Citrus Sinensis ID: 019027

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA
ccccccHHHHHHHHcccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEEccccccccccccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccc
ccccccHHHHHHHHHccccccHHccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEcccccccccHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHcccc
MAAATTKLLLSDLAStvksvpsnyirpisdrpnltevqisdgsiplvdlqvlngpsrlDTIKQIGQACqhdgffqvrnhgipetiINNMLTIARAFfkspeserlksysddpskstrlstsfnvntekisnwRDYLRLHCyplqdymhewpsnppsfREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALgkhgqhmalnyyppcpqpdltyglpghtdpnlITVLLqddvpglqvlrngkwlpvspipntfivnIGDQMQVLSNDRYKSVLHRALVNcdkerisiptfycpspdaviapakdliderhpavyknfTYAEYYQKFWNRGLDERCLDLFKASTA
MAAATTKLLLSDLastvksvpsnyirpisdrpnLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESerlksysddpskstrlstsfnvntekisnwrdYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLrngkwlpvspiPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA
MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA
***********************YIRPI****NLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFF*************************NVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLF*****
*****TKLL*SDLASTVKSVPSNYIRPIS***********DGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLK*******KSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKAS**
MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSP******************STSFNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA
*****TKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKA***
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGLDERCLDLFKASTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query347 2.2.26 [Sep-21-2011]
Q05963356 Naringenin,2-oxoglutarate N/A no 0.870 0.848 0.371 3e-57
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.913 0.861 0.369 3e-57
Q05965357 Naringenin,2-oxoglutarate N/A no 0.922 0.896 0.360 9e-57
Q05964365 Naringenin,2-oxoglutarate N/A no 0.890 0.846 0.369 1e-56
P24397344 Hyoscyamine 6-dioxygenase N/A no 0.867 0.875 0.371 1e-56
Q9S818358 Naringenin,2-oxoglutarate no no 0.922 0.893 0.369 4e-56
P41090364 Naringenin,2-oxoglutarate no no 0.902 0.859 0.371 5e-56
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.896 0.922 0.358 6e-56
P28038377 Naringenin,2-oxoglutarate N/A no 0.953 0.877 0.348 7e-56
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.902 0.934 0.35 3e-55
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function desciption
 Score =  222 bits (566), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 181/312 (58%), Gaps = 10/312 (3%)

Query: 22  SNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQIGQACQHDGFFQVRNHGI 81
           + ++R   +RP +     S+  IP++ L  ++G  R +   +I +AC+  G FQV +HG+
Sbjct: 17  NKFVRDEDERPKVPYNTFSN-EIPVISLAGIDGCRRAEICDEIVKACEDWGIFQVVDHGV 75

Query: 82  PETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWRDYLRLHCY 141
              ++++M  +AR FF  P  E+L+ +     K      S ++  E + +WR+ +    Y
Sbjct: 76  DTKLLSDMTGLARDFFHLPTQEKLR-FDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSY 134

Query: 142 PLQ--DYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGKHGQ 199
           P++  DY   WP  P  +R V  EY   + GL  +LLE +SE++GL+++ + KA     Q
Sbjct: 135 PIKARDY-SRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQ 193

Query: 200 HMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRNG--KWLPVSPIPNTFI 257
            + +NYYP CPQPDLT GL  HTDP  IT+LLQD V GLQ  R+G   W+ V P+   F+
Sbjct: 194 KVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFV 253

Query: 258 VNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVY 317
           VN+GD    LSN R+K+  H+A+VN    R+SI TF  P+P+A++ P K  I+E   ++ 
Sbjct: 254 VNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLK--INEGEKSIM 311

