973
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=94.08 E-value=0.093 Score=43.09 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=31.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
-.+|||+||+|-+|...+..+...|.+|++++++.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 37 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 37 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 45699999999999999998888999999998864
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.07 E-value=0.056 Score=41.52 Aligned_cols=90 Identities=14% Similarity=-0.031 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.+.++.|.|. |.+|...++.++.+|.+|+..++......... ..+.... . ++.+.++ ..|+|.-+.
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~~---~---~l~~~l~-----~sD~v~~~~ 108 (188)
T d2naca1 42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH---A---TREDMYP-----VCDVVTLNC 108 (188)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC---S---SHHHHGG-----GCSEEEECS
T ss_pred ccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-ccccccc---C---CHHHHHH-----hccchhhcc
Confidence 35789999995 99999999999999999999997654444444 4443211 1 2233332 378887665
Q ss_pred Ch-h-----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG-E-----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~-~-----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.- + .-.+.++.|+++..+|.++-
T Consensus 109 plt~~T~~li~~~~l~~mk~ga~lIN~aR 137 (188)
T d2naca1 109 PLHPETEHMINDETLKLFKRGAYIVNTAR 137 (188)
T ss_dssp CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred cccccchhhhHHHHHHhCCCCCEEEecCc
Confidence 52 1 23567778888877777653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.05 E-value=0.13 Score=37.69 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=54.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC--CccEEEeCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ--GIDIYFDNVG 236 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g--~~d~vid~~g 236 (347)
++|.|+||.|.+|...+..++..|.+|.+.+++........ ..+++.++...........+.+..+. .=.+++|+++
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S 88 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS 88 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence 58999997899999999999999999999999877655554 55666555544432333344444332 1247888876
Q ss_pred h
Q 019012 237 G 237 (347)
Q Consensus 237 ~ 237 (347)
.
T Consensus 89 v 89 (152)
T d2pv7a2 89 V 89 (152)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=94.04 E-value=0.032 Score=47.58 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=29.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+.|||+||+|-+|...+..+...|.+|+++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 5789999999999999999988899999999843
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.04 E-value=0.13 Score=39.42 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=64.0
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC----eeeecCCHHHHHHHHH
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD----EAFNYNDETDLVAALK 221 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~----~vi~~~~~~~~~~~i~ 221 (347)
|.+.....++++||=.| .+.|..++.+++ .+.+|++++.++...+.+++ ..+.. .++..+ +. .
T Consensus 44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d----~~---~ 113 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD----LY---E 113 (194)
T ss_dssp HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS----TT---T
T ss_pred HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcc----hh---h
Confidence 34556788999999998 455666777765 46799999999988777763 22332 122221 11 1
Q ss_pred HHCCCCccEEEeCC----Chh----hHHHHHHhhhcCCeEEEE
Q 019012 222 RCFPQGIDIYFDNV----GGE----MLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 222 ~~~~g~~d~vid~~----g~~----~~~~~~~~l~~~G~~v~~ 256 (347)
...++.||+|+-.. +.+ .++.+.+.|+++|+++..
T Consensus 114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 156 (194)
T d1dusa_ 114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence 12234799998632 222 467788899999998654
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.03 E-value=0.017 Score=43.38 Aligned_cols=87 Identities=21% Similarity=0.135 Sum_probs=56.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC-----eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD-----EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+|+|+|+ |.+|.+....+...|.+|..+++++++.+..+ ..+.. ..+..... +.+. .+|++|-+
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~-----~~D~iii~ 70 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTANDP----DFLA-----TSDLLLVT 70 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESCH----HHHH-----TCSEEEEC
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccchh----hhhc-----ccceEEEe
Confidence 6899997 99998888888888999999999876544333 33321 11222221 1222 49999999
Q ss_pred CChhhHHHHHHhh----hcCCeEEEEc
Q 019012 235 VGGEMLDAALLNM----RDHGRIAVCG 257 (347)
Q Consensus 235 ~g~~~~~~~~~~l----~~~G~~v~~g 257 (347)
+-....+.+++.+ .++..++.+.
T Consensus 71 vka~~~~~~~~~l~~~~~~~~~Iv~~q 97 (167)
T d1ks9a2 71 LKAWQVSDAVKSLASTLPVTTPILLIH 97 (167)
T ss_dssp SCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred ecccchHHHHHhhccccCcccEEeecc
Confidence 9876555555444 4456666654
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.98 E-value=0.047 Score=44.37 Aligned_cols=95 Identities=19% Similarity=0.152 Sum_probs=63.7
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCCC-
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFPQ- 226 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~g- 226 (347)
.+++|++||-.++ ++|..++.+|+.-+++|++++.++...+.+++ ..|.. .++..+. +++...
T Consensus 104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~--------~~~~~~~ 173 (260)
T d2frna1 104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN--------RDFPGEN 173 (260)
T ss_dssp HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT--------TTCCCCS
T ss_pred hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch--------HHhccCC
Confidence 3689999999884 55666777787645699999999998887763 23543 2333322 122333
Q ss_pred CccEEE-eCCC--hhhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYF-DNVG--GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vi-d~~g--~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.+|.|+ +-.. .+.+..+++.+++||.+.....
T Consensus 174 ~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~ 208 (260)
T d2frna1 174 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT 208 (260)
T ss_dssp CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence 688665 4322 3578899999999998866543
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=93.92 E-value=0.054 Score=41.33 Aligned_cols=84 Identities=23% Similarity=0.194 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
-.|++|.|+|. |.+|...+++++.+|++|++.+++..+ +.....+ ++.+.++ ..|+++-++
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~~-----~l~ell~-----~sDiv~~~~ 100 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFTN-----SLEEALR-----EARAAVCAL 100 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCBS-----CSHHHHT-----TCSEEEECC
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeeee-----chhhhhh-----ccchhhccc
Confidence 35889999995 999999999999999999999876432 1111111 2222333 378888776
Q ss_pred Ch--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.- + .-...++.|+++..+|.++-
T Consensus 101 pl~~~t~~li~~~~l~~mk~~ailIN~~R 129 (181)
T d1qp8a1 101 PLNKHTRGLVKYQHLALMAEDAVFVNVGR 129 (181)
T ss_dssp CCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred ccccccccccccceeeeccccceEEeccc
Confidence 52 2 23678888999999988764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.87 E-value=0.28 Score=38.61 Aligned_cols=49 Identities=20% Similarity=0.157 Sum_probs=42.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD 205 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~ 205 (347)
-.|.+|+|.| .|.+|..+++++...|++|++++.+..+.+.+.+..|..
T Consensus 37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~ 85 (230)
T d1leha1 37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 85 (230)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence 5789999999 599999999999999999999999988887777566663
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=93.83 E-value=0.058 Score=41.86 Aligned_cols=85 Identities=24% Similarity=0.213 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
.|.+|.|+|. |.+|..++++++.+|++|++.++...+. ....+... ++.+.+++ .|++.-++.
T Consensus 44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~--------~~~~~~~~---~l~~l~~~-----~D~v~~~~p 106 (199)
T d1dxya1 44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKG--------DHPDFDYV---SLEDLFKQ-----SDVIDLHVP 106 (199)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSS--------CCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred cceeeeeeec-ccccccccccccccceeeeccCCccchh--------hhcchhHH---HHHHHHHh-----cccceeeec
Confidence 5689999995 9999999999999999999998754321 11112222 33334443 678877654
Q ss_pred h--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 237 G--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 237 ~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
. + .-...++.|+++..+|.++-
T Consensus 107 lt~~T~~li~~~~l~~mk~~a~lIN~aR 134 (199)
T d1dxya1 107 GIEQNTHIINEAAFNLMKPGAIVINTAR 134 (199)
T ss_dssp CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred ccccccccccHHHhhccCCceEEEeccc
Confidence 2 1 23567888888888887764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.78 E-value=0.086 Score=37.01 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=35.7
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+.....++++++|.|| |.+|+-.++.++.+|.+|+++.+++
T Consensus 15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence 3455678999999997 9999999999999999999999765
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.69 E-value=0.018 Score=48.19 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=29.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
++|||+||+|-+|...+..+...|.+|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57999999999999999988889999999975
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.67 E-value=0.021 Score=47.39 Aligned_cols=96 Identities=14% Similarity=0.027 Sum_probs=60.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc---CCC-----eeeecCCHHHHHHHHHHHCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD-----EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~---g~~-----~vi~~~~~~~~~~~i~~~~~ 225 (347)
+.+++.+||=+| .+.|..++.+++. |++|++++.|++-++.+++.. +.. ..+..- ++...-.....
T Consensus 53 ~~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 126 (292)
T d1xvaa_ 53 RQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVPA 126 (292)
T ss_dssp HHTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSCC
T ss_pred hhcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccCC
Confidence 345678999998 4567788888875 899999999998777776321 211 011111 11111122222
Q ss_pred C-CccEEEeCCCh---------------hhHHHHHHhhhcCCeEEE
Q 019012 226 Q-GIDIYFDNVGG---------------EMLDAALLNMRDHGRIAV 255 (347)
Q Consensus 226 g-~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~ 255 (347)
+ .||.|+..... ..++++.+.|+|||.++.
T Consensus 127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 172 (292)
T d1xvaa_ 127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172 (292)
T ss_dssp TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence 3 79988853221 157889999999999886
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=93.67 E-value=0.079 Score=41.75 Aligned_cols=97 Identities=9% Similarity=0.095 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHH---CCCEEEEEECChHhHHHHHHHc---CCCeeeecCCHHHHHHHHHHHCCCCc
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKL---HGCYVVGSAGSSQKVDLLKNKL---GFDEAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~---~G~~V~~~~~~~~~~~~~~~~~---g~~~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
++++.+||=+|+ |.|..+..+++. -+++|++++.|++-.+.+++.+ +....+..... + ......+.+
T Consensus 37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d----~~~~~~~~~ 109 (225)
T d1im8a_ 37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-D----IRHVEIKNA 109 (225)
T ss_dssp CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-C----TTTCCCCSE
T ss_pred cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-h----hhccccccc
Confidence 688999999994 567777777765 4789999999999888887433 22211111111 1 112222356
Q ss_pred cEEEeCCCh---------hhHHHHHHhhhcCCeEEEEcc
Q 019012 229 DIYFDNVGG---------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 229 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+++-+..- ..+++..+.|+|+|.++....
T Consensus 110 d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~ 148 (225)
T d1im8a_ 110 SMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK 148 (225)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence 666543321 257889999999999998643
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.59 E-value=0.083 Score=40.56 Aligned_cols=81 Identities=15% Similarity=0.121 Sum_probs=56.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC--C----ee----eecCCHHHHHHHHHHHCCCCc
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--D----EA----FNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~--~----~v----i~~~~~~~~~~~i~~~~~g~~ 228 (347)
.+|.|+|+ |..|.+.+.++...|.+|+..+++++..+.++ +-+. . .. +.... ++.+.++ +.
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~--~l~~a~~-----~a 78 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTS--DVEKAYN-----GA 78 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEES--CHHHHHT-----TC
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccch--hhhhccC-----CC
Confidence 46999996 99999988888888889999999999888887 4331 0 00 11111 3333333 48
Q ss_pred cEEEeCCChhhHHHHHHhhh
Q 019012 229 DIYFDNVGGEMLDAALLNMR 248 (347)
Q Consensus 229 d~vid~~g~~~~~~~~~~l~ 248 (347)
|++|-++....++..++.+.
T Consensus 79 d~iiiavPs~~~~~~~~~~~ 98 (189)
T d1n1ea2 79 EIILFVIPTQFLRGFFEKSG 98 (189)
T ss_dssp SCEEECSCHHHHHHHHHHHC
T ss_pred CEEEEcCcHHHHHHHHHHHH
Confidence 99999999877777666543
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=93.50 E-value=0.57 Score=35.18 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=56.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEECCh--HhHHHHHHHcCCCeeeecCCHHHHHH-------HHHHHCCCCcc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSS--QKVDLLKNKLGFDEAFNYNDETDLVA-------ALKRCFPQGID 229 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~--~~~~~~~~~~g~~~vi~~~~~~~~~~-------~i~~~~~g~~d 229 (347)
+|.|.| .|.+|+..++.+.... .+|+++.... .....+. ..+............+.+ .+.+.. .++|
T Consensus 3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-~~vD 79 (178)
T d1b7go1 3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-KTSD 79 (178)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-HHCS
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhhh-hcCC
Confidence 578999 6999999999998774 5888776432 2333333 344322221111100000 000000 1489
Q ss_pred EEEeCCCh-hhHHHHHHhhhcCCeEEEEccc
Q 019012 230 IYFDNVGG-EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 230 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+|+||+|. ...+.+-.++..+-+++..+..
T Consensus 80 iViecTG~f~~~e~a~~hl~~G~KvIi~~~~ 110 (178)
T d1b7go1 80 IVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE 110 (178)
T ss_dssp EEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred EEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence 99999996 4556666777766677776554
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=93.46 E-value=0.057 Score=41.10 Aligned_cols=39 Identities=21% Similarity=0.124 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
....+++|+|.|| |+.|+.|+..+...|.+|++....++
T Consensus 39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 3456789999997 99999999999999999999997654
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.46 E-value=0.088 Score=41.29 Aligned_cols=100 Identities=17% Similarity=0.221 Sum_probs=62.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHH---HcCCCe---eeecCCHHHHHHHHHHHC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKN---KLGFDE---AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~---vi~~~~~~~~~~~i~~~~ 224 (347)
.+..+.++||=+| ++.|..++.+|+++ +.+|+.++.+++..+.+++ ..|... ++..... +..+.+.+..
T Consensus 52 v~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~-e~l~~l~~~~ 128 (214)
T d2cl5a1 52 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQ-DLIPQLKKKY 128 (214)
T ss_dssp HHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH-HHGGGHHHHS
T ss_pred HHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccc-ccccchhhcc
Confidence 3445567999999 66788888999876 5699999999887776652 456532 2222221 3333343333
Q ss_pred C-CCccEEE-eCCChh-----hHHHHHHhhhcCCeEEE
Q 019012 225 P-QGIDIYF-DNVGGE-----MLDAALLNMRDHGRIAV 255 (347)
Q Consensus 225 ~-g~~d~vi-d~~g~~-----~~~~~~~~l~~~G~~v~ 255 (347)
. +.+|++| |+.-.. .+...++.|++||.++.