Query: 318 KN-FTYAEYYQK 328
           +   T+ E Y+K
Sbjct: 312 EEPMTFMEMYKK 323
Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants.
Callistephus chinensis (taxid: 13379)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|P24397|HY6H_HYONI Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description
>sp|P41090|FL3H_VITVI Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|P28038|FL3H_HORVU Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
224115488350 predicted protein [Populus trichocarpa] 0.988 0.98 0.791 1e-164
224061517349 predicted protein [Populus trichocarpa] 0.982 0.977 0.781 1e-160
225426516348 PREDICTED: naringenin,2-oxoglutarate 3-d 0.994 0.991 0.748 1e-158
225426514348 PREDICTED: naringenin,2-oxoglutarate 3-d 1.0 0.997 0.735 1e-156
255555819346 1-aminocyclopropane-1-carboxylate oxidas 0.991 0.994 0.756 1e-155
225453648344 PREDICTED: hyoscyamine 6-dioxygenase [Vi 0.979 0.988 0.730 1e-150
255548069344 1-aminocyclopropane-1-carboxylate oxidas 0.979 0.988 0.722 1e-147
356559589345 PREDICTED: flavonol synthase/flavanone 3 0.982 0.988 0.704 1e-147
356520211345 PREDICTED: naringenin,2-oxoglutarate 3-d 0.982 0.988 0.698 1e-145
297809269351 predicted protein [Arabidopsis lyrata su 0.997 0.985 0.679 1e-145
>gi|224115488|ref|XP_002317046.1| predicted protein [Populus trichocarpa] gi|222860111|gb|EEE97658.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 273/345 (79%), Positives = 315/345 (91%), Gaps = 2/345 (0%)

Query: 3   AATTKLLLSDLAST-VKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTI 61
           A T KLLL+DLAS+ VK +PSN+IRPISDRPNL++VQISDGSIPL+DL+ L+GP+    I
Sbjct: 2   APTAKLLLADLASSGVKQIPSNFIRPISDRPNLSDVQISDGSIPLIDLRGLDGPNHSTII 61

Query: 62  KQIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTS 121
           +QIGQACQ DGFFQV+NHGIPE +I+ +L IAR FFK PESERLK+YSDDP+K+TRLSTS
Sbjct: 62  EQIGQACQRDGFFQVKNHGIPEEMISIILNIARQFFKLPESERLKNYSDDPTKTTRLSTS 121

Query: 122 FNVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISE 181
           FN+ TE++S+WRD+LRLHCYPL+DY+HEWPSNPPSFR+ VAEYCTSVRGLVLRLLEAISE
Sbjct: 122 FNIKTEQVSSWRDFLRLHCYPLEDYVHEWPSNPPSFRKDVAEYCTSVRGLVLRLLEAISE 181

Query: 182 SLGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVL 241
           SLGL+RD+IDK LG HGQHMA+NYYPPCPQP+LTYGLPGHTDPNLIT+LLQD VPGLQVL
Sbjct: 182 SLGLERDYIDKKLGGHGQHMAMNYYPPCPQPELTYGLPGHTDPNLITILLQDHVPGLQVL 241

Query: 242 RNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAV 301
           RNGKW+ V+PIPNTFIVNIGDQMQVLSNDRYKSVLHRA+VN DK+RISIPTFYCPSPDAV
Sbjct: 242 RNGKWIAVNPIPNTFIVNIGDQMQVLSNDRYKSVLHRAVVNSDKDRISIPTFYCPSPDAV 301

Query: 302 IAPAKDLIDERHPAVYKNFTYAEYYQKFWNRGL-DERCLDLFKAS 345
           I P K+L+D+ HPAVY++FTY EYY+KFWN+GL  E CLDLFK S
Sbjct: 302 IGPPKELVDDEHPAVYRDFTYGEYYEKFWNKGLVKECCLDLFKPS 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224061517|ref|XP_002300519.1| predicted protein [Populus trichocarpa] gi|222847777|gb|EEE85324.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225426516|ref|XP_002278004.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Vitis vinifera] gi|297742472|emb|CBI34621.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426514|ref|XP_002278024.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|255555819|ref|XP_002518945.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223541932|gb|EEF43478.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225453648|ref|XP_002267625.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis vinifera] gi|296089022|emb|CBI38725.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255548069|ref|XP_002515091.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223545571|gb|EEF47075.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356559589|ref|XP_003548081.1| PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Glycine max] Back     alignment and taxonomy information
>gi|356520211|ref|XP_003528757.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297809269|ref|XP_002872518.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297318355|gb|EFH48777.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query347
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.991 0.988 0.671 3.9e-131
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.988 0.982 0.653 3.7e-126
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.945 0.961 0.559 4.2e-102
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.902 0.855 0.404 2.9e-64
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.979 0.952 0.357 1.2e-58
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.890 0.832 0.404 6.6e-58
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.878 0.854 0.385 8.4e-58
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.925 0.909 0.377 4.2e-56
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.945 0.903 0.372 8.6e-56
TAIR|locus:2081008358 F3H "flavanone 3-hydroxylase" 0.922 0.893 0.369 1.6e-54
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
 Identities = 233/347 (67%), Positives = 284/347 (81%)

Query:     4 ATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIKQ 63
             A +KLL+SD+AS V  VPSNY+RP+SDRP ++EVQ S  SIPL+DL  L+GP+R D I Q
Sbjct:     2 AASKLLVSDIASVVDHVPSNYVRPVSDRPKMSEVQTSGDSIPLIDLHDLHGPNRADIINQ 61

Query:    64 IGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFN 123
                AC   GFFQ++NHG+PE  I  M+  AR FF+  ESER+K YS D  K+TRLSTSFN
Sbjct:    62 FAHACSSCGFFQIKNHGVPEETIKKMMNAAREFFRQSESERVKHYSADTKKTTRLSTSFN 121

Query:   124 VNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESL 183
             V+ EK+SNWRD+LRLHCYP++D+++EWPS P SFREV AEY TSVR LVL LLEAISESL
Sbjct:   122 VSKEKVSNWRDFLRLHCYPIEDFINEWPSTPISFREVTAEYATSVRALVLTLLEAISESL 181

Query:   184 GLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLRN 243
             GL +D +   +GKHGQHMA+NYYP CPQP+LTYGLPGH D NLITVLLQD+V GLQV ++
Sbjct:   182 GLAKDRVSNTIGKHGQHMAINYYPRCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFKD 241

Query:   244 GKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIA 303
             GKW+ V+P+PNTFIVN+GDQMQV+SN++YKSVLHRA+VN D ERISIPTFYCPS DAVI+
Sbjct:   242 GKWIAVNPVPNTFIVNLGDQMQVISNEKYKSVLHRAVVNSDMERISIPTFYCPSEDAVIS 301

Query:   304 PAKDLIDERH--PAVYKNFTYAEYYQKFWNRGLD-ERCLDLFKASTA 347
             PA++LI+E    PA+Y+NFTYAEY++KFW+   D E C+D FKASTA
Sbjct:   302 PAQELINEEEDSPAIYRNFTYAEYFEKFWDTAFDTESCIDSFKASTA 348
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081008 F3H "flavanone 3-hydroxylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
3rd Layer1.14.11.13LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 0.0
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-178
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-107
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-94
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-86
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-82
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-79
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 6e-79
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 6e-73
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-72
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 9e-72
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 4e-71
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-65
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-62
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 8e-60
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 4e-57
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-56
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 3e-56
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-53
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-47
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-45
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-40
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-39
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 5e-38
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-31
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-29
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-20
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-10
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  551 bits (1421), Expect = 0.0
 Identities = 237/348 (68%), Positives = 287/348 (82%), Gaps = 3/348 (0%)

Query: 3   AATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLVDLQVLNGPSRLDTIK 62
           +AT+KLL+SD+AS V  VPSNY+RP+SDRPN++EV+ S  SIPL+DL+ L+GP+R D I 
Sbjct: 1   SATSKLLVSDIASVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPNRADIIN 60

Query: 63  QIGQACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSF 122
           Q   AC   GFFQ++NHG+PE  I  M+ +AR FF   ESER+K YS D  K+TRLSTSF
Sbjct: 61  QFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSF 120

Query: 123 NVNTEKISNWRDYLRLHCYPLQDYMHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISES 182
           NV+ EK+SNWRD+LRLHCYP++D++ EWPS P SFREV AEY TSVR LVL LLEAISES
Sbjct: 121 NVSKEKVSNWRDFLRLHCYPIEDFIEEWPSTPISFREVTAEYATSVRALVLTLLEAISES 180

Query: 183 LGLQRDFIDKALGKHGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVLR 242
           LGL++D +   LGKHGQHMA+NYYPPCPQP+LTYGLPGH D NLITVLLQD+V GLQV +
Sbjct: 181 LGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFK 240

Query: 243 NGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVI 302
           +GKW+ V+PIPNTFIVN+GDQMQV+SND+YKSVLHRA+VN DKERISIPTFYCPS DAVI
Sbjct: 241 DGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVI 300