T Consensus 129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~ 166 (214)
T d2cl5a1 129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA 166 (214)
T ss_dssp CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence 3 3699886 433322 24455667899997654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.43 E-value=0.081 Score=37.07 Aligned_cols=38 Identities=13% Similarity=0.008 Sum_probs=33.3
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
.++..++|+|.|| |.+|.-+++.+..+|.+|+++.+++
T Consensus 18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 4556789999997 9999999999999999999999764
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=93.42 E-value=0.62 Score=34.70 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=59.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEECC--hHhHHHHHHHcCCCeeeecCCH-HHHHH-------HHHHHCCCCc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGS--SQKVDLLKNKLGFDEAFNYNDE-TDLVA-------ALKRCFPQGI 228 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~--~~~~~~~~~~~g~~~vi~~~~~-~~~~~-------~i~~~~~g~~ 228 (347)
+|.|.| .|.+|+.+++.+...+ .+++++... ......+. ..+.+......+. ..+.+ .+.+.. .++
T Consensus 3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v 79 (171)
T d1cf2o1 3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA 79 (171)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence 688998 6999999999887775 477765542 23445555 5565432211111 01110 011111 259
Q ss_pred cEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccc
Q 019012 229 DIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 229 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
|+|+||+|. ...+.+-..+..+-+++..+.+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred CEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 999999996 45667777888887887776543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.37 E-value=0.12 Score=36.44 Aligned_cols=41 Identities=15% Similarity=-0.007 Sum_probs=34.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
....-..+++|+|.|| |.+|+-+++.+..+|.+|+++.+.+
T Consensus 23 ~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 23 QKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp HHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred HHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence 4444456789999997 9999999999999999999998764
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.36 E-value=0.074 Score=37.20 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
..++++|.|| |.+|+-+++.+..+|.+|+++.+.+.
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 3579999997 99999999999999999999997653
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.29 E-value=0.28 Score=41.10 Aligned_cols=74 Identities=22% Similarity=0.223 Sum_probs=46.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh----HhH---HHHHHHcCCC-eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS----QKV---DLLKNKLGFD-EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~----~~~---~~~~~~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
+.|||+||+|-+|...+..+...|.+|+++++.. ... +... .-++. ...|-++.+++...+.. -++|+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~ 77 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKE---YKIDS 77 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHH---SCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhc---cCCCE
Confidence 4799999999999999998888899999986421 111 2222 22332 22344544233333332 16999
Q ss_pred EEeCCC
Q 019012 231 YFDNVG 236 (347)
Q Consensus 231 vid~~g 236 (347)
||.+++
T Consensus 78 VihlAa 83 (347)
T d1z45a2 78 VIHFAG 83 (347)
T ss_dssp EEECCS
T ss_pred EEEccc
Confidence 999876
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.27 E-value=0.037 Score=42.41 Aligned_cols=35 Identities=9% Similarity=-0.009 Sum_probs=31.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChH
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQ 193 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~ 193 (347)
+++|+|.|| |+.|+.++..+..+|+ .|+++.+++.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 578999997 9999999999999999 5989887764
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=93.18 E-value=0.072 Score=36.96 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=32.5
Q ss_pred CCCC-CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 155 PKSG-EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 155 ~~~~-~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
+.++ .+|.|+|| |-+|++.++-|+.+|.++++.+.+++
T Consensus 7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~ 45 (111)
T d1kjqa2 7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD 45 (111)
T ss_dssp TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 3444 46999996 99999999999999999999997765
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.14 E-value=0.039 Score=46.26 Aligned_cols=91 Identities=24% Similarity=0.189 Sum_probs=52.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCCC
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~g 226 (347)
.+.+|++||-+|+ | .|+.++.+|+ .|+ +|++++.++. ...+++ ..+.. .++..+.. ++ ....+
T Consensus 30 ~~~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~~ 99 (316)
T d1oria_ 30 HLFKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPVE 99 (316)
T ss_dssp HHHTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSSS
T ss_pred ccCCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHH-Hc-----ccccc
Confidence 4568999999994 4 4777777666 577 8999998764 233221 33442 22322221 11 01113
Q ss_pred CccEEEeCC-Ch----h-----hHHHHHHhhhcCCeEE
Q 019012 227 GIDIYFDNV-GG----E-----MLDAALLNMRDHGRIA 254 (347)
Q Consensus 227 ~~d~vid~~-g~----~-----~~~~~~~~l~~~G~~v 254 (347)
.+|+++... +. + .+...-+.|+++|+++
T Consensus 100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii 137 (316)
T d1oria_ 100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 137 (316)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence 789987532 21 1 2344557899999875
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=93.02 E-value=1.6 Score=35.35 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---ChHhHHHHHHHcCCCeeeecCCH--------------
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---SSQKVDLLKNKLGFDEAFNYNDE-------------- 213 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~~~~-------------- 213 (347)
+...+.++.+|+... +|..|++++..++.+|.+++++.. ++.+.+.++ .+|+.-++.....
T Consensus 53 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~ 130 (292)
T d2bhsa1 53 KRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMAN 130 (292)
T ss_dssp HTTSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred HhCCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccc
Confidence 445556666655555 699999999999999997655554 456778888 9998533221110
Q ss_pred -------------H-------HHHHHHHHHCCCCccEEEeCCCh-h---hHHHHHHhhhcCCeEEEEcc
Q 019012 214 -------------T-------DLVAALKRCFPQGIDIYFDNVGG-E---MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 214 -------------~-------~~~~~i~~~~~g~~d~vid~~g~-~---~~~~~~~~l~~~G~~v~~g~ 258 (347)
. ....+|.+..++.+|.++-++|+ . .+...++...+..+++-+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep 199 (292)
T d2bhsa1 131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP 199 (292)
T ss_dssp HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence 0 01123333344568999988875 3 34456666677788776654
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.00 E-value=0.16 Score=41.57 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc----CC----C-eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL----GF----D-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~----g~----~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
...++|||+| |+-|..+-.+++..+. +|+++..+++=.+.+++-+ +. . +++.. |....+++ +.
T Consensus 77 ~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~----Da~~~l~~-~~ 149 (285)
T d2o07a1 77 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG----DGFEFMKQ-NQ 149 (285)
T ss_dssp SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHHHT-CS
T ss_pred cCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEc----cHHHHHhc-CC
Confidence 4568999999 4556667777777665 9999999988777776222 11 1 12211 33444554 33
Q ss_pred CCccEEE-eCCCh----------hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYF-DNVGG----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g 257 (347)
+.+|++| |.... +.++.+.+.|+++|.++.-.
T Consensus 150 ~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~ 192 (285)
T d2o07a1 150 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 192 (285)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence 4799987 43321 25788889999999998754
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=92.69 E-value=0.25 Score=40.84 Aligned_cols=99 Identities=15% Similarity=0.142 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC-Ceeeec-----CCHHHHHHHHHHHCCCCc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF-DEAFNY-----NDETDLVAALKRCFPQGI 228 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~-~~vi~~-----~~~~~~~~~i~~~~~g~~ 228 (347)
...++|||+| |+-|..+-.++++... +|+++..+++=.+.+++-+.. ...++. .-. +..+.+++ +...|
T Consensus 105 ~~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~y 180 (312)
T d2b2ca1 105 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF 180 (312)
T ss_dssp SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred CCCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCC
Confidence 4467999999 4556667777887765 899999999888888732321 111110 011 44455654 44589
Q ss_pred cEEEe-CCC----------hhhHHHHHHhhhcCCeEEEEcc
Q 019012 229 DIYFD-NVG----------GEMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 229 d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+||- ... .+.++.+.++|+++|.++.-..
T Consensus 181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~ 221 (312)
T d2b2ca1 181 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 221 (312)
T ss_dssp EEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence 99973 221 1257788899999999988643
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.65 E-value=0.077 Score=44.11 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=47.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH--hHHHHHHHcCCC-----eeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ--KVDLLKNKLGFD-----EAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~--~~~~~~~~~g~~-----~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
++|||+||+|-+|...+..+...|.+|+++++... ..+.++ .++.. .-.|-.+...+...+... ..+++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~~~ 76 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---QPQEV 76 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHHhhhhhccc---ccccc
Confidence 47999999999999999988888999999987542 234444 44432 123444432333333332 35677
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+.+..
T Consensus 77 ~~~a~ 81 (321)
T d1rpna_ 77 YNLAA 81 (321)
T ss_dssp EECCS
T ss_pred ccccc
Confidence 66654
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=92.61 E-value=0.069 Score=42.87 Aligned_cols=35 Identities=14% Similarity=0.069 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
..++|+|.|| |..|++++..+...|.+|++.++++
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3578999997 9999999999999999999998753
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=92.60 E-value=0.14 Score=43.40 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
.+-+|||+||+|-+|...+..+...|.+|+++++...... .. ..... ...|.++. ...++.. .++|.|+.+
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~-~~~~~~~~~~D~~~~---~~~~~~~--~~~d~Vih~ 86 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TE-DMFCDEFHLVDLRVM---ENCLKVT--EGVDHVFNL 86 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CG-GGTCSEEEECCTTSH---HHHHHHH--TTCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hh-hcccCcEEEeechhH---HHHHHHh--hcCCeEeec
Confidence 4668999999999999999999999999999986543211 11 11211 23444432 2222222 258999987
Q ss_pred CC
Q 019012 235 VG 236 (347)
Q Consensus 235 ~g 236 (347)
.+
T Consensus 87 a~ 88 (363)
T d2c5aa1 87 AA 88 (363)
T ss_dssp CC
T ss_pred cc
Confidence 74
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=92.59 E-value=0.06 Score=45.57 Aligned_cols=38 Identities=21% Similarity=0.165 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHh
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQK 194 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~ 194 (347)
..++|||+||+|.+|...+..+...|.+|++++++.++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~ 39 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG 39 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence 45789999999999999999999999999999987653
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=92.43 E-value=0.82 Score=33.94 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=54.4
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCC-eeeecCCHHHHHHHHHHHCCCCcc
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFD-EAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~-~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
.+.+|.+||=.++ +.|...+.. ...|++|+.++.+++..+.+++ .+|.. .+...+. +..........+.||
T Consensus 38 ~~~~g~~vLDl~~--G~G~~~i~a-~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~--d~~~~~~~~~~~~fD 112 (171)
T d1ws6a1 38 RYPRRGRFLDPFA--GSGAVGLEA-ASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV--EVFLPEAKAQGERFT 112 (171)
T ss_dssp HCTTCCEEEEETC--SSCHHHHHH-HHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH--HHHHHHHHHTTCCEE
T ss_pred cccCCCeEEEecc--ccchhhhhh-hhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh--hcccccccccCCccc
Confidence 4677888876653 233333443 3469999999999987776652 35653 3443333 222222223334799
Q ss_pred EEEeC----CC-hhhHHHHH--HhhhcCCeEEE
Q 019012 230 IYFDN----VG-GEMLDAAL--LNMRDHGRIAV 255 (347)
Q Consensus 230 ~vid~----~g-~~~~~~~~--~~l~~~G~~v~ 255 (347)
+||-- .+ ...+...+ ..++++|.++.
T Consensus 113 ~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi 145 (171)
T d1ws6a1 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred eeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence 99731 12 12333333 24778887664
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=92.30 E-value=0.14 Score=42.66 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc-----CC-----CeeeecCCHHHHHHHHHHHC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL-----GF-----DEAFNYNDETDLVAALKRCF 224 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~-----g~-----~~vi~~~~~~~~~~~i~~~~ 224 (347)
...++|||+|+ +.|..+-++++.... +|+++..+++=.+.+++-+ ++ .+++.. +..+.+++ +
T Consensus 76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~----Da~~~l~~-~ 148 (312)
T d1uira_ 76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID----DARAYLER-T 148 (312)
T ss_dssp SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES----CHHHHHHH-C
T ss_pred CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEc----hHHHHhhh-c
Confidence 45679999994 456667777777654 9999999998777776333 11 022222 34445554 4
Q ss_pred CCCccEEE-eCC---Ch----------hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIYF-DNV---GG----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~vi-d~~---g~----------~~~~~~~~~l~~~G~~v~~g 257 (347)
.+.+|++| |.. +. +.++.+.+.|+++|.++.-.
T Consensus 149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~ 195 (312)
T d1uira_ 149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (312)
T ss_dssp CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence 45899996 432 21 25678889999999987643
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=92.23 E-value=0.071 Score=43.65 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=30.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+++|+|+|| |..|++|+..+...|.+|++.+.++
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 578999997 9999999999999999999998653
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.22 E-value=0.1 Score=36.37 Aligned_cols=35 Identities=23% Similarity=0.089 Sum_probs=31.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.++++|.|| |.+|+-+++.++.+|.+|+++.+.+.
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence 478999997 99999999999999999999987653
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=92.15 E-value=0.14 Score=35.92 Aligned_cols=48 Identities=15% Similarity=0.088 Sum_probs=37.6
Q ss_pred hhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 142 GFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 142 ~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
..++..++ +.. +.+++++|.|| |.+|+-.++.+..+|.+|+++.+++.
T Consensus 9 v~~s~~~l-~l~--~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 9 IVDSTGAL-DFQ--NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp EEEHHHHT-SCS--SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEchhHhh-Ccc--cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 34566665 322 34588999997 99999999999999999999997643
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.12 E-value=0.12 Score=36.45 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
..++++|+|| |.+|+-.++.+..+|.+|+++.+.+
T Consensus 22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 3479999997 9999999999999999999999764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=92.08 E-value=0.075 Score=44.69 Aligned_cols=73 Identities=14% Similarity=0.119 Sum_probs=46.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCCCee-eecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGFDEA-FNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|||+||+|-+|...++.+...| .+|++++....+...+.+.-++..+ .|-+...++.+.+.+ ++|+||.+++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCccccccc
Confidence 59999999999999998888888 4899998765544433311122211 122221133332322 4899999887
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=91.99 E-value=0.3 Score=39.73 Aligned_cols=95 Identities=15% Similarity=0.091 Sum_probs=65.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEECChHhHHHHHHHc---CCC-eeeecCCHHHHHHHHHHHC-C
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH--GCYVVGSAGSSQKVDLLKNKL---GFD-EAFNYNDETDLVAALKRCF-P 225 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~--G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~-~ 225 (347)
.++.++.+||=.|+ +.|..+..+++.. +.+|++++.++...+.+++.+ +.. .....+ +.++. .
T Consensus 23 ~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d--------~~~~~~~ 92 (281)
T d2gh1a1 23 WKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD--------ATEIELN 92 (281)
T ss_dssp SCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC--------TTTCCCS
T ss_pred hccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc--------ccccccc
Confidence 35677889999984 4688888888875 569999999998888776332 322 111111 11111 2
Q ss_pred CCccEEEeCCCh-------hhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYFDNVGG-------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g 257 (347)
+.||+|+-...- ..++.+.+.|+++|.++...
T Consensus 93 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 379999865431 26788999999999998765
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=91.92 E-value=0.18 Score=42.08 Aligned_cols=98 Identities=18% Similarity=0.137 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH---HcCCCe--eeecCCHHHHHHHHHHHCCCCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN---KLGFDE--AFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~---~~g~~~--vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
.+|++||=.++ | +|..++++|+ .+.+|+.++.++...+.+++ ..|.+. ++..+.. ++.+.+.+ .++.||+
T Consensus 144 ~~g~rVLDl~~-g-tG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~-~~~~~~~~-~~~~fD~ 218 (318)
T d1wxxa2 144 FRGERALDVFS-Y-AGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF-DLLRRLEK-EGERFDL 218 (318)
T ss_dssp CCEEEEEEETC-T-TTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH-HHHHHHHH-TTCCEEE
T ss_pred hCCCeeeccCC-C-CcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH-HHhhhhHh-hhcCCCE
Confidence 46899987764 2 2444455554 35599999999998887763 245542 3333322 33333332 1237998
Q ss_pred EEe-C--CC--h-----------hhHHHHHHhhhcCCeEEEEcc
Q 019012 231 YFD-N--VG--G-----------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 231 vid-~--~g--~-----------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
|+- . .+ . +.+..+++.|+|||.+++...
T Consensus 219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc 262 (318)
T d1wxxa2 219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 262 (318)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 873 1 11 1 134577888999999988765
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.92 E-value=0.17 Score=35.47 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.++++++++|.|| |.+|.-++..++..|.+|+.+.+++.
T Consensus 26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence 3567899999997 99999999999999999999997654
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=91.92 E-value=0.34 Score=39.38 Aligned_cols=94 Identities=15% Similarity=0.111 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC---------------eeeecCCHHHHHHHH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD---------------EAFNYNDETDLVAAL 220 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~---------------~vi~~~~~~~~~~~i 220 (347)
.+.++|||+|+ +.|..+-.+++.-..+|++++.+++=.+.+++-++.. +++.. +....+
T Consensus 71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~----Da~~~l 144 (276)
T d1mjfa_ 71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG----DGFEFI 144 (276)
T ss_dssp SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES----CHHHHH
T ss_pred CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC----hHHHHH
Confidence 45689999995 4444455556543448999999988777777323221 22222 334445
Q ss_pred HHHCCCCccEEE-eCCCh----------hhHHHHHHhhhcCCeEEEEc
Q 019012 221 KRCFPQGIDIYF-DNVGG----------EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 221 ~~~~~g~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g 257 (347)
++ .+.+|++| |+... +.++.+.+.|+++|.++.-.
T Consensus 145 ~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~ 190 (276)
T d1mjfa_ 145 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 190 (276)
T ss_dssp HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred hc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence 53 34799986 44431 25788899999999988754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=91.89 E-value=0.23 Score=36.85 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=62.9
Q ss_pred cCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH
Q 019012 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV 217 (347)
Q Consensus 138 l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 217 (347)
+|+...-.+..|.+..---.|++++|.|-+..+|.-...++...|++|+.+.+... +..
T Consensus 17 ~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~ 75 (166)
T d1b0aa1 17 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLR 75 (166)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHH
T ss_pred CCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhH
Confidence 34333334444433333357999999999888999999999999999987764332 122
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 218 AALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+.+++ +|+++-++|...+- --+.++++..++.+|..
T Consensus 76 ~~~~~-----ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 76 HHVEN-----ADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN 111 (166)
T ss_dssp HHHHH-----CSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred HHHhh-----hhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence 22332 88999999864221 12467888888888864
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.89 E-value=0.62 Score=34.24 Aligned_cols=45 Identities=16% Similarity=0.036 Sum_probs=37.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD 205 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~ 205 (347)
.+|-+.| .|.+|...+.-+...|.+|++.+++.++.+.+. ..+..
T Consensus 2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~ 46 (162)
T d3cuma2 2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGAS 46 (162)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE
T ss_pred CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhcc
Confidence 3688888 599999888877778999999999999988887 77653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.87 E-value=0.11 Score=40.31 Aligned_cols=69 Identities=17% Similarity=0.153 Sum_probs=43.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
.++|||+||+|-+|...+..+...|. +|++..+++.. . ...+ +.... ++.+ +.+...+.+|.|+.|.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~------~--~~~~-~~~~~-d~~~-~~~~~~~~~d~vi~~~ 70 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------E--HPRL-DNPVG-PLAE-LLPQLDGSIDTAFCCL 70 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------C--CTTE-ECCBS-CHHH-HGGGCCSCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh------h--cccc-ccccc-chhh-hhhccccchheeeeee
Confidence 36899999999999999998888886 67766654321 0 0111 11111 2222 2223334689999998
Q ss_pred Ch
Q 019012 236 GG 237 (347)
Q Consensus 236 g~ 237 (347)
|.
T Consensus 71 g~ 72 (212)
T d2a35a1 71 GT 72 (212)
T ss_dssp CC
T ss_pred ee
Confidence 74
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.82 E-value=1.8 Score=32.18 Aligned_cols=92 Identities=12% Similarity=0.099 Sum_probs=59.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEE-ECChHhHHHHHHHcCCCeee-ecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGS-AGSSQKVDLLKNKLGFDEAF-NYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~-~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
++.|.|. |.+|...++.++.. +++++++ +.++++.+.+.++++..... .++ ++.+.+. ...+|+|+-|+.
T Consensus 3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~---~~~iD~v~I~tp 75 (184)
T d1ydwa1 3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLE---DPEIDALYVPLP 75 (184)
T ss_dssp EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHH---CTTCCEEEECCC
T ss_pred EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhh---ccccceeeeccc
Confidence 5788995 99998888888777 6688865 45556655554467753211 122 3333333 136999999988
Q ss_pred h-hhHHHHHHhhhcCCeEEEEccc
Q 019012 237 G-EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 237 ~-~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
. .+++.+..++..+ +=+.+..+
T Consensus 76 ~~~h~~~~~~~l~~g-~~v~~EKP 98 (184)
T d1ydwa1 76 TSLHVEWAIKAAEKG-KHILLEKP 98 (184)
T ss_dssp GGGHHHHHHHHHTTT-CEEEECSS
T ss_pred chhhcchhhhhhhcc-ceeecccc
Confidence 6 5788888888865 55556543
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.80 E-value=0.62 Score=33.60 Aligned_cols=94 Identities=18% Similarity=0.104 Sum_probs=57.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHhHHHHHHHcCCCeee----ecCCHHHHHHHHHHHCCCCccEEE
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQKVDLLKNKLGFDEAF----NYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~~~~~~~~~g~~~vi----~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
.+|.|.||+|.+|..++.++...|. +++..+.++.+. .+.+-....... ..... +..+.++ +.|+++
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~-~a~Dl~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivV 73 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYLGPE-QLPDCLK-----GCDVVV 73 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEE
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch-hhHHHhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEE
Confidence 3688999889999999998888876 788888876653 333122222111 11111 3444443 499999
Q ss_pred eCCChh----------------hHHHHHH---hhhcCCeEEEEccc
Q 019012 233 DNVGGE----------------MLDAALL---NMRDHGRIAVCGMV 259 (347)
Q Consensus 233 d~~g~~----------------~~~~~~~---~l~~~G~~v~~g~~ 259 (347)
-+.|.. .++.... .-.+.+.++.+..+
T Consensus 74 itag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNP 119 (144)
T d1mlda1 74 IPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (144)
T ss_dssp ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred ECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 888721 1222222 23567888887664
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=91.76 E-value=0.55 Score=32.99 Aligned_cols=91 Identities=12% Similarity=0.046 Sum_probs=60.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChh-
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGE- 238 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~- 238 (347)
.++|.|. |.+|+.+++.++ |.+|++++.++++.+.++ ..|.. ++..+. .-.+.+++..-..++.++-++..+
T Consensus 2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~-~i~Gd~--~~~~~L~~a~i~~A~~vi~~~~~d~ 74 (129)
T d2fy8a1 2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGAN-FVHGDP--TRVSDLEKANVRGARAVIVNLESDS 74 (129)
T ss_dssp CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCE-EEESCT--TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCcc-cccccc--CCHHHHHHhhhhcCcEEEEeccchh
Confidence 4788896 999988777664 556788888888888888 77874 443332 123445554444788998888754
Q ss_pred ---hHHHHHHhhhcCCeEEEEc
Q 019012 239 ---MLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 239 ---~~~~~~~~l~~~G~~v~~g 257 (347)
......+.+.+..+++...
T Consensus 75 ~n~~~~~~~r~~~~~~~iia~~ 96 (129)
T d2fy8a1 75 ETIHCILGIRKIDESVRIIAEA 96 (129)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEC
T ss_pred hhHHHHHHHHHHCCCceEEEEE
Confidence 2344555666776666553
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.73 E-value=0.12 Score=40.59 Aligned_cols=98 Identities=16% Similarity=0.098 Sum_probs=64.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHC--CCCcc
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCF--PQGID 229 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~--~g~~d 229 (347)
...++.+||=+| .+.|..+..+++..+.+|++++.+++-.+.+++.+... ..+..... + +.++. .+.||
T Consensus 57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d----~~~~~~~~~~fD 129 (222)
T d2ex4a1 57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-G----LQDFTPEPDSYD 129 (222)
T ss_dssp -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-C----GGGCCCCSSCEE
T ss_pred CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-c----cccccccccccc
Confidence 456778999999 56787788887776779999999999888888433211 01111111 1 12222 23799
Q ss_pred EEEeCCC-----h----hhHHHHHHhhhcCCeEEEEcc
Q 019012 230 IYFDNVG-----G----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 230 ~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
+|+..-. . ..+..+.+.|+++|.++....
T Consensus 130 ~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~ 167 (222)
T d2ex4a1 130 VIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 167 (222)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence 9986332 1 256778889999999988754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=91.69 E-value=0.51 Score=35.26 Aligned_cols=44 Identities=18% Similarity=0.045 Sum_probs=36.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 204 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~ 204 (347)
.+|-++| .|.+|...+.-+...|.+|++.++++++.+.+. +.++
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~ 46 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEA 46 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTT
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhcc
Confidence 4578899 599999988888888999999999999988887 5443
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.69 E-value=0.16 Score=42.23 Aligned_cols=94 Identities=19% Similarity=0.177 Sum_probs=54.9
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHH---HHHHHcCCC---eeeecCCHHHHHHHHH
Q 019012 149 FHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVD---LLKNKLGFD---EAFNYNDETDLVAALK 221 (347)
Q Consensus 149 l~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~---~~~~~~g~~---~vi~~~~~~~~~~~i~ 221 (347)
+.+...+.+|++||-+|+ | .|..++.+|++ |+ +|++++.++.-.. ..+ +.+.. .+++.+. .
T Consensus 27 i~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~-~~~~~~~i~~~~~~~--------~ 94 (311)
T d2fyta1 27 IYQNPHIFKDKVVLDVGC-G-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIR-LNKLEDTITLIKGKI--------E 94 (311)
T ss_dssp HHHCGGGTTTCEEEEETC-T-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHH-HTTCTTTEEEEESCT--------T
T ss_pred HHhccccCCcCEEEEECC-C-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHH-HhCCCccceEEEeeH--------H
Confidence 444456678999999995 4 67777777764 77 8999998875322 222 33432 2333222 1
Q ss_pred HHC-C-CCccEEEeCC-C----hh-hH---H-HHHHhhhcCCeEE
Q 019012 222 RCF-P-QGIDIYFDNV-G----GE-ML---D-AALLNMRDHGRIA 254 (347)
Q Consensus 222 ~~~-~-g~~d~vid~~-g----~~-~~---~-~~~~~l~~~G~~v 254 (347)
++. . ..+|+|+... + .+ .+ . ..-+.|+|+|+++
T Consensus 95 ~l~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii 139 (311)
T d2fyta1 95 EVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 139 (311)
T ss_dssp TSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred HhcCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence 221 2 3799998522 2 12 22 2 2335789999875
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=91.64 E-value=0.47 Score=38.44 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc----CC--C---eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL----GF--D---EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~----g~--~---~vi~~~~~~~~~~~i~~~~~ 225 (347)
.+.++|||+| |+-|..+-.++++.+. +|.+++.+++=.+.+++-+ ++ + .++.. +....+++ +.
T Consensus 74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~----D~~~~l~~-~~ 146 (274)
T d1iy9a_ 74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE 146 (274)
T ss_dssp SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec----hHHHHHhh-cC
Confidence 4568999999 5556667777887776 9999999998777776222 22 1 22322 23334544 33
Q ss_pred CCccEEE-eCCC----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYF-DNVG----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vi-d~~g----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
..+|+++ |... .+.++.+.+.|+++|.++.-.
T Consensus 147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~ 189 (274)
T d1iy9a_ 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (274)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence 4799996 4322 135788999999999998754
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.61 E-value=0.11 Score=41.09 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
...+++|+|.|| |+.|+.++..++..|.+|++++.+++
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 356789999997 99999999999999999999987654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.58 E-value=0.086 Score=38.69 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
-.|++|||.|| |.+|..-+..+...|++|++++.
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 35899999997 99999999999999999998864
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=91.52 E-value=0.064 Score=43.84 Aligned_cols=36 Identities=17% Similarity=0.143 Sum_probs=31.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
-++|||+||+|-+|...+..+...|.+|++++++..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~ 38 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 38 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 357999999999999999999899999999998653
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=91.27 E-value=0.084 Score=33.91 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=30.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
++|.|+|+ |-.|++.++-++.+|.++++.+.+++
T Consensus 2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~ 35 (78)
T d3etja2 2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE 35 (78)
T ss_dssp EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 47899996 99999999999999999999997654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.22 E-value=0.11 Score=36.71 Aligned_cols=37 Identities=22% Similarity=0.155 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
+.+++++|.|| |-+|+-.++.++.+|.+|+++.+++.