Query: 303 APAKDLIDERH--PAVYKNFTYAEYYQKFWNRGLD-ERCLDLFKASTA 347
            PA++LI+E     A+Y+NFTYAEY++KFW+     E C+D FKASTA
Sbjct: 301 GPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESCIDSFKASTA 348

Length = 348
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 347
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.87
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.78
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.95
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.77
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.35
TIGR02466201 conserved hypothetical protein. This family consis 80.06
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=2.5e-83  Score=612.65  Aligned_cols=335  Identities=31%  Similarity=0.647  Sum_probs=298.7

Q ss_pred             hHHHHHHc-CccCcCCCCCCcccCCCCCCCCCcc-cCCCCCCCceEeCCCCCCC-ChHHHHHHHHHHhhcccEEEEEccC
Q 019027            4 ATTKLLLS-DLASTVKSVPSNYIRPISDRPNLTE-VQISDGSIPLVDLQVLNGP-SRLDTIKQIGQACQHDGFFQVRNHG   80 (347)
Q Consensus         4 ~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~iPvIDl~~l~~~-~~~~~~~~l~~A~~~~Gff~l~nhG   80 (347)
                      .|+.|+.+ ++    +.||++|++|+++++.... .... .+||+|||+.+.++ .+.+++++|.+||++||||||+|||
T Consensus        16 ~~~~~~~~~~~----~~~p~~~v~p~~~~~~~~~~~~~~-~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHG   90 (357)
T PLN02216         16 SVQEMVKEKMI----TTVPPRYVRSDQDKTEIAVDSGLS-SEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHG   90 (357)
T ss_pred             hHHHHHhcCCC----CCCCHhhCcCcccCCccccccCcC-CCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCC
Confidence            38888876 65    8899999999999875411 0112 47999999998765 3467899999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCCCCCCCccccccCCCccccccccccccccCCccc-CCCCCCCCCchHH
Q 019027           81 IPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDY-MHEWPSNPPSFRE  159 (347)
Q Consensus        81 i~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~-~n~wP~~~~~fr~  159 (347)
                      |+.++++++++++++||+||.|+|+++.... ...+||+........+..||+|.|.+...|.... +|.||..+++||+
T Consensus        91 I~~~li~~~~~~~~~FF~LP~eeK~k~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~  169 (357)
T PLN02216         91 IDSSFLDKVKSEIQDFFNLPMEEKKKLWQRP-GEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRD  169 (357)
T ss_pred             CCHHHHHHHHHHHHHHHcCCHHHHHhhhcCC-CCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHH
Confidence            9999999999999999999999999987643 4578997554334455679999998766554333 7999998899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcC-cccceEEeecCCCCCCCCCcccCCccCCCceEEEec-CCCCC
Q 019027          160 VVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGK-HGQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQ-DDVPG  237 (347)
Q Consensus       160 ~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~G  237 (347)
                      .+++|+++|.+|+.+||++|+++||+++++|.+.+.. ..+.||+||||||+.++..+|+++|||+|+||||+| ++++|
T Consensus       170 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~G  249 (357)
T PLN02216        170 TLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEG  249 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCc
Confidence            9999999999999999999999999999999998876 457899999999999888999999999999999999 56999


Q ss_pred             ceeeeCCeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCCCCCeeEEeEeecCCCCceEecCCCccCCCCCCCC
Q 019027          238 LQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAVY  317 (347)
Q Consensus       238 LqV~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y  317 (347)
                      |||+++|+|++|+|+||++|||+||+||+||||+||||.|||+.++.++||||+||++|+.|++|.|+++|+++++|++|
T Consensus       250 LQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y  329 (357)
T PLN02216        250 LQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALF  329 (357)
T ss_pred             eeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCC
Confidence            99999999999999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CCccHHHHHHHHHHccCC-ccccccccc
Q 019027          318 KNFTYAEYYQKFWNRGLD-ERCLDLFKA  344 (347)
Q Consensus       318 ~~~~~~d~~~~~~~~~~~-~~~l~~~~~  344 (347)
                      ++++++||++.++.+.+. +..+|.+||
T Consensus       330 ~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        330 KSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            999999999999998887 888999886