T Consensus 23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence 34689999997 99999999999999999999997654
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=91.18 E-value=0.3 Score=39.06 Aligned_cols=100 Identities=14% Similarity=0.151 Sum_probs=62.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~g 226 (347)
....+....+||=+| ++.|..++.+++.. +.++++++.++ ..+.+++ +.|...-+..... ++ .+...+
T Consensus 74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~~-~~~~a~~~~~~~~~~~rv~~~~~-D~----~~~~~~ 145 (253)
T d1tw3a2 74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMAG-TVDTARSYLKDEGLSDRVDVVEG-DF----FEPLPR 145 (253)
T ss_dssp HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECTT-HHHHHHHHHHHTTCTTTEEEEEC-CT----TSCCSS
T ss_pred hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCHH-HHHHHHHHHHHhhcccchhhccc-cc----hhhccc
Confidence 445677788999998 66788999999888 56999988643 3344331 3343211211111 11 111123
Q ss_pred CccEEEeCCC-----h----hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVG-----G----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
++|+|+-... . ..++++.++|+|+|+++....
T Consensus 146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence 6899874332 1 247888999999999998754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=91.15 E-value=0.62 Score=30.95 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=48.9
Q ss_pred CCCCCCEEEEEcCCchHHHHH-HHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 154 SPKSGEYVFVSAASGAVGQLV-GQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~a-i~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
..+..+++.+.|- |++|..+ +++++..|++|...+.... ..+.++ +.|+. +.....+ + .+ .+.|++
T Consensus 4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~-v~~g~~~-~---~i-----~~~d~v 71 (96)
T d1p3da1 4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAK-IYIGHAE-E---HI-----EGASVV 71 (96)
T ss_dssp CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCE-EEESCCG-G---GG-----TTCSEE
T ss_pred cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCe-EEECCcc-c---cC-----CCCCEE
Confidence 3456789999995 8888666 7899999999999998643 446666 78875 3333332 1 11 247888
Q ss_pred EeCCC
Q 019012 232 FDNVG 236 (347)
Q Consensus 232 id~~g 236 (347)
+-+.+
T Consensus 72 V~S~A 76 (96)
T d1p3da1 72 VVSSA 76 (96)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 77666
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.15 E-value=2.7 Score=35.08 Aligned_cols=106 Identities=21% Similarity=0.200 Sum_probs=67.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---ChHhHHHHHHHcCCCeeeec-C-------CH------
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---SSQKVDLLKNKLGFDEAFNY-N-------DE------ 213 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~-~-------~~------ 213 (347)
+...++++..|+... +|..|.+++..|+.+|.+++++.. ++.|.+.++ .+|+.-+... . ..
T Consensus 90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~vv~v~~~~~~~~~~~~~~~~~~ 167 (355)
T d1jbqa_ 90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEIVRTPTNARFDSPESHVGVAWR 167 (355)
T ss_dssp HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEEEECCC-------CCHHHHHHH
T ss_pred HcCCcccCceEEEec-ccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeEEEecccccchhhhhhhhHHHH
Confidence 335566666655555 699999999999999997666654 346788888 9998533210 0 00
Q ss_pred ------------------------HHHHHHHHHHCCCCccEEEeCCCh-h---hHHHHHHhhhcCCeEEEEcc
Q 019012 214 ------------------------TDLVAALKRCFPQGIDIYFDNVGG-E---MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 214 ------------------------~~~~~~i~~~~~g~~d~vid~~g~-~---~~~~~~~~l~~~G~~v~~g~ 258 (347)
.....+|.+..++.+|.++-++|+ . .+...++...+.-+++.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence 001223333334468999999985 3 34455666667788877654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=91.12 E-value=0.017 Score=43.33 Aligned_cols=92 Identities=22% Similarity=0.222 Sum_probs=56.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcC----CC--eeeecCCHHHHHHHHHHHCCCCccEEE
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLG----FD--EAFNYNDETDLVAALKRCFPQGIDIYF 232 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g----~~--~vi~~~~~~~~~~~i~~~~~g~~d~vi 232 (347)
+|.|.|++|-+|++.++++... ++++++....+.. ...-+.+| .. .+....+ +.+ ....+|+++
T Consensus 6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~-~~~g~d~~~~~~~~~~~~~~~~~-------~~~-~~~~~DViI 76 (162)
T d1diha1 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGS-SLLGSDAGELAGAGKTGVTVQSS-------LDA-VKDDFDVFI 76 (162)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTC-TTCSCCTTCSSSSSCCSCCEESC-------STT-TTTSCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccc-hhccchhhhhhccccCCceeecc-------HHH-HhcccceEE
Confidence 6899999999999999988776 6677655533321 11000111 10 0000000 001 112589999
Q ss_pred eCCChhhHHHHHHhhhcCCeEEEEcccc
Q 019012 233 DNVGGEMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 233 d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
|++..+.....++.....|.=+.+|.+.
T Consensus 77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred EeccHHHHHHHHHHHHhccceeEEecCC
Confidence 9999888788888888888777788653
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=91.11 E-value=0.19 Score=39.45 Aligned_cols=93 Identities=11% Similarity=0.014 Sum_probs=58.7
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCC-CeeeecCCHHHHHHHHHHHC-CCCccE
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEAFNYNDETDLVAALKRCF-PQGIDI 230 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~i~~~~-~g~~d~ 230 (347)
.+.-++.+||=+|+ +.|..+..+++ .|.+|++++.+++..+.+++...- ..++...- .... ++.||+
T Consensus 16 ~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~--------~~~~~~~~fD~ 84 (225)
T d2p7ia1 16 TPFFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRF--------EDAQLPRRYDN 84 (225)
T ss_dssp GGGCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCG--------GGCCCSSCEEE
T ss_pred hhhCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccccccccccc--------ccccccccccc
Confidence 33455778999984 45776666654 488999999999999998844432 12222221 1112 237999
Q ss_pred EEeCCCh-------hhHHHHH-HhhhcCCeEEEE
Q 019012 231 YFDNVGG-------EMLDAAL-LNMRDHGRIAVC 256 (347)
Q Consensus 231 vid~~g~-------~~~~~~~-~~l~~~G~~v~~ 256 (347)
|+-.--- ..+.... ++|+++|.++..
T Consensus 85 I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 85 IVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence 9743221 1345565 578999998864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.88 E-value=0.15 Score=35.87 Aligned_cols=34 Identities=18% Similarity=-0.035 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
..++++|.|| |.+|+-.++.++.+|.+|+++.++
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 3468999997 999999999999999999998764
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.87 E-value=0.43 Score=35.53 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=62.4
Q ss_pred cCChhhhHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHH
Q 019012 138 LGMPGFTAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLV 217 (347)
Q Consensus 138 l~~~~~ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~ 217 (347)
+|+.....+..|.+..---.|++++|.|-+.-+|.-...++...|++|+.+.+......
T Consensus 19 ~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~--------------------- 77 (170)
T d1a4ia1 19 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD--------------------- 77 (170)
T ss_dssp CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH---------------------
T ss_pred CCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH---------------------
Confidence 34333444444433222357999999999888999999999999999998875433221
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 218 AALKRCFPQGIDIYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 218 ~~i~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+.++ ..|+++-++|...+- --+.++++-.++.+|..
T Consensus 78 ~~~~-----~aDivi~a~G~~~~i-~~~~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 78 EEVN-----KGDILVVATGQPEMV-KGEWIKPGAIVIDCGIN 113 (170)
T ss_dssp HHHT-----TCSEEEECCCCTTCB-CGGGSCTTCEEEECCCB
T ss_pred HHHh-----hccchhhcccccccc-ccccccCCCeEeccCcc
Confidence 1111 378888888864321 13477888888888753
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.81 E-value=0.16 Score=35.31 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=30.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+++++|.|| |.+|+-+++.++.+|.+|+++.+.+
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence 479999997 9999999999999999999998764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.69 E-value=0.2 Score=35.32 Aligned_cols=34 Identities=9% Similarity=-0.001 Sum_probs=31.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
.++++|.|| |.+|+-.++.++.+|.+|+++.+++
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence 479999997 9999999999999999999999864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.68 E-value=0.24 Score=35.34 Aligned_cols=39 Identities=15% Similarity=0.059 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.++++++++|.|| |.+|+-++..++..|.+|+++.+.+.
T Consensus 31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence 4567899999997 99999999999999999999997653
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.61 E-value=0.34 Score=38.52 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=32.0
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
--.|.+|+|.| .|.+|..+++++...|++|++++.+
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence 35789999999 5999999999999999999988854
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=90.58 E-value=0.37 Score=34.97 Aligned_cols=82 Identities=22% Similarity=0.148 Sum_probs=47.1
Q ss_pred EEEEEcCCchHHHHHHHH-HHHCC---CEEEEEECChHhHHHHHHHcC-CCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 160 YVFVSAASGAVGQLVGQL-AKLHG---CYVVGSAGSSQKVDLLKNKLG-FDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~l-a~~~G---~~V~~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+|-|.||+|-+|+-.+++ +.+.. .+++...++........ ..+ ...+.+..+. . .+. ++|++|-|
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~~~~~-~---~~~-----~~DivF~a 72 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQDAFDL-E---ALK-----ALDIIVTC 72 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEETTCH-H---HHH-----TCSEEEEC
T ss_pred EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeecccch-h---hhh-----cCcEEEEe
Confidence 688999999999999985 44432 36776665543211111 111 1112222221 1 122 49999999
Q ss_pred CChhhHHHHHHhhhcCC
Q 019012 235 VGGEMLDAALLNMRDHG 251 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G 251 (347)
++.+........+...|
T Consensus 73 ~~~~~s~~~~~~~~~~g 89 (146)
T d1t4ba1 73 QGGDYTNEIYPKLRESG 89 (146)
T ss_dssp SCHHHHHHHHHHHHHTT
T ss_pred cCchHHHHhhHHHHhcC
Confidence 99876655555555544
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.52 E-value=0.17 Score=35.75 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+.+++++|.|| |.+|+-.++..+.+|.+|+++.+.+
T Consensus 24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 44689999997 9999999999999999999998764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=90.47 E-value=0.15 Score=42.18 Aligned_cols=38 Identities=18% Similarity=0.137 Sum_probs=32.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
.....++|+|+|| |..|+.++..+...|.+|++.+.++
T Consensus 26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3456679999997 9999999998888899999998654
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=90.35 E-value=0.81 Score=38.79 Aligned_cols=93 Identities=23% Similarity=0.162 Sum_probs=62.3
Q ss_pred EEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc---CCCe--------------eeecCCHHHHHHHHHHHC
Q 019012 163 VSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL---GFDE--------------AFNYNDETDLVAALKRCF 224 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~---g~~~--------------vi~~~~~~~~~~~i~~~~ 224 (347)
|+.+-+++|.-.+.+|+..|+ +|++.+.+++..+.+++.+ +... .+..... +....+. ..
T Consensus 49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~~~~-~~ 126 (375)
T d2dula1 49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANRLMA-ER 126 (375)
T ss_dssp EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHHHHH-HS
T ss_pred EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhhhhH-hh
Confidence 445567788889999998888 8999999999888887322 2211 0111111 2222222 22
Q ss_pred CCCccEE-EeCCCh--hhHHHHHHhhhcCCeEEEEc
Q 019012 225 PQGIDIY-FDNVGG--EMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 225 ~g~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g 257 (347)
...||+| ||.-|+ +.++.++++++.+|.+....
T Consensus 127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa 162 (375)
T d2dula1 127 HRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 162 (375)
T ss_dssp TTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence 3379976 788886 58999999999998876654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=90.21 E-value=0.71 Score=34.94 Aligned_cols=86 Identities=21% Similarity=0.180 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNV 235 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~ 235 (347)
..+.+|.|+| .|.+|...+++++..|.+|+..++.... ... ...... ++.+.+++ .|++.-+.
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~------~~~--~~~~~~---~l~ell~~-----sDii~i~~ 104 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKL------PLG--NATQVQ---HLSDLLNM-----SDVVSLHV 104 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCC------CCT--TCEECS---CHHHHHHH-----CSEEEECC
T ss_pred ccceEEEEee-cccchhhhhhhcccccceEeeccccccc------hhh--hhhhhh---hHHHHHhh-----ccceeecc
Confidence 3578999999 5999999999999999999999865432 111 111111 34444444 78888766
Q ss_pred Ch--h----hHHHHHHhhhcCCeEEEEcc
Q 019012 236 GG--E----MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 236 g~--~----~~~~~~~~l~~~G~~v~~g~ 258 (347)
.- + .-.+.++.|+++..+|.++-
T Consensus 105 plt~~T~~li~~~~l~~mk~~a~lIN~aR 133 (188)
T d1sc6a1 105 PENPSTKNMMGAKEISLMKPGSLLINASR 133 (188)
T ss_dssp CSSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred cCCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence 52 1 23678888888888887764
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=89.97 E-value=1.2 Score=33.26 Aligned_cols=81 Identities=12% Similarity=0.049 Sum_probs=51.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH--hHHHHHHHcCCC---------eeeecCCHHHHHHHHHHHCCCCc
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ--KVDLLKNKLGFD---------EAFNYNDETDLVAALKRCFPQGI 228 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~--~~~~~~~~~g~~---------~vi~~~~~~~~~~~i~~~~~g~~ 228 (347)
.|.|+|+ |..|.+.+..+-..|.+|+...++.+ ..+.++ +-.-. ..+.... +..+.++ ..
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~~--~~~~~~~-----~a 72 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWPE--QLEKCLE-----NA 72 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECGG--GHHHHHT-----TC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccccc--cHHHHHh-----cc
Confidence 5789996 99999888888777899999887433 334443 21110 0111111 3333332 48
Q ss_pred cEEEeCCChhhHHHHHHhhhc
Q 019012 229 DIYFDNVGGEMLDAALLNMRD 249 (347)
Q Consensus 229 d~vid~~g~~~~~~~~~~l~~ 249 (347)
|+++-++....++..++.+.+
T Consensus 73 d~Ii~avps~~~~~~~~~l~~ 93 (180)
T d1txga2 73 EVVLLGVSTDGVLPVMSRILP 93 (180)
T ss_dssp SEEEECSCGGGHHHHHHHHTT
T ss_pred chhhcccchhhhHHHHHhhcc
Confidence 999999998777777766554
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.74 E-value=0.21 Score=41.79 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
..+++||+||+|-+|...+..+...|.+|+++++
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 3468999999999999999999999999999975
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=89.71 E-value=0.32 Score=38.49 Aligned_cols=89 Identities=13% Similarity=0.077 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-eeeecCCHHHHHHHHHHHC-CCCccE
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-EAFNYNDETDLVAALKRCF-PQGIDI 230 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~~~-~g~~d~ 230 (347)
.++.+||=+|+ | .|..+..+++. |.+|++++.|++-++.+++. .|.. .++..+ +..+. .+.||+
T Consensus 36 ~~~~~vLDiGC-G-~G~~~~~l~~~-g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d--------~~~~~~~~~fD~ 104 (246)
T d1y8ca_ 36 LVFDDYLDLAC-G-TGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD--------ISNLNINRKFDL 104 (246)
T ss_dssp CCTTEEEEETC-T-TSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC--------GGGCCCSCCEEE
T ss_pred CCCCeEEEEeC-c-CCHHHHHHHHh-CCccEeeccchhhhhhccccccccCccceeeccc--------hhhhcccccccc
Confidence 44578999995 3 56677777664 88999999999887777632 2332 223221 22222 247999
Q ss_pred EEeCCCh-----------hhHHHHHHhhhcCCeEEE
Q 019012 231 YFDNVGG-----------EMLDAALLNMRDHGRIAV 255 (347)
Q Consensus 231 vid~~g~-----------~~~~~~~~~l~~~G~~v~ 255 (347)
|+-..+. ..++.+.+.|+++|.++.
T Consensus 105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 140 (246)
T d1y8ca_ 105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9853221 146778888999999885
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=89.65 E-value=1.6 Score=31.70 Aligned_cols=90 Identities=19% Similarity=0.082 Sum_probs=53.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEECChHhHHHHHHHcCCCe-eeecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGC---YVVGSAGSSQKVDLLKNKLGFDE-AFNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~---~V~~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
|-+|.|.||+|-+|.-.++++..+.. ++...+++........ ...... ..+..+. + ....|++|-
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~-~~~~~~~~~~~~~~-~---------~~~~d~~f~ 69 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTET-A---------FEGVDIALF 69 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE-ETTEEEEEEECCTT-T---------TTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc-ccCCcccccccchh-h---------hhhhhhhhh
Confidence 45799999999999999999988853 5555554322111111 001010 1111111 1 125899999
Q ss_pred CCChh-hHHHHHHhhhcCCeEEEEcc
Q 019012 234 NVGGE-MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 234 ~~g~~-~~~~~~~~l~~~G~~v~~g~ 258 (347)
+.+.. ....+.+....+-+++..+.
T Consensus 70 ~~~~~~s~~~~~~~~~~~~~VIDlSs 95 (154)
T d2gz1a1 70 SAGSSTSAKYAPYAVKAGVVVVDNTS 95 (154)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred ccCccchhhHHhhhccccceehhcCh
Confidence 99865 45555566777788887664
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=89.46 E-value=1.5 Score=28.52 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=44.5
Q ss_pred EEEEEcCCchHHHHH-HHHHHHCCCEEEEEECChH-hHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLV-GQLAKLHGCYVVGSAGSSQ-KVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~a-i~la~~~G~~V~~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|-+.|- |++|..+ +++++..|+.|...+..+. ..+.++ ++|+......... ++ .+.|+|+=+.+
T Consensus 3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~~gh~~~-~i---------~~~d~vV~SsA 69 (89)
T d1j6ua1 3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIFVPHSAD-NW---------YDPDLVIKTPA 69 (89)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEESSCCTT-SC---------CCCSEEEECTT
T ss_pred EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEEeeeccc-cc---------CCCCEEEEecC
Confidence 5777785 8888654 6888999999999998763 456677 8998633332221 11 24788887665
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=89.36 E-value=1.7 Score=33.25 Aligned_cols=106 Identities=12% Similarity=0.021 Sum_probs=65.7
Q ss_pred hHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHH
Q 019012 144 TAYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAA 219 (347)
Q Consensus 144 ta~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~ 219 (347)
.-|..++.. .+..||=+| .|.|..++.+|+.. +.++++++.+......+.+ +.|.+.+--... +....
T Consensus 20 ~~w~~~F~~----~~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~~l 91 (204)
T d2fcaa1 20 GKWNTVFGN----DNPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DADTL 91 (204)
T ss_dssp TCHHHHHTS----CCCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGGGH
T ss_pred hHHHHHcCC----CCceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chhhh
Confidence 346665432 234567777 56788899999887 6699999999987666532 456654321222 22222
Q ss_pred HHHHCCCCccEEEeCCC---------------hhhHHHHHHhhhcCCeEEEEc
Q 019012 220 LKRCFPQGIDIYFDNVG---------------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 220 i~~~~~g~~d~vid~~g---------------~~~~~~~~~~l~~~G~~v~~g 257 (347)
...+..+.+|.|+-.-. .+.++...+.|++||.+....
T Consensus 92 ~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T 144 (204)
T d2fcaa1 92 TDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 144 (204)
T ss_dssp HHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred hcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence 23333346777653321 136788889999999987753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=89.28 E-value=0.37 Score=38.54 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
-.|.+|+|.| .|.+|..+++++...|++|++++.+
T Consensus 34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~ 68 (255)
T d1bgva1 34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP 68 (255)
T ss_dssp STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence 4788999999 5999999999999999999988753
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.10 E-value=0.4 Score=34.97 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=39.7
Q ss_pred hhhHHHHHHhhcCCCCCCEEEEE--cCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 142 GFTAYAGFHEVCSPKSGEYVFVS--AASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 142 ~~ta~~al~~~~~~~~~~~vLI~--Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
..|....+ . .+..+++.++|+ |+ |-+|+-+++.+..+|++|+++++.+.
T Consensus 25 v~t~~d~l-~-~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 25 QLTPEQVM-D-GKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp EECHHHHH-H-TCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred EECHHHHh-c-CccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 44777776 3 567788999887 54 78999999999999999999998653
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.09 E-value=0.21 Score=41.71 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=29.6
Q ss_pred EE-EEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YV-FVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~v-LI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
.| ||+||+|-+|...+..+...|.+|+++++..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 46 9999999999999999988999999999854
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=89.01 E-value=0.34 Score=38.23 Aligned_cols=35 Identities=23% Similarity=0.180 Sum_probs=30.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
+.-.+|+|+|| |..|++++..+...|.+|+++++.
T Consensus 4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 34458999997 999999999999999999999964
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.89 E-value=0.29 Score=39.98 Aligned_cols=35 Identities=20% Similarity=0.119 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
-.|.+|+|.| .|.+|..+++++...|++|++++.+
T Consensus 34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4678999999 5999999999999999999988743
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=88.82 E-value=0.094 Score=39.99 Aligned_cols=90 Identities=13% Similarity=0.043 Sum_probs=55.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcCC----CeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLGF----DEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g~----~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+|.|.||+|-+|+-.++++..+- .++..+.++...-..+. +... ........ ..+....+.|++|-|
T Consensus 7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~Dvvf~a 78 (183)
T d2cvoa1 7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPHLITQDLPNLVA-------VKDADFSNVDAVFCC 78 (183)
T ss_dssp EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGGGTTSCCCCCBC-------GGGCCGGGCSEEEEC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-cccccccccccccchh-------hhhhhhcccceeeec
Confidence 68999999999999999998884 47776664443222222 1111 00000000 000001258999999
Q ss_pred CChhhHHHHHHhhhcCCeEEEEc
Q 019012 235 VGGEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g 257 (347)
............+...+..+...
T Consensus 79 lp~~~s~~~~~~l~~~~~~v~~~ 101 (183)
T d2cvoa1 79 LPHGTTQEIIKGLPQELKIVDLS 101 (183)
T ss_dssp CSSSHHHHHHHTSCSSCEEEECS
T ss_pred cccchHHHHHHHHHhcCcccccc
Confidence 99876666667788888877654
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=88.75 E-value=2.1 Score=31.48 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=57.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh--HhHHHHHHHcCCC-----e---------eeecCCHH-HHHHHHHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS--QKVDLLKNKLGFD-----E---------AFNYNDET-DLVAALKR 222 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~--~~~~~~~~~~g~~-----~---------vi~~~~~~-~~~~~i~~ 222 (347)
+|.|.| -|-+|+.+.+.+...+.+|+++-... +...++- ++.-. . .++.+.-. .-.....+
T Consensus 2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~ 79 (168)
T d2g82a1 2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (168)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence 578888 69999999998887788887776533 2344443 33211 0 01100000 00001222
Q ss_pred HCCC--CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEccc
Q 019012 223 CFPQ--GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 223 ~~~g--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+..+ ++|+|+||+|. ...+.+...+..+-+-|.+..+
T Consensus 80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP 119 (168)
T d2g82a1 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP 119 (168)
T ss_dssp CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred CcccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence 2233 79999999996 4667777888877666666544
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=88.69 E-value=1.2 Score=34.59 Aligned_cols=91 Identities=11% Similarity=0.165 Sum_probs=57.6
Q ss_pred EEEEEcCCchHHHH-HHHHHHHC-CCEEEEE-ECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCC-CccEEEe
Q 019012 160 YVFVSAASGAVGQL-VGQLAKLH-GCYVVGS-AGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQ-GIDIYFD 233 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~-ai~la~~~-G~~V~~~-~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g-~~d~vid 233 (347)
+|.|.|+ |.+|.. .+...+.. +++|+++ +++.++.+.+.+++|.. .+..+++ ++++... .+|+|+-
T Consensus 35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d-------~~ell~~~~iD~V~I 106 (221)
T d1h6da1 35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN-------FDKIAKDPKIDAVYI 106 (221)
T ss_dssp EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS-------GGGGGGCTTCCEEEE
T ss_pred EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc-------hhhhcccccceeeee
Confidence 7889995 999863 44444444 6788755 44666666665477763 2333332 2333323 7999999
Q ss_pred CCCh-hhHHHHHHhhhcCCeEEEEccc
Q 019012 234 NVGG-EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 234 ~~g~-~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
|+.. .+...+.++|..+ +-+++..+
T Consensus 107 ~tp~~~H~~~~~~al~~g-k~v~~EKP 132 (221)
T d1h6da1 107 ILPNSLHAEFAIRAFKAG-KHVMCEKP 132 (221)
T ss_dssp CSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred ccchhhhhhHHHHhhhcc-hhhhcCCC
Confidence 8886 5778888888664 55666543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=88.60 E-value=0.91 Score=36.54 Aligned_cols=72 Identities=13% Similarity=0.189 Sum_probs=43.4
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-EEEEEEC--ChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCC-CccEEEeCCC
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGC-YVVGSAG--SSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQ-GIDIYFDNVG 236 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~--~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g-~~d~vid~~g 236 (347)
|||+||+|-+|...+..+...|. +|++++. ...+..... ++.....++.. +....+.....- .+++++-+.+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence 79999999999998888888897 6888752 223333344 44433333332 333333332222 5777776654
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.54 E-value=0.16 Score=41.32 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=29.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.|+|.|| |+.|++++..++..|.+|++++.++.
T Consensus 4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4899997 99999999999999999999998653
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=88.49 E-value=0.43 Score=39.07 Aligned_cols=95 Identities=12% Similarity=0.162 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCC--------C-eeeecCCHHHHHHHHHHHCC
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGF--------D-EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~--------~-~vi~~~~~~~~~~~i~~~~~ 225 (347)
...++|||+|+ +-|..+-.++++.+. +|++++.+++=.+.+++-+.. . +++.. |..+.+++ +.
T Consensus 88 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~----Da~~~l~~-~~ 160 (295)
T d1inla_ 88 PNPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIA----NGAEYVRK-FK 160 (295)
T ss_dssp SSCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHGGG-CS
T ss_pred CCCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhh----hHHHHHhc-CC
Confidence 34579999995 445566677777665 899999999877777622211 0 12221 33444543 33
Q ss_pred CCccEEE-eCCC-----------hhhHHHHHHhhhcCCeEEEEc
Q 019012 226 QGIDIYF-DNVG-----------GEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 226 g~~d~vi-d~~g-----------~~~~~~~~~~l~~~G~~v~~g 257 (347)
+.+|++| |+.. .+.++.+.+.|+++|.++.-.
T Consensus 161 ~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~ 204 (295)
T d1inla_ 161 NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 204 (295)
T ss_dssp SCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence 4799987 4321 125788899999999998754
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.32 E-value=0.34 Score=33.86 Aligned_cols=36 Identities=11% Similarity=0.041 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+.+.+++|.|| |.+|+-+++.+...|.+|+++.+++
T Consensus 30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 34579999997 9999999999999999999998764
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=88.18 E-value=0.54 Score=37.57 Aligned_cols=100 Identities=13% Similarity=0.150 Sum_probs=62.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCeeeecCCHHHHHHHHHHHCCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDEAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi~~~~~~~~~~~i~~~~~g 226 (347)
....+....+||=+| ++.|..+..+++.. +.++++++. ++-.+.+++ +.|....+..... ++ .. -.+.
T Consensus 75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~---~~-~~p~ 146 (256)
T d1qzza2 75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DF---FK-PLPV 146 (256)
T ss_dssp HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CT---TS-CCSC
T ss_pred hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-ec---cc-cccc
Confidence 334567778999998 67789999999988 679999996 443343331 3343211111110 11 11 1123
Q ss_pred CccEEEeCCC-----h----hhHHHHHHhhhcCCeEEEEcc
Q 019012 227 GIDIYFDNVG-----G----EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 227 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 258 (347)
++|+++-..- . ..++++.+.|+++|+++.+..
T Consensus 147 ~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 147 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 6888874322 1 146788999999999998865
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.08 E-value=0.83 Score=36.75 Aligned_cols=103 Identities=12% Similarity=0.057 Sum_probs=59.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHH----C-C--CEEEEEECChHhHHHHHHHcCC----C-eeeecCCH--HHHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKL----H-G--CYVVGSAGSSQKVDLLKNKLGF----D-EAFNYNDE--TDLVAA 219 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~----~-G--~~V~~~~~~~~~~~~~~~~~g~----~-~vi~~~~~--~~~~~~ 219 (347)
..++.-+||=.|+ +.|..+..+++. . + .++++++.++...+.+++.+.- . ..++.... +++...
T Consensus 37 ~~~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (280)
T d1jqea_ 37 DTKSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSR 114 (280)
T ss_dssp TTCSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHH
T ss_pred cCCCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcch
Confidence 3445557998885 344444444433 2 3 3688999998888887743321 1 12222221 122222
Q ss_pred HHHHC-CCCccEEEeCCC-----h--hhHHHHHHhhhcCCeEEEEcc
Q 019012 220 LKRCF-PQGIDIYFDNVG-----G--EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 220 i~~~~-~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 258 (347)
..... .+.||+|+-.-. . ..++.+.++|+++|.++....