>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-46
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-46
1w9y_A319 The Structure Of Acc Oxidase Length = 319 7e-45
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-44
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-24
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-15
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-14
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-14
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  181 bits (459), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 171/327 (52%), Gaps = 14/327 (4%)
Query: 15  STVKSVPSNYIRPISDRPNLTEV----QISDG-SIPLVDLQVLNGPS---RLDTIKQIGQ 66
           S + S+P  YIRP  +  ++ +V    +  DG  +P +DL+ +       R + I+++ +
Sbjct: 13  SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 72
Query: 67  ACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPS-KSTRLSTSFNVN 125
           A    G   + NHGIP  ++  +      FF     E+ K  +D  + K     +    N
Sbjct: 73  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN 132
Query: 126 TEKISNWRDYLRLHCYPLQDY-MHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLG 184
                 W DY     YP +   +  WP  P  + E  +EY   +R L  ++ +A+S  LG
Sbjct: 133 ASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG 192
Query: 185 LQRDFIDKALGKHGQ---HMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVL 241
           L+ D ++K +G   +    M +NYYP CPQP+L  G+  HTD + +T +L + VPGLQ+ 
Sbjct: 193 LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 252
Query: 242 RNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA- 300
             GKW+    +P++ +++IGD +++LSN +YKS+LHR LVN +K RIS   F  P  D  
Sbjct: 253 YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKI 312
Query: 301 VIAPAKDLIDERHPAVYKNFTYAEYYQ 327
           V+ P  +++    PA +   T+A++ +
Sbjct: 313 VLKPLPEMVSVESPAKFPPRTFAQHIE 339
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query347
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-161
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-150
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-111
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-99
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-99
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-95
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  454 bits (1169), Expect = e-161
 Identities = 102/337 (30%), Positives = 173/337 (51%), Gaps = 15/337 (4%)

Query: 15  STVKSVPSNYIRPISDRPNLTEVQISDG-----SIPLVDLQVLNGPS---RLDTIKQIGQ 66
           S + S+P  YIRP  +  ++ +V + +       +P +DL+ +       R + I+++ +
Sbjct: 13  SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 72

Query: 67  ACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRL-STSFNVN 125
           A    G   + NHGIP  ++  +      FF     E+ K  +D  +   +   +    N
Sbjct: 73  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN 132

Query: 126 TEKISNWRDYLRLHCYPLQDY-MHEWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLG 184
                 W DY     YP +   +  WP  P  + E  +EY   +R L  ++ +A+S  LG
Sbjct: 133 ASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG 192

Query: 185 LQRDFIDKALGKH---GQHMALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVL 241
           L+ D ++K +G        M +NYYP CPQP+L  G+  HTD + +T +L + VPGLQ+ 
Sbjct: 193 LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 252

Query: 242 RNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA- 300
             GKW+    +P++ +++IGD +++LSN +YKS+LHR LVN +K RIS   F  P  D  
Sbjct: 253 YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKI 312

Query: 301 VIAPAKDLIDERHPAVYKNFTYAEYY-QKFWNRGLDE 336
           V+ P  +++    PA +   T+A++   K + +  +E
Sbjct: 313 VLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 349
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query347
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.93
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 95.3
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 92.47
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 84.14
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 83.28
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 82.77
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 81.03
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-83  Score=612.92  Aligned_cols=328  Identities=31%  Similarity=0.587  Sum_probs=296.0

Q ss_pred             hhHHHHHHcCccCcCCCCCCcccCCCCCCCCCcc---cC---CCCCCCceEeCCCCCCC---ChHHHHHHHHHHhhcccE
Q 019027            3 AATTKLLLSDLASTVKSVPSNYIRPISDRPNLTE---VQ---ISDGSIPLVDLQVLNGP---SRLDTIKQIGQACQHDGF   73 (347)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~---~~~~~iPvIDl~~l~~~---~~~~~~~~l~~A~~~~Gf   73 (347)
                      ++||+|+++|+    ++||++|++|+++++....   ..   .. .+||||||+.+.++   .+.+++++|.+||++|||
T Consensus         5 ~~v~~l~~~~~----~~vP~~~~~p~~~~~~~~~~~~~~~~~~~-~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GF   79 (356)
T 1gp6_A            5 ERVESLAKSGI----ISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGV   79 (356)
T ss_dssp             CCHHHHHHTTC----SSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred             ccHHHHHhcCC----CCCCHHhcCCchhcccccccccccccccC-CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCE
Confidence            57999999996    8999999999887775321   00   12 46999999998754   356789999999999999


Q ss_pred             EEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCC-CCCCCCccccccCCCccccccccccccccCCccc-CCCCC
Q 019027           74 FQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDP-SKSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDY-MHEWP  151 (347)
Q Consensus        74 f~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~-~n~wP  151 (347)
                      |||+||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|+|.++..|.... +|.||
T Consensus        80 F~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP  159 (356)
T 1gp6_A           80 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP  159 (356)
T ss_dssp             EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCC
Confidence            999999999999999999999999999999999987654 4688997654444556789999999987664323 68999


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhc---CcccceEEeecCCCCCCCCCcccCCccCCCceE
Q 019027          152 SNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALG---KHGQHMALNYYPPCPQPDLTYGLPGHTDPNLIT  228 (347)
Q Consensus       152 ~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT  228 (347)
                      +.+++||+.+++|++.|.+|+.+||++|+++||+++++|.+.+.   .+.+.||++|||||+.++..+|+++|||+|+||
T Consensus       160 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT  239 (356)
T 1gp6_A          160 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT  239 (356)
T ss_dssp             CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence            99999999999999999999999999999999999999999987   467789999999999988899999999999999


Q ss_pred             EEecCCCCCceeeeCCeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCCCCCeeEEeEeecCCCCc-eEecCCC
Q 019027          229 VLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA-VIAPAKD  307 (347)
Q Consensus       229 lL~qd~~~GLqV~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~  307 (347)
                      ||+||+++||||+++|+|++|+|+||++|||+||+||+||||+||||.|||+.+++.+|||++||++|+.|+ +|.|+++
T Consensus       240 lL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~  319 (356)
T 1gp6_A          240 FILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  319 (356)
T ss_dssp             EEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             EEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence            999999999999999999999999999999999999999999999999999998888999999999999999 9999999


Q ss_pred             ccCCCCCCCCCCccHHHHHHHHHHccCC
Q 019027          308 LIDERHPAVYKNFTYAEYYQKFWNRGLD  335 (347)
Q Consensus       308 ~~~~~~p~~y~~~~~~d~~~~~~~~~~~  335 (347)
                      |+++++|++|+++|++||+..+++++++
T Consensus       320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~d  347 (356)
T 1gp6_A          320 MVSVESPAKFPPRTFAQHIEHKLFGKEQ  347 (356)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHHHHHH
T ss_pred             hcCCCCCccCCCccHHHHHHHHHHhccC
Confidence            9999999999999999999999888776
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 347
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-79
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 4e-76
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 9e-64
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 6e-53
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  244 bits (623), Expect = 2e-79
 Identities = 98/337 (29%), Positives = 171/337 (50%), Gaps = 15/337 (4%)

Query: 15  STVKSVPSNYIRPISDRPNLTEVQISDGS-----IPLVDLQVLNGPS---RLDTIKQIGQ 66
           S + S+P  YIRP  +  ++ +V + +       +P +DL+ +       R + I+++ +
Sbjct: 12  SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 71

Query: 67  ACQHDGFFQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPSKSTRLSTSFNVNT 126
           A    G   + NHGIP  ++  +      FF     E+ K  +D  +   +   S   N 
Sbjct: 72  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN 131

Query: 127 EKISNWRDYLRLHCYPLQDYMH--EWPSNPPSFREVVAEYCTSVRGLVLRLLEAISESLG 184
                  +    H    ++      WP  P  + E  +EY   +R L  ++ +A+S  LG
Sbjct: 132 ASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG 191

Query: 185 LQRDFIDKALGKHGQH---MALNYYPPCPQPDLTYGLPGHTDPNLITVLLQDDVPGLQVL 241
           L+ D ++K +G   +    M +NYYP CPQP+L  G+  HTD + +T +L + VPGLQ+ 
Sbjct: 192 LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 251

Query: 242 RNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAV 301
             GKW+    +P++ +++IGD +++LSN +YKS+LHR LVN +K RIS   F  P  D +
Sbjct: 252 YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKI 311