T Consensus 115 ~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~ 161 (280)
T d1jqea_ 115 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV 161 (280)
T ss_dssp HTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence 22222 237999986443 1 378889999999998887654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=88.05 E-value=0.32 Score=40.30 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 158 GEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 158 ~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.+.|+|+|| |..|+.++..+...|.+|++...++.
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 578999996 99999999999888999999997653
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.03 E-value=2.1 Score=30.79 Aligned_cols=38 Identities=26% Similarity=0.188 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECChHh
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSSQK 194 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~~~ 194 (347)
..+.+|-|.|+ |.+|..++..+...|. +++..+..+++
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~ 43 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK 43 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence 34678999996 9999888887777665 89999988765
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=87.94 E-value=0.21 Score=36.41 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=49.6
Q ss_pred EEcCCchHHHHHHHHHHHCCCE-EEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCChhhHH
Q 019012 163 VSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGGEMLD 241 (347)
Q Consensus 163 I~Ga~g~~G~~ai~la~~~G~~-V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~ 241 (347)
+.| +|.+|.+.+..++. +.+ +.+..++.++.+.+.+..+. ...+..+- -...|+||-|+..+.+.
T Consensus 4 fIG-~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~~~~-----------~~~~DiVil~v~d~~i~ 69 (153)
T d2i76a2 4 FVG-TGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGG-KAATLEKH-----------PELNGVVFVIVPDRYIK 69 (153)
T ss_dssp EES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCC-----------CC---CEEECSCTTTHH
T ss_pred EEe-CcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccc-cccchhhh-----------hccCcEEEEeccchhhh
Confidence 567 49999988776654 444 45788899998888834443 22222210 12479999999888888
Q ss_pred HHHHhhhcCCe-EEEEc
Q 019012 242 AALLNMRDHGR-IAVCG 257 (347)
Q Consensus 242 ~~~~~l~~~G~-~v~~g 257 (347)
.....++..++ ++.+.
T Consensus 70 ~v~~~l~~~~~ivi~~s 86 (153)
T d2i76a2 70 TVANHLNLGDAVLVHCS 86 (153)
T ss_dssp HHHTTTCCSSCCEEECC
T ss_pred HHHhhhcccceeeeecc
Confidence 88888875444 44443
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.94 E-value=1.1 Score=31.51 Aligned_cols=61 Identities=16% Similarity=0.192 Sum_probs=47.9
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
..+++..-+.+++.-..-..-+.+.++++.+|. ++++...+++..+.++ ++|++.++++..
T Consensus 59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~~ 120 (132)
T d1lssa_ 59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPEL 120 (132)
T ss_dssp HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHHH
T ss_pred hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHHH
Confidence 456777777777654445567788899999998 7888888888888888 999999987653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.87 E-value=0.3 Score=39.09 Aligned_cols=32 Identities=22% Similarity=0.154 Sum_probs=28.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
.|+|.|| |..|++++.+++..|. +|++..+++
T Consensus 3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 5899997 9999999999999997 888888765
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=87.42 E-value=0.95 Score=35.79 Aligned_cols=95 Identities=13% Similarity=0.084 Sum_probs=58.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHH---cCCC-eeeecCCHHHHHHHHHH-H-CCCCc
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFD-EAFNYNDETDLVAALKR-C-FPQGI 228 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~---~g~~-~vi~~~~~~~~~~~i~~-~-~~g~~ 228 (347)
++++++||=+|+ | .|..+..+++.-..+|++++.|++..+.++++ .+.. .+.-... +. ... . ..+.|
T Consensus 22 ~~~~~~VLDlGC-G-~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~--D~---~~~~~~~~~~f 94 (252)
T d1ri5a_ 22 TKRGDSVLDLGC-G-KGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ--DS---YGRHMDLGKEF 94 (252)
T ss_dssp CCTTCEEEEETC-T-TTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES--CT---TTSCCCCSSCE
T ss_pred CCCcCEEEEecc-c-CcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc--ch---hhhcccccccc
Confidence 578999999995 3 36667777776445899999999988888633 2321 1110010 10 001 1 12369
Q ss_pred cEEEeCCCh-----------hhHHHHHHhhhcCCeEEEE
Q 019012 229 DIYFDNVGG-----------EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 229 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 256 (347)
|+|+-.-.- ..+..+.+.|+++|+++..
T Consensus 95 D~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 95 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 999754331 1456677889999998764
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.40 E-value=0.37 Score=34.85 Aligned_cols=88 Identities=13% Similarity=-0.036 Sum_probs=49.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHC---CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH---GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~---G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|.|.||+|-+|+-.++++..+ ..++....++....+.+. ..+.+..+.. +......+.|++|-|.+
T Consensus 4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~~~~~~~---------~~~~~~~~~d~vf~a~p 73 (144)
T d2hjsa1 4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRVGD---------VDSFDFSSVGLAFFAAA 73 (144)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEECEE---------GGGCCGGGCSEEEECSC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccccchhcc---------chhhhhccceEEEecCC
Confidence 5899999999999999999644 347776665433222111 1111111100 00111126899999999
Q ss_pred hhhHHHHHH-hhhcCCeEEEEc
Q 019012 237 GEMLDAALL-NMRDHGRIAVCG 257 (347)
Q Consensus 237 ~~~~~~~~~-~l~~~G~~v~~g 257 (347)
......... ....+.+++..+
T Consensus 74 ~~~s~~~~~~~~~~g~~VID~S 95 (144)
T d2hjsa1 74 AEVSRAHAERARAAGCSVIDLS 95 (144)
T ss_dssp HHHHHHHHHHHHHTTCEEEETT
T ss_pred cchhhhhccccccCCceEEeec
Confidence 865554444 444555665543
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.40 E-value=0.3 Score=40.74 Aligned_cols=92 Identities=26% Similarity=0.207 Sum_probs=52.2
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHH---HcCCC---eeeecCCHHHHHHHHHHHCC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKN---KLGFD---EAFNYNDETDLVAALKRCFP 225 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~---~~g~~---~vi~~~~~~~~~~~i~~~~~ 225 (347)
....+|++||-+|+ | .|..++.+|+ .|+ +|++++.++. ...+++ +.+.. .++..+.. ++ .+..
T Consensus 34 ~~~~~~~~VLDlGc-G-tG~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~ 103 (328)
T d1g6q1_ 34 KDLFKDKIVLDVGC-G-TGILSMFAAK-HGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF 103 (328)
T ss_dssp HHHHTTCEEEEETC-T-TSHHHHHHHH-TCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred cccCCcCEEEEeCC-C-CCHHHHHHHH-hCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence 34567899999995 3 5666665555 577 8999998863 233321 34442 22322221 11 1112
Q ss_pred CCccEEEeCCC-----hh-----hHHHHHHhhhcCCeEE
Q 019012 226 QGIDIYFDNVG-----GE-----MLDAALLNMRDHGRIA 254 (347)
Q Consensus 226 g~~d~vid~~g-----~~-----~~~~~~~~l~~~G~~v 254 (347)
+.+|+++...- .+ .+...-+.|+|+|+++
T Consensus 104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 37999875322 11 2333447899999874
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.33 E-value=0.37 Score=39.75 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=31.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
++..+|+|+|| |..|+.|+..+...|.+|++...++
T Consensus 3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45567999997 9999999999999999999988654
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.32 E-value=6.2 Score=32.10 Aligned_cols=107 Identities=15% Similarity=0.127 Sum_probs=68.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---ChHhHHHHHHHcCCCeeeecCC---------------
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---SSQKVDLLKNKLGFDEAFNYND--------------- 212 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---~~~~~~~~~~~~g~~~vi~~~~--------------- 212 (347)
....++.+...+|...+|..|++.+..++.+|.+++++.. +..+.+.++ .+|+.-++....
T Consensus 57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~ 135 (320)
T d1z7wa1 57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILA 135 (320)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHH
Confidence 3455666666677766899999999999999996555543 345778888 899853321110
Q ss_pred -------------H-------HHHHHHHHHHCCCCccEEEeCCCh-hh---HHHHHHhhhcCCeEEEEcc
Q 019012 213 -------------E-------TDLVAALKRCFPQGIDIYFDNVGG-EM---LDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 213 -------------~-------~~~~~~i~~~~~g~~d~vid~~g~-~~---~~~~~~~l~~~G~~v~~g~ 258 (347)
+ .....+|.+...+.+|.++-++|+ .. +...++...+.-+++-+..
T Consensus 136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~ 205 (320)
T d1z7wa1 136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP 205 (320)
T ss_dssp HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence 0 012233444444578999988885 33 3455566666777766553
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=87.06 E-value=0.42 Score=38.60 Aligned_cols=62 Identities=10% Similarity=0.221 Sum_probs=39.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|||+||+|-+|...+..+...| ++++++.... .+ ..|..+.+.+.+.+++. ++|+||.+++
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~-------~~----~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa 63 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSK-------EF----CGDFSNPKGVAETVRKL---RPDVIVNAAA 63 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCS-------SS----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCc-------cc----cCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence 59999999999999888777666 4555554322 11 12333332344444432 5899999886
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=87.00 E-value=0.28 Score=36.69 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=27.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
-|+|+|| |+.|+.++..+...|.+|+++.+
T Consensus 3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~ 32 (184)
T d1fl2a1 3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGE 32 (184)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred cEEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence 4889997 99999999999999999999875
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.81 E-value=0.36 Score=40.27 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=29.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 190 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~ 190 (347)
++|||+||+|-+|...+..+...|.+|+++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~ 34 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 68999999999999999999889999999863
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=86.55 E-value=0.41 Score=35.39 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEECCh
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGC--YVVGSAGSS 192 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~--~V~~~~~~~ 192 (347)
.|++|+|.|| |..|+.+++.++.++. +|+++..++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4789999997 9999999888888774 788887655
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=86.37 E-value=0.3 Score=37.77 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=27.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
-|+|+|| |+.|+.++..+..+|.+|++++..
T Consensus 5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~ 35 (221)
T d1dxla1 5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR 35 (221)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence 3789997 999999999999999999999864
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=86.33 E-value=1.7 Score=31.28 Aligned_cols=39 Identities=21% Similarity=0.138 Sum_probs=30.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 199 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~ 199 (347)
+|-|+| .|.+|.+.+.-+...|.+|++..+...+.....
T Consensus 2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~ 40 (152)
T d1i36a2 2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER 40 (152)
T ss_dssp EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence 477888 599999999999889999988876665444333
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=86.14 E-value=2.3 Score=32.10 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=63.2
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHc---CCC-eeeecCCHHHHHHHHHHHCCC
Q 019012 152 VCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKL---GFD-EAFNYNDETDLVAALKRCFPQ 226 (347)
Q Consensus 152 ~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~---g~~-~vi~~~~~~~~~~~i~~~~~g 226 (347)
...+++++.+ |-. +-|.|-.+-.+++.. +.+|++++.+++..+.+++.+ +.. ..+..+-. ++...+.....+
T Consensus 18 ~l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~~ 94 (192)
T d1m6ya2 18 FLKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGIE 94 (192)
T ss_dssp HHCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTCS
T ss_pred hhCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCCC
Confidence 3456778755 333 344454455555555 569999999999888887433 321 23333322 444455555445
Q ss_pred CccEE-EeCCC-h--------------hhHHHHHHhhhcCCeEEEEccc
Q 019012 227 GIDIY-FDNVG-G--------------EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 227 ~~d~v-id~~g-~--------------~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
.+|.+ +|.-- + +.+..+.+.|.++|+++.+...
T Consensus 95 ~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~ 143 (192)
T d1m6ya2 95 KVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH 143 (192)
T ss_dssp CEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred CcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence 78876 45211 1 1456677788899999887653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=86.02 E-value=0.31 Score=38.48 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=27.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
|+|.|| |+.|++++..+...|.+|++++..+.
T Consensus 5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 789997 99999888888888999999997653
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=85.98 E-value=0.2 Score=38.07 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
++..|+|.|| |+.|+.++..+...|.+|+++.+.
T Consensus 4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence 4567999997 999999999999999999998754
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=85.98 E-value=3.2 Score=30.06 Aligned_cols=87 Identities=11% Similarity=0.011 Sum_probs=54.3
Q ss_pred EEEEEcCCchHHHH-HHHHHHHC-CCEEEEEE-CChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCC
Q 019012 160 YVFVSAASGAVGQL-VGQLAKLH-GCYVVGSA-GSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVG 236 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~-ai~la~~~-G~~V~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g 236 (347)
+|.|.|. |.+|.- .+...+.. ++++++++ +++++.+.+.+++++.. .+ ++. .+. ..+|+|+-|+.
T Consensus 3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~-----~~~-~l~----~~~D~V~I~tp 70 (164)
T d1tlta1 3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD-----SLS-SLA----ASCDAVFVHSS 70 (164)
T ss_dssp EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS-----SHH-HHH----TTCSEEEECSC
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc-----cch-hhh----hhccccccccc
Confidence 5789995 999864 56666555 67877665 44555555544777642 21 111 121 24899999887
Q ss_pred h-hhHHHHHHhhhcCCeEEEEccc
Q 019012 237 G-EMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 237 ~-~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
. .+.+.+..++..+ +-|++..+
T Consensus 71 ~~~h~~~~~~al~~g-k~V~~EKP 93 (164)
T d1tlta1 71 TASHFDVVSTLLNAG-VHVCVDKP 93 (164)
T ss_dssp TTHHHHHHHHHHHTT-CEEEEESS
T ss_pred chhcccccccccccc-ceeecccc
Confidence 5 4677777777765 55666543
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=85.92 E-value=0.32 Score=38.72 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=28.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.|+|.|| |+.|++++..+...|.+|++++..+.
T Consensus 6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3889997 99999988888888999999998764
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.61 E-value=0.63 Score=33.95 Aligned_cols=36 Identities=19% Similarity=-0.008 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
.-+++|+|+|| |.+|.-++..+..+|+ .|+++.+.+
T Consensus 43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 34678999997 9999999999999999 688887654
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=85.56 E-value=3.5 Score=30.39 Aligned_cols=99 Identities=10% Similarity=0.048 Sum_probs=57.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHC----CCEEEEEEC--ChHhHHHHHHHcCCC--------------eeeecCCHH-HHHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH----GCYVVGSAG--SSQKVDLLKNKLGFD--------------EAFNYNDET-DLVA 218 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~----G~~V~~~~~--~~~~~~~~~~~~g~~--------------~vi~~~~~~-~~~~ 218 (347)
+|.|.| -|-+|+++...+... ..+|+++-. +.+.+.++- ++.-. .+++.+.-. .-..
T Consensus 3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~ 80 (173)
T d1obfo1 3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (173)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence 478888 699999998876542 346766663 333445554 33210 011100000 0000
Q ss_pred HHHHHCCC--CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccc
Q 019012 219 ALKRCFPQ--GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 219 ~i~~~~~g--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
...++..+ ++|+|+||+|. ...+.+...|..+-+-|.+..+.
T Consensus 81 ~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~ 125 (173)
T d1obfo1 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (173)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred CHHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence 12233333 79999999996 56778888888887777776543
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.18 E-value=0.19 Score=40.04 Aligned_cols=45 Identities=11% Similarity=-0.095 Sum_probs=31.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN 200 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~ 200 (347)
...+|.+||=+|+ | .|..++.++...+.+|++++.|+...+.+++
T Consensus 48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~ 92 (257)
T d2a14a1 48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEK 92 (257)
T ss_dssp TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence 4467889999885 4 3544445555434489999999998888873
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=85.16 E-value=0.38 Score=37.90 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=27.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC-EEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~ 192 (347)
.|+|+|| |..|+.++..+...|. +|++...++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 4899997 9999999999988997 699988754
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=85.01 E-value=0.97 Score=33.49 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=59.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECC---hHhHHHHHHHcCCC-----e---------eeecCCHHHH--HHHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS---SQKVDLLKNKLGFD-----E---------AFNYNDETDL--VAAL 220 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~---~~~~~~~~~~~g~~-----~---------vi~~~~~~~~--~~~i 220 (347)
+|-|.| -|-+|+++...+...+.+|+++-.. .+...++- ++.-. . .++.+.- .+ ....
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I-~~~~~~~p 78 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKI-TVFNEMKP 78 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEE-EEECCSSG
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEE-EEEecCCh
Confidence 477888 6999999999888778887777542 34556655 43210 0 1111000 00 0001
Q ss_pred HHHCCC--CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccc
Q 019012 221 KRCFPQ--GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 221 ~~~~~g--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
.++..+ ++|+||||+|. ...+.+...+..+-+-|.+..+.
T Consensus 79 ~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~ 121 (169)
T d1dssg1 79 ENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS 121 (169)
T ss_dssp GGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred HHCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence 121112 79999999996 56778888888887777776543
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=84.69 E-value=0.44 Score=36.69 Aligned_cols=30 Identities=13% Similarity=-0.005 Sum_probs=27.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
|+|+|| |+.|+.++..|..+|.+|.++...
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 789997 999999999999999999999864
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=84.60 E-value=0.33 Score=39.18 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=28.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
+|+|+|| |..|+.++..+...|.+|++...++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4899997 9999999999999999999998753
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.44 E-value=0.41 Score=35.72 Aligned_cols=34 Identities=15% Similarity=0.031 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
.+++|+|.|| |.+|.-++..++.+|.++.++...
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence 4789999997 999999999999999865555433
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=84.29 E-value=5.8 Score=32.10 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=38.9
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEC---ChHhHHHHHHHcCCCee
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAG---SSQKVDLLKNKLGFDEA 207 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~---~~~~~~~~~~~~g~~~v 207 (347)
+...+.++..|+... +|..|+++...++.+|.+++++.. +..+...++ .+|+..+
T Consensus 54 ~~g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~vv 111 (310)
T d1y7la1 54 KDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNLV 111 (310)
T ss_dssp HTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEEE
T ss_pred HcCCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCceE
Confidence 345567777666655 699999999999999996544443 334667777 8888543
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.13 E-value=0.47 Score=36.94 Aligned_cols=31 Identities=19% Similarity=0.233 Sum_probs=27.7
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
|+|+|| |..|+.++..+...|.+|+++..++
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 789996 9999998888888899999999865
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=84.00 E-value=0.56 Score=36.51 Aligned_cols=32 Identities=22% Similarity=0.032 Sum_probs=28.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
-|+|+|+ |+.|+.++..|...|.+|+++...+
T Consensus 8 DviIIG~-GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGG-GPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 3789996 9999999999999999999998654
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=83.90 E-value=0.56 Score=36.06 Aligned_cols=30 Identities=23% Similarity=0.134 Sum_probs=27.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
++|+|| |+.|+.++..|...|.+|+++...
T Consensus 6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG 35 (223)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence 788896 999999999999999999999865
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=83.86 E-value=2.9 Score=30.75 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=58.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEC---ChHhHHHHHHHcCCCe--------------eeecCCHHHH--HHH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAG---SSQKVDLLKNKLGFDE--------------AFNYNDETDL--VAA 219 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~---~~~~~~~~~~~~g~~~--------------vi~~~~~~~~--~~~ 219 (347)
+|.|.| -|-+|+++...+... ..+++++-. +.+...++- ++.-.+ .++.+.- .+ ...
T Consensus 3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I-~~~~~~~ 79 (169)
T d1u8fo1 3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPI-TIFQERD 79 (169)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEE-EEECCSS
T ss_pred EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEE-EEEECCC
Confidence 578999 699999999877655 468877754 234556665 432110 1110000 00 001
Q ss_pred HHHHCCC--CccEEEeCCCh-hhHHHHHHhhhcCCeEEEEcccc
Q 019012 220 LKRCFPQ--GIDIYFDNVGG-EMLDAALLNMRDHGRIAVCGMVS 260 (347)
Q Consensus 220 i~~~~~g--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 260 (347)
..++..+ ++|+|+||+|. ...+.+...+..+-+-|.+..+.
T Consensus 80 p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~ 123 (169)
T d1u8fo1 80 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS 123 (169)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred hhhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence 2233333 79999999996 46667777888887777776543
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=83.68 E-value=4.4 Score=30.55 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=45.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCcc
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d 229 (347)
...++ .|++||=.|+ | .|..++. +...|+ +|+.++.+++..+.+++......++..+- .+ ..+.||
T Consensus 43 ~~~dl-~Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~--------~~-l~~~fD 109 (197)
T d1ne2a_ 43 NDGNI-GGRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV--------SE-ISGKYD 109 (197)
T ss_dssp HHTSS-BTSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG--------GG-CCCCEE
T ss_pred HcCCC-CCCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEeh--------hh-cCCcce
Confidence 44555 5899999985 3 3555554 444576 89999999998888883333233443321 11 235799
Q ss_pred EEEeC
Q 019012 230 IYFDN 234 (347)
Q Consensus 230 ~vid~ 234 (347)
+||-.
T Consensus 110 ~Vi~N 114 (197)
T d1ne2a_ 110 TWIMN 114 (197)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99864
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.65 E-value=3.6 Score=33.06 Aligned_cols=100 Identities=18% Similarity=0.269 Sum_probs=58.5
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHH---HcCCCeee-ecCCHHHHHHHHHHHCCCC
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKN---KLGFDEAF-NYNDETDLVAALKRCFPQG 227 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~---~~g~~~vi-~~~~~~~~~~~i~~~~~g~ 227 (347)
...++|++||=..| ++=|. +++++... +.+|++.+.+..|...+++ ++|+..++ ...+. .. ......+.
T Consensus 98 L~~~~g~~vLD~CA-aPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~---~~~~~~~~ 171 (284)
T d1sqga2 98 LAPQNGEHILDLCA-APGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YP---SQWCGEQQ 171 (284)
T ss_dssp HCCCTTCEEEEESC-TTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CT---HHHHTTCC
T ss_pred cCccccceeEeccC-ccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-cc---chhccccc
Confidence 46788999887653 33333 23444444 3589999999998766642 56775332 22221 11 11122246
Q ss_pred ccEEE-e--CCChh--------------------------hHHHHHHhhhcCCeEEEEcc
Q 019012 228 IDIYF-D--NVGGE--------------------------MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 228 ~d~vi-d--~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~ 258 (347)
||.|| | |+|.. .+..+++.+++||++|+...
T Consensus 172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC 231 (284)
T d1sqga2 172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 231 (284)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence 88775 5 66532 12446667889999887654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.62 E-value=0.76 Score=34.15 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHH-Hc--CCCeee---ecCCHHHHHHHHHHHCCCCcc
Q 019012 156 KSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN-KL--GFDEAF---NYNDETDLVAALKRCFPQGID 229 (347)
Q Consensus 156 ~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~-~~--g~~~vi---~~~~~~~~~~~i~~~~~g~~d 229 (347)
-.|++++|.|-+.-+|.=...++...|+.|+.+...... .+.+. .+ -...+- .+... .+.+.+++ .|
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~lk~~~~~-----aD 99 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ-KFTRGESLKLNKHHVEDLGEYSED-LLKKCSLD-----SD 99 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE-EEESCCCSSCCCCEEEEEEECCHH-HHHHHHHH-----CS
T ss_pred CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc-ccccccceeeeeeccccccccchh-HHhhcccc-----CC
Confidence 568999999987889998888888899999876644221 10000 00 011111 12222 34444443 89
Q ss_pred EEEeCCChhhHHHHHHhhhcCCeEEEEccc
Q 019012 230 IYFDNVGGEMLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 230 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 259 (347)
+++.++|...+.---+++++|..++.+|..
T Consensus 100 IvIsavG~p~~~i~~d~ik~GavvIDvGi~ 129 (171)
T d1edza1 100 VVITGVPSENYKFPTEYIKEGAVCINFACT 129 (171)
T ss_dssp EEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred EEEEccCCCccccChhhcccCceEeecccc
Confidence 999999976543344577888888888864
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=83.09 E-value=1.1 Score=36.95 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=59.7
Q ss_pred cCCCCCCEEEEEcC-CchHHHHHHHHHHHCCC-EEEEEECChHhHHHHHHHc---CCC----eeeecCCHHHHHHHHHHH
Q 019012 153 CSPKSGEYVFVSAA-SGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKL---GFD----EAFNYNDETDLVAALKRC 223 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga-~g~~G~~ai~la~~~G~-~V~~~~~~~~~~~~~~~~~---g~~----~vi~~~~~~~~~~~i~~~ 223 (347)
..+.+|++||=..+ +|++++ ..+ ..|+ +|+.++.++...+.+++.+ |.+ .++..+.. ++.+...+
T Consensus 140 ~~~~~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~-~~l~~~~~- 213 (317)
T d2b78a2 140 NGSAAGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF-DYFKYARR- 213 (317)
T ss_dssp HTTTBTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH-HHHHHHHH-
T ss_pred HHhhCCCceeecCCCCcHHHH---HHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH-HHHHHHHh-
Confidence 45678999986653 444443 333 4577 8999999998777776322 332 23333222 33232222
Q ss_pred CCCCccEEEe---CCC-h------------hhHHHHHHhhhcCCeEEEEcc
Q 019012 224 FPQGIDIYFD---NVG-G------------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 224 ~~g~~d~vid---~~g-~------------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
.++.||+||- +.+ + +.+..++++|+++|.++....
T Consensus 214 ~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc 264 (317)
T d2b78a2 214 HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 264 (317)
T ss_dssp TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1237999873 111 0 245678889999999988654
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=83.05 E-value=0.54 Score=38.55 Aligned_cols=32 Identities=22% Similarity=0.044 Sum_probs=28.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
.|+|+|| |..|++++..++..|.+|++.+..+
T Consensus 9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 5899997 9999999999999999999998754
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.99 E-value=0.59 Score=36.21 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=27.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
-|+|+|+ |+.|+.|+..|...|.+|++++..+
T Consensus 7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 4789996 9999999888888999999998653
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=82.86 E-value=1.5 Score=34.33 Aligned_cols=36 Identities=31% Similarity=0.302 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHH-HHCCCEEEEEECC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLA-KLHGCYVVGSAGS 191 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la-~~~G~~V~~~~~~ 191 (347)
--++.+|+|.| .|.+|..+++++ +..|++|++++.+
T Consensus 28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~ 64 (234)
T d1b26a1 28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS 64 (234)
T ss_dssp CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence 34689999999 599999999887 5679999888743
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=82.78 E-value=0.4 Score=39.34 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=28.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
++|||+||+|-+|...+..+...|..|+++...
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~ 35 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR 35 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence 479999999999999999998889988776543
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.52 E-value=0.52 Score=36.41 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=27.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
.++|+|| |+.|+.++..|..+|.+|+++...
T Consensus 7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 3789996 999999999999999999999864
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=82.27 E-value=8.2 Score=31.42 Aligned_cols=111 Identities=17% Similarity=0.141 Sum_probs=65.9
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC---hHhHHHHHHHcCCCeeeecCCH--------
Q 019012 145 AYAGFHEVCSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS---SQKVDLLKNKLGFDEAFNYNDE-------- 213 (347)
Q Consensus 145 a~~al~~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~---~~~~~~~~~~~g~~~vi~~~~~-------- 213 (347)
|++.+.....-.+..+|+... +|..|.+++..++..|.+++++... ..+.+.++ .+|+.-+......
T Consensus 62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~ 139 (331)
T d1tdja1 62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI 139 (331)
T ss_dssp HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence 444453333223444455544 6899999999999999976655543 35677777 8888533321111
Q ss_pred -----------------------HHHHHHHHHHCCCCccEEEeCCCh-h---hHHHHHHhhhcCCeEEEEcc
Q 019012 214 -----------------------TDLVAALKRCFPQGIDIYFDNVGG-E---MLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 214 -----------------------~~~~~~i~~~~~g~~d~vid~~g~-~---~~~~~~~~l~~~G~~v~~g~ 258 (347)
.....++.+.. +.+|.+|-++|+ . .+...++.+.+..+++.+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~ 210 (331)
T d1tdja1 140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA 210 (331)
T ss_dssp HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred hhhhcCCCccccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence 01222233222 358999998885 3 34556666677788877753
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=81.94 E-value=3.2 Score=30.38 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=53.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeCCCh-
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDNVGG- 237 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~-G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~~g~- 237 (347)
+|.|+|. |.+|...+..++.. ++++++++....+ ......+..+.+. ... ...+|+|+.|+..
T Consensus 5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~~-------~~~-~~~~D~Vvi~tp~~ 69 (170)
T d1f06a1 5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVADV-------DKH-ADDVDVLFLCMGSA 69 (170)
T ss_dssp EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGGG-------GGT-TTTCSEEEECSCTT
T ss_pred eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchhh-------hhh-ccccceEEEeCCCc
Confidence 5889994 99999888877766 5677766654332 1111222222221 111 1259999999986
Q ss_pred hhHHHHHHhhhcCCeEEEE
Q 019012 238 EMLDAALLNMRDHGRIAVC 256 (347)
Q Consensus 238 ~~~~~~~~~l~~~G~~v~~ 256 (347)
.+.+.+.++|..|-.++..
T Consensus 70 ~h~~~a~~aL~aG~~vv~~ 88 (170)
T d1f06a1 70 TDIPEQAPKFAQFACTVDT 88 (170)
T ss_dssp THHHHHHHHHTTTSEEECC
T ss_pred ccHHHHHHHHHCCCcEEEe
Confidence 5788999999998887753
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.87 E-value=0.8 Score=35.15 Aligned_cols=30 Identities=17% Similarity=0.105 Sum_probs=27.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
++|+|+ |+.|+.++..|..+|.+|.++...
T Consensus 6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGG-GSGGLASARRAAELGARAAVVESH 35 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 688896 999999999999999999999854
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=81.77 E-value=5.6 Score=30.75 Aligned_cols=95 Identities=12% Similarity=-0.032 Sum_probs=58.2
Q ss_pred CEEEEEcCCch----HHHHHHHHHHHC--CCEEEEEE-CChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEE
Q 019012 159 EYVFVSAASGA----VGQLVGQLAKLH--GCYVVGSA-GSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIY 231 (347)
Q Consensus 159 ~~vLI~Ga~g~----~G~~ai~la~~~--G~~V~~~~-~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~v 231 (347)
=+|.|.|. |. ++...+...+.. ++++++++ ++.++.+.+.++++....-.+.+ +.+.+. ...+|+|
T Consensus 17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~---~~~iD~V 89 (237)
T d2nvwa1 17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDS---LESFAQ---YKDIDMI 89 (237)
T ss_dssp EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESC---HHHHHH---CTTCSEE
T ss_pred eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecc---hhhccc---cccccee
Confidence 47889996 54 444444444443 56888655 45555555544787654433443 232332 2369999
Q ss_pred EeCCCh-hhHHHHHHhhhcC-----CeEEEEcccc
Q 019012 232 FDNVGG-EMLDAALLNMRDH-----GRIAVCGMVS 260 (347)
Q Consensus 232 id~~g~-~~~~~~~~~l~~~-----G~~v~~g~~~ 260 (347)
+-|+.. .+.+.+..+|..| ++-|++..+-
T Consensus 90 ~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl 124 (237)
T d2nvwa1 90 VVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 124 (237)
T ss_dssp EECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred eccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence 999986 4777888888765 5667776543
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.77 E-value=0.69 Score=38.16 Aligned_cols=31 Identities=26% Similarity=0.252 Sum_probs=27.6
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
|+|+|| |..|++++..++..|.+|++...++
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789996 9999999999999999999998654
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=81.73 E-value=1.9 Score=30.98 Aligned_cols=87 Identities=20% Similarity=0.128 Sum_probs=49.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHC----CCEEEEEECChHhHHHHHHHcCCCee--eecCCHHHHHHHHHHHCCCCccEEEe
Q 019012 160 YVFVSAASGAVGQLVGQLAKLH----GCYVVGSAGSSQKVDLLKNKLGFDEA--FNYNDETDLVAALKRCFPQGIDIYFD 233 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~----G~~V~~~~~~~~~~~~~~~~~g~~~v--i~~~~~~~~~~~i~~~~~g~~d~vid 233 (347)
+|.|.||+|-+|+-.++++..+ ..++...+++....... .++-... ....+. ..+ ..+|++|-
T Consensus 2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~--~~~~~~~~~~~~~~~----~~~-----~~~DvvF~ 70 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP--NFGKDAGMLHDAFDI----ESL-----KQLDAVIT 70 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC--CSSSCCCBCEETTCH----HHH-----TTCSEEEE
T ss_pred EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc--ccCCcceeeecccch----hhh-----ccccEEEE
Confidence 5889999999999999865432 35776666543221111 1221111 111111 111 25899999
Q ss_pred CCChhhHHHHHHhhhcCC-e--EEEEc
Q 019012 234 NVGGEMLDAALLNMRDHG-R--IAVCG 257 (347)
Q Consensus 234 ~~g~~~~~~~~~~l~~~G-~--~v~~g 257 (347)
|++++........+...| + ++...
T Consensus 71 alp~~~s~~~~~~l~~~g~~~~VIDlS 97 (147)
T d1mb4a1 71 CQGGSYTEKVYPALRQAGWKGYWIDAA 97 (147)
T ss_dssp CSCHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred ecCchHHHHHhHHHHHcCCceEEEeCC
Confidence 999876666666555544 2 55543
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.55 E-value=0.7 Score=37.01 Aligned_cols=47 Identities=15% Similarity=-0.102 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHc
Q 019012 154 SPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 202 (347)
Q Consensus 154 ~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~ 202 (347)
+...|.++|=+|+ |+ |...+..+...+.+|++++.++.-.+.+++.+
T Consensus 51 g~~~g~~vLDiGc-G~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~ 97 (263)
T d2g72a1 51 GEVSGRTLIDIGS-GP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWL 97 (263)
T ss_dssp SCSCCSEEEEETC-TT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEecc-CC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHH
Confidence 4567899999996 43 44444445455669999999999888887434
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.12 E-value=0.53 Score=38.50 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=28.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECChH
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 193 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~ 193 (347)
.|+|+|| |..|+.++..+...|.+|+++..++.
T Consensus 3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4899997 99999999999888999999997653
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=81.11 E-value=8.5 Score=28.41 Aligned_cols=102 Identities=21% Similarity=0.248 Sum_probs=63.8
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCC--eeeecCCHHHHHHHHHHHCCCCccE
Q 019012 153 CSPKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD--EAFNYNDETDLVAALKRCFPQGIDI 230 (347)
Q Consensus 153 ~~~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~i~~~~~g~~d~ 230 (347)
..+++|.. +|-+..|+=|+ ...+++. +.+|++++++++....++ ..-.. ..+..+-. ++.+.+.....+.+|.
T Consensus 14 l~~~~g~~-~vD~T~G~GGh-s~~iL~~-~~~viaiD~D~~ai~~a~-~~~~~~~~~~~~~f~-~~~~~l~~~~~~~vdg 88 (182)
T d1wg8a2 14 LAVRPGGV-YVDATLGGAGH-ARGILER-GGRVIGLDQDPEAVARAK-GLHLPGLTVVQGNFR-HLKRHLAALGVERVDG 88 (182)
T ss_dssp HTCCTTCE-EEETTCTTSHH-HHHHHHT-TCEEEEEESCHHHHHHHH-HTCCTTEEEEESCGG-GHHHHHHHTTCSCEEE
T ss_pred cCCCCCCE-EEEeCCCCcHH-HHHHhcc-cCcEEEEhhhhhHHHHHh-hccccceeEeehHHH-HHHHHHHHcCCCccCE
Confidence 35677775 45554455554 4445554 569999999999888888 44322 23444432 5555555544447887
Q ss_pred EEeCCCh-h---------------hHHHHHHhhhcCCeEEEEccc
Q 019012 231 YFDNVGG-E---------------MLDAALLNMRDHGRIAVCGMV 259 (347)
Q Consensus 231 vid~~g~-~---------------~~~~~~~~l~~~G~~v~~g~~ 259 (347)
++==.|- . .++.+++.+.++|+++.+...
T Consensus 89 Il~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fh 133 (182)
T d1wg8a2 89 ILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFH 133 (182)
T ss_dssp EEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred EEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecc
Confidence 7532331 1 357778889999999887653
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=81.09 E-value=3.2 Score=30.73 Aligned_cols=88 Identities=15% Similarity=0.077 Sum_probs=50.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEECChHhHHHHHHHcC----CCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHG-CYVVGSAGSSQKVDLLKNKLG----FDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G-~~V~~~~~~~~~~~~~~~~~g----~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+|-|.||+|-+|+-.++++..+- .++..+.++...-+.+. +.. ....+...+. ..... ..|++|-|
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~-~~~p~~~~~~~~~~~~~---~~~~~-----~~dvvf~a 73 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLE-EIFPSTLENSILSEFDP---EKVSK-----NCDVLFTA 73 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHH-HHCGGGCCCCBCBCCCH---HHHHH-----HCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCccc-ccCchhhccccccccCH---hHhcc-----ccceEEEc
Confidence 58899999999999999998874 47776665543323332 211 1112222221 11111 38999999
Q ss_pred CChhhHHHHHHhhhcCCeEEEEc
Q 019012 235 VGGEMLDAALLNMRDHGRIAVCG 257 (347)
Q Consensus 235 ~g~~~~~~~~~~l~~~G~~v~~g 257 (347)
.+........... .+-+++..+
T Consensus 74 ~p~~~s~~~~~~~-~~~~VIDlS 95 (176)
T d1vkna1 74 LPAGASYDLVREL-KGVKIIDLG 95 (176)
T ss_dssp CSTTHHHHHHTTC-CSCEEEESS
T ss_pred cccHHHHHHHHhh-ccceEEecC
Confidence 9876544333332 345555443
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.90 E-value=0.7 Score=34.87 Aligned_cols=32 Identities=9% Similarity=-0.002 Sum_probs=27.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 159 EYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 159 ~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
..|+|.|| |+.|+.++..+...|.+|+++...
T Consensus 6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW 37 (192)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence 57999997 999999998888899999888743
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=80.80 E-value=0.59 Score=38.73 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=25.8
Q ss_pred EEEEEcCCchHHHHHHHHH-----HHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLA-----KLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la-----~~~G~~V~~~~~~~ 192 (347)
-|+|.|| |..|++++.++ +..|.+|+++++++
T Consensus 9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45 (360)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence 4899997 99998877666 35799999998754
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=80.80 E-value=1.2 Score=30.39 Aligned_cols=35 Identities=9% Similarity=-0.002 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEECCh
Q 019012 157 SGEYVFVSAASGAVGQLVGQLAKLH---GCYVVGSAGSS 192 (347)
Q Consensus 157 ~~~~vLI~Ga~g~~G~~ai~la~~~---G~~V~~~~~~~ 192 (347)
.+++++|.|| |.+|.-.++++..+ |.+|+++.+++
T Consensus 17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 3579999997 99998777765443 78999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=80.80 E-value=0.73 Score=36.71 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=27.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
-|+|+|| |.+|++++-.+...|.+|+++++.+
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899997 9999998888888899999999754
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=80.49 E-value=0.74 Score=35.38 Aligned_cols=30 Identities=20% Similarity=0.079 Sum_probs=26.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEECC
Q 019012 161 VFVSAASGAVGQLVGQLAKLHGCYVVGSAGS 191 (347)
Q Consensus 161 vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~ 191 (347)
|+|+|| |+.|+.|+..|...|.+|.+++..
T Consensus 6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~ 35 (229)
T d3lada1 6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY 35 (229)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence 788896 999999999999999999999854
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=80.47 E-value=2.6 Score=30.20 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=48.7
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CC-EEEEEECChHhHHHHHHHcCCCeeeecCC
Q 019012 151 EVCSPKSGEYVFVSAASGAVGQLVGQLAKLH-GC-YVVGSAGSSQKVDLLKNKLGFDEAFNYND 212 (347)
Q Consensus 151 ~~~~~~~~~~vLI~Ga~g~~G~~ai~la~~~-G~-~V~~~~~~~~~~~~~~~~~g~~~vi~~~~ 212 (347)
..+++...+.+++.-..-..-..++..++.+ +. ++++.+.+++..+.++ ++|++.++++..
T Consensus 65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~Gad~vi~p~~ 127 (153)
T d1id1a_ 65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK-MVHPDIILSPQL 127 (153)
T ss_dssp HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH-TTCCSEEECHHH
T ss_pred HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHH-HCCCCEEECHHH
Confidence 5678888888888765566677788888776 33 8999999998889998 999999987743
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=80.40 E-value=1.1 Score=34.01 Aligned_cols=89 Identities=16% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEECChHhHHHHHHHcCCCeeeecCCHHHHHHHHHHHCCCCccEEEeC
Q 019012 155 PKSGEYVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYNDETDLVAALKRCFPQGIDIYFDN 234 (347)
Q Consensus 155 ~~~~~~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~i~~~~~g~~d~vid~ 234 (347)
+.++.+||=+|+ | .|..+..+ .++++++.++...+.++ +.+.. ++..... ++ ...++.||+|+..
T Consensus 34 ~~~~~~vLDiGc-G-~G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~-~~~~d~~-~l-----~~~~~~fD~I~~~ 98 (208)
T d1vlma_ 34 LLPEGRGVEIGV-G-TGRFAVPL-----KIKIGVEPSERMAEIAR-KRGVF-VLKGTAE-NL-----PLKDESFDFALMV 98 (208)
T ss_dssp HCCSSCEEEETC-T-TSTTHHHH-----TCCEEEESCHHHHHHHH-HTTCE-EEECBTT-BC-----CSCTTCEEEEEEE
T ss_pred hCCCCeEEEECC-C-Cccccccc-----ceEEEEeCChhhccccc-ccccc-ccccccc-cc-----ccccccccccccc
Confidence 356678999985 2 45554444 35789999999999988 65653 3322211 11 0112379999865
Q ss_pred CCh-------hhHHHHHHhhhcCCeEEEEcc
Q 019012 235 VGG-------EMLDAALLNMRDHGRIAVCGM 258 (347)
Q Consensus 235 ~g~-------~~~~~~~~~l~~~G~~v~~g~ 258 (347)
..- ..+++..+.|+++|+++....
T Consensus 99 ~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~ 129 (208)
T d1vlma_ 99 TTICFVDDPERALKEAYRILKKGGYLIVGIV 129 (208)
T ss_dssp SCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccccccchhhhhhcCCCCceEEEEec
Confidence 431 267889999999999887653
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=80.02 E-value=0.79 Score=37.34 Aligned_cols=32 Identities=22% Similarity=0.143 Sum_probs=27.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEECCh
Q 019012 160 YVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 192 (347)
Q Consensus 160 ~vLI~Ga~g~~G~~ai~la~~~G~~V~~~~~~~ 192 (347)
-|+|+|+ |..|+.++.-|...|++|++++..+
T Consensus 18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3899996 9999998888888999999998653
|