Query: 302 I-APAKDLIDERHPAVYKNFTYAEYY-QKFWNRGLDE 336
           +  P  +++    PA +   T+A++   K + +  +E
Sbjct: 312 VLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 348
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query347
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.28
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 83.45
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.5e-79  Score=581.46  Aligned_cols=325  Identities=31%  Similarity=0.600  Sum_probs=285.4

Q ss_pred             hhHHHHHHcCccCcCCCCCCcccCCCCCCCCCccc------CCCCCCCceEeCCCCCCC---ChHHHHHHHHHHhhcccE
Q 019027            3 AATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEV------QISDGSIPLVDLQVLNGP---SRLDTIKQIGQACQHDGF   73 (347)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~~~iPvIDl~~l~~~---~~~~~~~~l~~A~~~~Gf   73 (347)
                      +.||+|+++|+    ++||+.|++|+++++.+...      ... .+||||||+.|.++   .+.+++++|.+||+++||
T Consensus         4 ~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GF   78 (349)
T d1gp6a_           4 ERVESLAKSGI----ISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGV   78 (349)
T ss_dssp             CCHHHHHHTTC----SSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred             cchHHHHhCCC----ccCCHhhcCChhhcCCCCccccccccCCC-CCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCE
Confidence            57999999998    99999999999998876321      123 68999999999866   467889999999999999


Q ss_pred             EEEEccCCCHHHHHHHHHHHHHhhCCCHHHHhhcCCCCCC-CCCCCccccccCCCccccccccccccccCCccc-CCCCC
Q 019027           74 FQVRNHGIPETIINNMLTIARAFFKSPESERLKSYSDDPS-KSTRLSTSFNVNTEKISNWRDYLRLHCYPLQDY-MHEWP  151 (347)
Q Consensus        74 f~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~-~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~-~n~wP  151 (347)
                      |||+||||+.++++++++++++||+||.|+|+++...... ++.||+...........++.+.+.....+.... +|.||
T Consensus        79 f~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp  158 (349)
T d1gp6a_          79 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP  158 (349)
T ss_dssp             EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccc
Confidence            9999999999999999999999999999999999875433 244555444444555566666554333333222 68999


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcC---cccceEEeecCCCCCCCCCcccCCccCCCceE
Q 019027          152 SNPPSFREVVAEYCTSVRGLVLRLLEAISESLGLQRDFIDKALGK---HGQHMALNYYPPCPQPDLTYGLPGHTDPNLIT  228 (347)
Q Consensus       152 ~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~f~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT  228 (347)
                      ...+.|++.+++|+++|.+++.+|+++++++||+++++|.+.+..   ..+.+|++|||+++.+...+|+++|||+|+||
T Consensus       159 ~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lT  238 (349)
T d1gp6a_         159 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT  238 (349)
T ss_dssp             CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred             cccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceE
Confidence            999999999999999999999999999999999999999988743   55689999999999988899999999999999


Q ss_pred             EEecCCCCCceeeeCCeEEEccCCCCeEEEEeChhhHHhhCCcccCccccccCCCCCCeeEEeEeecCCCCceE-ecCCC
Q 019027          229 VLLQDDVPGLQVLRNGKWLPVSPIPNTFIVNIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVI-APAKD  307 (347)
Q Consensus       229 lL~qd~~~GLqV~~~g~W~~v~p~pg~~vVnvGd~l~~~TnG~~~st~HRV~~~~~~~R~Si~~F~~P~~d~~i-~pl~~  307 (347)
                      ||+|+.++||||+++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++++||||+||++|+.|++| +|+++
T Consensus       239 lL~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~  318 (349)
T d1gp6a_         239 FILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  318 (349)
T ss_dssp             EEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             EEeccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHH
Confidence            99999999999999999999999999999999999999999999999999999888999999999999999865 89999


Q ss_pred             ccCCCCCCCCCCccHHHHHHHHHHc
Q 019027          308 LIDERHPAVYKNFTYAEYYQKFWNR  332 (347)
Q Consensus       308 ~~~~~~p~~y~~~~~~d~~~~~~~~  332 (347)
                      |+++++|++|+|+|++||++.++..
T Consensus       319 ~v~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         319 MVSVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             GCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCccHHHHHHHHHhc
Confidence            9999999999999999999998854
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure